mRNA_P-littoralis_Contig76.66.4 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: D7FQI8_ECTSI (Sec61 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQI8_ECTSI) HSP 1 Score: 844 bits (2181), Expect = 1.330e-306 Identity = 425/473 (89.85%), Postives = 450/473 (95.14%), Query Frame = 3
Query: 114 MRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQEQKELMGAAAF 1532
MRFLH+MRPIMCVLPEVSAPDRKV+F++RMGWTLGM++LFVWASN LYG+PSGL SSMPSDIMRIVLASGHGT+MDLGITPIITSSMAMQL+AGA +IDVNQ MKEDRALFGGAQKLFGILLTLAEA+AFVVSGMYGP+SALGAGNAILIVCQLFLMGV LILMDQVLQKGWGIGSG+SLFMC N+CSTVWWKTFSW SVTTARG E EGAF AIFHLL TR +KLRA+KDVFFRTGLPNLVNLAATAAVA AVIYFQKWRIELPVK QKYRGQEGRFPIKL YTSNMPLILQ+A V+NLYMISQL NDRSSSSILIRLLGQWEE+D Y GKSVPVGGIAYYITPPATLSN+FTDPFHSIFYLTF+LMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTAL HVLDRYIPPAAAFGGMC+GAL VAADLFGAVGSGTGIIMAVTII+ YTEIF+QEQKELMGA+AF
Sbjct: 1 MRFLHLMRPIMCVLPEVSAPDRKVNFKERMGWTLGMMILFVWASNTRLYGVPSGLASSMPSDIMRIVLASGHGTVMDLGITPIITSSMAMQLLAGAHIIDVNQSMKEDRALFGGAQKLFGILLTLAEAVAFVVSGMYGPLSALGAGNAILIVCQLFLMGVMLILMDQVLQKGWGIGSGVSLFMCANICSTVWWKTFSWVSVTTARGVEKEGAFFAIFHLLLTRPDKLRALKDVFFRTGLPNLVNLAATAAVAMAVIYFQKWRIELPVKSQKYRGQEGRFPIKLFYTSNMPLILQSALVANLYMISQLVNDRSSSSILIRLLGQWEEMDGYPGKSVPVGGIAYYITPPATLSNVFTDPFHSIFYLTFVLMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALHHVLDRYIPPAAAFGGMCIGALTVAADLFGAVGSGTGIIMAVTIIHQYTEIFMQEQKELMGASAF 473
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: A0A6H5L214_9PHAE (Plug_translocon domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=A0A6H5L214_9PHAE) HSP 1 Score: 616 bits (1589), Expect = 1.430e-216 Identity = 293/473 (61.95%), Postives = 387/473 (81.82%), Query Frame = 3
Query: 114 MRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQEQKELMGAAAF 1532
MRFLH++RP+MCVLPEV+ PDRK+ FR+++ WT+ L +F+ +P+YG+ S SS P MR++LAS GT+M+LGI+PI+TSS+ MQL+AG+++I+VNQ +KEDRALF GAQKLFGIL+T+ EA+A+VVSGMYG +S LGAGNAILI+CQLF G+ +I++D++LQKG+G+GSGISLF+ TN+C T+ WK FS +++ T RG E EGA +A+FHL+ TR +K+RA+++ F+R LPN+ NL ATA V VIYFQ WR++LPVKYQKYRGQ+G +PIKL YTSNMP+ILQ A VSNLY +SQL ++R + ++L+RL+G+W E++ G SVPVGG+AYYI+PP T++ I DP H++ Y+TFIL +CA+FSK W+EVSGS++ DVA+QLR+QQMVMKGHRD ALVHVL+RYIP AAAFGGMC+GAL VAAD GA+GSGTGI++AVTIIY Y E+F +EQ E MG F
Sbjct: 1 MRFLHLIRPVMCVLPEVAQPDRKIPFREKVLWTVITLFIFLVCCQIPIYGVQSA-KSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVKYQKYRGQQGTYPIKLFYTSNMPVILQTALVSNLYFLSQLLHNRYAGNLLVRLMGRWAEVEGMPGTSVPVGGLAYYISPPTTMAEILKDPVHAVIYITFILTACALFSKTWIEVSGSSAKDVAKQLRDQQMVMKGHRDDALVHVLERYIPTAAAFGGMCIGALTVAADFLGAIGSGTGILLAVTIIYQYYEMFSKEQGEAMGGLGF 472
