mRNA_P-littoralis_Contig76.189.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig76.189.1
Unique NamemRNA_P-littoralis_Contig76.189.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: D7FQA3_ECTSI (Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA3_ECTSI)

HSP 1 Score: 541 bits (1395), Expect = 5.960e-186
Identity = 286/356 (80.34%), Postives = 319/356 (89.61%), Query Frame = 2
Query:  581 METTGPSRLERARKFCLKNILPLGFLFVLIIALVWPAPGEAVAKPTVEDFRVIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVQLVIKAGEDASIDPVSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVIGFLGDLGEEGLMTIPCIVAHMSQLFIDAYIASRWAND----AEPEGAGTGAAKMNG 1636
            M T   SR +R +KFC+KN+LPLGF  VL+IAL WPAPG+AVAKP V D+R++QTINV++IF+ISGLTLKTDDIKEAL KEGRWGY+YG+VAILGITG VGFV AEIPFDV EFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPF+V+ V+ AGEDASIDPV LL+KLI++VLVPLVVGKV+REA PGAKA VKR KVRLSLTSSAMLIMVVWQTLSRAQ +LTSVAFTQIL+VIASGIGLH+VYLSINY +C+Y+L+LKRREFKAVVLM+SQKTLPVSV VIGFLG++G+EGLMTIPCIV HMSQLF+DAYIASRWAND     E E  G   AK NG
Sbjct:    1 MTTLVESRGQRVQKFCIKNVLPLGFFVVLVIALAWPAPGKAVAKPKVGDYRLVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGEDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKARVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGNVGQEGLMTIPCIVGHMSQLFMDAYIASRWANDDVAAVEDEAEG---AKTNG 353          
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: A0A6H5KQQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ7_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 6.720e-132
Identity = 214/296 (72.30%), Postives = 240/296 (81.08%), Query Frame = 2
Query:  581 METTGPSRLERARKFCLKNILPLGFLFVLIIALVWPAPGEAVAKPTVEDFRVIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMN-----------------------------------AGGNDALALLLTVTTNLLGVVTVPFFVQLVIKAGEDASIDPVSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVV 1363
            M T   SR +R +KFC+KN+LPLGF   L+IAL WPAPG+AVAKP V+D+R++QTINV++IF+ISGLTLKTDDIKEAL KEGRWGY+YG+VAILGITG VGFV AEIPFDV EFSYGLSVFCVVPTTLSSGVTLVMN                                   AGGNDALALLLTVTTNLLGVVTVPF+V+ V+ AG+DASIDPV LL+KLI++VLVPLVVGKV+REA PGAKAWVKR KVRLSLTSSAMLIMVVWQTLSRAQ +LTSVAFTQIL+VIASGIGLH+V
Sbjct:    1 MTTLVESRGQRVQKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNHHLLRSVEWFSLHGVSRCFVAFFTSCAPPFTLSPQAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLV 296          
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: A0A836CLX8_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX8_9STRA)

HSP 1 Score: 315 bits (808), Expect = 1.680e-97
Identity = 184/352 (52.27%), Postives = 236/352 (67.05%), Query Frame = 2
Query:  647 LGFLFVLIIALVWPAPGEAVAKPTVEDFR-VIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVQLVIKAGED----ASIDPVSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVIGFLGDLGEEGLMTIPCIVAHMSQLFIDAYIASRWANDAEPEGAGTGAAKMNG-----GTAAV*MDG*IS 1672
