mRNA_P-littoralis_Contig766.12.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig766.12.1
Unique NamemRNA_P-littoralis_Contig766.12.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.060e-55
Identity = 133/343 (38.78%), Postives = 179/343 (52.19%), Query Frame = 1
Query:   34 IDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWV--------TQDLMRRPGSTSR-DQRPSVLVLDDFRCHREE 870
            + +K I +W  QE +L    S     SK + +H+G +A T + E A+VD IN  RK         VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSI R+ SVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV  DG+ V P II+KG PF+  T +                         G+PA G+S GVQ+ SW    + + W+            M RP + S   QRP +LVLDDF+CH++E
Sbjct:   89 VPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDE 430          
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.130e-53
Identity = 127/340 (37.35%), Postives = 177/340 (52.06%), Query Frame = 1
Query:   22 KVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAA-VTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDLMRRPGSTSR-DQRPSVLVLDDFRCHREE 870
            KV  + +K I +W   EA+L    S     SK + +H+G +  T + E      ++      A  +    VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSI R+TSVGQK P+G+EG AWA + KL  +L + A E                               +F  + NMDQ P+Q EMP +TT++KTG K A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF+  T +                         G+PA G+S GVQ+ SW D  + + W++     RP + S   QRP +LVLDDF+CH +E
Sbjct:  124 KVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDE 463          
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.220e-52
Identity = 129/340 (37.94%), Postives = 173/340 (50.88%), Query Frame = 1
Query:   22 KVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDLMRRP--GSTSRDQRPSVLVLDDFRCHREE 870
            KV  + ++ I +W   E  L A  S     SK + +H   +A   ++E A+V+ IN  RK+         M KLL   P   GG+ ++ +PE+      +F +WY RF KR++FSI R+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I TGG+ EK R+T+ LAV  DG+KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+      RP  GS  R QR  +LVLDDF+CH+++
Sbjct:   85 KVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDD 422          
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.320e-52
Identity = 132/345 (38.26%), Postives = 174/345 (50.43%), Query Frame = 1
Query:   43 KLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV---------------------------------GGTNNFGYPA----GGISLGVQKSSWCDGTQSDEWVTQDLMRRPGSTSR-DQRPSVLVLDDFRCHREE 870
            K I +W  QE +L    S     SK + +H+G +A T + E A+VD +N  RK         VM KLL   P   GGM +  +PE+   F+ +FN+WY RF KR+ FSI R+TSVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGGE EK R+T+VLAV  DG+KV PRII+KG PF+                                 GG  N   P     G   +   + SW D  + + W+      RP + S   QRP +LVLDDF+CH++E
Sbjct:  120 KRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDE 463          
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 4.420e-52
Identity = 114/269 (42.38%), Postives = 150/269 (55.76%), Query Frame = 1
Query:  229 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDLMRRPGSTSR-DQRPSVLVLDDFRCHREE 870
            M KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSI R+TSVGQK P+G EG AWA + KLR +L + A E                               +F  L NMDQTP+Q E+P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++     RP + S   QRP +LVLDDF+CH++E
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDE 268          
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 4.720e-51
Identity = 130/335 (38.81%), Postives = 170/335 (50.75%), Query Frame = 1
Query:   22 KVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDLMRRP--GSTSRDQRPSVLVLDDFR 855
            KV  +D++ I  W  +EA +    K K   SK +S+H G    T EVE  + D IN  R+         VM KLL   P   GG+ +    E+   F+ +F  WY+RF +RH  SI R+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T+ LAV  DG KV  RII+KG PF+                            NFGYP  G+S GVQ+ SW D  +   W+++    RP  GS  + QR S+LVLDDFR
Sbjct:  104 KVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFR 436          
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 6.340e-51
Identity = 130/355 (36.62%), Postives = 172/355 (48.45%), Query Frame = 1
Query:   49 IRDWESQEAELVAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDLMRRP--GSTSRDQRPSVLVLDDFRCHREE 870
