mRNA_P-littoralis_Contig762.26.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5JLE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE6_9PHAE) HSP 1 Score: 372 bits (955), Expect = 5.150e-122 Identity = 178/241 (73.86%), Postives = 199/241 (82.57%), Query Frame = 2
Query: 566 SRISMMMPVYPQTTLIIVAIAHFSPQILPGGGRVHVTETWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGN-GEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 1285
S I+MMMPVYPQTTL+ VAI HF+PQ GGGRVHVTETWI ASEDM HDCDFHLHGLA++ADYYL +GS ATAS+R RTPRIHM TDGCGKQYKG+RNFRFLADSVRQIGFF+D HFAATSHFKGCHDGIG +A NAMK ERFGKRI+GA+ VV F R FFR+K G+ GEE MRKYFA WSPYR+R+VHVE IG EI RP S L G++GT MYHFAGAN P +TTT+GL+D
Sbjct: 69 SFINMMMPVYPQTTLM-VAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRADGSGATASSRKEGRTPRIHMLTDGCGKQYKGRRNFRFLADSVRQIGFFIDQHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFWRCFFREKAGSEGEEGMRKYFAKWSPYRMRRVHVEFIGNKEISRPNSVLAGLEGTLDMYHFAGANNPKWDGSTTTEGLED 308
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5L2L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L6_9PHAE) HSP 1 Score: 374 bits (961), Expect = 4.820e-120 Identity = 180/246 (73.17%), Postives = 205/246 (83.33%), Query Frame = 2
Query: 566 SRISMMMPVYPQTTLIIVAIAHFSPQILPGGGRVHVTETWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGN-GEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQ-DIELV 1297
S ISMMMP+YPQTTL+ VAI HF+PQ G GRVHVTETWI ASE+M HDCDFHLHGLA++ADYYL G+GS+ATA+AR RTPRI+MFTDGCGK+YKG+RNFRFLADSVRQIGFF+DHHFA TSHFKGCHDGIG +A NAMK E F KRI+GA+ VV FLR FFR+K G+ G E MRKYFA WSPYR+R+VHVE IGK EIYRP S L GI+GTR MYHFAGAN P +TTT+GL+ D +LV
Sbjct: 330 SFISMMMPIYPQTTLM-VAIVHFNPQTHVGDGRVHVTETWIFASENMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIYMFTDGCGKRYKGRRNFRFLADSVRQIGFFIDHHFAVTSHFKGCHDGIGGVAKNAMKRREIFDKRIMGADGVVSFLRSFFREKAGSEGGEGMRKYFAKWSPYRMRRVHVECIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLENDCKLV 574
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 368 bits (944), Expect = 1.390e-115 Identity = 168/229 (73.36%), Postives = 193/229 (84.28%), Query Frame = 2
Query: 599 QTTLIIVAIAHFSPQILPGGGRVHVTETWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGN-GEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQ 1282
+TT ++VAI HF+PQ GGGRVHVTETWI ASEDM H CDFHLHGLAK+ADYYL G+GS+ATA+AR RTPR+HMFTDGCGKQYKG+RNFRFLADSVRQIGFF+DHHFAATSHFKGCHDGIG +A NAMK ERFGKRI+GA+ V FLR FF +K G+ GEE MR+YFA WSPYR+R+VH E IGK EIYRP S L+G++GTR MYHFAGAN P +TTT+GL+
Sbjct: 546 RTTTLMVAIVHFNPQTHMGGGRVHVTETWIFASEDMGHGCDFHLHGLAKMADYYLRGDGSEATAAARKEGRTPRLHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVFSFLRSFFEEKAGSEGEEGMRRYFAKWSPYRMRRVHFEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTTTEGLE 774
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5JFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY7_9PHAE) HSP 1 Score: 335 bits (858), Expect = 1.330e-110 Identity = 157/225 (69.78%), Postives = 182/225 (80.89%), Query Frame = 2
Query: 614 IVAIAHFSPQILPGGGRVHVTETWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGN-GEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 1285
+ AI HF+PQ GGG VHVTETWI ASEDM HDCDFHLHGLA++AD+YL G+GS+ TA+AR RTPRIH+FTDGCGKQYKG+RN RFLADSVRQIGFF+DH FAATSHF G GIG +A NAMK ERFGKRI+GA+ VV FLR FFR+K G+ GEE MR+YFA WSPY +R+VHVE IGK EIYRP S L+G++GTR MYHFAGAN P +T+T G +D