            +G    +II L WP  G+ V  P   ++     T  V+ IF+ISGLTLKTDDI+ A+ K+GR G +YGI+AILGIT  +GF+   +P    EF+YGL+VFC VPTTL+SGV++V  AGGN ALALLLTV TNL  VVT PF++  + K+       A+IDPVSLL KLIVTVLVPLV GK++R+  PG K +V R KV+L + ++ ML ++VW T+S A  DL S  F  I  VIA GI +HV+YLS+N+ M ++ L+L   EFKAV +MASQKTLP+SV +I +L  LG  G MT+PCIV HMSQLFIDA + S W   A    A T  + ++G     G AAV  DG IS
Sbjct:    1 MGLATAVIIGLSWPWLGQKVGAPDAGEYGGAASTACVIGIFIISGLTLKTDDIRMAISKQGRAGTIYGIIAILGITPILGFLTIRLPLAQPEFAYGLTVFCAVPTTLASGVSMVTQAGGNGALALLLTVVTNLTAVVTTPFWLSAMFKSKSQGTNGATIDPVSLLQKLIVTVLVPLVFGKLLRDLVPGCKGFVTRQKVKLGVCNNIMLTLIVWLTISDAAEDLLSTPFADIAVVIACGIAVHVIYLSLNWPMGKFALKLPLPEFKAVTIMASQKTLPLSVTIISYLTALGSTGFMTLPCIVGHMSQLFIDAGLQSMWLAQAAKREAATRDSSVHGDNSPAGAAAV-ADGTIS 351          
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: A0A836CJ89_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ89_9STRA)

HSP 1 Score: 294 bits (752), Expect = 1.470e-89
Identity = 157/328 (47.87%), Postives = 228/328 (69.51%), Query Frame = 2
Query:  665 LIIALVWPAPGEAVAKPTVEDFRVIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVQLVIKAGEDASIDPVSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVIGFLGDLGEEGLMTIPCIVAHMSQLFIDAYIASRWANDAEPEGAGTGAAKMNGGTAA 1648
            L+I L WP PG  V+   V D+RV+QT+NV+ +FLISGL LK+ DI+ A+ +EG  G++ G+V ILG+T   GFV   +PF  KEF+YGL++FC VPTT++ GV +   AGGN ALAL+LTV +NLLGV+  PF++Q    +G+D +ID + LL+ L++TVL PL+VG+ +R   P  +  V R+K  L L SS  L ++VWQT+SR+  D+ +V+   I+A+IA+ + +HV YL +++   RY+LRL   E KAVV+M+S+KTLPV++ VI FL ++G EGL++IP IV+   QLF+D++IA++W       G  T AA  +  TAA
Sbjct:    3 LLIGLAWPQPGTEVSSWMVADYRVVQTLNVMTVFLISGLNLKSADIRAAVSREGSLGFIVGMVLILGVTPLSGFVAVRLPFAEKEFAYGLAIFCGVPTTIAVGVAMTTAAGGNAALALMLTVFSNLLGVLITPFWLQ-AFFSGQDVAIDALDLLVNLLITVLAPLLVGQAIRFLVPPVRTLVTRHKTALKLISSTSLALIVWQTVSRSAEDILAVSGGSIVAIIAASLIMHVAYLVVSFVTARYLLRLGDAELKAVVIMSSEKTLPVAIAVIAFLTNVGSEGLLSIPPIVSQQVQLFMDSFIATKW-------GEKTSAAARHAATAA 322          
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: C1E9H5_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC)

HSP 1 Score: 282 bits (721), Expect = 1.840e-84
Identity = 160/354 (45.20%), Postives = 230/354 (64.97%), Query Frame = 2
Query:  608 ERARKFCLKNILPLGFLFVLIIALVWPAPGEAVAKPTVEDFRVIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVQLVIKA---GEDASIDP------VSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVIGFLGDL--GEEGLMTIPCIVAHMSQLFIDAYIASRWANDAEPEGAGTGAAKMNG 1636
            +R + + +KN L LGF+FV+++AL WP PG  +  P   DF + QT  +V+IF ISGLTLKT DIK+ALG+       YGI+ IL +T  +GFVV +IPF+  EF YGL++F  VPTTL+SGVTLV +A GN  +AL+LTVTTN+LGV TVPF +  V+ +   G+    D         LL+KLI+++++P+ VGK  RE    A ++  + K  L LT+++ LI +VW ++S ++  L   +   I  ++ +G+ LH+ +L++N+ M   V+++   E +AV+LM SQKTLPV+V +I +L +   G +GL+ IPCIV H+SQLFIDAYIAS WA     E     AAK  G