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: A0A7S2XXJ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXJ1_9STRA) HSP 1 Score: 612 bits (1578), Expect = 6.690e-215 Identity = 293/473 (61.95%), Postives = 385/473 (81.40%), Query Frame = 3
Query: 114 MRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQEQKELMGAAAF 1532
MRFLH++RP+MCVLPEV+ PDRK+ FR++M WT+ L +F+ +P+YGI S SS P +MR++LAS GT+M+LGI+PI+TS + MQL+AG+++I+VNQ +KEDRALF GAQKLFGIL+T+ EA+A+VVSGMYG + LGAGNAILI+ QLF G+ +I++D++LQKG+G+GSGISLF+ TN+C T+ WK FS +++ T RG E EGA +A+FHLL TR +K+RA+K+ F+R LPNL NL AT V VIYFQ WR++LPVKYQKYRGQ+G +PIKL YTSNMP+ILQ A VSNLY +SQL +R S + L++LLG+W++++ SG+SVPVGG+AYYI+PP + + I DPFH++FY++FIL +CA+FSK W+EVSGS++ DVA+QLR+QQMVMKGHRD+ALVHVL+RYIP AAAFGGMC+GAL V AD GA+GSGTGI++AVTIIY Y E+ +EQ E GA F
Sbjct: 1 MRFLHLIRPVMCVLPEVAQPDRKIPFREKMLWTVITLFIFLVCCQIPIYGIQSA-KSSDPFYMMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNQALKEDRALFSGAQKLFGILITIGEAVAYVVSGMYGDLGTLGAGNAILIIAQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAIIALFHLLITRSDKVRALKEAFYRQNLPNLTNLMATVLVFVIVIYFQGWRVDLPVKYQKYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFLSQLLYNRYSGNFLVKLLGRWQDVEGMSGQSVPVGGLAYYISPPNSFTEILADPFHALFYISFILTACALFSKTWIEVSGSSAKDVAKQLRDQQMVMKGHRDSALVHVLNRYIPTAAAFGGMCIGALTVVADFLGAIGSGTGILLAVTIIYQYYEMISKEQGEPTGAFGF 472
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: A0A6V2TM26_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TM26_HETAK) HSP 1 Score: 600 bits (1548), Expect = 2.400e-210 Identity = 290/463 (62.63%), Postives = 380/463 (82.07%), Query Frame = 3
Query: 114 MRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQE 1502
MRFLH++RP+M +LPEV + DRKV FR++M WT+ L +F+ +PLYGI SG SS P MR++LAS GT+M+LGI+PI+TS + MQL+AG+++I+VNQG+KEDRALF GAQKLFGIL+TL EA+A+V+SGMYG ++ LGAGNA+LI+ QLF G+ ++L+D++LQKG+G+GSGISLF+ TN+C T+ WK FS +++ T RG E EGA +A+FHL+ TR +K RA+K+ F+R LPNL NL AT V VIYFQ WR++LPVKYQKYRGQ+G +PIKL YTSNMP+ILQ A VSNLY +SQL +R S + L+RLLG+W+E++ +G+SVPVGG+AYYI+PP +L NI TDP H+IFY TFIL +CA+FSK W+EVSGS++ DVA+QLR+QQMV+KGHRD A+VHVL+RYIP AAAFGGMC+GAL++ AD GA+GSGTGI++AVTIIY Y E+F +E
