mRNA_P-littoralis_Contig768.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig768.2.1 vs. uniprot
Match: S4VRV0_9VIRU (Ankyrin repeat domain containing protein n=1 Tax=Pandoravirus dulcis TaxID=1349409 RepID=S4VRV0_9VIRU) HSP 1 Score: 65.5 bits (158), Expect = 8.620e-9 Identity = 48/151 (31.79%), Postives = 66/151 (43.71%), Query Frame = 1
Query: 148 AAAGGHIDVLNF-AYDNRYPWERWANAAAAGNGQVQALEWLDHRGCHSVREEVCVEAAKAGRLNVLKYLEGKGCPSGMGTSLAAAEQGHLVILTWVYNNEEDTAFRLGLGRPSGIGMGRLNKLCA-CAAKGGHLSVIVWARSKDFFWNEST 594
AA GH+ + + D + A+AAAA NG++ L WLD R C E V AA G + L Y K CP AAA GH+ + + E G G+ R N+ A AA+ GHL + WA + + W+ T
Sbjct: 80 AAGAGHVRCIEYLGVDTSCSARKLADAAAA-NGRLNVLCWLDDRRCAWKSERVVARAAARGHQDCLDYALAKRCPVTTKAVEAAAANGHVESMRRLLVPENSR----------GKGVDRSNRAVASAAARAGHLDCLTWAHTHGWAWSWQT 219
BLAST of mRNA_P-littoralis_Contig768.2.1 vs. uniprot
Match: A0A811BQ35_9VIRU (Ankyrin repeat domain containing protein n=1 Tax=Pandoravirus japonicus TaxID=2823154 RepID=A0A811BQ35_9VIRU) HSP 1 Score: 63.5 bits (153), Expect = 3.910e-8 Identity = 46/150 (30.67%), Postives = 67/150 (44.67%), Query Frame = 1
Query: 148 AAAGGHIDVLNF-AYDNRYPWERWANAAAAGNGQVQALEWLDHRGCHSVREEVCVEAAKAGRLNVLKYLEGKGCPSGMGTSLAAAEQGHLVILTWVYNNEEDTAFRLGLGRPSGIGMGRLNKLCACAAKGGHLSVIVWARSKDFFWNEST 594
AA GH+ + + D + A+AAAA NG++ L WLD R C E V V AA G + L Y K CP AAA GH+ ++ + E A + + + + AA+ GHL +VWA + + W+ T
Sbjct: 79 AAGAGHVRCIEYLGVDTSCSARKLADAAAA-NGRLNVLCWLDDRRCAWKSERVVVCAASHGHHDCLDYALAKRCPVTTEAVEAAAANGHVELMRRLTAPENSRAKCVDRSDRA---------VASAAARAGHLDCLVWAHTHGWAWSWQT 218
BLAST of mRNA_P-littoralis_Contig768.2.1 vs. uniprot
Match: A0A2U7UHB3_9VIRU (Ankyrin repeat domain containing protein n=1 Tax=Pandoravirus macleodensis TaxID=2107707 RepID=A0A2U7UHB3_9VIRU) HSP 1 Score: 62.8 bits (151), Expect = 7.120e-8 Identity = 42/138 (30.43%), Postives = 60/138 (43.48%), Query Frame = 1
Query: 148 AAAGGHIDVLNFAYDNRYPWERWANAAAAGNGQVQALEWLDHRGCHSVREEVCVEAAKAGRLNVLKYLEGKGCPSGMGTSLAAAEQGHLVILTWVY---NNEEDTAFRLGLGRPSGIGMGRLNKLCACAAKGGHLSVI 552
AAA GH+ L + R A+ AAA NG + L W+DH C +V AA G L+ L Y GC + AA GH ++ +Y +++ D GR + L+ + A AA GHL +
Sbjct: 78 AAAAGHVQCLEYLGVTAGKGARDASEAAAANGHLSVLRWMDHISCKWKSAQVVASAAAGGHLDCLDYALASGCAVSVEALERAARNGHAEVMRRIYAVGDHQRD-------GRNTS-----LSAVAAVAAATGHLDCL 203
BLAST of mRNA_P-littoralis_Contig768.2.1 vs. uniprot
Match: A0A0B5J0K6_9VIRU (Ankyrin repeat protein n=1 Tax=Pandoravirus inopinatum TaxID=1605721 RepID=A0A0B5J0K6_9VIRU) HSP 1 Score: 60.5 bits (145), Expect = 4.140e-7 Identity = 42/152 (27.63%), Postives = 62/152 (40.79%), Query Frame = 1
Query: 148 AAAGGHIDVLNFAYDNRYPWERWANAAAAGNGQVQALEWLDHRGCHSVREEVCVEAAKAGRLNVLKYLEGKGCPSGMGTSLAAAEQGHLVILTWVY---NNEEDTAFRLGLGRPSGIGMGRLNKLCACAAKGGHLSVIVWARSKDFFWNEST 594
AA GH + + R + AAA NG++ L WLD C V + AA G L Y KGCP+ AAA +GH + + N+ DT + + + AA+GGHL +++A + W+ T
Sbjct: 3 AAGAGHTHCIEYLGVGASVSARNLSEAAAANGRLNVLRWLDDIRCAWKSARVVLCAAAGGHHGCLDYALVKGCPASTQAVEAAAAKGHAESMRRLLAPDNDRSDTVDKSD------------SAVATAAARGGHLDCLIYAHESGWAWSRRT 142
BLAST of mRNA_P-littoralis_Contig768.2.1 vs. uniprot