Sbjct:   17 KRWKPWLIKNYLVLGFVFVIVLALSWPLPGRELGSPKSGDFPIAQTCCIVVIFFISGLTLKTADIKKALGQPAA--LAYGIITILLVTPMMGFVVVQIPFEPVEFRYGLALFACVPTTLTSGVTLVTSALGNGVMALMLTVTTNVLGVFTVPFILNAVLLSAPGGDSGGTDTDMAETAAKLLLKLIISIIIPMGVGKATREFVEQAPSFTTKYKTELGLTNNSCLIAIVWMSISNSRGKLVRESALNIFVIVVAGVLLHLFFLTMNWVMTTAVMKIPEAERRAVLLMTSQKTLPVAVTIIAYLDEARWGAQGLIAIPCIVGHVSQLFIDAYIASIWAGQDPKEIDERNAAKRAG 368          
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: A0A7S0SJ85_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO)

HSP 1 Score: 281 bits (720), Expect = 2.430e-84
Identity = 163/354 (46.05%), Postives = 229/354 (64.69%), Query Frame = 2
Query:  611 RARKFCLKNILPLGFLFVLIIALVWPAPGEAVAKPTVEDFRVIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVQLVIKAGE----------DASIDPVSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVIGFLGDL--GEEGLMTIPCIVAHMSQLFIDAYIASRWAN-----DAEPEGAGTGA 1621
            R + + L+N L LGF  V+ + L WP PG  +  P   DF + QT  +V IF ISGLTLKT DIK AL +    G +YGI+ ILG+T  +GF+V +IPF+  +F YGL++FC VPTTL+SGVTLV +A GN ALAL+LTVTTN+LGV TVPF +  V+ +              +   + LLIKL++++++P+ +GK VRE    A+      KV L L +++ LI +VW ++S+++  L       I  ++ +GI LH+++L++N+TM   VLRL+ +E +AV+LM S KTLPV+V VI +L +   G  GL+ IPCIV H+SQLFIDA IA+RWA      DA  E  G+GA
Sbjct:    4 RWKPWLLRNFLVLGFAAVITLGLSWPLPGAELGDPMAGDFPIAQTCCIVTIFFISGLTLKTADIKNALNEHV--GLVYGIIMILGVTPMLGFLVVQIPFEPIQFRYGLALFCCVPTTLTSGVTLVTSALGNSALALMLTVTTNVLGVFTVPFILNAVLDSAPGNGXXXXXXXSVAKTAMQLLIKLVISIIIPMSIGKSVREFFAVAQKATATYKVELGLVNNSCLIAIVWMSVSKSREKLVGQTPLNIFIIVVAGITLHIIFLAVNWTMTTPVLRLREKERRAVLLMTSAKTLPVAVTVISYLDEAVWGGHGLIAIPCIVGHVSQLFIDAAIAARWAANPPPADAAAEAGGSGA 355          
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: A0A5B8MCM7_9CHLO (Putative sodium/metabolite cotransporter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MCM7_9CHLO)

HSP 1 Score: 276 bits (707), Expect = 6.950e-82
Identity = 158/343 (46.06%), Postives = 225/343 (65.60%), Query Frame = 2
Query:  623 FCLKNILPLGFLFVLIIALVWPAPGEAVAKPTVE----DFRVIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVQLVIKAGEDASIDPVSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVIGFLGDL--GEEGLMTIPCIVAHMSQLFIDAYIASRWANDAEPEGAGTGAAKMN 1633
            F  KN LPLG +    +A+V+P PG  V K  VE    D++++ +  + +IFL SG TLKTDDI +A       GY  G VAIL IT T+GF + ++PF  K F+ GLSVFC VPTTLSSGV LV   GGN ALALLLTV TNLLG++TVPF V+LV+ + ED   D +SLLIKL +T+L PL++GK++R +      + K  K + S+ +S  L+++VWQTLS+AQ ++   +   +L ++A GIG+H+ +L  N+     +LR+++ E++A++L  SQKTLP++V VI FL +   G  GL+ +PC+V+H+ Q+ ID+ I SRW    E  G G G  K +
Sbjct:    8 FLKKNFLPLGLVTAATVAMVYPPPGREVQKHMVEVNGNDYKLVSSCLIFLIFLSSGFTLKTDDIMKAAKNYVAVGY--GFVAILLITPTLGFGIMKLPFKPKAFASGLSVFCAVPTTLSSGVALVTQGGGNAALALLLTVGTNLLGILTVPFAVKLVLDSEEDFDFDALSLLIKLAITILAPLILGKLLRHSHQALGKFAKEKKQKFSMANSLCLVLIVWQTLSKAQPEVIDQSAGDLLLLVAGGIGIHIAFLVFNFISVS-LLRVEQPEYRALLLCTSQKTLPIAVTVINFLPEPYEGYHGLLVVPCVVSHLVQILIDSVIVSRWMGGVE-SGMGKGGRKRS 346          
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: A4RT86_OSTLU (BASS family transporter: sodium ion/bile acid (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RT86_OSTLU)

