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Homology
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: D8LDJ7_ECTSI (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ7_ECTSI) HSP 1 Score: 592 bits (1525), Expect = 1.100e-204 Identity = 306/320 (95.62%), Postives = 313/320 (97.81%), Query Frame = 1
Query: 256 MSSFGGGSGSMLVLNDPAAQLSSVEGKAGAPAAPVTNLSAFASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGTLIVDDSSLIHDFYTGECERPVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQDEPFTSPEGLAEVDSRMASLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKLAT 1215
MSSFGGGSGSMLVLNDPAAQLSSVEGKA AAPVTNLSAFASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKN+EVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDG LIVDDSSLIHDFYTGECERPVHLVVDTALKNNIVGCKAFISTPLEI G+ALANVFHEVKV+LVSAEAERICIDRMVKGQ+E FT+PEGLAEVDSRMASLETSMQRL+TMLQ AEEYVGTVVDGKLPADPHMGRKLADTLAA+PRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKLAT
Sbjct: 1 MSSFGGGSGSMLVLNDPAAQLSSVEGKAATSAAPVTNLSAFASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGVLIVDDSSLIHDFYTGECERPVHLVVDTALKNNIVGCKAFISTPLEIDGSALANVFHEVKVSLVSAEAERICIDRMVKGQEEAFTTPEGLAEVDSRMASLETSMQRLVTMLQQAEEYVGTVVDGKLPADPHMGRKLADTLAAIPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKLAT 320
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: A0A835YQU3_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU3_9STRA) HSP 1 Score: 419 bits (1076), Expect = 3.070e-137 Identity = 219/317 (69.09%), Postives = 258/317 (81.39%), Query Frame = 1
Query: 262 SFGGGSGSMLVLNDPAAQLSSVEGKAGAPAAPVTNLSAFASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGTLIVDDSSLIHDFYTGECERPVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQDEPFTSPEGLAEVDSRMASLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKLA 1212
SF G G+ L+LNDPA QLS G A AP L+ +AS+NDIVVKVHP+VLFSVLDHYLRRPE Q RVIGTLLG V ANVVE+TNSFAVPH EKN+EVAVGKDFNK MLAL VNG+E +VGWYAT+FDG +VD+SSLIH+F+T ECE PVH+VVDT+L ++ +GC+A+IS+PLEIAG ALANVFH+V+V L S+EAERICIDRMVKGQ +P+G+A VDS SLE+SM RL+ ML+ A +V VV G++P D +GRK+ADTLA VPRMRPEAF ++FD NLQDLLMVSYLSSLTRTQLAIAEKLA
Sbjct: 2 SFSGADGA-LILNDPATQLSRT-GDAPAP-----TLTGYASTNDIVVKVHPVVLFSVLDHYLRRPEGQVRVIGTLLGKVNANVVEVTNSFAVPHQEKNDEVAVGKDFNKQMLALSGLVNGQERIVGWYATTFDGAQVVDNSSLIHEFFTTECESPVHIVVDTSLASDTIGCRAYISSPLEIAGEALANVFHQVQVQLESSEAERICIDRMVKGQAGGVLTPDGIASVDSEAVSLESSMTRLLAMLEAASAFVDKVVAGEVPGDAQVGRKIADTLAVVPRMRPEAFAKMFDGNLQDLLMVSYLSSLTRTQLAIAEKLA 311
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: A0A7S2WB79_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB79_9STRA) HSP 1 Score: 343 bits (879), Expect = 1.730e-107 Identity = 164/271 (60.52%), Postives = 212/271 (78.23%), Query Frame = 1
Query: 397 VVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGTLIVDDSSLIHDFYTGECERPVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQDEPFTSPEGLAEVDSRMASLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKL 1209
+VKVHP VLFS+LDH++RR E Q RVIGTLLG V + VE+TN FAVPH +K +EVAVG+ FNK+M L QRVN +E +VGWYATS +G +VD SSLIH FY EC PVHLVVDTA++ + +G KA++STPL +AG LAN+FH++KV L S+E ERICIDRM+KGQ PFTS E LAE+ + + SM+RL+ M++ A YV V+ G++ AD GR++ADTLA+VPR+RPE F+R+F+DN+QDLLMVSYL+SLT+TQL I+E+L
Sbjct: 67 LVKVHPAVLFSILDHFIRRQEGQVRVIGTLLGYVEESCVEVTNCFAVPHSDKQDEVAVGQAFNKTMYDLHQRVNPKEQIVGWYATSMEGVSVVDSSSLIHGFYAEECADPVHLVVDTAMRGDTLGVKAYVSTPLTVAGIELANMFHQIKVELFSSEPERICIDRMIKGQKSPFTSSESLAEITEELHGIGVSMERLLGMIEVASSYVDKVIAGEVQADEETGRRIADTLASVPRIRPEVFDRVFNDNIQDLLMVSYLASLTKTQLTISERL 337
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: A0A7S2DND3_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DND3_9STRA) HSP 1 Score: 341 bits (875), Expect = 2.000e-107 Identity = 167/277 (60.29%), Postives = 213/277 (76.90%), Query Frame = 1
Query: 379 ASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGTLIVDDSSLIHDFYTGECERPVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQDEPFTSPEGLAEVDSRMASLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKL 1209
