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Homology
BLAST of mRNA_P-littoralis_Contig76.184.2 vs. uniprot
Match: D7FQA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQA2_ECTSI) HSP 1 Score: 530 bits (1364), Expect = 6.170e-173 Identity = 383/790 (48.48%), Postives = 478/790 (60.51%), Query Frame = 1
Query: 28 THFEAFEYQDVADFADNVKNAFDELTGVSPLWFSVENDEGAGTRGRSFGGKRDGEGGCERFGDWVVGESLVDVFEDEPPAGSDGQEVLKVVNALLAAYDQNGAKQREGLEECVLAFKNAIEGDLDTRLDTLAERCTDRWIDEQKRTEAAQAGLTELEAQTVARLEGLRQVLKERESTVLVALKHEREANTRKVLASTLKDSLEEGRMLFDRQVEETELEGRLKQRRHLLNLSSRGV--QQEEIEAALLKAARDQVESLMQVVDKMQKQQTKLLDVLQADKENAATLRQHVSSRLRDSTKKETTSTTP-------------STKTGGVAALAAAVTSKHKREVAGGSDTDSSPDENDQLFEGDLVEACNRLENENLGFRQRLAKKELETLRKEHDDCDTELND-GSRLAAVLEAKRNLERQVAGLQRANEDRSKELERVRHG----------------TIPTTTEPKTQTKPAMKAEMNSEDSAKADELKADVVAETETLRQKVKTLRRKLVFKLACNVMRRRFKDAGMGPGNSPDTPSGPCAGDGCQIEASADRHGLPREVQVHAALLQQKNALQREIDRAAREDQELQRAIDRA-----------EGTASAAVDETAGGGGVKGQDNKRERGEGKEEEKEEAGGQSELEG--------VTRE--GLGGGVPGSSSLRTKSSAAVLAVNSRTVSDRQYVYPRCKKRLRTLVRLKIKAGARLAALRSLAKKNEEAAQAIAIDAVDGEALKAVLQNENRAREKAAAVLGLLCSRDMAKARTRWLKRALDRSM 2238
T FEAFEYQD+AD A+ VK AFD+LTG ++L VNAL+A YD+N AKQR+GLEEC++AF A+EGDLDTRLDT+ ++CT+R I+E+++TEAAQAGL ELE QTVARLE L +VLK+R+ TVLVALKHEREANTRK+LASTL D LEEGR LF++QVEETELEG+LKQRR LL+L+S+GV QQEEIEAA+LKA+RD+V++LMQVVDKMQ QQTKLL LQA+K+N + +RQHVS RL S E+ + TP ++K G AALA G D S D QL +L+ AC RLEN N+ RQRLAK EL+T++KEH + ELN SRL VLE K+ LE ++ GLQ ANE+RSKELER+R G +IPTTTE P + + N S D+ A + AET TL QKVKTLRR LVF LAC VMRRRFKDAG+GPGN P+ P GP D Q+E + DR GLP ++QVHAA L+QKNA+QREI++ R +QELQ AI+ + T E A GG ++ E G G+ E G TRE G+G G G L+ + + + +V R+RTL ++ A RL L+SLA KNEEAA+ ++DAVD EA++AVL+NE+ AREKA AVL LLCSR+MAKAR RWLK+AL+RSM
Sbjct: 70 TQFEAFEYQDLADVAETVKGAFDDLTG----------------------------------------------------------DILTKVNALVATYDENSAKQRQGLEECMVAFNKAVEGDLDTRLDTMTQQCTERHIEEKEKTEAAQAGLVELEEQTVARLEALGKVLKDRQETVLVALKHEREANTRKILASTLGDPLEEGRKLFNKQVEETELEGKLKQRRRLLDLNSQGVSVQQEEIEAAMLKASRDEVDNLMQVVDKMQNQQTKLLVTLQAEKKNISAMRQHVSKRLGASVDNESIAATPPREGGPSGGIKRHASKKGKTAALAVTAAFTMSNPGEGILDDGDSLDVISQLSGIELLHACERLENHNVTLRQRLAKLELQTMQKEHGGDEDELNKTDSRLPRVLETKKELEGKLEGLQMANEERSKELERIRGGGDVPTTKSAGPTTAMSSIPTTTETPG---PVKRPDANGNGS---DDFMATIEAETTTLTQKVKTLRRTLVFNLACKVMRRRFKDAGLGPGNDPNPPKGPIVVDDSQLEGAGDR-GLPPDMQVHAARLEQKNAVQREIEQTERREQELQHAIENTTSTNRETLTDGDSTGKRLAGEVASGG-----EDVMEGGLGRXXXXXXXXXXXEENGRRHTGKRPSTREDEGVGDGGEGQPKLKKSKVPSRMPTEAASVGTTA-ANMNASARIRTLQSMQATAQKRLDILQSLAAKNEEAAKENSLDAVDSEAVEAVLRNESIAREKALAVLDLLCSREMAKARARWLKQALERSM 788
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 2554 |
| Hectar predicted targeting category | other localisation |
| Exons | 12 |
| Cds size | 2553 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791571.2798152-CDS-P-littoralis_Contig76:540984..541266 | 1680791571.2798152-CDS-P-littoralis_Contig76:540984..541266 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 540985..541266 + |
| 1680791571.2959373-CDS-P-littoralis_Contig76:541764..541908 | 1680791571.2959373-CDS-P-littoralis_Contig76:541764..541908 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 541765..541908 + |
| 1680791571.3074813-CDS-P-littoralis_Contig76:542281..542443 | 1680791571.3074813-CDS-P-littoralis_Contig76:542281..542443 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 542282..542443 + |
| 1680791571.31967-CDS-P-littoralis_Contig76:542857..543010 | 1680791571.31967-CDS-P-littoralis_Contig76:542857..543010 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 542858..543010 + |
| 1680791571.3310537-CDS-P-littoralis_Contig76:544207..544342 | 1680791571.3310537-CDS-P-littoralis_Contig76:544207..544342 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 544208..544342 + |
| 1680791571.3414133-CDS-P-littoralis_Contig76:545133..545463 | 1680791571.3414133-CDS-P-littoralis_Contig76:545133..545463 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 545134..545463 + |
| 1680791571.3560297-CDS-P-littoralis_Contig76:546194..546404 | 1680791571.3560297-CDS-P-littoralis_Contig76:546194..546404 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 546195..546404 + |