Sbjct: 1 MRFLHLIRPVMFILPEVESSDRKVPFREKMLWTVITLFIFLVCCQIPLYGIQSG-KSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNQGVKEDRALFNGAQKLFGILITLGEAVAYVISGMYGDLATLGAGNALLIITQLFFAGLVVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLVLTRGDKARAVKEAFYRQNLPNLTNLMATVFVFIIVIYFQGWRVDLPVKYQKYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFLSQLLWNRYSGNFLVRLLGRWQELEGGAGQSVPVGGMAYYISPPQSLGNILTDPLHAIFYFTFILTACALFSKTWIEVSGSSAKDVAKQLRDQQMVIKGHRDAAIVHVLNRYIPTAAAFGGMCIGALSIFADFTGAIGSGTGILLAVTIIYQYYELFTKE 462
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: B7GD39_PHATC (Transport protein Sec61 alpha subunit n=7 Tax=Bacillariophycidae TaxID=33850 RepID=B7GD39_PHATC) HSP 1 Score: 597 bits (1539), Expect = 1.200e-207 Identity = 282/474 (59.49%), Postives = 382/474 (80.59%), Query Frame = 3
Query: 111 TMRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQEQKELMGAAAF 1532
TMRFLH++RP+MCVLPEV++PDRK+ FR+++ WT L +F+ +P+YG+ S SS P MR++LAS GT+M+LGI+PI+TS + MQL+AG+++I+V+ +KEDRALF GAQKLFGIL+T EAIA+VVSGMYG + ++GAGNAILI+ QLF G+ ++ +D++LQKG+G+GSGISLF+ TN+C + WK FS +++ T RG E EGA +A+FHLL TR NK++A+++ F+R LPN+ NL AT + VIYFQ WR+ LPVKYQKYRGQEG +PIKL YTSNMP+ILQ A VSNLY +SQL +R+ ++IL+RLLG+W+E++ +G +PVGGIAYYI+PP + + I DPFH++FYL FIL +CA+FSK W+EVSG+++ DVA+QLR+ QMVMKGHRD+AL+HVL+RYIP AAAFGGMC+GAL+V AD GA+G+GTGI+++VTII+ + E F++EQKE GA F
Sbjct: 87 TMRFLHLIRPVMCVLPEVASPDRKIPFREKLLWTTITLFIFLVCCQIPIYGVQSA-KSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVDYNVKEDRALFSGAQKLFGILITTGEAIAYVVSGMYGDLGSIGAGNAILIIAQLFCAGLIVLTLDELLQKGYGLGSGISLFIATNICENIVWKAFSPTTINTGRGTEFEGAIIALFHLLITRSNKIQALREAFYRQNLPNVTNLLATVLIFVIVIYFQGWRVNLPVKYQKYRGQEGNYPIKLFYTSNMPIILQTALVSNLYFVSQLLYNRAPTNILVRLLGKWQEVEGSAGNKIPVGGIAYYISPPQSFAEIIYDPFHAVFYLVFILTACALFSKTWIEVSGASARDVAKQLRDNQMVMKGHRDSALIHVLNRYIPTAAAFGGMCIGALSVIADFMGAIGTGTGILLSVTIIFQFYEAFVKEQKEGTGAFGF 559
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: A0A7S4MCE0_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4MCE0_9STRA) HSP 1 Score: 587 bits (1514), Expect = 3.480e-205 Identity = 283/474 (59.70%), Postives = 383/474 (80.80%), Query Frame = 3
Query: 114 MRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQEQ-KELMGAAAF 1532
MRFLH++RP+MCVLPEV++PDRK+ FR+++ WT L +F+ +P+YG+ S SS P MR++LAS GT+M+LGI+PI+TS + MQL+AG+++I+VN +KEDRALF GAQKLFGIL+T+ EAIA+VVSGMYG ++ +GAGNA+LI+ QLF G+ ++ +D++LQKG+G+GSGISLF+ TN+C + WK FS +++ T RG E EGA +A+FHLL TR +K+RA+K+ +R LPNL NL AT V VIYFQ WR++LPVKYQKYRGQ+G +PIKL YTSNMP+ILQ A VSNLY +S+L +R+ +++L+RLLG+W+++ E G+S+PVGGIAYYI+PP + + I DPFH++FYL FIL +CA+FSK W+EVSG+++ DVA+QLR+ QMVMKGHRD+AL+HVL+RYIP AAAFGGMC+GAL V AD GA+G+GTGI+++VTIIY + E FL+EQ +E MGA F
