mRNA_P-littoralis_Contig769.59.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig769.59.2
Unique NamemRNA_P-littoralis_Contig769.59.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 453 bits (1165), Expect = 4.820e-156
Identity = 231/375 (61.60%), Postives = 281/375 (74.93%), Query Frame = 1
Query:    1 AALHHSEQHD-RQTRVRSMAQWAVVLEELGAATLWREEDDDDDVS-RAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 1119
            AALH  ++ D R+   RS++ W  VL +  +      ED+++ V  + KRTR + +R++W+ SAWW +LQ+ +LA  T+ AAKVFRERFRVP+ FF  LV+LSR K+WFS G  DAA REGIP+ELK+L      G+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEG PT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LIVDNGY+E              +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct:   18 AALHQIQEEDGRRRTARSVSYWDAVLFDEDS------EDEEEVVGPKVKRTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 453 bits (1165), Expect = 2.340e-154
Identity = 220/389 (56.56%), Postives = 288/389 (74.04%), Query Frame = 1
Query:   34 QTRVRSMAQWAVVLEELGAATLWREEDDDDDVSRAKRTRCIKERKNWKQSAWWTQLQE-EELAV-----PTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1182
            Q + R++  W +VL++L       EE+++D  +R  + R +  RK++  S W  QLQE ++L V     PTS  A+ FRE FR+P+ FF+ LV L +++ WF  G  DA+GR GIPV+LK+L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG PT+A++VTVDH  R + VT GFTG+TNDK+ +RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LE+VRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+
Sbjct:   41 QQQQRTLVAWDLVLDDLDELDPDSEEEEED--NREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHN 427          
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 1.640e-145
Identity = 211/388 (54.38%), Postives = 270/388 (69.59%), Query Frame = 1
Query:   46 RSMAQWAVVLEELGAATLWREEDD------DDDVSRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDA---AKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1182
            RS+A W V++E+         EDD      DD+ SR  + R +  RK++ +S WW +L E      T      A+ FR  FRVP+ FF+ LVEL R++ WF  G +D  GR+ +PVELK+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:   64 RSVAVWDVIMEDF--------EDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443          
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 1.730e-135
Identity = 247/553 (44.67%), Postives = 302/553 (54.61%), Query Frame = 1
Query:    1 AALHHSEQHDRQTRV-RSMAQWAVVLEELGAATLWREEDDDDDVS-RAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQI---------------------------LGRGNCFDDI---------------SQLSLMSKSMAAATF---------------------------------HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1182
            AALH  +  D   R  RS++ W  VL +  +      ED+++ V  +AKRTR + +R++W+ SAWW QLQ  +LA  T+ AA VFR RFRVP+ FF  LV+LSR K+WFS G  D A REGIP+ELK+ T+  +                           L  G   D++               + ++ +  +M   T                                  HKFC++FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEG PT+A EVTVDHAGRA+ VT GFTGATNDKT +RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:   18 AALHQIQGEDGCRRTARSVSYWDAVLFDEDS------EDEEEVVGPKAKRTRRVTQRRDWRTSAWWEQLQHVDLADHTTAAATVFRGRFRVPYPFFQNLVKLSRAKRWFSPGEKDTANREGIPLELKLRTSTPVEDEQVDGTSNHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 564          
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 3.000e-135
Identity = 195/341 (57.18%), Postives = 245/341 (71.85%), Query Frame = 1
Query:  157 KERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAG 1173
