mRNA_P-littoralis_Contig77.146.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: A0A6H5KUD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUD6_9PHAE) HSP 1 Score: 364 bits (934), Expect = 5.970e-117 Identity = 199/268 (74.25%), Postives = 217/268 (80.97%), Query Frame = 3
Query: 42 YCYAHGLLAPLAGLLVLTSSRCSAFVGPVAISKGSQQHVS---SGRIYSA--------FRARETGPERSSG---RLRMQSAPPAAGAAAVKTIEDAQSIIVKAAETRDVDPDTVIEAIRLIEKTGGSKKPLMGRKSAQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPDYTITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGLNFPYNQGESKVQPGFTFMDISDRYVIARGAGGGLALWLRQDTV 803
YC AHG +APL GLL+L +S AFV P ++ +S S R +SA A G RS R RMQ AP AAA++TIEDAQ++IV+AAETRDVDPDTVIEAIRLIEK+GGSKKPL GR S+QPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPDYTITNGVYLGSFPVLKFSGTFTWAEE +RLEFTF+++GVLGLNFPYNQGESKV PGFTFMDISDRYVIARGAGGGLALWLRQDTV
Sbjct: 4 YC-AHGTIAPLVGLLLLMASYSEAFVTPTLSQARARLMISADVSRRSHSAAFESSWPRLPAARAGRGRSGSGGLRPRMQGAP---AAAALETIEDAQTVIVRAAETRDVDPDTVIEAIRLIEKSGGSKKPLEGRDSSQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPDYTITNGVYLGSFPVLKFSGTFTWAEETARLEFTFNEVGVLGLNFPYNQGESKVPPGFTFMDISDRYVIARGAGGGLALWLRQDTV 267
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: A0A7S3XXW0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXW0_HETAK) HSP 1 Score: 140 bits (353), Expect = 4.010e-35 Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 3
Query: 423 DLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPDYT-ITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGLNFPYNQGES-KVQPGFTFMDISDRYVIARGAGGGLALWLR 791
DL +G W+L+FTTGD KT+K G +I+Y P+KAVQ F+ ITNG++LG F +LKF GTFTW +E++RLEF FD++ VLGL F + Q E KV P F F+ I ++ V+ARGAGGGLALW R
Sbjct: 19 DLERVSGCWQLVFTTGDKKTEKNFG-RINYFPVKAVQCFDAQTMGITNGIFLGDFALLKFFGTFTWIDERTRLEFDFDKVAVLGLEFGFGQKEPPKVPPAFNFIAIEEKIVVARGAGGGLALWRR 142
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: A0A7S2UXG6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXG6_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.810e-34 Identity = 85/194 (43.81%), Postives = 110/194 (56.70%), Query Frame = 3
Query: 276 IEDAQSIIVKAAETRDVDPDTVIEAIRLIEKTGGSKKPLMGRKSAQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNP-DYTITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGL---NFPYNQG------------------ESKVQPGFTFMDISDRYVIARGAGGGLALWLR 791
IE + S++ KAA T+ DPD VIEA+ +EK L +++ L NG+WRLIFTTG TQKKLG K++Y PIKAVQ FN D++I NGVYLG F ++KF G F W E+ RLEF FD+I +LGL N P ++ +P F ++ +D ARG GGGLALW R
Sbjct: 76 IESSTSMLQKAAMTKKEDPDQVIEALLNLEKLQRKLNKLDDGATSRETLQKL--NGSWRLIFTTGTADTQKKLGRKVNYFPIKAVQSFNTTDFSIENGVYLGDFSLIKFGGDFEWIEKPRRLEFDFDRISLLGLPAFNLPKGGAAEIGKSTGLGAERNVEMVKAGAKPFFNWISANDEIATARGGGGGLALWKR 267
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: A0A7S2WPX1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPX1_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.440e-29 Identity = 76/192 (39.58%), Postives = 103/192 (53.65%), Query Frame = 3
Query: 282 DAQSIIVKAAETRDVDPDTVIEAIRLIEKTGGSKKPLMGRKSAQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPD-YTITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGLNFPYNQG--------------------ESKVQPGFTFMDISDRYVIARGAGGGLALWLRQ 794