| 1680791571.3656392-CDS-P-littoralis_Contig76:548030..548199 | 1680791571.3656392-CDS-P-littoralis_Contig76:548030..548199 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 548031..548199 + |
| 1680791571.375601-CDS-P-littoralis_Contig76:548782..549152 | 1680791571.375601-CDS-P-littoralis_Contig76:548782..549152 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 548783..549152 + |
| 1680791571.388239-CDS-P-littoralis_Contig76:549758..549921 | 1680791571.388239-CDS-P-littoralis_Contig76:549758..549921 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 549759..549921 + |
| 1680791571.4003334-CDS-P-littoralis_Contig76:550960..551185 | 1680791571.4003334-CDS-P-littoralis_Contig76:550960..551185 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 550961..551185 + |
| 1680791571.4122355-CDS-P-littoralis_Contig76:552119..552329 | 1680791571.4122355-CDS-P-littoralis_Contig76:552119..552329 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 552120..552329 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig76.184.2 >prot_P-littoralis_Contig76.184.2 ID=prot_P-littoralis_Contig76.184.2|Name=mRNA_P-littoralis_Contig76.184.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=851bp
DANTNFEDGTHFEAFEYQDVADFADNVKNAFDELTGVSPLWFSVENDEGA
GTRGRSFGGKRDGEGGCERFGDWVVGESLVDVFEDEPPAGSDGQEVLKVV
NALLAAYDQNGAKQREGLEECVLAFKNAIEGDLDTRLDTLAERCTDRWID
EQKRTEAAQAGLTELEAQTVARLEGLRQVLKERESTVLVALKHEREANTR
KVLASTLKDSLEEGRMLFDRQVEETELEGRLKQRRHLLNLSSRGVQQEEI
EAALLKAARDQVESLMQVVDKMQKQQTKLLDVLQADKENAATLRQHVSSR
LRDSTKKETTSTTPSTKTGGVAALAAAVTSKHKREVAGGSDTDSSPDEND
QLFEGDLVEACNRLENENLGFRQRLAKKELETLRKEHDDCDTELNDGSRL
AAVLEAKRNLERQVAGLQRANEDRSKELERVRHGTIPTTTEPKTQTKPAM
KAEMNSEDSAKADELKADVVAETETLRQKVKTLRRKLVFKLACNVMRRRF
KDAGMGPGNSPDTPSGPCAGDGCQIEASADRHGLPREVQVHAALLQQKNA
LQREIDRAAREDQELQRAIDRAEGTASAAVDETAGGGGVKGQDNKRERGE
GKEEEKEEAGGQSELEGVTREGLGGGVPGSSSLRTKSSAAVLAVNSRTVS
DRQYVYPRCKKRLRTLVRLKIKAGARLAALRSLAKKNEEAAQAIAIDAVD
GEALKAVLQNENRAREKAAAVLGLLCSRDMAKARTRWLKRALDRSMGLET
KSAAANAANAANAANAADAAADATDAAADVKQASPAKSVAPATAAAGGPA