            ++RK  ++ AW   L++++L    S ++K FR  FRVP +FFLRLV L + K WF+  G DAA R+  PVE K+L  L ILGRGNCF  I Q+S MS       FHKFCK+FA+EM++EHIYLP+      D VM  Y +LGF+GA+GS DVTH+GW  CP+ L RS+TGKEGVPT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR +  Y ++ + +   DGT  T KGCYL+VDNGYH+W  LM P+KYP   +D  FSK LE+VRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILHNMLH+FDGM    EN  W  SAG
Sbjct:   26 RKRKEVEKCAWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366          
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 8.130e-135
Identity = 186/264 (70.45%), Postives = 216/264 (81.82%), Query Frame = 1
Query:  391 QILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1182
            Q+LG+GNCFDD+ QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEG PT+A++VTVDH GR + VT GFTGATNDKT +RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D AFS+ LE+VRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 297          
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 4.880e-132
Identity = 195/335 (58.21%), Postives = 239/335 (71.34%), Query Frame = 1
Query:  184 AWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1182
            AW   L++E+L  PTS AAK FRE FRVP+ FFLRLVEL ++K WF+    DA GR   PVE K+L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKT +  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LE+VRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNMLH+ DGM   +E+V+W GSA L +
Sbjct:   64 AWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN 398          
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 1.330e-122
Identity = 189/356 (53.09%), Postives = 231/356 (64.89%), Query Frame = 1
Query:  199 LQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGL 1176
            L++++L   TS  AK  R  FRVP+  FLRLV L + K WFS    DA G    PVE K+L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEG PT+A++VTVDHAGRAI VT+GFTG+TNDKT V +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+W  L+ PSKYP   +D  FSK LE+VRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILHNMLH+FDGM    EN +W  SAG+
Sbjct:   27 LEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382          
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 1.150e-121
Identity = 209/424 (49.29%), Postives = 243/424 (57.31%), Query Frame = 1
Query:    1 AALHHSEQHDRQTRVRSMAQWAVVLEELGAATLWREEDDDDDVSRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELK--------------------------------------------------------------------------------------------------------------ILTALQILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGD 942
            +ALH  +Q  R  R  ++AQWAV L     A  W E+  + D    KR+R +KER++W  SAWW QLQ  +L   T++AAKVFR RFRVPHAFFL LV+++R KKWFS    DA GR GIP+ELK                                                                                                              ILTALQILGRGNCFDDI QLSLMSK MAAATFHKFCK+FA+E+FEEHIYLPTG+YQDEVM  Y KLG TGAIGSTDVTH+GWGMCPFTLGRS+TGKEG PT+A++VTVDHAGRAI +T GFTGATNDKT +RYDA V TI+ +  Y  R YKLR+ADGT   RKGCY IVDNGYHE  +L  P++   D
Sbjct:   19 SALHQVQQRSRTHR--TLAQWAVALRAFDDAFEW-EDSGEQDGPPVKRSRQVKERRDWSTSAWWLQLQNADLLDHTTEAAKVFRTRFRVPHAFFLELVKMARGKKWFSVREKDAVGRRGIPIELKLSSYRSGLLLLVVNCSDVPSIEPMRWIVVHNFTRWYRRVHSSTAVVAEHGSMGNVPCTVTRTSHRWHRKYCCRRPTAREKRRTLWFRLHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHEVNSLGHPNRMRED 439          
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 6.460e-118
Identity = 165/274 (60.22%), Postives = 206/274 (75.18%), Query Frame = 1
Query:  361 PVELKILTALQILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1182