HSP 1 Score: 266 bits (680), Expect = 2.000e-79
Identity = 156/328 (47.56%), Postives = 216/328 (65.85%), Query Frame = 2
Query:  623 FCLKNILPLGFLFVLIIALVWPAPGEAVAKPTVEDFRVIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVQLVIKAG------------EDASIDPVSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVIGFLGD--LGEEGLMTIPCIVAHMSQLFIDA 1564
            F L N L  GF   L+  L  PA G+A+AK +V  + VIQT+ VVIIF+ISG TLKT++I +AL K GR    YG VAILG+T  +GF++  +P+   EF YGL++FC VPTTL+SGVTLV NA GN ALAL+LTV+TNL+GV TVPF+   V+ +G             D S   V LL+KL+ T+L+P+V+GKV RE  P   A+    K  L+LT+++ LI+VVW ++S++  +L       I AV+ + + +HVV+L+INY    + L L   E  A V+M+SQKTLPV++ +I +L +   G  GL+ IPCIV H++QLF+DA
Sbjct:    1 FLLDNFLVCGFCLALLFGLSVPAAGKALAKVSVSGWSVIQTVCVVIIFVISGATLKTEEITQAL-KAGRGALGYGWVAILGLTPLLGFILVRVPYKPIEFRYGLALFCCVPTTLTSGVTLVRNAKGNVALALMLTVSTNLIGVFTVPFYFNAVVASGPREMASAVNGAANDMSTQAVKLLVKLLFTILLPIVLGKVAREMIPAVAAFANARKAELTLTNNSCLIIVVWMSISKSAKELIDTNVGTIFAVLFAAVLVHVVFLAINYA-ATHALGLSGPERVACVMMSSQKTLPVAMTIISYLPEDVFGSGGLIAIPCIVCHITQLFMDA 326          
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: A0A7S0Z714_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z714_9CHLO)

HSP 1 Score: 265 bits (677), Expect = 2.340e-78
Identity = 161/354 (45.48%), Postives = 223/354 (62.99%), Query Frame = 2
Query:  560 RRHTKAVMETTGPSRLERARKFCLKNILPLGFLFVLIIALVWPAPGEAVAKPTVEDFRVIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVQLVIKAGE----------DASIDPVSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVIGFLGD--LGEEGLMTIPCIVAHMSQLFIDAYIASRWA 1585
            RRH    M  T P    RA+KF + N L LGF   L I L  PA G  +A  +   + ++QTI V+IIF+ISG TLKT++I +AL + GR    YG+V+ILG+T  +GF+   IP+   +F YGL++FC VPTTL+SGVTLV NA GN ALAL+LTV+TNLLGV TVPF+   + ++G           D     V LL+KL+ T+LVP+  GK+ RE  P       ++K  L+LT+++ LI+VVW ++S++   L S     I  VI +GI  HVV+L+INY      L +   E  A V+M+SQKTLPV++ VI +L +   G  GL+ IPCI+ H++QLF+DA +A+R A
Sbjct:    8 RRHI-ITMPDTQPLAAARAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSCLIIVVWMSISKSAKQLLSTDAGSIFLVIFAGIATHVVFLAINYG-ATGALGISGPERVASVMMSSQKTLPVAMTVISYLDEDVFGTSGLIAIPCIICHLTQLFMDAPLATRLA 358          
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Match: A0A383W7R8_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W7R8_TETOB)

HSP 1 Score: 266 bits (679), Expect = 3.580e-78
Identity = 158/327 (48.32%), Postives = 215/327 (65.75%), Query Frame = 2
Query:  614 ARKFCLKNILPLGFLFVLIIALVWPAPGEAVAKPTVEDFRVIQTINVVIIFLISGLTLKTDDIKEALGKEGRW-GYLYGIVAILGITGTVGFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVQLVIKAGE--DASIDPVSLLIKLIVTVLVPLVVGKVVREATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILAVIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVIGFLG-DLGEEGLMTIPCIVAHMSQLFIDAYIASRW 1582