DSSTVATASVVPGEEATLAADGVTPKGGRGEEGGGSERRGVDIYDEEGGE
E back to topmRNA from alignment at P-littoralis_Contig76:540985..552330+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig76.184.2 ID=mRNA_P-littoralis_Contig76.184.2|Name=mRNA_P-littoralis_Contig76.184.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11346bp|location=Sequence derived from alignment at P-littoralis_Contig76:540985..552330+ (Pylaiella littoralis U1_48)
GATGCAAACACTAACTTCGAGGATGGCACACATTTCGAGGCCTTTGAATA
CCAGGACGTGGCTGACTTTGCCGACAACGTGAAGAACGCCTTCGACGAGT
TAACCGGGGTGAGCCCCCTTTGGTTTAGCGTGGAGAATGATGAAGGTGCC
GGCACGAGGGGTCGCTCCTTCGGCGGGAAACGCGACGGGGAGGGGGGCTG
CGAAAGGTTTGGAGATTGGGTCGTGGGGGAGTCGCTTGTGGACGTTTTCG
AAGACGAACCACCAGCCGGATCTGACGGACAGGTTTGTGCTAAAAACAAT
TCGGTATATTTTTTTTTGGTTGTGGTAGACCTGCGAAATAAGCCCCGACA
AAGAGGTCACAAGGGAGCTACCGTGAACGTGTAGTCCTTTCGTTTCATGT
GCAGGAAGTGCAACGATTGAAAAGGGCACACACCGATCGAATCATTGGTT
ATTCTTCGTGACTGAATGAAGCCCTGATGAATGCTCTACACATGTGTTGT
CGGTCTCGCATCGTGAATGGACAAAAACAACATTTTCATTGTAAAACCCA
TACATCGTAGCTCGTTCATCATTGTCATTCCATTAGCCGTCGATAAAAAA
AAAGGGATACGCCAAGCACCAATGACAACCTGTGGGTGGTATTCCCGGAG
GAATATGGAGCTCTACCGTACAAGTTTTGACCACTTCGAAAATATTATGG
AATCTGTGACTTATACCAGTGACGACGCCCTCTTCTATCGTGCTCGGGCG
CCTCTCTTTTCAATGTTGGCTGGTTGGCAGGAAGTCCTGAAGGTGGTGAA
CGCTTTACTGGCCGCGTATGATCAAAACGGAGCCAAGCAGAGGGAAGGGT
TGGAAGAGTGCGTGCTAGCGTTTAAAAACGCCATCGAGGGGGATTTGGAC
ACGCGGCTAGACACACTGGCGGAGGTGTGTTTTGTAACTTCCAGAGTGAA
TTGTCGCTTAAAAGCTGGTTTGTTCTCGTCTCCCGCACTTGTTTCAGAAG
TTTATCTCACAGTCCTGAACCAAAACGCCCCGCACCCGATGGAGGTAGGC
GCTGTTTCCCATACCTTTGAGATCCTATCTGCGTCTTGGCAAGCGCTCTT
GTGTCAATGAAATACTTTTTGTAAAAGCTGCGTGCGAGGGGAATCATATT
CGATGGTTCATTGCATATTTTTCTTTGTAACATGGAAATGACTTTTTTAC
CGCAGCATTCACTGGCTGTCCTTGAAAATGGTTTGCATCGCGTTACTTAG
CTTCTCGTCTCGTCGCCGCGACAACTGCCACCTTCGATGGCACAAAGAGA
TGCACGGACCGGTGGATCGACGAGCAGAAGAGGACGGAAGCGGCCCAGGC
AGGCCTGACGGAGCTGGAGGCGCAAACGGTAGCGCGTCTCGAGGGTTTGA
GGCAGGTGCTAAAGGAGCGAGAGAGTACCGTGCTAGTCGCGCTGAAGCAC
GAGCGAGAGGTGGGTGCGTAGATGGAGTGACGTTGATATTGACGCTTGAT
CGAAAAGCGACCATTGCAGGAGGTTTGCCTACCAAAATCGACGGCATTTT
CTCCCCCCTCTCGGGCGTTTGTCTGTGTGTGCCGCGTGTTTGTGTTCGCG