Sbjct: 1 MAAIVHFNPQTHVGGGSVHVTETWIFASEDMTHDCDFHLHGLARMADHYLRGDGSETTAAARKEGRTPRIHIFTDGCGKQYKGRRNVRFLADSVRQIGFFIDHDFAATSHFNG--GGIGGVAKNAMKRRERFGKRIMGADGVVRFLRSFFREKAGSEGEEGMRRYFAKWSPYPMRRVHVEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPEWDGSTSTKGRED 223
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5L7F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F4_9PHAE) HSP 1 Score: 329 bits (844), Expect = 2.080e-107 Identity = 149/209 (71.29%), Postives = 174/209 (83.25%), Query Frame = 2
Query: 662 RVHVTETWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGN-GEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 1285
+VHVTETWI ASEDM HDCDFHLHGLA++ D+YL+G+G +ATA+AR DR PRIHMFTDGCGKQYKG+RNFRFLADSVRQIGFF+DHHFAATSHFK CHDGIG +A NAMK ERF KRI+GA+ VV FLR FFR+K G+ GEE MR++FA WSPYR+R+VHVE +GK EIYRP S L+G++GTR MYH AG N P +T+T G D
Sbjct: 121 KVHVTETWIFASEDMAHDCDFHLHGLARMTDHYLHGDGREATAAARKEDRKPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKDCHDGIGGVAKNAMKRRERFVKRIMGADGVVSFLRSFFREKAGSEGEEGMRRFFARWSPYRMRRVHVEFMGKKEIYRPNSILEGVEGTREMYHLAGPNTPEWDGSTSTKGRGD 329
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5JQG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG9_9PHAE) HSP 1 Score: 322 bits (826), Expect = 1.120e-104 Identity = 146/203 (71.92%), Postives = 170/203 (83.74%), Query Frame = 2
Query: 680 TWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGN-GEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 1285
TWI SEDM HDCDFHLHGL ++AD+YL G+GS+ATA+AR RTPRIH+FTDGCGKQYKG+R+FRFLADSVRQIG F+DHHFAATSHFKGCHDGIG +A NAMK ERFGKRI+ AN VV FLR FFR+K G+ GEE MR+YFA WSPYR+R+VHVE IGK E+YRP S L+G++GTR MYHFAGAN P +T+T G +D
Sbjct: 95 TWIFVSEDMAHDCDFHLHGLVRMADHYLRGDGSEATAAARKEGRTPRIHIFTDGCGKQYKGRRSFRFLADSVRQIGSFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMVANGVVSFLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEIIGKKEVYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGRED 297
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5KAT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT3_9PHAE) HSP 1 Score: 325 bits (833), Expect = 1.280e-104 Identity = 150/202 (74.26%), Postives = 172/202 (85.15%), Query Frame = 2
Query: 599 QTTLIIVAIAHFSPQILPGGGRVHVTETWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGN-GEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGI 1201
+TT ++VAI HF+PQ GGGRVHVTETWI ASE M HDCDFHLHGLA++ADYYL G+GS+ATA+AR RTPRIHMFT GCGKQYKG+RNFRFLADSVRQIGFF+DHHFAATSHFKGCHDGIG +A NAMK ERFGKRI+GA+ VV FLR FFR++ G+ GEE+MR+YFA WSPYR+R+VHVE IGK YRP S L G+
Sbjct: 209 RTTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEHMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTAGCGKQYKGRRNFRFLADSVRQIGFFMDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREEAGSEGEENMRRYFAKWSPYRMRRVHVEFIGKKVTYRPNSVLAGM 410
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5L293_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L293_9PHAE) HSP 1 Score: 332 bits (850), Expect = 2.250e-103 Identity = 150/209 (71.77%), Postives = 175/209 (83.73%), Query Frame = 2
Query: 662 RVHVTETWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGN-GEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 1285