            P   ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig769.59.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSI7_9PHAE4.820e-15661.60DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JAU4_9PHAE2.340e-15456.56Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.640e-14554.38Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE1.730e-13544.67DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE3.000e-13557.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE8.130e-13570.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE4.880e-13258.21Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.330e-12253.09DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JCU6_9PHAE1.150e-12149.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE6.460e-11860.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig769contigP-littoralis_Contig769:126788..129383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1184
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.54e-96
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size1182
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791584.5609975-CDS-P-littoralis_Contig769:126787..1271621680791584.5609975-CDS-P-littoralis_Contig769:126787..127162Pylaiella littoralis U1_48CDSP-littoralis_Contig769 126788..127162 +
1680791584.6121507-CDS-P-littoralis_Contig769:128004..1285321680791584.6121507-CDS-P-littoralis_Contig769:128004..128532Pylaiella littoralis U1_48CDSP-littoralis_Contig769 128005..128532 +
1680791584.6791966-CDS-P-littoralis_Contig769:129104..1293831680791584.6791966-CDS-P-littoralis_Contig769:129104..129383Pylaiella littoralis U1_48CDSP-littoralis_Contig769 129105..129383 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig769.59.2prot_P-littoralis_Contig769.59.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig769 126788..129383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig769.59.2

>prot_P-littoralis_Contig769.59.2 ID=prot_P-littoralis_Contig769.59.2|Name=mRNA_P-littoralis_Contig769.59.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=394bp
AALHHSEQHDRQTRVRSMAQWAVVLEELGAATLWREEDDDDDVSRAKRTR
CIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVEL
SREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDISQLSLMSK
SMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGST
DVTHVGWGMCPFTLGRSFTGKEGVPTLAFEVTVDHAGRAIGVTQGFTGAT
NDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYH
EWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLA
YHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD
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mRNA from alignment at P-littoralis_Contig769:126788..129383+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig769.59.2 ID=mRNA_P-littoralis_Contig769.59.2|Name=mRNA_P-littoralis_Contig769.59.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2596bp|location=Sequence derived from alignment at P-littoralis_Contig769:126788..129383+ (Pylaiella littoralis U1_48)
GCCGCTCTCCACCACAGCGAGCAGCACGATCGACAAACACGCGTGCGCTC GATGGCACAGTGGGCTGTTGTACTCGAGGAGTTGGGTGCTGCTACTTTGT GGCGAGAGGAGGATGATGACGACGACGTGTCGCGTGCGAAGCGGACGAGA TGCATCAAGGAGCGAAAGAACTGGAAGCAGTCTGCCTGGTGGACGCAACT TCAGGAGGAAGAACTTGCCGTGCCCACGTCCGATGCGGCGAAGGTATTCC GAGAGCGCTTTCGCGTGCCTCACGCCTTCTTCCTGAGGTTGGTGGAGCTG TCGAGGGAGAAGAAGTGGTTCTCAGACGGAGGAGCGGATGCAGCAGGCCG TGAGGGTATCCCAGTAGAGCTCAAGGTGCGCTTGAAAATGACACTTCGCA CGAAGCATAACATACTGGAAAATAATATAGATGGTGTGTGTACAAGTATA AAATACAGCAGCTTTCCACTGCTGTACGTCACACAACTGCTGTCCACAGA CCGCCGTCCCCCTCATGACTGCAGCACAACTGCTGCGCCTGACGAAAGTC TGCATGCCTTTCGGGGCCGGTATATCTGTGAAGCACTTGCAGCTGTAGGG TATGCGAGACAAATCAAATGCGCAACGATTTTTGTGGGACGACGAGGACT AGCGAATTAACCTATCTATTCTGGATAACAAAGTGCCGCAGACGGATATC ACCACAGCAGTGTGTGTTGCTGATGCTGCCGAAGATTCCGCTGCAGGTTT TTGGGTACTCTTCTGTGCCCCACTCCTGGGTCGGTGGTTATTACGAGGTA CTTATATTCCGAACCTTTCTTGATTGGTCGTTTCGGGTCGAGTGGATGCG