            +RD ES  A + A  K    SK + +H G +A T ++E A+V+ IN  RK+        VM KLL   P   GG+ ++ +PE+   F+ +F +WY RF KR++FSI R+TSVG + P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I TG                            EK R+T+ LAV  DG KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+      RP  GS  R QR  +LVLDDF+CH+++
Sbjct:   31 VRDEESLRANVSANPK---LSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDD 381          
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 3.450e-50
Identity = 110/269 (40.89%), Postives = 145/269 (53.90%), Query Frame = 1
Query:  229 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDLMRRPGSTSR-DQRPSVLVLDDFRCHREE 870
            M KLL   P   GGM +  +P +   F+ + N+WY RF KR+ FSI R+TSVGQK P+G+EG AWA + KLR +L   A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF+                               +PA G+S GVQ+ SW D  + + W++     RP + S   QRP +LVLDDF+CH++E
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDE 268          
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 8.910e-45
Identity = 125/341 (36.66%), Postives = 164/341 (48.09%), Query Frame = 1
Query:   22 KVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDLMRRP--GSTSRDQRPSVLVLDDFRCHREES 873
            KV G+D++ +  W  +EA +    K K   SK +S+H G    T EVE  + D IN       A +   ++A                        F+ +F  WY+ F +RH FSI R+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T  LAV  DG KV  RII+KG PF+                             FGYP  G+   VQ+ SWCD  +   W+++    RP  GS  + QR S+LVLDDFRCHR ES
Sbjct:   28 KVLGVDRRRVITWIGEEATMKKLVKEKPKLSKAKSIHVGMAPTTAEVEQDLEDCIN----EQLAASAGEILA------------------------FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSES 338          
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Match: A0A6H5JFD9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD9_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.330e-42
Identity = 104/242 (42.98%), Postives = 135/242 (55.79%), Query Frame = 1
Query:   49 IRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV 681
            I +W  QE +L    S     SK + +H+G +A T   E A+VD I   RK         VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSI R+TSV QK  +G+EG A A + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF+
Sbjct:  107 IIEWLKQEEQLKEKVSANPKFSKAKQVHSGGKASTVHAEQALVDYIKEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVRQKLQKGYEGMASATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFI 347          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig766.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTG5_9PHAE1.060e-5538.78DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE2.130e-5337.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Y4_9PHAE1.220e-5237.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ8_9PHAE2.320e-5238.26DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE4.420e-5242.38DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE4.720e-5138.81DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE6.340e-5136.62DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE3.450e-5040.89DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE8.910e-4536.66Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JFD9_9PHAE2.330e-4242.98Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig766contigP-littoralis_Contig766:24107..25798 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size998
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue9.91e-31
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size660
COG categoryCH
BRITEko00000,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig766.12.1prot_P-littoralis_Contig766.12.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig766 24217..25570 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791580.4677875-UTR-P-littoralis_Contig766:24106..242161680791580.4677875-UTR-P-littoralis_Contig766:24106..24216Pylaiella littoralis U1_48UTRP-littoralis_Contig766 24107..24216 -
1680791580.5427-UTR-P-littoralis_Contig766:25570..257981680791580.5427-UTR-P-littoralis_Contig766:25570..25798Pylaiella littoralis U1_48UTRP-littoralis_Contig766 25571..25798 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791580.483279-CDS-P-littoralis_Contig766:24216..244091680791580.483279-CDS-P-littoralis_Contig766:24216..24409Pylaiella littoralis U1_48CDSP-littoralis_Contig766 24217..24409 -