A + +VK+HP VLFS++DH++RRPE Q RVIGTLLG T VE+ N FAVPH EK +EVAVG+ FNK+M +L RVN +E +VGWYATS DG IVD SSLIHDFY EC P+H+VVDTAL N VG KA++STPL+IAG AN+FH+V+V + S++AERIC+DRM+KGQ PF + E L+ + + SLETSMQRL+ M++ +V VV G+ AD GR +ADTLA+VPR+RP+ F+R+F+DNLQDLLMVSYLSSLT++QLAIAE+L
Sbjct: 25 AEGSSRLVKIHPSVLFSIIDHFIRRPEGQTRVIGTLLGYSTDTHVELVNCFAVPHSEKQDEVAVGQTFNKNMCSLHTRVNTKEKIVGWYATSMDGMCIVDSSSLIHDFYANECADPIHIVVDTALIANTVGVKAYVSTPLQIAGVEFANMFHQVQVEMSSSDAERICMDRMLKGQAAPFQTSEALSALPHELTSLETSMQRLLGMIELVSNHVDKVVSGEREADNETGRCIADTLASVPRIRPQVFDRIFNDNLQDLLMVSYLSSLTKSQLAIAERL 301
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: K0TIU7_THAOC (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIU7_THAOC) HSP 1 Score: 301 bits (771), Expect = 6.930e-92 Identity = 162/322 (50.31%), Postives = 219/322 (68.01%), Query Frame = 1
Query: 274 GSGSMLVLNDPAAQLSSVEGKAGAPAAPVTNLSAFASSNDIV---VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSF------DGTLIVDDSSLIHDFYTGECER-PVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQDEPFTSPEGLAEVDSRMASLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKL 1209
GS L+L PA L++V +A ASS + V VHP+VL SVLDH+ RR E RVIGTLLG + VEITNSFAVPH E+ +EVA+GKDFN+ ML+L R N RE+VVGWYAT+ + I D SSLIH+FY GEC+ P+HLVVDTALK + + +A+ STP+ I G LAN+FHE+++++ S+EAERIC+DRM+ D SP+G +L SM++L+ ML+ EYV VVDG +PAD +G +++ L+++PR+RPEAF+++F+D+LQDLLMV+YLS++T+TQL IAEKL
Sbjct: 10 GSSPALILTKPARSLAAVA-------------AASASSESVPACQVNVHPLVLLSVLDHHTRRQEGAGRVIGTLLGKRNGDTVEITNSFAVPHAERGDEVAIGKDFNRQMLSLHLRANPRETVVGWYATALPDEATGESHCIADTSSLIHEFYAGECDDDPIHLVVDTALKADAIALRAYKSTPVVIKGEPLANMFHEIRLSVRSSEAERICVDRMIGATD----SPDGADPTQDEGEALRVSMEKLLAMLETCSEYVDKVVDGSVPADDALGMDISECLSSIPRIRPEAFDKMFNDSLQDLLMVTYLSNITKTQLTIAEKL 314
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: B8LD20_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD20_THAPS) HSP 1 Score: 290 bits (741), Expect = 4.890e-88 Identity = 147/280 (52.50%), Postives = 200/280 (71.43%), Query Frame = 1
Query: 400 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSF---------DGTLIVDDSSLIHDFYTGECER-PVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQDEPFTSPEGLAEVDSRMASLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKL 1209
V VHP+VL SVLDH+ RR E RVIGTLLG + VEITN FAVPH E+ +EVA+GKDFN+ MLAL R N RE+V+GWYAT+ + I D SSLIH+FY ECE P+HLVVDT+L+ + + +A+ STP+ + G LAN+FHE+++ + S+E+ERIC+DRM++ +S EG A+L+ SM+RL+ ML+ EYV VVDG + AD +GR +++TL +VPR+RPE F+++F+D+LQDLLMV+YLS++T+TQL IAEKL
Sbjct: 1 VLVHPIVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRETVIGWYATALPDENDPVNGESKCIADTSSLIHEFYATECEDDPIHLVVDTSLETDAMALRAYKSTPVSVKGEPLANLFHEIRLAVKSSESERICVDRMIRSA----SSAEGAPASQDESAALQISMERLLAMLETCSEYVDKVVDGTISADDQVGRDISETLNSVPRIRPEVFDKMFNDSLQDLLMVTYLSNITKTQLTIAEKL 276
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: A0A7S3V657_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V657_9STRA) HSP 1 Score: 288 bits (737), Expect = 9.620e-87 Identity = 155/308 (50.32%), Postives = 207/308 (67.21%), Query Frame = 1
Query: 361 TNLSAFASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGT---------------LIVDDSSLIHDFYTGECE-----RPVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQDEPFTSPEGLAEVDSRMA-----SLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKL 1209
T L+ + N +VV HP+VL S+LDH+ RR ++ RVIGTLLG N VE+TN FAVPH E+ +EVA+GKDFN+ MLAL R N E+VVGWYAT+F + D SSLIH+FY GECE PVHLVVDT+L + +G K FIS+ + + G LAN+FHEV++ L S+E+ERI +D M++ EG + D + SL+ SM++L+ ML+ A +YVG VVDGKL AD +G ++ADTL+ VPR+RPE F+++F+D+LQDLLMVSYLS++TRTQL I+EKL
Sbjct: 18 TGLNNTQALNTVVV--HPLVLLSILDHHTRRQDSAGRVIGTLLGRRDGNKVEVTNCFAVPHAERGDEVAIGKDFNRQMLALHLRANRSETVVGWYATAFPSNGNDDNDDSNATTETRCLADTSSLIHEFYAGECEDTVMDSPVHLVVDTSLVEDTIGLKGFISSAVTLNGEPLANIFHEVRLLLKSSESERIVLDEMIRSLGGGAKKLEGEEKKDESVGEPSGGSLQVSMEKLLEMLETASDYVGQVVDGKLEADDAVGNQIADTLSTVPRIRPEVFDKMFNDSLQDLLMVSYLSNITRTQLTISEKL 323
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: A0A7S1ZLF8_9STRA (Eukaryotic translation initiation factor 3 subunit F n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLF8_9STRA) HSP 1 Score: 283 bits (725), Expect = 8.440e-85 Identity = 153/325 (47.08%), Postives = 211/325 (64.92%), Query Frame = 1
Query: 340 GAPAAPVTNLSAFASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSF------------DG--------------TLIVDDSSLIHDFYTGECER-PVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQD--------EPFTSPEGLAEVDSRMASLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKL 1209
GA ++P + +N + V HP+VL SVLDH+ RR E RVIGTLLG + VEITN FAVPH E+ +EVA+GKDFN+ MLAL R N RESVVGWYAT+ DG I D SSLIH+FY GEC+ P+HLV+DT+L ++ + +A+ STP+++ G LAN+FHE+++ + + E+IC+D+M+K D + PE A +S +A+L+ SM++L +ML+ A YV +VVDG +P + +GR++AD L+ +PR+RPE F+R+F+D LQDLLMV+YLS LTRTQL IAEKL
Sbjct: 18 GAASSPADVVDGAGVTNSVTV--HPLVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRESVVGWYATALPEEDEGNEEETKDGGKGKKKMTSSPKSYRCIADTSSLIHEFYAGECDDDPIHLVIDTSLIDDSLALRAYRSTPVQVKGEPLANMFHEIRLGMTCSGTEKICVDKMIKSDDLLKRRNKSQEEEVPEDAASDESPVAALQISMEKLYSMLETATSYVDSVVDGSVPPNDVVGRQIADALSTIPRIRPEVFDRMFNDELQDLLMVTYLSKLTRTQLEIAEKL 340
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: A0A8J9TEL0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TEL0_PHATR) HSP 1 Score: 279 bits (713), Expect = 5.610e-84 Identity = 149/278 (53.60%), Postives = 195/278 (70.14%), Query Frame = 1
Query: 400 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGT------LIVDDSSLIHDFYTGECER--PVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQDEPFTSPEGLAEVDSRMASLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKL 1209
V VHP+VL VLDH+ RR E RVIGTLLG NVVE+TN F+VPH E+ EVA+GKDFNK+ML L R N +E+VVGWYA++ +G LI D SSLIHDFY GE + PVHLVVDT LK + + +AF S+ + + G A+ N+FHE+K++L S E E IC+++M++ E S + E +S A L+ SM++L +L+ YV +VVDGK P D GR++ADTLA V R+RPE F+RLF D+LQDLLMVSYLS++TRTQ+ IA+KL
Sbjct: 1 VIVHPVVLLHVLDHHTRRQEESGRVIGTLLGRQNGNVVEVTNCFSVPHAERGEEVAIGKDFNKTMLGLHLRANRKETVVGWYASAANGDSESNGDLITDTSSLIHDFYAGEADEGDPVHLVVDTRLKEDSLSMRAFKSSQIVVQGEAMGNLFHELKLSLKSNEPEAICLNQMIRTGGELVASKD---ESNSAKA-LQISMEKLYALLEKTLAYVDSVVDGKTPPDAEAGRQIADTLATVARVRPEVFDRLFHDSLQDLLMVSYLSNITRTQMTIADKL 274
BLAST of mRNA_P-littoralis_Contig766.19.1 vs. uniprot
Match: A0A7R9W361_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W361_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.840e-83 Identity = 150/299 (50.17%), Postives = 199/299 (66.56%), Query Frame = 1
Query: 400 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSF----DG-----------------TLIVDDSSLIHDFYTGECER-PVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVNLVSAEAERICIDRMVKGQDEPFTS--------PEGLAEVDSRMASLETSMQRLMTMLQHAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEK 1206
V VHP+VL SVLDH+ RR E RVIGTLLG + VE+TN FAVPH E+ +EVA+GKDFN+ MLAL R N +E+VVGWYAT+ DG I D SSLIH+FY GEC+ PVHLVVDT+L+ + V +A+ STP+++ G LAN+FHE+ + + +E+ERI +D+MVK Q+ + A+L SM+RL++ML+ A YV VV+GK PAD +GRK+ D L+A+PR+RPE F+R+F+D+LQDLLMV+YLS++TRTQL IAEK
Sbjct: 29 VVVHPLVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDRVEVTNCFAVPHAERGDEVAIGKDFNRQMLALHLRANRKETVVGWYATALPVDSDGGEGEEGADSSGSGGGEYRCIADTSSLIHEFYAGECDDDPVHLVVDTSLRTDAVSLRAYRSTPVQVRGEPLANLFHEIGLAVRCSESERIAVDQMVKAQNREKADGGEXXXXXXXXXXXXEDEAAALRVSMERLLSMLETASAYVDGVVEGKTPADDKVGRKIEDALSAIPRIRPEVFDRMFNDSLQDLLMVTYLSNVTRTQLTIAEK 327
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LDJ7 |
| Preferred name | EIF3F |
| PFAMs | JAB,MitMem_reg |
| Model size | 2517 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K03249 |
| KEGG Pathway | ko03013,map03013 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000122,GO:0001732,GO:0002181,GO:0002183,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005852,GO:0006355,GO:0006357,GO:0006412,GO:0006413,GO:0006464,GO:0006508,GO:0006518,GO:0006807,GO:0007275,GO:0008135,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008593,GO:0009058,GO:0009059,GO:0009743,GO:0009744,GO:0009790,GO:0009791,GO:0009793,GO:0009846,GO:0009856,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010154,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0016020,GO:0016032,GO:0016043,GO:0016282,GO:0016579,GO:0016787,GO:0019080,GO:0019081,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023056,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031369,GO:0032501,GO:0032502,GO:0032991,GO:0034285,GO:0034622,GO:0034641,GO:0034645,GO:0036211,GO:0036459,GO:0042221,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044706,GO:0045747,GO:0045892,GO:0045934,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051704,GO:0060255,GO:0061458,GO:0065003,GO:0065007,GO:0070011,GO:0070646,GO:0070647,GO:0070993,GO:0071540,GO:0071541,GO:0071704,GO:0071826,GO:0071840,GO:0075522,GO:0080090,GO:0097159,GO:0101005,GO:0140096,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 |
