mRNA_P-littoralis_Contig761.35.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A6H5JAJ7_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ7_9PHAE) HSP 1 Score: 110 bits (275), Expect = 2.610e-26 Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 2
Query: 2 SDGGEYEAVDNPGVYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNIC 205
SDG EY+AV GVY LATDLALVWDPEFKAQT+ YA++N+ FLKEF AWT +MNADR+DGP+ N+C
Sbjct: 426 SDGQEYQAVGKSGVYVLATDLALVWDPEFKAQTVMYAEDNDQFLKEFASAWTAVMNADRYDGPTGNVC 493
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A6H5JXZ4_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ4_9PHAE) HSP 1 Score: 107 bits (268), Expect = 3.710e-25 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 2
Query: 2 SDGGEYEAVDNPGVYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNIC 205
S+G E++AV G+Y LATDLALVWDPEFKAQT+ YA++NE FLK+F AWT +MNADRFDGP+ N+C
Sbjct: 631 SNGQEFQAVGRSGIYVLATDLALVWDPEFKAQTVMYAEDNEQFLKDFASAWTAVMNADRFDGPTGNVC 698
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A6H5JP97_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP97_9PHAE) HSP 1 Score: 103 bits (257), Expect = 5.510e-24 Identity = 46/67 (68.66%), Postives = 54/67 (80.60%), Query Frame = 2
Query: 5 DGGEYEAVDNPGVYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNIC 205
DG EY+AV GVY L TDLALVWDPEFKAQ++ YAQ+N+ F EFG AWT LMNADRFDGP+ ++C
Sbjct: 370 DGKEYQAVGKSGVYVLDTDLALVWDPEFKAQSILYAQDNDYFRHEFGSAWTALMNADRFDGPTGSMC 436
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A6H5K5Q0_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Q0_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 3.160e-21 Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 2
Query: 14 EYEAVDNPGVYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNIC 205
EY+AV GVYALATDLALVWDPE KAQT+ YA++N+ FLKEF AWT +M ADR DGP+ ++C
Sbjct: 1240 EYQAVGTQGVYALATDLALVWDPELKAQTVVYAEDNDEFLKEFASAWTAVMIADRCDGPTGDVC 1303
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A6H5K428_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K428_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 1.460e-18 Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 2
Query: 5 DGGEYEAVDNPGVYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFD 184
DG EY+AV GVY LATDLALVWD EFKAQ++ AQ+N+ FL+ FG AWT MNADRFD
Sbjct: 471 DGTEYQAVGKSGVYVLATDLALVWDAEFKAQSILCAQDNDYFLEHFGSAWTAWMNADRFD 530
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A7S3ZIM4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZIM4_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 1.290e-15 Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 2
Query: 14 EYEAVDNPGVYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNIC 205
+Y+AV +Y L TDL + WDPE +A +N+LFL EF AWT LMNADRFDGP +N+C
Sbjct: 33 QYKAVGKD-LYMLQTDLVIRWDPEMLTAAQDFASDNQLFLAEFRAAWTRLMNADRFDGPFKNLC 95
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A835VTC5_CHLIN (PEROXIDASE_4 domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VTC5_CHLIN) HSP 1 Score: 78.6 bits (192), Expect = 6.890e-15 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 2
Query: 14 EYEAVDNPGVYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNIC 205
E+ A G++ TDLA+ WDPE A ++A +N+ FL+ F AWT LMNADRFDGP RN+C
Sbjct: 614 EFAAAGGKGLFMTPTDLAIKWDPEMLAIAQEFAADNKAFLQTFAGAWTRLMNADRFDGPDRNLC 677
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A6B2KZL8_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KZL8_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 7.790e-11 Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 2
Query: 14 EYEAVDNPGVYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNIC 205
EY+AV +Y L DLA+ WD F A +A + +F++EF AW +MNADRFDGP+ N+C
Sbjct: 575 EYQAVGKE-LYMLPMDLAIRWDDTFLAIAQDFASDQSMFVREFLSAWVKMMNADRFDGPTGNLC 637
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A7S4BLV4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BLV4_CHRCT) HSP 1 Score: 64.3 bits (155), Expect = 6.860e-10 Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 2
Query: 41 VYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNICHRG 214
+Y L TDLAL++D E A +A + E F F AW +MNADRFDGP+ N+C RG
Sbjct: 537 LYRLKTDLALLYDAELAAIATDFAADIEAFRDAFAAAWAKIMNADRFDGPTGNLCDRG 594
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Match: A0A7S4BLV5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BLV5_CHRCT) HSP 1 Score: 64.3 bits (155), Expect = 6.960e-10 Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 2
Query: 41 VYALATDLALVWDPEFKAQTMKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNICHRG 214
+Y L TDLAL++D E A +A + E F F AW +MNADRFDGP+ N+C RG
Sbjct: 655 LYRLKTDLALLYDAELAAIATDFAADIEAFRDAFAAAWAKIMNADRFDGPTGNLCDRG 712 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig761.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig761.35.1 >prot_P-littoralis_Contig761.35.1 ID=prot_P-littoralis_Contig761.35.1|Name=mRNA_P-littoralis_Contig761.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=43bp MKYAQNNELFLKEFGDAWTTLMNADRFDGPSRNICHRGRRLS*back to top mRNA from alignment at P-littoralis_Contig761:122348..122647- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig761.35.1 ID=mRNA_P-littoralis_Contig761.35.1|Name=mRNA_P-littoralis_Contig761.35.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=300bp|location=Sequence derived from alignment at P-littoralis_Contig761:122348..122647- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig761:122348..122647- >mRNA_P-littoralis_Contig761.35.1 ID=mRNA_P-littoralis_Contig761.35.1|Name=mRNA_P-littoralis_Contig761.35.1|organism=Pylaiella littoralis U1_48|type=CDS|length=129bp|location=Sequence derived from alignment at P-littoralis_Contig761:122348..122647- (Pylaiella littoralis U1_48)back to top |