            A++F L N + L F     +A+ WP PG+AVA   V D RV+Q +N  ++FLISGLTLK+DD +  L     W G LYG++AIL IT  +GF +  IPF   EF+ GL++FCVVPTTL  GV L   + GN ALALLLTV TNLLG+VTVP+ ++LV+  G     S++P SL++KLI+TVLVP V+GK+ R+     + +V R K  LSL S+  L  +VWQTLS A+  L    F  +L V+ +   LHVV L  N  + RY+LRL  RE  AVV+M+SQK+ PV+V VI +L   L ++GLM IPCI+  ++Q+FI + +A +W
Sbjct:   79 AKQFALDNFMLLSFSLAAALAMAWPVPGKAVASWAVGDVRVVQALNNFLVFLISGLTLKSDDFRALLK---HWVGVLYGLIAILAITPCLGFAMLAIPFQPPEFATGLALFCVVPTTLGVGVALTAASKGNQALALLLTVATNLLGIVTVPYELRLVLSTGSVSTVSVEPGSLVVKLILTVLVPSVIGKLARDLFKPVQRFVTRFKTPLSLFSTLNLACIVWQTLSGARQTLLQQPFVAVLLVVVASSLLHVVMLLFNGLVVRYLLRLPFREAVAVVIMSSQKSAPVAVTVISYLTPSLTQQGLMAIPCILGQLAQIFIGSALA-KW 401          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA3_ECTSI5.960e-18680.34Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ecto... [more]
A0A6H5KQQ7_9PHAE6.720e-13272.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CLX8_9STRA1.680e-9752.27Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
A0A836CJ89_9STRA1.470e-8947.87Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
C1E9H5_MICCC1.840e-8445.20Bile Acid:Na+ symporter family n=2 Tax=Micromonas ... [more]
A0A7S0SJ85_9CHLO2.430e-8446.05Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A5B8MCM7_9CHLO6.950e-8246.06Putative sodium/metabolite cotransporter n=1 Tax=C... [more]
A4RT86_OSTLU2.000e-7947.56BASS family transporter: sodium ion/bile acid (Fra... [more]
A0A7S0Z714_9CHLO2.340e-7845.48Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A383W7R8_TETOB3.580e-7848.32Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:562133..567539 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQA3
PFAMsSBF_like
Model size2196
Max annot lvl2759|Eukaryota
KEGG koko:K14347
KEGG TC2.A.93.1
Hectar predicted targeting categorysignal peptide
Exons4
Evalue1.01e-192
EggNOG OGsCOG0385@1|root,KOG4821@2759|Eukaryota
Ec32 ortholog descriptionPutative sodium bile acid cotransporter
Ec32 orthologEc-01_006880.1
Descriptionsymporter activity
Cds size1074
COG categoryJ
BRITEko00000,ko02000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.189.1prot_P-littoralis_Contig76.189.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig76 562675..566959 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791571.4588158-UTR-P-littoralis_Contig76:562132..5626741680791571.4588158-UTR-P-littoralis_Contig76:562132..562674Pylaiella littoralis U1_48UTRP-littoralis_Contig76 562133..562674 -
1680791571.538332-UTR-P-littoralis_Contig76:566959..5675391680791571.538332-UTR-P-littoralis_Contig76:566959..567539Pylaiella littoralis U1_48UTRP-littoralis_Contig76 566960..567539 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791571.4814591-CDS-P-littoralis_Contig76:562674..5629661680791571.4814591-CDS-P-littoralis_Contig76:562674..562966Pylaiella littoralis U1_48CDSP-littoralis_Contig76 562675..562966 -