| Exons | 7 |
| Evalue | 8.13e-213 |
| EggNOG OGs | COG1310@1|root,KOG2975@2759|Eukaryota |
| Ec32 ortholog description | translation initiation factor eIF3 f subunit |
| Ec32 ortholog | Ec-15_000300.1 |
| Description | translation initiation factor activity |
| Cds size | 969 |
| COG category | J |
| BRITE | ko00000,ko00001,ko03012,ko04147 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791580.7990854-UTR-P-littoralis_Contig766:58922..60221 | 1680791580.7990854-UTR-P-littoralis_Contig766:58922..60221 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig766 58923..60221 - |
| 1680791580.8781543-UTR-P-littoralis_Contig766:71566..71655 | 1680791580.8781543-UTR-P-littoralis_Contig766:71566..71655 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig766 71567..71655 - |
| 1680791580.8902214-UTR-P-littoralis_Contig766:73550..73710 | 1680791580.8902214-UTR-P-littoralis_Contig766:73550..73710 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig766 73551..73710 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791580.8121135-CDS-P-littoralis_Contig766:60221..60371 | 1680791580.8121135-CDS-P-littoralis_Contig766:60221..60371 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig766 60222..60371 - |
| 1680791580.8222313-CDS-P-littoralis_Contig766:64489..64594 | 1680791580.8222313-CDS-P-littoralis_Contig766:64489..64594 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig766 64490..64594 - |
| 1680791580.8354604-CDS-P-littoralis_Contig766:66274..66481 | 1680791580.8354604-CDS-P-littoralis_Contig766:66274..66481 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig766 66275..66481 - |
| 1680791580.850016-CDS-P-littoralis_Contig766:68388..68503 | 1680791580.850016-CDS-P-littoralis_Contig766:68388..68503 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig766 68389..68503 - |
| 1680791580.859288-CDS-P-littoralis_Contig766:70392..70628 | 1680791580.859288-CDS-P-littoralis_Contig766:70392..70628 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig766 70393..70628 - |
| 1680791580.868672-CDS-P-littoralis_Contig766:71410..71566 | 1680791580.868672-CDS-P-littoralis_Contig766:71410..71566 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig766 71411..71566 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig766.19.1 >prot_P-littoralis_Contig766.19.1 ID=prot_P-littoralis_Contig766.19.1|Name=mRNA_P-littoralis_Contig766.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=323bp
MSMSSFGGGSGSMLVLNDPAAQLSSVEGKAGAPAAPVTNLSAFASSNDIV
VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLE
KNNEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGTLIVDDSSLIHD
FYTGECERPVHLVVDTALKNNIVGCKAFISTPLEIAGAALANVFHEVKVN
LVSAEAERICIDRMVKGQDEPFTSPEGLAEVDSRMASLETSMQRLMTMLQ
HAEEYVGTVVDGKLPADPHMGRKLADTLAAVPRMRPEAFNRLFDDNLQDL
LMVSYLSSLTRTQLAIAEKLAT* back to topmRNA from alignment at P-littoralis_Contig766:58923..73710- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig766.19.1 ID=mRNA_P-littoralis_Contig766.19.1|Name=mRNA_P-littoralis_Contig766.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=14788bp|location=Sequence derived from alignment at P-littoralis_Contig766:58923..73710- (Pylaiella littoralis U1_48)
GGGTGCCTTCTTTGCTCAAAATTTGTGTCCGAAAGAACTATTCGGAAGGC
GATCTACGAGCTATTCATTGGCCACTGCGATAGGATTGATCCCCGTGTGC
CGTACGTAGTTTGACCTGATCCCAAAGAGCGCTCTCTTGCTGGTCAAGCA
TCCAGAAAACGTGAGTGTGCGTCGGGGCGTTTTGAATGGGTGGGTGCCGT
GCGTCTCTCTGCCTCTCCCCTCCCTTCTTGCCAGCAGGCACAGCTATCCT
TTCAACTGCTGAATGTTTACCATGTGTTGCTGAGACAGGAGAGAGAAGAG
AGTGCAGTGGGGGAATATGCCGTTGGTTGCACCTTGTAGGCGGAGCCTCG
TTGAGGTCGAGCTTGATCGTGGCTTGCTCTATATGATAGCGCAACACCTA