ATGGCCTGCGAGATACGGAGCACATCGTGGACTCACCCAAGATCGCTGTG
CTTAATCACCATGATCACCTCATCATAGTTGTCATAGTAATCACCGTCAT
CAACAACGGAGGTCTGAAAAACCTTCATGTCTTAGAACCGCCACCCGATA
GGGCCGAAAATACTGATAAGGGTCGAGGAAACTGGACTGGACTAACAAAA
ATACACCCGAGAACATGAACTACGTGTACAAATAATATTTGGCACAAATG
GGGCACGAAAACAAACGTATCAGGCAAACACGCGCAAGGTTCTGGCGTCC
ACGCTCAAAGACTCCCTCGAGGAAGGCCGGATGTTGTTCGACCGGCAGGT
GGAAGAGACCGAGCTCGAAGGCAGACTAAAGCAACGCCGCCATCTGCTAA
ATCTCAGCTCGCGGGGGGTCCAACAGGTGCGCAATGATTTGCCAGGTCGG
CTCTTCCGCGACGGCATAGCCAGTGGCTCCTCGTAAGACCCCCCCCGACC
CCCAACCCCCGGGCTCAACCCTCCGACAGCGTGGTGGGGGTCGTTCCATG
GACTCACGCACTACAGTACACCACTGAGTCACTCTTAATATTAATATGGA
CTTATCAATGGACCACTCAGTCACTGGAGTTGACTGAGTCAGGAGTGACT
GAGTGGTCTCGTAGATAAGCCACTCCAACGGACAAAAATGATGCTTGTGC
ATCCGATCCCATTCTCGCTAGGCAGTTGTTCCGAGGTTTTGCGGTTCTTG
AGGTCGCATTCATCCACTCTCAGTCAACCCTCGTGAGCCGGCTCGCAGGG
ACCGCGGGCTACCGCACCGTACACTTTCCGCCGACCATTTAATGCGCACT
TTTTTCTTTTGGAATGAGTAAAGCCAACTGCTTGTACGTAAACAGGCGTC
ACAACTATCGAGAACAGGATTCCTGGCGTGTTTTGACTTGGTTTCAGGTA
GATGTTTCCAGTAGGCCACGTACATGTAGTCAGCGGCTGACTAAGTGGCC
TGCGTAGTAGATGAGTTGTATCTTATGAACGAAAGAGTTTCATACAGTTG
GATGCAACCGAGTGGTGCGCCTCCTCCCGCGGAGGTCCGATATGGCAGGA
AGGGACGGACGTCACATGCCCACCCACCCTCCCCCCCACACACATGCGCT
CGTGCGTTCCGTTGGAGGGTGTAAAGTAGCGGCACAAAAAGGATACCTGC
TCGTGGAGCAGACCGGCAGCGTGACCCCACAAACAAAAGTGTATTTGGTA
CAAGTACAGATATACATAGCCTTTCTGCCATGTGTTTGGCGCTTGAAGGG
CAGGCCGCTATCAGGAAAGGGGGGAGGGATCGCGAACGCGTGCGATCAGT
TTTGTAGACTCGGTGAAAAAGTCGGGGTTGTGCAGCTAGACGTGGTTGTT
CCACGTCTTGCTGCTTTCGAGAGCACTCTTGGGTCCGCCGGTTCGTGGCG
ACTTGGTACGAAATAATAAGAAACGCCTTTGAGAAATCTCCCATGTCCAC
GCACGCAGTTGCTATTTTACTCTCTTCACCATTATCGCCGATTCCGACGA
GAGAAGACCGCCATCCACCAAAATTTTTTGTTAGGGTGTCTTGAAGGGTT
GTGTGTTTCTCCCACTCTGTCAGGAGGAAATCGAAGCAGCGTTGCTTAAG
GCCGCGCGGGACCAGGTGGAGAGCCTCATGCAGGTGGTGGACAAGATGCA
GAAGCAACAGACCAAGCTGCTGGACGTTCTGCAGGCCGACAAGGAAAACG
CCGCCACCGTAAGTTTGTGCCGTGTGCATCCTTGAGGGGGGGGGCAGGGG
AACAACAACAGCGGGGTAAAGATGTATGTTCATAGATTGTCATGGTATCC
CGCCATTTCGATGCGATCGGTTACGACTAATAACGAAATTTTCGTTGTTG
TTTTTGTACTGTTACAACAGCAGTAGCAGCAGCAACACCAACACCAACAC
CAACACCAACACCAAGGACACTTTTGTGGTATTGTTGTGCTCTTCTCACG