Sbjct: 1 MRFLHLIRPVMCVLPEVASPDRKIPFREKVLWTTITLFIFLVCCQIPIYGVQSA-KSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNYNVKEDRALFQGAQKLFGILITVGEAIAYVVSGMYGDLATIGAGNALLIISQLFFAGLIVLTLDELLQKGYGLGSGISLFIATNICENIVWKAFSPTTLNTGRGTEFEGAIIALFHLLITRTDKVRALKEALYRQNLPNLTNLMATVLVFVVVIYFQGWRVDLPVKYQKYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFVSRLLYNRAPTNVLVRLLGKWQDM-EGGGESLPVGGIAYYISPPHSFAEIIYDPFHAVFYLIFILTACALFSKTWIEVSGASARDVAKQLRDNQMVMKGHRDSALIHVLNRYIPTAAAFGGMCIGALTVVADFMGAIGTGTGILLSVTIIYQFYEAFLKEQDEEAMGAFGF 472
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: A0A6U2X7N0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2X7N0_9STRA) HSP 1 Score: 586 bits (1510), Expect = 1.360e-204 Identity = 283/470 (60.21%), Postives = 378/470 (80.43%), Query Frame = 3
Query: 114 MRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQEQKELMGA 1523
MRFLH++RP+MCVLPEV++PDRK+ R+++ WT L +++ +P+YGI S SS P +R+VLAS GTIM+LGI+PIITS M MQ++AGA++I+V+ +KEDRALF GAQKLFGIL+T+ EAIA+V+SGMYG V ++GAGNAILI+ QLF G+ ++ +D++L KG+G+GSGISLF+ T +C T+ WK+FS +++ T RG E EGA +A+FHLL TR NK++A+ + F+R LPNL NL AT + VIYFQ WR+ LPVKYQKYRGQEG +PIKL YTSNMP+IL ++ VSNLY ISQL +R+ ++IL+RLLG W+E + G+ +PVGG+AYYI+PP +L+ I DPFH+ FY FIL SCA+FSK W+EVSGS++ DVA+QLR+QQMVMKGHRD+AL++VL+RYIP AAAFGGMC+GAL++ ADL GA+GSGTGI++AVTII+ + E F++EQ+E GA
Sbjct: 1 MRFLHLVRPVMCVLPEVASPDRKIPLREKLLWTSITLFIYLVCCQIPIYGIQSA-KSSDPFYWVRVVLASNRGTIMELGISPIITSGMVMQMLAGARLIEVDHNVKEDRALFQGAQKLFGILITIGEAIAYVLSGMYGDVGSIGAGNAILIITQLFCAGLIVLTLDEMLAKGYGLGSGISLFIATGICETIVWKSFSPTTINTGRGTEFEGAIIALFHLLITRNNKVQALTEAFYRQNLPNLTNLLATILIFVVVIYFQGWRVNLPVKYQKYRGQEGNYPIKLFYTSNMPIILLSSLVSNLYFISQLLYNRAPTNILVRLLGMWQETEGSGGQKIPVGGVAYYISPPRSLAEIIYDPFHATFYFVFILTSCALFSKTWIEVSGSSARDVAKQLRDQQMVMKGHRDSALINVLNRYIPTAAAFGGMCIGALSILADLSGAIGSGTGILLAVTIIFGFYESFVKEQREGAGA 469
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: B5YLQ8_THAPS (Protein translocase complex subunit n=5 Tax=Bacillariophyta TaxID=2836 RepID=B5YLQ8_THAPS) HSP 1 Score: 586 bits (1510), Expect = 1.460e-204 Identity = 284/475 (59.79%), Postives = 378/475 (79.58%), Query Frame = 3
Query: 114 MRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQEQKELMGAAAF*F 1538