GGTATACTGGGTTTTAATGTAGTACATCAGCGTACAAATTCTCACTGCTG
TGAAATCTGCGCGCCTGTCCGTCTCGGTGTTGCTCAAAGCACGGTAACAG
CAGAGCCATCGTGTCTGCCAGCCGAGGCTGACCGTGGATCAACTCGAGCT
ACATCGACTCAGTTAGACGTATTTTGGATACTCGTATGGTAGTATGGAGT
ATGTTGACTATTCCGGGGTGCATCGGAATGCTGGCTCCAAAGCGCAGGTT
AGGTCGGTATGCAATCAATCGGCGCAAATACCGGTACACCGTCGACGGTT
CCACGATCATGTCATGTGACTCCGGAATCGATCACTGCTTCCGTCTTCAA
AGAAGTATGGTACCATGTCATATCATGCGAGTACAAGCAGTGTGCATCGA
GGACGTGCGGTTCATGGCAAGAAATTTGGCCTAGAATGTGCGTTGTGGAG
TAGGGAAACAGGTGCGTTATTTCAAAGAAGCCAGGGAAATTGTCATTGCT
CCATTCACTGCGCCGTTGTATCACACTCCGGAGTAAGTGCCCTTCCCTTC
CCTTCGATTACTTTGGTCGTGTTCTTTGCCTCGAACTCCCAGTGCTCGAA
GTACAGCAGAGCATACAGCAACCACAGTACTCGTACAGTAGAAGTACTTG
AAAAGAAAAACACCACGTGAAGGTACTACATGCAGGTACAGAGCAACCTA
TTTTCACTCTTAAAATAAGTACCTGGTACAAAACAAGGTCTTGTTGTTGT
ACAGCGGTGCTCGTTGTACTCCAGATAAATTAATTTCAAACCGAGAGAGG
CCGAAACGGACAGAGCCCCCAAACTACCCACCCACCCACCCACCACCACC
CTCCATCAACAACACGTGCACATCTATCGCATGTATCACATTCACAGAGT
AAACTGGTCCAGGAGACCACCGAAAGTAGACCATGTATGTACGTACATGT
ATAATGCGTAATCGTGTGCGACCTTCCTTCTGTGTGACCCCGGTGGTGCA
CCCACTTCACACCGAAAGGTGTAGACCGGCGCCCAGAATAAATGGGATAA
AAAGCACACACACACACAGACACACACATAGACAGACTGCCGTTGAAGCA
CCGCTTGAAGTGCTGCTGCGCGCTGAAGTGCGCCTGTGCTATCATATCAT
ACTGCTGTTGTACCCGAGGCGGGTGGGCACAGCAGTAGTGAGGAGAGATG
GGCCCCTCATCCCACGTGCCGCCTCGTCTTCGGCAACGAGTGCCCGCCCA
AAAAACGGCAATTCGTATCCTATCACATACTTTTGAAGCACTGCTGCTGT
ACAGATGGACACAACGTCGAACAACGATTAGCGGCGGTAAGTGCCTCCCT
ACCCATCACCTCGCGTTTTCACCATGTTTTATCCCACGAACGCGTTTTTT
TCATGTGGGGGGTTGGTAGCGAGAAGGAAGGATTTTTATTTTTTTGAGGA
AATTGTGAACATTCATCTGCCTACATCGTCGTACCGTTCTGCAACCGCCC
ATGAGATTAGTTTTTGCATGCAGTAGTGCAGCATCGCATGCATCTGTTGA
CACGTTCCTGACTGAGCGCCACAGCTTCCAAGAGAAAACCGGCCGACTCA
CGGATGTCTCATTCCTCGCATTCTGCTGTCTGGTGGTCCTTTTTCTTGTG
TTCAGGTTTTCCTAGAGACCCCGTGAGGCGTCTTTTGCTGCTTGTGGCTC
TGCTCGCCGGCGGCCTGTGGTCCATAGCCTAGATTGCCTCTATCATGTCT
ATGTCGTCCTTCGGAGGGGGGTCGGGCTCCATGCTGGTGCTAAACGATCC
GGCGGCGCAGCTTTCGAGCGTGGAGGGGAAAGCCGGCGCACCTGCCGCAC
CGGTCACGAACCTCTCGGCCTTCGCCAGCAGCAACGACATCGTTGTCAAG
GTGTGTTTGTGGGTGTTTTTATGTGTAATTGGGTGCGTTCGTGTGTGTCT
TATGTGTAACTGCGTGCGTTCGTGTGTGTTTGTATGTGCCGCTCGGTGCG
TGTGTTGTGCTGGGCTGTGCGCCTTCGTGGTCATGCGTTGCTGCTACTAC
GGGTGTTTTTTTGTTCACGTGATGGTGGTGTGTTGTTGTGTTCCCCTACA
TGAGCGTGTGTATCCCTGCAGTATTCCTTGTGTGTGCCCTAGTGTCTTTA
TCTGCCTGGGATTGTGCGAAATATCCAGCCTGTGGCGGCAACATCCAAAT
AGGGGCCGAGACACGCGTCAGTGTCCGGAGGTCTCCTTTCTCTCCCTTGC
GAGGAACACCGTTGGTCACTTTCCCGTCCGTTCCGTCCCGTTCCCCTGAT
GGTGCTTCTCTCTCGAGTACAGCAGTAGTGTGGTTGGTCACGTTATCCCG
ACAGTGCTCTTCCACCTCTCGGTTTTTGATTGGTCGCCCCCGCCTGGCTA
TACTGTCGGTTGTCTGCCGGAGCTGTCTCGCTGGCTGGTTACCCTTCTTT
CTTCCCCCGATGGTGTTGTATCCACATAAAATATCGGAACATAAACGTTC
CCCTTCACTTCTCGCTCCAGGTCGGAATTATTTGTTATTATTCTTTTTTA
CCTCTTGCATTTGGTTGGTGGTTCCCCGATGTTGTTGCTTTTGCATGAAA
TATTGGAACATTTATGTTCCCCGTTCTCGCTTCCGCTCGTAATTTTCCAT
GTGTATTCCCCCGCTCTTTGTTTTCCTGCCAGGTTCACCCGATGGTTCTG
TTTTCCGTGTTGGATCACTACCTCCGACGACCGGAGAACCAAAAGCGCGT
CATCGGCACCCTGCTCGGCACGGTTACCGCGAACGTCGTCGAGATCACGA
ACTCGTTCGCGGTGCCGCACCTGGAGAAGAACAACGAGGTAGCCGTGGGG
AAGGACTTCAACAAGTCCATGCTGGCGTTGCAGCAGAGGGTCAACGGCAG
AGAATCCGTGGTGGGCTGGTGAGTTGAAGGAAGCGCACGCGCGCCATCGA
CTGAGACGGTCTCTGGGCGGCCTTGTGTCGCTGTTGTTTTTCCGCTGGTG
GAGTGGAGTGGTGTGGGTGAGACGCTCATGACATGCATGATGTCGCGGGG
CCGCCATGCTGTCACTCAACACCCGCGGCTTCTCGGGTTTTTCCCGTTTT
CAAAGAAGACATGACACGCTGCCTCATGTCTGTGTTCGCCGTGGGTGTAG
CCGGAACGGTGCTGAATCCCTTGCGTGCTAGGTTCGGGGTTACTTTGTTC
CTGTCCCCATCCGGAGGGGACACTGGCCCAATAAAAAATGAAAAAAAAAA
CATGCAGCAGGTATGAAACAACTATTTTTATTTTAATAACCTCTTCGAGT
CACATAGATATATCTAGTTTCGGTTGACACGTTAATTTCTTCGGGTCTGC
AGCATGGATACGGTCAACTGAGTGACTCAAAACACAGCACGTGTGTCACT
GGAACCGCGGTTGATGGTATTCAAATCGCTGGAACCTCCGCTTTTTGCGC
CGCTTCTGCTGCTGTTTTCGATCCTTTTTTTTTTTTGCTGTCGTGCATCA
TTCGCTTGATGAAGGGAGCCACCATGCCGGTACCGTCGAGTTGCTGCACG
ATTTATTATTGTTTTCAAGCCCTCCCTTAGCTGCGCTGCGCTTTGTGTCC
CTTGCATCGACGGCGTCGTTCAAGGTCAGGCCGTGATAAGGGGGCGTTTC
TTTCTTTGTTGGCGTTTTCTTTTCTTCGAAGTGAAAGTCAAAGTGGATAG
GTTTGCTGCACAATTCGAAGCCGGATGGGTCTAACGAAAGTGGCTTGTCC
CGGTCAAATATTCGCTGCAAGAACAACTGCCCCAAAAGGGGGTGACGAGA
GGTTTTGGGTGGGAGGGGTTTGCGAGAGACCTGCGCGGCGTCCTCTCTGG
AGCTGCTGCACGAGTCCTTTTCTCTGGTCGAACTTTCTCTCAATAACCTC
GCGTACATCTTTTTTTTAATCACGTGGAAGCTTCAAATAGGCGCTTCGCG