1680791580.4947917-CDS-P-littoralis_Contig766:24478..245821680791580.4947917-CDS-P-littoralis_Contig766:24478..24582Pylaiella littoralis U1_48CDSP-littoralis_Contig766 24479..24582 -
1680791580.5093486-CDS-P-littoralis_Contig766:25102..252191680791580.5093486-CDS-P-littoralis_Contig766:25102..25219Pylaiella littoralis U1_48CDSP-littoralis_Contig766 25103..25219 -
1680791580.5214658-CDS-P-littoralis_Contig766:25324..255701680791580.5214658-CDS-P-littoralis_Contig766:25324..25570Pylaiella littoralis U1_48CDSP-littoralis_Contig766 25325..25570 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig766.12.1

>prot_P-littoralis_Contig766.12.1 ID=prot_P-littoralis_Contig766.12.1|Name=mRNA_P-littoralis_Contig766.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=220bp
MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIGRKT
SVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAIFALLYNMDQTPIQAEMP
PDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF
VGGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDLMRRPGSTSRDQRP
SVLVLDDFRCHREESSKRS*
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mRNA from alignment at P-littoralis_Contig766:24107..25798-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig766.12.1 ID=mRNA_P-littoralis_Contig766.12.1|Name=mRNA_P-littoralis_Contig766.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1692bp|location=Sequence derived from alignment at P-littoralis_Contig766:24107..25798- (Pylaiella littoralis U1_48)
TCGGAAGGCGTGGTGCGGGGGAAGGTGTTCGGCATCGACAAGAAGCTGAT CCGGGACTGGGAGAGCCAGGAGGCAGAGCTTGTGGCGTTTTCGAAGAAGG AGAACGCAAGCAAGCAGCGGTCGTTGCACACTGGACGCGAGGCTGACACG AAGGAGGTGGAGGTGGCCATAGTGGACGAGATCAACACGCTCAGGAAAAA CGGTGCTGCTGTGACCCGGGACCTCGTCATGGCCAAGCTTCTCTCCGAGA TGCCAACCTTTTCAGGGGGCATGCCGTCCCAAGACGAGCCGGAGAAGATG GAAAAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAAGAG GCACCGGTTCTCGATCGGACGCAAGACGAGCGTGGGGCAGAAGAAGCCGG AAGGATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGCTTCGCTCAAGC CTGCGTGAGCACGCGCAGGAAGCCGTTCTCTTGGAGAGGGCAGCCCAGGC AGCGAAGGACGGAGGGACCGTTGAGATCGAGATGGACGTCATCGCAACTG CGGAGGAACTTCTGGCTGTTCAGGGCAAGATCTTCGCCCTTCTGTACAAC ATGGACCAGACCCCGATCCAGGCTGAGATGCCGCCGGACACCACGGTGGA GAAGACTGGTACGAAGAGCGCTTGCATCACGACAGGAGGTGAGACGGTGT ACTAAAGGTATTTCGATTGTTGAAATTCAGTTCAAACCAACATGGTGGAG ATTTTCTGACGATGGAACAAGCGGGGAATTACAAATTTGCCGACGGCGGA AAAACGGGGAATTATAATATTTTGCATTGCTTCTGCCGTCACGTGCACGC TTTCGTTCTTCTATTGCCTGCAAGTACGGTACGTACTGCTGTATCGCCTG TCCCTTCGAACTACCGGTACACAGCGATGAAATTATTCATATGGTATTCC GCTGAAGTATTTTTTTTAATATACATATGTTTTGGGGGGCAATATATATT TTACCGTATACACCGGATTTTGTTTTTATTTTACTTTTTATGCTGTGGTA GGCATTACACCCCAGGAGTTAAAGGTGTGTGTTTGTTTTTTATTATTATT TATTTTTTGTTTGTTGTGGCAGGCAATACGATTAATAATTGTACTGCTTT GCGGAGTATTTTCTTTTAACACAATTTCCTTTGTTTGCATACGCCCCAAT TTTCGCACCAGGCAAGGAGAAGCTGCGGTACACCGTGGTGCTAGCTGTCC GGGGTGATGGACAGAAGGTGCGGCCGCGCATCATCTACAAGGGGAACCCT TTTGTCGGGGGTACCAACAAGTCAGGCTCAGCCAAGAAGCCTGGCAAGAA CAGCCTGTCGTACGAGCACCTCCCAGACAAGCGGACGAGCTTCGGCTACC CGGCTGGCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGTGGTGCGACGGC ACCCAGTCCGACGAGTGGGTAACCCAGGACTTAATGCGCCGCCCAGGGTC TACCTCCAGAGATCAGCGTCCCAGCGTTCTCGTGCTCGACGACTTCAGGT GCCACCGGGAAGAGAGTTCCAAAAGAAGCTAATGGACCTGGCCAAGACGC TGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTGCCAGCCGCTCGAC CGGAACATCAACAAGGAGTTCAAGCGAGGTGTTCGGGCCAGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig766:24107..25798-

>mRNA_P-littoralis_Contig766.12.1 ID=mRNA_P-littoralis_Contig766.12.1|Name=mRNA_P-littoralis_Contig766.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=660bp|location=Sequence derived from alignment at P-littoralis_Contig766:24107..25798- (Pylaiella littoralis U1_48)
ATGGCCAAGCTTCTCTCCGAGATGCCAACCTTTTCAGGGGGCATGCCGTC
CCAAGACGAGCCGGAGAAGATGGAAAAATTTCAGAAGCGTTTCAACGCCT
GGTACTACAGGTTCCTCAAGAGGCACCGGTTCTCGATCGGACGCAAGACG
AGCGTGGGGCAGAAGAAGCCGGAAGGATGGGAGGGCAAGGCGTGGGCATT
CATCCAGAAGCTTCGCTCAAGCCTGCGTGAGCACGCGCAGGAAGCCATCT
TCGCCCTTCTGTACAACATGGACCAGACCCCGATCCAGGCTGAGATGCCG
CCGGACACCACGGTGGAGAAGACTGGTACGAAGAGCGCTTGCATCACGAC
AGGAGGTGAGACGGAGAAGCTGCGGTACACCGTGGTGCTAGCTGTCCGGG
GTGATGGACAGAAGGTGCGGCCGCGCATCATCTACAAGGGGAACCCTTTT
GTCGGGGGTACCAACAACTTCGGCTACCCGGCTGGCGGCATCAGCCTCGG
GGTGCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGTGGGTAA
CCCAGGACTTAATGCGCCGCCCAGGGTCTACCTCCAGAGATCAGCGTCCC
AGCGTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGAGTTCCAA
AAGAAGCTAA
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