1680791571.4930224-CDS-P-littoralis_Contig76:563219..5634461680791571.4930224-CDS-P-littoralis_Contig76:563219..563446Pylaiella littoralis U1_48CDSP-littoralis_Contig76 563220..563446 -
1680791571.5103707-CDS-P-littoralis_Contig76:563926..5640701680791571.5103707-CDS-P-littoralis_Contig76:563926..564070Pylaiella littoralis U1_48CDSP-littoralis_Contig76 563927..564070 -
1680791571.5251088-CDS-P-littoralis_Contig76:566548..5669591680791571.5251088-CDS-P-littoralis_Contig76:566548..566959Pylaiella littoralis U1_48CDSP-littoralis_Contig76 566549..566959 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig76.189.1

>prot_P-littoralis_Contig76.189.1 ID=prot_P-littoralis_Contig76.189.1|Name=mRNA_P-littoralis_Contig76.189.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=358bp
METTGPSRLERARKFCLKNILPLGFLFVLIIALVWPAPGEAVAKPTVEDF
RVIQTINVVIIFLISGLTLKTDDIKEALGKEGRWGYLYGIVAILGITGTV
GFVVAEIPFDVKEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTV
TTNLLGVVTVPFFVQLVIKAGEDASIDPVSLLIKLIVTVLVPLVVGKVVR
EATPGAKAWVKRNKVRLSLTSSAMLIMVVWQTLSRAQSDLTSVAFTQILA
VIASGIGLHVVYLSINYTMCRYVLRLKRREFKAVVLMASQKTLPVSVVVI
GFLGDLGEEGLMTIPCIVAHMSQLFIDAYIASRWANDAEPEGAGTGAAKM
NGGTAAV*
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mRNA from alignment at P-littoralis_Contig76:562133..567539-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig76.189.1 ID=mRNA_P-littoralis_Contig76.189.1|Name=mRNA_P-littoralis_Contig76.189.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5407bp|location=Sequence derived from alignment at P-littoralis_Contig76:562133..567539- (Pylaiella littoralis U1_48)
AGGAGGACGGGAGGCCGCGCGCGGTGATGGTTTCCATCGGTTCCCATGGC GGTGCTGGTTCAAAAAAAAGCGAACCTCGAAATATGAGATCATCACCCGC TGCATCCTGCTATCATGTTCTGTAGCGACCCACGCACACACAGCTGGAGC AGGGAGGGGGGGCAGTCATAGGCAGAGGCAGAGGCGCCACATATTCCAGG GAATACCAAGCATCTCCTATCGGTTCACCTGCTGCGCGCGACGCAGATAG TACAAAGTACAGAGGGCACCCGCAGACTGTTGACAGAGGCGGTCGAAACG TTGAAACGTACGTCTCGTCACCTTCTACTGCTGTGGGCAGCGTTGGCGTT GGGAGTTGGGAGTGCCGGGCGGCTGCTGACAGCATTGCTATAGGTCCTGG CGGGGAGGTATACTGTGCTGTGGGGGTCCACCAGCGTGATCTTATTATCC GGGGAGGTATACTGTGCTGTCTGGCTTACACTGATATTAGCTGGTGGAGG AGGCAGCGTACCACTCAGAGAGTCTCAAAGCACAGCACAACAGCTGTAGG CAGTACGAACGACGGCACACAAAGGCAGTCATGGAAACAACGGGGCCGTC ACGATTAGAGCGGGCGCGGAAGTTCTGTCTGAAGAACATCCTTCCCCTGG GCTTCTTGTTCGTCCTGATAATCGCCCTTGTGTGGCCAGCACCAGGGGAA GCCGTGGCGAAGCCCACGGTTGAGGATTTCCGCGTCATCCAGACCATCAA CGTCGTCATCATCTTCCTCATCTCGGGCCTGACACTTAAGACCGACGACA TCAAGGAGGCCCTGGGCAAGGAAGGGAGATGGGGCTACCTTTACGGGATC GTGGCTATCTTGGGAATCACGGGCACCGTCGGTTTCGTGGTCGCGGAGAT CCCGTTCGACGTGAAGGAATTCTCGTATGGCCTGTCCGTGTTCTGCGTCG TGCCCACCACGCTCTCTTCGGGGGTGACCCTTGTCATGAATGTAAGCACA CAAGATTAGTCCCAAAATGGACACATTACTTTTATTGTATACGAAGTATA CTCCGTACAACAGTACATATTTCGAAGCAAAACAGGAAGATTTACCAGGT AACATGTACTTTGAATCATACAAGTTCATCTTCTGTAGAGCTTCAGGTCT TCCACTGAGAAAGCACCTGTCCGTCTGTGGACCCTTCTCCCAAGAAATTA CACCCACACACTTTTCTCCTTTTCGAGAACTACTGCCGTGCCGTTCTCGA CAACGGGGACGATGCTTGACGCGAAATCTCAGAAGTTCATGTTTAAACGC