TACACACTTCGTACGAAGTTTGCTTTGTTCTTTGTACCATTCGTGCATTT
GTGTGTTTGCTTTGTCGTGCGTATTAATCGCGTTTTTGCTCTCGCGGGTT
CTGTTCCCGGTATGCTACAAACAAAATTGGTTTACCGGTATGGTACGTTT
CTTGGTGCCTGTTGCGCCTAAATGGACGATCCTCGGTTGCTGTTGTGGCT
GCTGTGCTTCCGTTTGGGCGTTCGCGTTGAGTCTGCGTAAGCTCGTAAAG
TTCGTCGTTGCGTGGCGGTTTCATGCCCACGATATTGGCTTGCGGCCCGA
GTCTACAGCTCCTTCTCTCTCTCTCTTTCCCATTTCTCTGTCCCGATCCC
ATATTATTCCGCACGAGGCAGGAAGTCCAACCGTCGCTCCGCCTCCATGT
TTTGGTTTGGTTTGTGTCCGCATGGCCGAATCATTTGCATTATTTCGACG
ACGTTGCCCACTACTTCCAGAATGGTTTTTTGTTTCCCAGGTCACCACAA
CACCAAAAAAAAATTCAGGCTCATGAGACAGCCAAAATGCCTGTGAGTGC
TCCTGTGCTGATGATCGCTCACTTCTTTCTCGAGCTCGTGACTACACCCT
AGTGGCTTGCCTTGCTGGTGAATCCCGCATACCAAGTACATTTTTTGCGT
GGATGTTGGTATGTTTGTTGTCTCCACGTGGAACACCATTCCGATCTCTC
CTCAGGACCTCAGTATGTCCGCACTCGTCCGACCGTGGACGGTTTCCGTG
GTTTGCACGTACGCATGCCCTAAATCAGAAGTTGTCTCAACCGCCTTGAT
TTTCCTCTTGATTTTTTTTCGTTTTCCGGACGGCGACGTGACGATGGCGA
TGAAAAGGTACGCAACATCCTTCGACGGGACTCTTATCGTGGACGACTCC
TCTCTGATTCACGACTTTTACACCGGGGAGTGCGAGCGACCGGTTCACCT
CGTGGTGGATACCGCATTGAAGGTGAACCAACACGCCTTCCCCACTAGTG
CAAACCTGTTTCTCGTGGACTTTCATCTCGTGTATCATGTCACATCGTAC
GAGTGGAACGTCTCGTGGAGGGTCCTTCGTGGTGGATACCGCATTGAAGG
TGGATCAACACGCCTCCCCTACTACTGTAGTGCAAACTTGTTTCGCACCG
GCTGTTATATCATATCATGATCATGTCATACGTGCGGGACGTCTGCCTGT
GAGCCGTACTCAGTCATTTGTTGTAGATCCCTCGTTGTTGACTACTGCTG
TCGTTCTGTTGTGAGGATCAGTGAAGTTTGGAGGGACCCTCTGATCTTGC
GCTTGTGTCGTTCGACACATGAAAAAAGGCCAAGCATCCCCCGGTTAAAA
ACAATCAGAACCTGTTGCCACTGGTGCTTACCCTGGTGTATCATACTGCT
CGTCATTTCGTCCTACACCGATGGTATTTGCTGTTCGTGCGTGCTTGCTG
ACCGCCCTGCCGTGTATCATGTCTGAAGTGATTTCGACCAAAAATCGGCC
ACGGGACAAGGTTGACCGCAGTAGTCGGCGGTGTACACTCGTTACATGCC
TCTGAAGGGTGTGCCATTTTGACCGAGGAATGGTTTTGCTGTACGTAACT
CTTGATTTTGAGAGGCACAAGGACGCATGCCCTCCCCATGTCTGGTTTAT
TTAGGCGAGAGTTGTCGACATGGGACGATAAGGGATTGATTCTCACGAAC
GGTCTTCACCAAATTGACGGGGGTATTTCTCGACAGACCTCGAGCGGTTC
TCAAGGTGTTTGTCTGGCGCCCGTCCCTTAGTAGGTTTCACTGAAAGAGT
TTGCGGAAATCAATCACGTATAGGGGAAAGGCGTTATTCATGGGAAGAGG
CGTTTGTTCGCTCCGCTTTTTGACGGTTTTCGAAGTGCGCGCGGCAGCAA
TAATTCTGTTTTGTGTAGTTGGTGGCCTGTGAGTGTGTATTGTGTGTTGT
TGATTCTGACGTTAGCTCACCACCCCAAGTCTAGCCCGTGGTCACAAACC
CGGCACACGCCGTGCTATGTGGGGAAATGTATGTGTTTGTGTGTCGTATT
TCATTTTGTTGCGCGCGCCGGTCTACAGGGTGCCTTTTTTTTGTTGACTG
GGGTCGTTGAGCCTTGTTTTGGCTGTGTTTCCGCGTACTGCTGGATGATA
CGGGTATGATGGGATGTTAGGGAGTCGCGCTGTGCCGGTGATGTTGAAAC
TTTAAAGACTTTGATGCTGACCTGACACTGAGGAAGCAAGACAAGACTAC
GATGGACTGACGGCACATTGCAGTATCGCTATACTCGTACTGTATTTGGA
CTTACCACACTCTGTAGCTGCCGCTCTCGCCGGCGTTCATCGCTTCTTTT
TTATGTTTTGTTTATTTTTGAAAGGCATGCATTGTGTACTATGTTCGTGT
CTACCCAAACGGGGCAGCTCAATGCAGTTGAGCAAACGCAAGGTGTAGTA
CTTCGCGTCACACCTCCTCCTCTCGATATTGTCCAAGGCATCGGCTGCTA
TCGTCCGCTGCAAAGCGGTTACTGGCATACCTCTCTCGAAGGTTTTTTTC
CATTTATGCCACTCACTACTGTGCGACCCCGGTTGGAGCGTCTACCTACC
CGAAAGGTGTAGAGTGGCGTCCAAGTAAAGGGATGACAACACACACACTA
CTGTTGTTAGTTCTCTCTGTGTTCTTCAATGAATGTTGTCCCCAGAACAC
AAATGGCTGCGGGGTGTCATGAGTTCAAACTTTTTTTTGTCTCCTTCATC
GGCGTGTACTGTACTCATGTTGTTTCTCGCTCCCGTGGTGTTCGTTGCTG
CTGCTGTTCGCTGTATGTTTGTTTTCGTGTTGCCCCTCTCCTCCGGTGTT
GTCGACTTGGTGGCGTGTTGTTGTTTCAGAACAACATTGTCGGCTGCAAG
GCGTTCATCAGCACACCTCTAGAGATCGCCGGCGCCGCTCTGGCCAACGT
GTTTCACGAGGTGAAGGTAAATCTGGTGTCGGCAGAGGCAGAGCGGATCT
GCATCGACCGAATGGTGAAGGGGCAGGATGAGCCGTTCACGTCACCGGAG
GGGCTTGCGGAGGTGGACAGCAGGATGGCGAGCTTGGTGAGTTTCTTCTT
TCTCTCCCTCGGTCAGTCGATCAAAACACCGCATGTTTTGTCTTGAAAGA
ACAAAAGAGCTTGTGTATTGGACTGTATTGGACTGAATTTACTCGTGTGC
GACCAGTGACTTTTGAACGGACACCGTCTGGTGCGCCCGACTCACTCCGA
AAGTATTAGGCTGGCGCCCAGAACTCCTCTGTGTCTTGAACCAACCCCGT
CTGGTGCGGCCAACTCATACCGAAAGTTTTAGAATGGCGCCCTGAACTCC
TGCGTGACTTGAACCAAAACCGGCTGGTTCGCTCAACTCATTCCGACAGT
TGTATTACAGTCTGGCGCCCAGAACTCCTGTGACTTGAAACAAGCCCGAC
CGGTGCGCCCGACTCATTTCGAAATAATTGTGTAGACTGGCGCCCACAAC
TCTTCTGTCTTGAACCAACCCCGTCTGGTGCGGCCAACTTATGCCGAAAG
GTGTAGACTGGCGTCCAGAACTCCTGCGTGACTTGAACCAACACCGGCCG
GTGCGGCCAACCCATACCGAAAGTTATTGATTGGCGCCCTGAACTCCGTG
CGTGACTCGAACCAACACCGGCTGGTGCGGCCAACCCATACCGAAAGTTG
TGTACTGACGCTTATATCGACAGGGTGACGAACACGTCATACACACAACG
GTACTATCTCTGGTTTTTGTCAAGGTGGCCATAGTCAATTTTCTTTCTTT
AATTTGTGTTCTTCCCAGCACGATATTTTCCTTGTTTGTGACCACGGCCT
AGACTTTGGTGGTGGCCCAAGTGTGATAATCAACAACTACACACACAGAC
ACACACGCACCCAAGAGGTGTCATGGGTCAATACGAACTGTTTGCCCCTG