GGGATTAAAACGTACTTCGAAGTATCTCTACACGACCTGATCATTTTGTA
AAAAAGCTGTGAGATAACGGTTTCGAGTGGCAGACCTGGACCTGCCAGAA
AAGGAAGAGGTACACCAGTAGATCATCGGAGGGGGAAGAGAGGTAGAGGA
GACGCAGGTACCGATATGATCATCTGGCAGACCTGAGGAAAGCACCATCT
GTAGAATTCCCACAGTTGTAGAATGAGCAGTGCAGGGAGGACAAGAAAAG
TTGTTTGATGGAGGAAACGAGGAGACAATCGAAGGATCTGACGTGAGATA
TTTGGAAAATTGTTTTGAACACCTGGTAGTGCAAAAAATTCGCTGAGATG
GGTGATGAAATGGTGGCCACAAGAGACCAAAAGACGGGAAGGCGACGAAA
AAATGAATAATTATTTTTTCTTGTGAGAAGAGTTAGAAACATTGTTGGTA
GGAGTGAGAGCGGTGCTCCGGTTTGAAAGGGGTGCGTGATACATGGTCAA
AAGACGGAGACAACAAGCGATGGAGTACCCTCCCCTACACCCCCCTCAGT
TGCGCCAACATGTCAGCAGCCGGTTGCGCGATTCAACCAAGAAGGAGACA
ACTTCAACAACACCTTCAACAAAAACGGGAGGAGTGGCCGCGTTGGCAGC
AGCCGTCACGAGCAAACATAAAAGGGAGGTGGCGGGCGGGAGCGATACCG
ACAGCAGTCCTGACGAAAACGACCAGCTGTTCGAAGGCGATCTGGTGGAA
GCCTGCAATCGACTGGAAAATGAAAACCTGGGCTTCCGCCAGCGCCTGGC
GAAGAAAGAGCTGGAGACGCTCCGGAAGGAACACGACGACTGCGACACAG
AGCTCAACGACGGGTCTCGTTTGGCCGCGGTAATTAACTACTGCATCGTC
CTCTTGTCTGTGTCAAATTTGTGCGATAGGCCACGTCGTGTTCTTTGCTC
TAGGCCCTTTCTCTCTCGCTCTCTCTTTTCGGCCTACGACCTTTGGCAGC
TTGTTTAGAGCCCGGAGGTCATGCAGCAATGATCCCCTCCGCACACGCTT
TTCGACCAGGATCTATGGGAGATAGGCGTCGGCCACAAGAGGTGGATAGG
ATAGGATGTGAAGTGGGAATATACGACGGCTGTATATCGTTGCGTCAAAC
AACAACGTAATGTGTGGGTTCCTTCGTCTTGGTGTCGATAAAGTAAGTCA
TTGTCCGACAGACAAACAATAAAGTTGGAGTCAGTTTTGAGACCGCGTTC
ATCCTGTACTGGGCAAGAACAGCGGGAGCACAAAAAACAATGTTGTACAC
GCTTGCGTTGATGATGCAGCAGATTCTATGCAACGACAAGAGAGAAAAGA
GAATAAGTGATACTAACTGATCGGTTTCATGGTCACGTGGTATCCTGCAT
CATCACGAAAAACAAAAAGTGCGCTCTCCTTATATTGGGTTCGTGGCCAT
TTCATCCATCCATGTGCAGCATTGTTCTCAATTTCTGTGGCACGGAGTCT
AGCATGACCTCTGTTTGTAGCTTATCGTACTCCATGCCGACTATACGTGC
GTCTCGCCCACGTACGTCTCAAATTTCTTACCCGCCAGTAAATGACAACA
CCTCGCGCAGGTGCTCGAGGCAAAGAGGAACCTGGAGAGACAGGTTGCAG
GGCTCCAGAGGGCCAACGAAGACCGGTCGAAAGAACTGGAGCGGGTTCGG
CATGGAACAATACCGACGACGACGGAACCGAAGACACAAACAAAACCGGC
GATGAAAGCAGAAATGAACTCTGAAGACAGCGCGAAGGCGGACGAGCTCA
AGGCCGACGTAGTGGCCGAGGTGAGCCAACAGAGGGCGAAAAACGAGCTG
GCCGCGAACGGTTTGCAAGCGGGTTCGAAGTTTTGGTTGTCACCGCGCTC
CACTTCTAAAAAAGGTTTTAGACGGCTGTCGGTGATGGATGTACGTTTTA
TTGTTCACCAGAGTCTGCTGCTGCAGCAAAAGTATGCATACGTGAAGGAC