D +V+AAETR D D V+EA+ +EK + + + L + NG WRL+FTTG V +QKK+GG+I+Y PIKAVQ F+ +TNG+YLG+FP+LKF G F + +LEF F +I VLG +G E+ +P F ++ R ARG GGGLALW R
Sbjct: 65 DLVETLVRAAETRAEDSDVVLEALLDLEK---GMRTIAREDPTAAEATLSSLNGAWRLVFTTGTVDSQKKIGGRINYFPIKAVQCFDTSTMRLTNGIYLGTFPILKFFGPFEFNLASRKLEFDFTEIAVLGFRVGLGKGGASDIGSKTGLGSENNKKLVEAGKKPFFNWISADRRIATARGGGGGLALWARD 253
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: A0A7S4DT06_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DT06_9EUKA) HSP 1 Score: 130 bits (327), Expect = 3.860e-28 Identity = 69/184 (37.50%), Postives = 101/184 (54.89%), Query Frame = 3
Query: 285 AQSIIVKAAETRDVDPDTVIEAIRLIEKTGGSKKPLMGRKSAQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPDYTITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGLNFP-------------YNQGESKVQPGFTFMDISDRYVIARGAGGGLALWLRQD 797
A S++ AA+ RDVDPD V AIR +E+ + + LL G W+L+FTTG KTQ+ G I+Y P+KA+Q F ITNG++ G P+ + GT+ W +SRLEF F+ + G+ P + + QP F F+ + D+ ++ARGAGGG+ALW+R+D
Sbjct: 356 ALSVLRDAAQDRDVDPDQVYAAIRALERE-------------KLQVPLLAVKGTWKLVFTTGTAKTQRDFG-PINYFPVKAIQTFGDGDVITNGIFAGPLPLFRLKGTYKWLAFRSRLEFDFNDVEAFGVYTPELPDPLRSILGLKVDGKDYNKQPAFNFIAVDDKVLVARGAGGGVALWVRED 525
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: A0A7S0EPI4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EPI4_9EUKA) HSP 1 Score: 121 bits (304), Expect = 3.810e-27 Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 3
Query: 273 TIEDAQSIIVKAAETRDVDPDTVIEAIRLIEKTGGSKKPLMGRKSAQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPDYT-ITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGL---NFPYNQGES--------------KVQPG----FTFMDISDRYVIARGAGGGLALWLRQ 794
+++ A ++ AA +R+ DPDTV E + +EK G + + L + +G WRL+FTTG V+ Q KLG K+ Y P++A Q F+ ITNG+Y+GSF +++F G+F W EE+ R+EF FD+I VLGL + P E + + G F ++ ARG GGGLALW R
Sbjct: 55 SVDSALALCRVAATSREADPDTVCEEMLTVEK--GMRDTAKDDGGELSRSTLQSLDGAWRLVFTTGTVEMQSKLGRKVDYFPLRATQTFDTKTNAITNGIYIGSFALVRFFGSFEWLEERRRVEFDFDRIAVLGLPAFDLPKGGAEELGAATGLGAKSNVKRAEDGKKAFFNWISADAEIATARGGGGGLALWQRD 248
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: K0TFX7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TFX7_THAOC) HSP 1 Score: 123 bits (308), Expect = 1.550e-26 Identity = 79/202 (39.11%), Postives = 114/202 (56.44%), Query Frame = 3
Query: 276 IEDAQSIIVKAAETRDVDPDTVIEAIRLIEKTGGSKKPLMGRKSAQPKF--DLLTD-NGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPDYT---ITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGLNFPYNQGESKV-QPG---------------------FTFMDISDRYVIARGAGGGLALWLRQD 797
IE+++ ++++AA T++ +P V+EA+ IE+ S+ K KF D+L + +G+WRLIFTTG + Q++ GG+I+Y KAVQ F D T I NG+Y+G FP++KFSG + W E +LEF FD+I +LGL N G +V Q G FT++ D ARG GGGLALW R +
Sbjct: 187 IEESKQLLLRAATTKEENPSDVLEALESIERDCRSRF-----KEDPAKFSEDILNNISGDWRLIFTTGTKEQQERRGGRINYFSPKAVQSFRADTTPKQIENGIYVGDFPLVKFSGDWEWNERVRKLEFDFDKIQLLGL-ISINLGRKEVAQIGSASGLGSKNNEKLAAEGKKAFFTWISADDNIATARGGGGGLALWKRVE 382
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: A0A7S2JZY1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZY1_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.920e-26 Identity = 73/196 (37.24%), Postives = 104/196 (53.06%), Query Frame = 3