GCTGACAGAGAACCAATGCCCCTGACTGACAGAGGGAGACACGGGGGTAT
CTAGGTCTTGGTGAGCTGTTGCAGGATATCACATTTTGTAGCGTCGATGA
GTATCGTGGTCCTCCTCCGAGAAAACAGTCCGGGGGTGATACATGTACTA
GGTGACACCCACCTGACACTGGACTCTCGAGAGATAATACAGATACATAC
AATACACGTATCTGTATCTATGCACAAACCCAGGAGTGGAAAGCGATTCT
CTCGTGAGTACCCCAATTTCTTCTCGAAAATAAAACGTCGACGATGGGCA
AGGGTGGCCGTACCGAACCCTGCCTTCTTGTCATTAGAAAATTAAGTGGG
GGGAAGAAAGATAAAAGGCAGTTCCTGCCCTGACCTTCCTGCTGTGTAAC
CCCGGCTGATTCACCCGCACGTTTGATACCACACCGGAAGGTGGAGACTG
GCGCCCAGAATAGATGGGATGACAGCATATAAATTACGTCCCTATCGTGG
ACCCGTGGTCACAGCAGTATGCAAGGAGCATGCCACCCATACCTGTAAAA
ACTCGCGGTAAATCGAAATTTTTCAGAGCAGGAAAGCTGGAAACAAAAAA
GAAGAGGGGCACAGGAACTGCTCAAATCCCTAAAGGAGATACGTCTTGAA
TTCCTCGCAGGTTATGAGGTTGTTTCTACAAGGTCCTGAATCGTTGATAA
AAACTGTCGAGAACGATACTATTATAACTATGTACCATTATGTTTCCCTT
TACCCTTTACCCGTGCTGCTGTTCCGTGCGTGGTATTATCCTCGTCTCCC
GTGTATTGTATCTTAGGAAACGTCGATGCAGCGGTTGATGACGATGTTGC
AACACGCAGAAGAGTATGTCGGGACTGTCGTGGATGGGAAGCTGCCTGCC
GACCCTCACATGGGCCGTAAGGTGGGAAAAAAGTGCTTCTCTGTTGACTG
CTGTCGTTTTCTTGTCTTGTTGTCCACCTGATTAGTTTATCTGAGTTACC
TTTCATCACCTGAGATTTCATTTGTGTACAGTGCCATTTATTTTTCTTGC
GGAGGTCTTCTTTTTGTTTGTGTTCACTTGGTTGACTGTGTGATTTTCCG
TCAATCGACTAACTTTTTTTTTAATTTTTGGATACTTTTTTCTCGCGAGA
GTCCCGTTTTTTTTTATTTTCATATTGCACTTGATTTCATTTCTTTCTGT
TCGTTAACTGGCATTTTGAAACGTCTTTCTTGCGGGGGCCCCGGTGCGGG
CTGAGCATGGACAATTTAGGGAGAGTGATTTCGAGGCTTCCGCTCGCACG
TCTGCCCCCCATGCAGCCTTGCAAGTGATTTTTTTCGGGTTCGTGCATGA
TCAAGTTGACGCTTCTATAGGCATACTGACGGAACCGTTTTTTTTGTGAC
GACAGCCTTCCAAAAGCCTGGTTATTCTTCGAAGCATACGCATCAGTATG
CTTGTGATGCCTGCTACATCAACGGCAAACAGTAGCTAAATTGTTCTTTT
TTCTAACGTGTACCCCTTGTGCGCTACATCCGTGGCAAACAGAAGCTTGA
TTGTGCGTTTTTTCTAGCGTGCGCCCCGTGCGCGTGGTCCGGTAAGCAAC
ACACAAGGTTTTTTACGCCTGATCCCTGTGATGACAAAATTATGAGTGAG
GACAATCCGCGGCAGGCACTGCTTGGTAGCGAAAAGCTCAACACCTTTAC
ACCTTGAGGATTACCCGACATTTGACATTTGTTTTACTGCCCAAAGCTTT
CTTAGAAACGACTAGCGCTTTTGAGAGCGGAACCAGGGTACGTTAGGTAC
CACCCGCCCCTCCCCCACGAGGTGCTTCTAAACCTCGATGAGCCATTTTT
TACGCACTGTCGAACATCCTGAGTGTGCAGAATTCGGTACTCGCAGCAGT
GTACCTCCGTTTCATTAGTCAAGTGTCCTCGAAATCACAAGCGTTGCTCG
CTGGTATGGTGTACATCATTTCTCGTCTTCAGTCGTTCGTATTTTCCAAT
TTTCCCGTGTTTGGTCGGATGCGGTAGCTTGACATCGGACATTCACGAGC
CTAGTCTCTGTGGTTAGGAGAAGTATGACGGAGGACCACAGCCGTGGTAC
CGCGCAACGAATCAATGCGTAAGTCCAGCAATCCTTTAAGTTGTTTTCGC
CTGCTTTGTATGATTTTTGTAGAAGTTCGTCATGTCCAGGAATACGTATT
ATACAAAGTATGTATTTGTAGAAATTAATCATTTCCAGGAATATGCGTTG
TGTGTATTTTCATCTTTTTGGCGAAACGTTTCAAAAACGCCCCGTGATCT
ATATCATGGCGCAAGAGCGAGCACCTGCTGTGTGTCGATTGCGAACTTCC
CACTAGTCCAAAATGGATCTCGCGCTGCTGTAACTGGAAGTTCGTCGTTG
TTTCTTGAGACTTTGGTTTGAAGTTTGGTCCGGTGAGCTTAACATAAAGG
TAATTTACGCCTGATCGCTGTGACGAAAAGACTTGAGTGAGGACCACAAC
CACGGAAAATCATGCTGGGAAACCACAACCAAAACTTGGAAGAATGCTCC
AAAACTTCAAGAAGCATGTGCGCATGTGATGTACTCTTCAAGCATCGCAC
TTGGAGGAATCATTTGCCAATATTGTACGGAGTATCACGTAAGCAGGATT
TGTACGAGAAAAGGCTTCGAAACTGGTCCGGAACAGGTCTTTGCTGCTGT
CAGGTCGTCGTATTGTTTTTCTTCGTACTTGAGTTTGGTCCGGTGAGCTT
CACATAAGGTAATTTACGCCTGATCTCTGTGATGACAAAACTATGAGTGA
GGACCACGACCGTTGTATATAGGTATTGGGTTTCGATGACGAGAAAATAA
AAAACGAACGTACAGCAGTCAAGTGGGAAGAAGATTGGACTCAAAGTAGA
GTATTCGAGGCTGATTCATATCATGATTTTGGTCGTTACCCCCCCAGTAC
CCAAGACTATGTTAAGTAGATGAAACTTGAGTTTACCAACAGATGGTACC
TGGTTGGCACGGATGGCGAGCTTCCAAAATATTCGTGAACATGAAATCAT
TCAAGTCAATTCGTATTTTAATGTTTTTTTGTTCATTCGATGAGTTTGGT
CCGGTGAGCTTCACATGAGGTAATTTACGCCTGATCTCTGTGATGACAAA
ACTATGAGTGAGGACCACAACCGCTGTAGGCAGTGTGTTCGGATGACGAA
AACTTCAAAACTACTCCATGTGCGTTGATGTTTGATGTATATACGTACTC
AAAAGTACGAAGTACTTGTACGTCGAAGTAAAATAGTCGAGGCCTGATTC
GTGTATGGTTTGCTCATGCCCCCGTACCCAAAACTGGTTGATGCTGATGG
CGAGGTTCCAAATTAATCGGCAACGTGGAACCTCAACCCATTCGCTTTTG
AGCGTTTTTTTGTTCCATTTTACTCGATGTGGTCCTGTGAGGTCCACATA
AGGTAATTTACGCCTGATCTTCGTGATGACAACAACTATGAGTGAGGACC
ATTAACCACCGCGGTACCGGGTAACGATGACGAGATTTTGATAAGCAACT
CGAAAACATATTTCCGTCTATTTTCTGGTGTCGAGACCATTTGATGCCTG
ATTTGAGTGTGATTCTGTTAATACCTCCCCAGCACCCAAGATGTTGCTGA
CTGGATGAAACTTGGGTGCACCAAGAGAAATCACCTGATTGGTGGTGATG
CCGAGTTTCCAAATTGTCGATGGTGAATACATGGGGACTCCGCAGTTTAT
TATTCGTTGCGAACGTTTGCGTTGAGTCGTTTTTTTATTGTTTCCTTCGG
TTTGGTCCGGTGAGCTTCACATAAAGGTAATTTACGCCTGATCTCTGTGA
TGACAAAAAGTATGAGCGAGGACTTTTTCCCGAACAGACTCGATACATTG