TAGTTTAATGCGGTATCCTAGAGCGCGCACAAGGGGTTGGACAACGCGGG
GCGGAAAACCAAGGTAAAACGTTTGTAACAACACACACAGCGGGTAGCGA
GTATATACTTCCTCTGTATCATAAGTCTGTGCCGTTATGTTTTTACGCCC
CCTCAACGGTGTCCGATGTCTTCGGCGATAATTTTTTCGAAATCTTCGGA
GTTTTTTGGGTTGAAACACATATTATTTTTTTCTTGCGCACTACCCTGCG
CATGGGCTAGCGGCTAACAAAAAAGTAGTCAGGCCAAAAATGGCCGTATC
TAACCCTTTCCAGAGGTGGAGTGGGGGGCGGGGGCGGGGGCAAAAAAAAC
AAACAATGCAATCCCCCCCAAAATTATCCCTAACCCTGAACCTAGCCCCC
CTACCTCAAAGATTCATGTCGAGTCCCTCCTTACTAAAATCAGTATAACA
GTGACGCGACGCTTAAACCAAGACACTTGGGTTTGCCACACTAAAACGAA
GATACTTGGGACTCGTGCTCTATAACAAAGACATCTGGCGGAATCAAAAT
TCTTTAAAAAGGGCAAAAATGGGCATATTTTGACTTCATTTTAGTATAAA
CAACTGGCTTTTTTTTTTGCTTTTTTTTTTGCATCAGCTTCTTTGAGACT
TCATCTTTCGAACGAACCTAACTATAGGATGATCGAAACAGTATGGATGC
GCAAACAACTACACGCCCATAACGGCACAGACTTATGATACAGAGGAAGC
ATATATTTTATTTTATATTTTTTTCCTCCTAGCACGATATGTGCCTGGTT
TGTGACCACGGGCTAGACTGCGGCGGTAGTGAGCTAATGTGAGAATCAAC
AGCAATAGACTAATTCTTCTACGACAGAGCCCCCCCTCCCTATCTTGAAA
TAACGTGTCATGGGTGTTCGCCTCGAGGAAAGGATGCTTTGAAAATATAC
ACAAAGTAATATGTACATCACATTGTTTACTTTTATGCGCCGAGGGCTAT
CAAAATATGAGGTCATGGCGACCAGAGACGCCAGACTTCGGGACGTAGAA
GGCCTGCTGTGGGTTGGTTTCGAAATCAGCCGTAAAAAACGCTCAAAAAA
ACGTAAGGGGGGCTACACCATAGAACGGAGCTCTCCAATACTCCATTATT
TCGCGCAAAAGTTTGTATCTACGAAACAAACCCACCAGAGATACACTCTG
TGCTTGACCTCGCAGGTGCCACCTCTGGCGTTTGCTCCTCCCCCTCCCTC
CCTCCCTCCCTCCTTCTCATAACGACATTCCTCTCTGCGTCAATCAATCA
ATCTTTTATCCCCATGCACCCCCATCAATCACAATGTTTCTATGCCTGTG
TTCAACTCAACTCTCCATTCGGCAAAATCGAAAACAAAATCAACAAAAAA
TTCAAAAACGAAAATACCAAAACAAAACAACAAAACAAACAATCAGACCG
AGACGTTAAGGCAGAAGGTGAAGACTCTGAGGCGCAAGTTGGTGTTCAAG
CTGGCCTGCAACGTTATGAGGAGAAGGTTCAAGGACGCCGGGATGGGCCC
GGGCAACAGTCCTGATACGCCGTCTGGGCCGTGTGCCGGGGACGGTTGCC
AGATCGAAGCTTCAGGTGTTTTTTTTTTTATTGATCGATTGCTTGAATAC
CGCCATCAATTCCCTCTGTGTATTCTGTTTTTCGTATTTTGTCGGTGCCC
TCTCACACCATCGTGCACATTCGTGTGTCTTCATTTTTCGACCACCCCAG
CCTCGCACCTCCCCTGGGAACTCGATCAGTCGCCCCTGCACCCACTCTGC
CCACGAAGTGAAACTTCTGTGGTAATCACTTGAGACAGTATCGAACTGCA
TGTGATACGTGCATGCATACGTGCTTTCCGCGGTTTACCCGATGGCAGTA
CCCTCCCCTCTTGGTGGATGGATGCATCCGTCCATCCGCTGAGCGTTTTC
CTTAGTTCGTTCAATCGTTCGTCCAATCATCTTCGTGCCTTGCCTCCTTT