Query: 276 IEDAQSIIVKAAETRDVDPDTVIEAIRLIEKTGGSKKPLMGRKSAQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGK-ISYVPIKAVQVFNPD---YTITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGLNFPYNQGES--------------------KVQPGFTFMDISDRYVIARGAGGGLALWLR 791
I++A ++ KAAET++ DPD+V++A+ +E +K + A L G WRLIFTTG +QKKLGGK I+Y PIKAVQ F+P I NG+Y+G F V+KF G F + + +LEF FD+I VLG + +G++ K +P F ++ + ARG ALW R
Sbjct: 15 IQNALEVLYKAAETKNEDPDSVVDALESLENL--MRKKCLAEDDAAANV-LANLEGEWRLIFTTGTQDSQKKLGGKKINYFPIKAVQEFDPTADPMQIRNGIYVGDFAVIKFFGDFEFNLKSRKLEFDFDKISVLGFSIDLGKGKAAEIGAASGLGAESNVELAKKKKKPFFNWISADENIATARGGXXXXALWKR 207
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: A0A7S2TG87_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TG87_9EUKA) HSP 1 Score: 118 bits (295), Expect = 3.160e-26 Identity = 69/182 (37.91%), Postives = 100/182 (54.95%), Query Frame = 3
Query: 303 KAAETRDVDPDTVIEAIRLIEKTGGSKKPLMGRKSAQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPD---YTITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGLNFP---------------YNQGESKVQPGFTFMDISDRYVIARGAGGGLALWLRQ 794
+AA RD+DP +V+EAI +EK+ KP +AQ + +G+WRL+FTTGDVKTQKK+GG YVPIKAVQ F+ Y I NGVY G PV++F G F W +S L++ F+ + + G + Y + + +P F ++ I D +AR G +A+W +
Sbjct: 60 RAAAKRDIDPSSVLEAIYYLEKS----KP-----AAQRAIPVSKLSGSWRLVFTTGDVKTQKKMGGTFDYVPIKAVQTFDDSSEPYRIENGVYWGDNPVVRFRGVFRWLPNRSGLKWQFNHVQLFGKDIEVPDEWKAAVGMRPEGYQAKKYEKEPFFNWIYIDDEIAVARATG--VAIWRKH 230
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Match: A0A813D251_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D251_POLGL) HSP 1 Score: 114 bits (285), Expect = 1.270e-24 Identity = 74/193 (38.34%), Postives = 106/193 (54.92%), Query Frame = 3
Query: 276 IEDAQSIIVKAAETRDVDPDTVIEAIRLIEKTGGSKKPLMGRKSAQPKFDLLTDNGNWRLIFTTGDVKTQKKLGGKISYVPIKAVQVFNPDYT-ITNGVYLGSFPVLKFSGTFTWAEEKSRLEFTFDQIGVLGLNF----------------PYNQGESKVQPGFTFMDISDRYVIARGAGGGLALWLRQDTV 803
++ + SI+ ++A T++ P+ V EAIR++EK R LLT G WRLI+TTG KT++++G +ISYVPI AVQ F+ + I NG+YLG L+F GT W E R+EF F+ + + G + PY K QP F F+ + ++ ARGAGGG+ALWLR + V
Sbjct: 82 LQKSLSILAESALTKNTPPEEVYEAIRVLEKA-------KDRDGDSGFEQLLT--GEWRLIYTTGTKKTEEEVG-RISYVPITAVQRFDMGKSLIRNGIYLGPLS-LEFEGTLRWIEATRRMEFDFEDLKICGSSVLLPDWLRAMAGMRSSTPY-----KKQPAFNFVAVDEKIAAARGAGGGVALWLRNELV 258 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.146.1 >prot_P-littoralis_Contig77.146.1 ID=prot_P-littoralis_Contig77.146.1|Name=mRNA_P-littoralis_Contig77.146.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=257bp MRYCYAHGLLAPLAGLLVLTSSRCSAFVGPVAISKGSQQHVSSGRIYSAFback to top mRNA from alignment at P-littoralis_Contig77:604734..615778+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.146.1 ID=mRNA_P-littoralis_Contig77.146.1|Name=mRNA_P-littoralis_Contig77.146.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11045bp|location=Sequence derived from alignment at P-littoralis_Contig77:604734..615778+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:604734..615778+ >mRNA_P-littoralis_Contig77.146.1 ID=mRNA_P-littoralis_Contig77.146.1|Name=mRNA_P-littoralis_Contig77.146.1|organism=Pylaiella littoralis U1_48|type=CDS|length=771bp|location=Sequence derived from alignment at P-littoralis_Contig77:604734..615778+ (Pylaiella littoralis U1_48)back to top |