TGTAACCTGACCTAGTATGGGACAGTACTCGGTATGAATGGCGTTGTGCG
GTTTGACACGACATGATTCCTGGTACAACGACTCGTCTTGCTAAACACCC
AAAATCACTTACATTACTGTTATTAAAAGCAGTTATCGTATCACGAATTT
GTTGCCTTGAACGTCGATGCGATCGATTTTGGGCGTACCTCGGCGTCAGT
AAACTCGATACTCCCGGTTTGTTAGTACTGGGTGCTGTCGTACGCCCAGC
AGTATTTGAGAATGTTCGGCTCAAATGTTTCCGCGCTTGTCTCCCAAAAA
CAGGGAAAACGCCTTGTACATATGATACATGCATGGGTGTTTTTGTCCTT
TCGCAACGAGATGGAACCCTTTCATGTCCGCATCGCAGAAGAGGGTTGGA
AAAAGTTAAGGTTGCGTGCGTGCGTTGTCGACGACTCGTCCTGTGAGCTC
AAAATTTAATTAAACTCTGAGCCTCGGCGCTGCAGAAAAAATGTCGAAAA
TCAGTGAGGACGATGTCTGACAGCGGCGCTCGCACTCGCACTCAAGTGCT
ATCATGGAGGTAATGAGGAAATACTTGTTATAGCACCAGCGAATGTCCCA
TCTAAGACGGATATCGAGGACATGTGTCTCTAAAATGCTCGCAGAGGCAG
GCTTTGTTGCAAACACTGCTGTCACCACGGAGTTCGATTGGTGAGGCGTT
TTGCCGCTTCATTGTGGCGTTTGGGCTGTACGCGGACACGTGGCGTTTTT
ACTGCGTTATGATACGCGAATGTTTCCTTTATTTTGTCTTTTTGTCTTCG
CTTTAGTTTTTTTTACGAATTGAAGGGAAATAATCCCTCCAGCCTTAGTC
ACTCCTTTTCAGTACCACGTGATGAGTTGGAATGCGGCTTTCTTTTCCAC
GTTGCTGTGGAGGGACTCCGTGCCTCCTCTCGAATGATGCGCTGGGTGGC
TTACCCGCCGGGCTGAGGCAAGCATGGGACGGACCCCCCTTGCCCTCGTC
ACTCTTTACTCTCACGGATCCCCCGGTCCAATACCTCCCCCCCCCCCTTC
GTCTATGCCACTCCTTATGGATGCCCCCCTTTCTTCGTTCTATCGGGTGT
TGTGTGTTCCGTGTGTATTCTTTTGATCCCCCTCCGCAGCTGGCTGACAC
TCTGGCGGCGGTACCGCGGATGAGACCCGAGGCGTTCAACCGGCTGTTCG
ACGACAACCTGCAGGACCTTCTGATGGTTTCGTACCTCAGCAGCCTTACA
AGAACACAGCTCGCGATAGCGGAGAAGTTGGCAACTTGATCTTGAGGTTG
AGGGGAGGGGGGTGGGTAGGGTGACGAGATGGTGTCGGAAAAGTTTCACA
ATTACTAGAGCTCGTGACAGCGGACACTTTTGGTAGTTTTTTTTGTTTGC
ATTTGTGGGGGTATGACAGGCTTCGCCGAAACCGGAAACTGGGATAGCGG
AGGGCGGTGGCTTTACGGATGGGCGGAGGCGTTTGGGTGCATGTGTGGTG
TGCAGCCCCACCGAGACACAACGGCCTGCGATATCGCGAATCTTCGACTA
CTGCTGTGCGTCGATATCACTGGTCAGATGGAGACGGGGAAGGGACACTG
TAACGCAGAGACACAACAACACCACATGTTGTCGTTGAGTCCTTCTCGTT
GTCGCACCATTGTCGGCGATTGGTGTTTTTACCTGAAGTGGCGATGATCG
GTTGCTGCAGATGGTGCGGTATTTCTGTTGGGATAATGACTTGGCTTTCG
GTTTGAAGACAGGGCCCCCTCGGCAATATAAACAAACTCGGATTCGGAAA
AAGTGAGGCTCCTTAGAATTTCCAAGGGATATTTGAATGTTTTGGAATCC
CAGTGCGGGAGGGGGTATTTGTAATCCGCGTACGATACGAGTAGGTCATC
TGTTTTTTCCTGTGGAGGCGAATATGTGACGTTAGGGTGATCGATTGTGC
ATCGAGCACGGCAGCCATGTGGCAGGAATTGTTGCCGACATACAAGGGAA
GATGGCCACTTCCTTCCCCTGGTTTGGCAGGCGCGAACACCCATCGTGAC
GTTTTCACGGGCAACCCGAACTGATCCGTCGAACACTATTTACTTCGCAG
GGAAGGAACACCGGTTGTCCGTGCGAGGGAAATCGGGGCTGTTTTTTTTT
TCCTGTTTCGAAACCGCGAGACATACGACCATGTGCTGCGTGCCCTGTCG
AGGTGTGCAGTGTTTTTTCTCGAGAAGATGTGACACACGAACCGGTTGGT
TGGTGTATTATAATCCACCCGTAAGTGTATTGGGTGTCCTTTCGTTTGCG
CCGCTTAGTTGCCGTGCCGAATGTAGAGAGAGAGAAGTGTGCCCGCTGTT
TTCGTTCACGACTACGCCACGGCCAGCCCTCCCTGTTGTGTAACGGCGAT
GACCAACAATAACAGCAGTGGAGAGGTTGTGACACCGCAGTTTTTGAACC
TCCCTGCTGACCTTTTGGCCTATCTACCGTAATCGGCGGAGTTTTGTCCC
CGGAGGGGGAATCTTTTTTTGGGCTGAAACCAGTCCCCCCGGGGGGAAAT
TGACGACAGGGGGGGGATCTTTTTTTTTTTTAGACCGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig766:58923..73710- >mRNA_P-littoralis_Contig766.19.1 ID=mRNA_P-littoralis_Contig766.19.1|Name=mRNA_P-littoralis_Contig766.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=969bp|location=Sequence derived from alignment at P-littoralis_Contig766:58923..73710- (Pylaiella littoralis U1_48)
ATGTCTATGTCGTCCTTCGGAGGGGGGTCGGGCTCCATGCTGGTGCTAAA
CGATCCGGCGGCGCAGCTTTCGAGCGTGGAGGGGAAAGCCGGCGCACCTG
CCGCACCGGTCACGAACCTCTCGGCCTTCGCCAGCAGCAACGACATCGTT
GTCAAGGTTCACCCGATGGTTCTGTTTTCCGTGTTGGATCACTACCTCCG
ACGACCGGAGAACCAAAAGCGCGTCATCGGCACCCTGCTCGGCACGGTTA
CCGCGAACGTCGTCGAGATCACGAACTCGTTCGCGGTGCCGCACCTGGAG
AAGAACAACGAGGTAGCCGTGGGGAAGGACTTCAACAAGTCCATGCTGGC
GTTGCAGCAGAGGGTCAACGGCAGAGAATCCGTGGTGGGCTGGTACGCAA
CATCCTTCGACGGGACTCTTATCGTGGACGACTCCTCTCTGATTCACGAC
TTTTACACCGGGGAGTGCGAGCGACCGGTTCACCTCGTGGTGGATACCGC
ATTGAAGAACAACATTGTCGGCTGCAAGGCGTTCATCAGCACACCTCTAG
AGATCGCCGGCGCCGCTCTGGCCAACGTGTTTCACGAGGTGAAGGTAAAT
CTGGTGTCGGCAGAGGCAGAGCGGATCTGCATCGACCGAATGGTGAAGGG
GCAGGATGAGCCGTTCACGTCACCGGAGGGGCTTGCGGAGGTGGACAGCA
GGATGGCGAGCTTGGAAACGTCGATGCAGCGGTTGATGACGATGTTGCAA
CACGCAGAAGAGTATGTCGGGACTGTCGTGGATGGGAAGCTGCCTGCCGA
CCCTCACATGGGCCGTAAGCTGGCTGACACTCTGGCGGCGGTACCGCGGA
TGAGACCCGAGGCGTTCAACCGGCTGTTCGACGACAACCTGCAGGACCTT
CTGATGGTTTCGTACCTCAGCAGCCTTACAAGAACACAGCTCGCGATAGC
GGAGAAGTTGGCAACTTGA back to top
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