MRFLH++RP+MCVLPEV PDRK+ FR+++ WT L +F+ +P+YG+ S SS P MR++LAS GT+M+LGI+PI+TS + MQL+AG+++I+VN +KEDRALF GAQKLFGIL+T+ EAIA+VVSGMYG + ++GAGNA+LI+ QLF G+ ++ +D++LQKG+G+GSGISLF+ TN+C + WK FS +++ T RG E EGA +A+FHLL TR +K+RAIK+ R LPNL NLAAT V VIYFQ WR+ LPVKYQKYRGQEG +PIKL YTSNMP+ILQ A VSNLY +SQL +R+ ++IL+R+LG+W+++ E G+++PVGGIAYYI+PP + + I DPFH++FYL FIL +CA+FSK W+EVSG+++ DVA+QLR+ QMVMKGHRD+AL+HVL+RYIP AAAFGGMC+GAL V AD GA+G+GTGI+++VTIIY + E F++EQ E AF F
Sbjct: 1 MRFLHLIRPMMCVLPEVQNPDRKIPFREKVLWTTITLFIFLVCCQIPIYGVQSA-KSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNYNVKEDRALFAGAQKLFGILITVGEAIAYVVSGMYGDLGSIGAGNALLIIAQLFCSGLIVLTLDELLQKGYGLGSGISLFIATNICENIVWKAFSPTTINTGRGTEFEGAIIALFHLLITRNDKVRAIKEALNRQNLPNLTNLAATMFVFVVVIYFQGWRVVLPVKYQKYRGQEGTYPIKLFYTSNMPIILQTALVSNLYFVSQLLYNRAPTNILVRILGKWQDV-EGGGQTIPVGGIAYYISPPTSFAEIIYDPFHAVFYLVFILTACALFSKTWIEVSGASARDVAKQLRDNQMVMKGHRDSALIHVLNRYIPTAAAFGGMCIGALTVIADFMGAIGTGTGILLSVTIIYQFYEAFMKEQAEDEMGGAFGF 473
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: A0A4D9D8Z0_9STRA (Plug_translocon domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8Z0_9STRA) HSP 1 Score: 585 bits (1507), Expect = 4.020e-204 Identity = 279/464 (60.13%), Postives = 378/464 (81.47%), Query Frame = 3
Query: 114 MRFLHMMRPIMCVLPEVSAP-DRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQE 1502
+RFLH++RP++C++PEV+AP DRK+ FR+++ WT+ L +F+ +P+YG+ S SS P MR++LAS GT+M+LGI+PI+TS + MQL+AG+++I+VNQ +KEDRALF GAQKLFGIL+T+ EA+A+V SGMYG +++LG GNAILI+ QLF+ G+ +I +D++LQKG+G+GSGISLF+ TN+C + WK FS +++ T RG E EGA +A+FHLL TR +K+RA+K+ F+R LPN+ NL AT V VIYFQ WR++LPVK Q+YRGQ+G +PIKL YTSNMP+ILQ A VSNLY +SQL + R S +IL+RLLG+W+E++ G+SVPVGGIAYYI+PP +++ I +DPFH++FYL FIL SCA+FSK W+EVSGS++ DVA+QLR+ +MVMKGHRD+ALVH L+RYIP AAAFGGMC+GAL V AD GA+GSGTGI++AVTIIY Y E+F+ +
Sbjct: 2 VRFLHLIRPVLCIVPEVAAPVDRKIPFREKVLWTVVTLFIFLVCCQIPIYGVQSA-KSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNQSLKEDRALFSGAQKLFGILITIGEAVAYVFSGMYGDLNSLGWGNAILIIAQLFIAGMIVITLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINTGRGTEFEGAIIALFHLLITRSDKMRALKEAFYRQNLPNVTNLLATVLVFIIVIYFQGWRVDLPVKSQRYRGQQGTYPIKLFYTSNMPIILQTALVSNLYFLSQLLHKRFSGNILVRLLGRWQEVEGQQGQSVPVGGIAYYISPPHSMTEILSDPFHAVFYLAFILSSCALFSKTWIEVSGSSAKDVAKQLRDSKMVMKGHRDSALVHELNRYIPVAAAFGGMCIGALTVVADFLGAIGSGTGILLAVTIIYQYYEMFVSQ 464
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Match: A0A024GJP5_9STRA (Uncharacterized protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GJP5_9STRA) HSP 1 Score: 583 bits (1504), Expect = 2.100e-201 Identity = 283/467 (60.60%), Postives = 375/467 (80.30%), Query Frame = 3