GAAACACGGGAATGCAACCATACATGACTGCTGTACTGCTGTAGACTGGC TAGCAGAATAGATGGGATGGCAACACAACACAACAGTATTTATCACGCTT TCACGTAAAAAAACATGCCGTTGCTGCGCCACCACGTGACGCTATTCCGA CACAACAGCTGTCACGATGTGTGTATGTGTAAATCAAAACATCATCCGTA ATACGAAATCATGTATCTGCCTGATTCGTATGCACGGACTACTTAAAATG GTAGTTTTCCAGCCGAGCGAATCGGGCAACAGCAACTAGTTGACTGATGG ACACTCCCGCCCCCCCCTTTTCTCCCCGCCGCGCGCGCTCCCCCTCCCCC CTGACATTATTCGACAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGC AACTGCTTCGACGACATCAGCCAGCTGTCGTTAATGAGCAAATCGATGGC GGCAGCAACGTTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCG AGGAGCATATCTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGAC TGCTACCGCAAACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCAC TCACGTCGGTTGGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGG GCAAGGAGGGGGTTCCAACCCTGGCGTTCGAGGTTACTGTCGACCACGCG GGCCGCGCCATTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAA GACGAACGTCCGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAG TGTACAAGGATCGAGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTC ACCCGGAAAGGATGCTATTTGATCGTCGACAACGGCTATCACGAGGTGAG TGTATTGGGGGCCTGGGGAGTATTAGAATATCCGAACGTAGTGCGTGCTC CGTGACGCTTCGGGTTGATGTGAAGCCCGAAAATAACACGCCGGTACACC GAAAGCAGACCAATGCCATATTTGTCGGTACTGAATGAGAATCTTTATGG CATGTCGGCCCCGTGCATCGGGCGTCGACCTTACGCAGCGGCACACCAAG GTGAAAAACAATTTGCCGCTTCGCGTTCCTTCTATTTGTAGAGTTGTTTT CGTGCTGGTTCCGTTTGGACGGTTGCGTTCACTTTCTTACATTTCGAGCA TACATCACCCCATTTATAACACCAAAGGTTTTGACAAACAAATCTGCTCA GGGGTGGTCAGATGGCAAATATTGTACTTCGAAGTACAAAGTTGTAGGCA TCTGTGTTGCCCACATGTCCACACGGTTCCTCGTTCCCCCCGAGGAGTTT GATCGTGAAAATATGTGCGTCGGGGCCTGAGGTTTCCAGAGCCTTTCCGT AGCTCACCAGTCGTCCCTTTCGACCCCCCCCCTGCTACTGTTGTGCCGTC GTGTGCCAAATCAACAGTGGGTCACCCTCATGGCCCCATCGAAGTACCCG GGTGACGTGGATGACGCGGCCTTCTCCAAGATGCTTGAAACTGTGCGCAA GGATGTGGAGTGTTTCTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGA AGCTCCGCCTGGCCTACCACTGCAGGGAAGACATCGATAACATCTTCTTC ACGTGCTGCATTCTCCACAACATGCTCCACTCCTTCGACGGCATGAGCGT GTTCAAGGAGAACGTCGACTGGGCAGGCAGCGCTGGTCTGCACGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig769:126788..129383+

>mRNA_P-littoralis_Contig769.59.2 ID=mRNA_P-littoralis_Contig769.59.2|Name=mRNA_P-littoralis_Contig769.59.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1182bp|location=Sequence derived from alignment at P-littoralis_Contig769:126788..129383+ (Pylaiella littoralis U1_48)
GCCGCTCTCCACCACAGCGAGCAGCACGATCGACAAACACGCGTGCGCTC
GATGGCACAGTGGGCTGTTGTACTCGAGGAGTTGGGTGCTGCTACTTTGT
GGCGAGAGGAGGATGATGACGACGACGTGTCGCGTGCGAAGCGGACGAGA
TGCATCAAGGAGCGAAAGAACTGGAAGCAGTCTGCCTGGTGGACGCAACT
TCAGGAGGAAGAACTTGCCGTGCCCACGTCCGATGCGGCGAAGGTATTCC
GAGAGCGCTTTCGCGTGCCTCACGCCTTCTTCCTGAGGTTGGTGGAGCTG
TCGAGGGAGAAGAAGTGGTTCTCAGACGGAGGAGCGGATGCAGCAGGCCG
TGAGGGTATCCCAGTAGAGCTCAAGATCTTGACGGCCCTCCAGATACTCG
GCAGGGGCAACTGCTTCGACGACATCAGCCAGCTGTCGTTAATGAGCAAA
TCGATGGCGGCAGCAACGTTCCACAAGTTCTGCAAGAACTTCGCGAAGGA
GATGTTCGAGGAGCATATCTACCTTCCAACAGGAACGTACCAAGACGAAG
TGATGGACTGCTACCGCAAACTGGGTTTTACTGGAGCAATCGGTTCTACC
GACGTCACTCACGTCGGTTGGGGCATGTGTCCGTTCACCCTTGGCCGTTC
TTTCACGGGCAAGGAGGGGGTTCCAACCCTGGCGTTCGAGGTTACTGTCG
ACCACGCGGGCCGCGCCATTGGCGTCACCCAAGGGTTCACCGGTGCGACC
AACGACAAGACGAACGTCCGCTACGACGCAGCCGTACAGACCATCAGGAA
CAACAAAGTGTACAAGGATCGAGAGTACAAGCTCAGGAAGGCGGATGGCA
CGGAGTTCACCCGGAAAGGATGCTATTTGATCGTCGACAACGGCTATCAC
GAGTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACGTGGATGA
CGCGGCCTTCTCCAAGATGCTTGAAACTGTGCGCAAGGATGTGGAGTGTT
TCTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCC
TACCACTGCAGGGAAGACATCGATAACATCTTCTTCACGTGCTGCATTCT
CCACAACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAAGGAGAACG
TCGACTGGGCAGGCAGCGCTGGTCTGCACGAC
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