+ HVTETWI SEDM HDCD HLHGLA++AD+YL G+GS+ATA+AR RTPRIH+FTDGCGKQYKG+R+FRFLADSVRQIG F+DHHFAATSHFKGCHDGIG +A NAMK ERFGKRI+GA+ VV FLR FFR+K G+ GEE MR+YFA WSPYR+R+VHVE I K EIYRP S L+G++GTR MYHFAGAN P +T+T G +D
Sbjct: 395 KAHVTETWIFVSEDMAHDCDLHLHGLARMADHYLRGDGSEATAAARKEGRTPRIHIFTDGCGKQYKGRRSFRFLADSVRQIGSFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEFISKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGRED 603
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5JYM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM9_9PHAE) HSP 1 Score: 316 bits (809), Expect = 7.750e-103 Identity = 148/224 (66.07%), Postives = 172/224 (76.79%), Query Frame = 2
Query: 614 IVAIAHFSPQILPGGGRVHVTETWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 1285
+VAI HF+PQ GGGRVHVTE+WI ASED+ HDCDFHLHG+A++AD+YL G+GS+ATA+AR RTPRIHMFTDGCGKQYKG+RNFRFL DSVRQIGFF+DHHFAATSHFK CHDGIG +A NAM ERFGKRI+GA+ G G YFA WSPYR+R+VHVE IGK EIYRP S +G++GTR MYHFAGAN P +T+T G +D
Sbjct: 1 MVAIVHFNPQTHVGGGRVHVTESWIFASEDIAHDCDFHLHGVARMADHYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLTDSVRQIGFFIDHHFAATSHFKDCHDGIGGVAKNAMNRRERFGKRIMGAD--------------GGG------YFAKWSPYRMRRVHVEFIGKKEIYRPNSIPEGVEGTREMYHFAGANTPKWDRSTSTKGRED 204
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Match: A0A6H5KTJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ4_9PHAE) HSP 1 Score: 313 bits (803), Expect = 6.850e-98 Identity = 147/229 (64.19%), Postives = 169/229 (73.80%), Query Frame = 2
Query: 599 QTTLIIVAIAHFSPQILPGGGRVHVTETWILASEDMKHDCDFHLHGLAKIADYYLYGEGSDATASARNNDRTPRIHMFTDGCGKQYKGKRNFRFLADSVRQIGFFVDHHFAATSHFKGCHDGIGCIANNAMKNHERFGKRIVGANKVVDFLRKFFRQKGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 1285
+T ++VAI HF+PQ GGGRVHVTETWI ASEDM HDCDFHLHGLA++AD+YL G+GS+ATA+AR RTPRIHM TDGCGKQYKG+RN RFLADSVRQIGFF++HHFAATSHFKGCHDGIG +A NAMK E GEE RKYFA WSPYR+R+VHVE IGK EIYRP S L+G++GTR MYH AGAN P +T+T G +D
Sbjct: 173 RTATLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADHYLRGDGSEATAAAREKGRTPRIHMLTDGCGKQYKGRRNSRFLADSVRQIGFFINHHFAATSHFKGCHDGIGGVAKNAMKRRE------------------------SEGEESTRKYFAKWSPYRMRRVHVEFIGKKEIYRPNSILEGVEGTREMYHCAGANTPKRDGSTSTKGRED 377 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig762.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig762.26.1 >prot_P-littoralis_Contig762.26.1 ID=prot_P-littoralis_Contig762.26.1|Name=mRNA_P-littoralis_Contig762.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=240bp MMMPVYPQTTLIIVAIAHFSPQILPGGGRVHVTETWILASEDMKHDCDFHback to top mRNA from alignment at P-littoralis_Contig762:117518..118814+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig762.26.1 ID=mRNA_P-littoralis_Contig762.26.1|Name=mRNA_P-littoralis_Contig762.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1297bp|location=Sequence derived from alignment at P-littoralis_Contig762:117518..118814+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig762:117518..118814+ >mRNA_P-littoralis_Contig762.26.1 ID=mRNA_P-littoralis_Contig762.26.1|Name=mRNA_P-littoralis_Contig762.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=720bp|location=Sequence derived from alignment at P-littoralis_Contig762:117518..118814+ (Pylaiella littoralis U1_48)back to top |