Query: 114 MRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGIPSGLTSSMPSDIMRIVLASGHGTIMDLGITPIITSSMAMQLMAGAQMIDVNQGMKEDRALFGGAQKLFGILLTLAEAIAFVVSGMYGPVSALGAGNAILIVCQLFLMGVALILMDQVLQKGWGIGSGISLFMCTNVCSTVWWKTFSWSSVTTARGPEIEGAFLAIFHLLFTRRNKLRAIKDVFFRTGLPNLVNLAATAAVAGAVIYFQKWRIELPVKYQKYRGQEGRFPIKLLYTSNMPLILQAAFVSNLYMISQLANDRSSSSILIRLLGQWEEIDEYSGKSVPVGGIAYYITPPATLSNIFTDPFHSIFYLTFILMSCAIFSKAWMEVSGSASLDVARQLREQQMVMKGHRDTALVHVLDRYIPPAAAFGGMCVGALAVAADLFGAVGSGTGIIMAVTIIYDYTEIFLQEQKEL 1514
MRFLH++RP+MCVLPEV+ PDRK+ FR+++ WTL L +F+ +PLYGI + SS P MR++LAS GT+M+LGI+PI+TS + MQLMAG++MI+V+Q +KEDRALF GAQKLFGIL+TL EA+A+VVSGMYG VS +GA NAILI+ QL G+ +I++D++LQKG+G+GSGISLF+ TN+C T+ WK FS +++ T RG E EGA +A+FHLL TR +KLRA+K+ F+R LPN+ NL AT V VIYFQ +R++LPVKYQK+RGQ+G FPIKL YTSNMP+ILQ A VSNLY ISQ+ + S + L+RLLG W+++D G+++PVGG AYY++ P+ L+ I DP + Y+ FIL SCA+FSK W+E+SGS++ DVA+QLR+QQMVMKGHRD+++VHVL+RYIP AAAFGGMC+GAL++ ADL GA+GSGTGI++AVTIIY Y+E F +EQ E+
Sbjct: 149 MRFLHLIRPVMCVLPEVAQPDRKIPFREKVLWTLITLFIFLVCCQIPLYGIQTS-KSSDPLYWMRVILASNRGTLMELGISPIVTSGLVMQLMAGSKMIEVDQSLKEDRALFSGAQKLFGILITLGEAVAYVVSGMYGNVSDIGAFNAILIILQLLFAGILVIILDEMLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLLITRSDKLRALKEAFYRQNLPNVTNLLATMLVFVVVIYFQGFRVDLPVKYQKFRGQQGTFPIKLFYTSNMPIILQTALVSNLYFISQMLYRKFSGNFLVRLLGVWQDVDGAPGQTIPVGGAAYYMSAPSNLAQILYDPLRFVLYVIFILGSCALFSKTWIEISGSSARDVAKQLRDQQMVMKGHRDSSIVHVLNRYIPTAAAFGGMCIGALSMVADLLGAIGSGTGILLAVTIIYQYSETFAKEQAEI 614 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.66.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig76.66.4 >prot_P-littoralis_Contig76.66.4 ID=prot_P-littoralis_Contig76.66.4|Name=mRNA_P-littoralis_Contig76.66.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=474bp MRFLHMMRPIMCVLPEVSAPDRKVDFRKRMGWTLGMLVLFVWASNVPLYGback to top mRNA from alignment at P-littoralis_Contig76:153281..166761- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig76.66.4 ID=mRNA_P-littoralis_Contig76.66.4|Name=mRNA_P-littoralis_Contig76.66.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=13481bp|location=Sequence derived from alignment at P-littoralis_Contig76:153281..166761- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig76:153281..166761- >mRNA_P-littoralis_Contig76.66.4 ID=mRNA_P-littoralis_Contig76.66.4|Name=mRNA_P-littoralis_Contig76.66.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1422bp|location=Sequence derived from alignment at P-littoralis_Contig76:153281..166761- (Pylaiella littoralis U1_48)back to top |