Match: A0A225VP15_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VP15_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.790e-6 Identity = 41/103 (39.81%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 151 AAGGHIDVLNFAYDNRY--PWERWANAAAAGNGQVQALEWLDHRGCHSVREEVCV--EAAKAGRLNVLKYLEGKGCPSGMGTSLAAAEQGHLVILTWVYNNEE 447
AA ID L + Y + P R A AA NG++ LEWL H G + V EAA+ G+L+V+K+L + CPS AAAE G+L I+ +Y N E
Sbjct: 124 AADSDIDFLQWVYTQGFGRPTSR-ALEFAAFNGRLNILEWL-HVGPAKLELSCSVLKEAARGGKLDVVKWLLDRHCPSTSAAMEAAAENGYLQIMQLLYANSE 224
BLAST of mRNA_P-littoralis_Contig768.2.1 vs. uniprot
Match: A0A150GN18_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GN18_GONPE) HSP 1 Score: 57.4 bits (137), Expect = 4.560e-6 Identity = 39/128 (30.47%), Postives = 63/128 (49.22%), Query Frame = 1
Query: 67 AAKVGRLDLLKCAHDMDCGYDEKTITN-AAAGGHIDVLNFAYDN--RYPWERWANAAAAGNGQVQALEWLDHRGCHSVREEVCVEAAKAGRLNVLKYL--EGKGCPSGMGTSL-AAAEQGHLVILTWV 432
AA GRL+ LK + C D + + AA GG + VL +A + ++W + ++AL+WL RGC EVC+ AA+ G L L + E + P+ + + AAA G + ++ W+
Sbjct: 362 AAHGGRLEALKTLREHGCPLDARAVMRRAAVGGQLPVLVWAVEELGASVQDQWMGPTTSRFCDLEALQWLQQRGCRLDVAEVCLGAARRGDLPALAWAMEELRATPARVTCLMDAAAAAGSVELMAWL 489
BLAST of mRNA_P-littoralis_Contig768.2.1 vs. uniprot
Match: K8EGX4_9CHLO (F-box domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EGX4_9CHLO) HSP 1 Score: 55.5 bits (132), Expect = 1.470e-5 Identity = 50/180 (27.78%), Postives = 78/180 (43.33%), Query Frame = 1
Query: 67 AAKVGRLDLLK---CAHDMDCGYDEKTITNAAAGGHIDVLNFAYDNRYPWERWANAAAAGNGQVQALEWLDHRGCHSVREEVCVEAAKAGR---LNVLKYLEGKGCPSGMGTSL------AAAEQGHLVILTWVYNNE--EDTAFRLGLGRPSGIGMGRLNKLCACAAKGGHLSVIVWAR 564
AA+ G +D+++ D+ C +D +T A GH+++L + + P +A+ AAA NG+V LE+L+ R + A+A R LN + +L +GC AA +G L L W+ E E T F + C AA+ GHL + W R
Sbjct: 99 AARFGNIDVIRYLVVEKDL-CEWDWRTTQKACEFGHVELLKWLLEKGCPINDFASIAAAQNGRVNVLEFLEERDIVKIGRWSPRALARACRNLHLNAIDFLLQRGCQWDDDCLFEEVLVGAALTKGRLDALEWILEKEVCETTDF--------------WPQHCEYAARLGHLDCLRWLR 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig768.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig768.2.1 >prot_P-littoralis_Contig768.2.1 ID=prot_P-littoralis_Contig768.2.1|Name=mRNA_P-littoralis_Contig768.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=221bp TVSQLSDSFECGLSRSAAVPAAAAKVGRLDLLKCAHDMDCGYDEKTITNAback to top mRNA from alignment at P-littoralis_Contig768:16020..16682- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig768.2.1 ID=mRNA_P-littoralis_Contig768.2.1|Name=mRNA_P-littoralis_Contig768.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=663bp|location=Sequence derived from alignment at P-littoralis_Contig768:16020..16682- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig768:16020..16682- >mRNA_P-littoralis_Contig768.2.1 ID=mRNA_P-littoralis_Contig768.2.1|Name=mRNA_P-littoralis_Contig768.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=663bp|location=Sequence derived from alignment at P-littoralis_Contig768:16020..16682- (Pylaiella littoralis U1_48)back to top |