GTGATCGACGTGCTCACCGAATCTTGCACAATTCTTCGGCGCCATTCAAA GGCATCGGGCGTTATGCCCCACATCTATGGATGCTCCTCTCTCCCCTAGC TTCTCTGTTATTTTTTTTTGCTGTCATTTGTTTTCGTCCAACATCATTAT CCGTTGACGTTTATCTGTACAGTATAGGAAATTCGGATTTTCCACCTGAT CGCAGCATAGAACCGTATCGGCCATATACACAGCTGCTGTGGCTTATCTC CCGACAACGGGGATGCCGCTGGACGGAAACTCTCGGGAGTTCATGTTATA CACACGCGATTGACGTGCCTACCAAATATCACTCAAGCCTATCGTGTGGC GCCGTCCAACACTAACACATTTTGTCGTTGTGCGCGGCAGTAGTTGCCCA TCCTCACCGCTGGCTCGTGGCCTGATCCTTCGAGCCATGCAGGCCATTTT GGAGGTTCCGTGCAAAGAAATACAGCTGACAATTTTGCCGTGGAACGCTA CACCGTTCGCGCGTAACAACACGCAGCACAGCAGTAGCAGTAGCAACAGA CAAGAGAGGGCCACTCCGTTCCTCTGCTAATCTTACCTGCCACGTGTACT GCTGCGAGTTGGCTGAAAAGACGCTGTTGATCCTACAGCGTGCGTTGGCC TTCAACATGCGATACTCCCCTGCCCTGCTGTTCCTGCCGTTTCATCACCT CCGGCTGCAGCGGGAGCTTCGCTCTTCTCCAACATCGCAAATCGTTTCCG ATTTCGAGTGACAGGTTTTCCCTGTTGTTATCCTGTTATCGAAGAGTGAT AGTTTTGTTATTTTCTACTCAGTCGGGTTGAACTATTAGGGGTGAGCCTC GAGAACGGAGGAGGCCAACAATCGAATAACTTTTAGACTCGTTCGTTCTC AGCGTCTCTTTTTATCATCTCGTAATCTTGCCTTTTGCTGGAAAACACAT GTCTTCTCTCTTTTTCTACATTCCCTTCCGAGACCTTGGAGATGGCGGTC TATATAAACTTTTCTCTGCACTCCGTGAATTTTTCCTCTTTGTCTCTTTT CGTTTCCTTTTCGTTTCCCTGCTTCCTCTTTATTTGGCGGCCTGTTTTTG TGTTTGTGTACGAGTACACTCTCTCAGTCTTTGTGTCCTCCCGGTGTCTT CTTTTATTTATATGTCGTATTTTGATCATGTATTTACTGGACCATGCGCC CTGTTTTGCCTTTGCCTTGGTCTGTCATGGACCTTGGCTCTGGTTCGGTA TACGAAGTACTTCGATGTATATGGTTAAGGTTTGTCTTTGTTTTTGTACT GTTTCCAATTTTTGTTTTTTCTTTCGAACCTGTCATTTTCTGTATTTTTT TCTGTATTTGTTTTGTACTTTGGCCACCACAGATGGTACCCCAACGGTAC CCTATCTGATTTGACTGTGGATGATCGTAGTCCATTTATTTTATTTTTTT CACTTTCCTCCTAGCACGACATGTGCCTGGTTTGTGACCGGGCTAGACTG CGGCGGTAGTGAGCTCATGTGAGAATCAACAACAACAACATGTGAGAATC AACAACAACAACAACAACAACAACAAAATAAGGAGCAAAAAAAAATATTG CAAATCTGCTTCCTTCTCTTTCGCCTTCTACGCGATGCTTCGTGCTCGCA CCTGGAAATTTGCTGCTACTTTCAGTACATGTGGTATCATTTTGCGCAAC CGTTGAAGACACATCAAATCCGCTGGTCATATAACAGTATAGTCTATTCT CCCTCCGTACTGTAGTCCATTTCATCTACCCCTCCCCCTAGGAAACAATT CTTCAAGCCCAGCCAGCGTGTCGGCGAAACAAGACGCCATACCATCGGTA TCGTACGGCGTCGAATCGGGTGAGACAACGAGACCATATGCGGTATTTAC CCACGAAGAGATTACGAAGTATGGCAGTAAGTGTCCGTGCCCTCTTTTTT TATTAACATGAAGGCACACACGTATTTTCCAACATGTATCAACATCTCCA CAGCAGGTAAGAGTGCCGTTGCCGAAAAGGGTCGCGCTGGAAAGATCCTT AAAGAAATTTGTACATGCTTGGCTTTTTGTTTTTGTTTTTGGCATTTCGT TCCAATGTTTTCAATGCGAACGTCCTGCGTCCCACGCTCGCCGCACTCTC TCTCCGTCGAATCTGACAGGCTGGGGGAAACGATGCGTTGGCGTTGCTAC TGACGGTAACAACCAATTTGCTCGGGGTGGTGACGGTTCCGTTTTTCGTC CAGCTTGTGATCAAAGCCGGGGAGGACGCGTCCATCGACCCCGTGAGCCT CCTCATCAAGCTGGTGAGAGAGGGATTCAGGGAGGTGTACCAAATGAAAG TCTCTTATTGCAGTTGGTTGTAGACCTAGCGATATACTCGGAGTATAACG AATCTGCTGGAGTTCAAGACAGCATGTGACTAACTTATTTTTCTCTCTTT CTCTTTTGTCGCGACGCGATGAGCAGTGAGATGAATTCAGGCCCATGTCA CAGCAATAGGGGGAGAGTTTTGCACCATGCGCACCGCTGGAGCCGACCCT TTCGTCGGTCGTGTTCCACGAAACAGCAGTACAGCAGTAGCCCCCACCCC TCTCCTGGGCTATCATCGTCCCTGTGGACCTATCATACATTTGTGTTGGG ACACCGTGGGAGGTCGCGCCGAGGGAGATGCCTGAAATAATGAAACAATA AACATCGCCTGGCGTGTACACCCTTACTTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTTACGTTTCATTGCCCGTTCTGGCGTGCACCAGATAGTGA CTGTGCTAGTTCCGCTGGTGGTGGGGAAGGTGGTACGAGAGGCCACCCCG GGGGCGAAGGCCTGGGTGAAGCGAAATAAAGTGCGGCTGAGCCTGACGAG CAGCGCCATGCTGATCATGGTGGTGTGGCAGACTCTGAGCAGGGCCCAGA GCGACCTGACCTCGGTGGCGTTCACGCAGATCTTGGCGGTCATCGCCTCG GGCATCGGTCTTCATGTCGTGTGAGTGAGCGGTTGGTGAAGAAGGGGGAG AGAGACGACAACGACGACGACGACGACGTCGGGGAGTTGCCTTTTTCGCT CTAGAATGGGGTGCAGATAACGCTGTATACTACTACTGCTGTACTGCTAT ACACGTTTGACGTTTTTTTTCCTTTCAAGATCATATGTCCCACAAAGTTC TTCGTACAAATTTTTAAATTTTCAATACCACGTATCCCTTTCTCGCTCCT TCCCCGCTGCCATCCCCAATCAGCTACCTGAGCATAAACTACACCATGTG CCGGTACGTTCTCCGGCTCAAACGCCGAGAGTTCAAGGCTGTGGTACTCA TGGCTTCGCAAAAAACGCTGCCGGTATCGGTGGTCGTCATCGGCTTCCTC GGCGACTTGGGAGAGGAGGGGCTGATGACGATACCGTGCATCGTCGCGCA CATGTCGCAGCTGTTCATCGACGCTTACATAGCTTCCAGGTGGGCGAACG ACGCGGAACCAGAAGGAGCGGGGACGGGAGCGGCAAAGATGAACGGAGGG ACCGCCGCGGTGTAAATGGATGGATAGATCTCTTTTCGGATGGGCAAACA CAGCGTGTTGAATTGGGTGGTGCTCAAGAGAAGGACCCTCTATCAAATCG CTGAAAACCCTAGATCCAACATAAACATCATACTAGTTCTCTTTCAGTTT GCTGGACTCTGTATGATACACGTATGTATTTTTAGACATTTGTTTTGTCC AATTCGATGTACCATTGAGGGGCCCCGTGCCGGGTCTCTGTAAAGTACCT TGTATAGTACACTCCAGCGGGTCTTGCCGGGGCGCGTTCCTCGTCGGCAT TTGCTTTGTTGTCGTGCTCAAACAAATTGCAGTGAACAAAGGGGCGGGAA CACAAGCGTTGCAGATTTCACGATTTCTCTGAGCGTGTACATACAGCACG TGGTCTAGGGGGGCCCGTTTGTTCTTCGGTTTTGCTCTTTTTTTTCTTTT TTTTTGTGAAACGCCTACAGTGTTGATTTATGTAGGGTGGTGGGTGCGCG CGTGGGGCACGGCGGGTTTGGGGGGAAAATATGTTGGGTTCTTCGGTTAG GAATGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig76:562133..567539-

>mRNA_P-littoralis_Contig76.189.1 ID=mRNA_P-littoralis_Contig76.189.1|Name=mRNA_P-littoralis_Contig76.189.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1074bp|location=Sequence derived from alignment at P-littoralis_Contig76:562133..567539- (Pylaiella littoralis U1_48)
ATGGAAACAACGGGGCCGTCACGATTAGAGCGGGCGCGGAAGTTCTGTCT
GAAGAACATCCTTCCCCTGGGCTTCTTGTTCGTCCTGATAATCGCCCTTG
TGTGGCCAGCACCAGGGGAAGCCGTGGCGAAGCCCACGGTTGAGGATTTC
CGCGTCATCCAGACCATCAACGTCGTCATCATCTTCCTCATCTCGGGCCT
GACACTTAAGACCGACGACATCAAGGAGGCCCTGGGCAAGGAAGGGAGAT
GGGGCTACCTTTACGGGATCGTGGCTATCTTGGGAATCACGGGCACCGTC
GGTTTCGTGGTCGCGGAGATCCCGTTCGACGTGAAGGAATTCTCGTATGG
CCTGTCCGTGTTCTGCGTCGTGCCCACCACGCTCTCTTCGGGGGTGACCC
TTGTCATGAATGCTGGGGGAAACGATGCGTTGGCGTTGCTACTGACGGTA
ACAACCAATTTGCTCGGGGTGGTGACGGTTCCGTTTTTCGTCCAGCTTGT
GATCAAAGCCGGGGAGGACGCGTCCATCGACCCCGTGAGCCTCCTCATCA
AGCTGATAGTGACTGTGCTAGTTCCGCTGGTGGTGGGGAAGGTGGTACGA
GAGGCCACCCCGGGGGCGAAGGCCTGGGTGAAGCGAAATAAAGTGCGGCT
GAGCCTGACGAGCAGCGCCATGCTGATCATGGTGGTGTGGCAGACTCTGA
GCAGGGCCCAGAGCGACCTGACCTCGGTGGCGTTCACGCAGATCTTGGCG
GTCATCGCCTCGGGCATCGGTCTTCATGTCGTCTACCTGAGCATAAACTA
CACCATGTGCCGGTACGTTCTCCGGCTCAAACGCCGAGAGTTCAAGGCTG
TGGTACTCATGGCTTCGCAAAAAACGCTGCCGGTATCGGTGGTCGTCATC
GGCTTCCTCGGCGACTTGGGAGAGGAGGGGCTGATGACGATACCGTGCAT
CGTCGCGCACATGTCGCAGCTGTTCATCGACGCTTACATAGCTTCCAGGT
GGGCGAACGACGCGGAACCAGAAGGAGCGGGGACGGGAGCGGCAAAGATG
AACGGAGGGACCGCCGCGGTGTAA
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