CTTTTTCTCACATATGTTTCGTTTCCCGCTCGTCGGCGAACACTGCGACA
CCCCGCACCTCGTGCCTCCGCCACGTGACCGTGTGTGTGCGTATGAGTGT
GTGTGTGCGTGTGGCACGCCATGCCTGCCACACTCGTCACATAAATATTG
TAACGGGACGATGATCTGTGGAAACTCTGCGTGGACTGGTTTGTTGAGCA
GACAGGCACGGCCTACCCCGCGAGGTGCAGGTTCACGCCGCGCTCCTCCA
GCAGAAGAATGCCCTCCAGCGCGAGATCGACCGGGCAGCGCGAGAAGATC
AAGAGCTGCAGCGCGCGATAGACAGAGCGGAGGGCACGGCAAGCGCCGCT
GTCGATGAAACCGCCGGAGGAGGTGGAGTGAAAGGGCAAGACAACAAAAG
AGAACGAGGAGAAGGAAAGGAGGAGGAGAAGGAGGAAGCTGGCGGGCAGT
CGGAGCTGGAGGGGGTAACAAGAGAGGGTTTGGGCGGAGGAGTGCCCGGC
AGTAGCTCTCTACGAACGAAGTCCTCTGCGGCGGTGCTAGCGGTTAACTC
TCGAACCGTCAGCGACCGGTAAGTGATGGAGGCAGGCTGGACGGTTCGAC
TTTCACTCCATTTAGCTTTTTATCAGCTTTACCTCGATTAAATTAGGAGC
TGGGGTGTACCGTCGGTGAAAACAAACAAAATCTCGACACGCAGGAGGAA
GAAACAACGCTCTCCTCGACCTTTTGTTTAGTCTTCAAGGTGTCGGAAGT
AACGTAGGCTTTCGTGCCGTTTTTACCGGTGGGTGTCGCGGTCTTGGCGG
CGAACAAACAATCCTAACGAAGGCACACGAGGCTGGATGTTTTCTTGGAG
TGGGCAAGTGATGGGGGGGGGGGTAGTGCCACCCGAGAGGCGGACCACCA
CACGGAAAGCAAGAAGAGATAATTATGTAGAGATATGGTGAGTGTACGTC
GCGTGCCTCACTTGTTGTTGTCGTGGTCGCCTTTTCTTTATTGTTCCGTC
GGTCTCCTTTTGCCAACCACGAGTTGATCGACGAGAGAAGGGCGGGCATT
TGACGCGCCCATGCAAGCCAAAAGCCAAAAGACGCAGTAAGAACAGCAGT
AGAACACGGTTTTTTGTGTCTGTTCGTCGCATTGTTTTTCGTGGTGGTAC
TGTATCGCTGTCTCCCCCCAACAGTCAATATGTTTATCCGCGGTGCAAGA
AAAGGTTGAGGACGTTGGTGAGACTGAAGATCAAGGCCGGGGCGAGGCTG
GCCGCTCTCCGAAGTCTGGCCAAGAAGAACGAGGAGGCCGCGCAAGCGAT
CGCCATAGACGCCGTCGATGGCGAAGCCCTCAAAGCGGTGAGAAATACGT
AACAAGAGAGAAAAAAGTCGAAGCAACATTTTGGTATTATCATACACTCA
CGGAGCTCTGCTGTTTAGATTGCAAGTTGACTCTTCGGTCCGGTCGTGTT
GCTCCCAAAACATTCTCTTCGAGGCTTGTTAAGGATATTCCTTTGGGACG
GGGGGGGGCGATCGTTCTTCATCCGCGGAGAACCCCGCCCCCGCCCCGGC
TATACTTCCTGTATTTTTCCATGTCATCTGGCTTTTCAGTGTCCATTCGC
GCCTTCTTCTTCTCCGAAACTGCCGTATATCCACGTTGTTTCGACGGTGC
TTGCGAAAGGTGGGCCTGTTTCTACTGTAGCACCTGACTCGACACTTACG
AACACACACTCAAACAGACAAAACCCGCCTTAGAAAAGCAGGGCATTAAA
CACACCAAAGAAACATCATTTTCTGCTGCGGCGGTGGTGGTGTTTCTCCT
GAATCAGACCAGACCAGCAGGGCAGGCTAAGAGTTAAAGAGAGGCACCGG
GCGACGACCGGCATGTGGTTGGTCGGTTTGATGCACAGGCGGCCCGCAAC
CCACCGCGGTGACAAGTCCACTTGGTGTGTGGCGGCGGGGCATTGATATA
GCTTAACGTTAGCGCTCATATCGTGGCCGGCGCGCTGGCGTGTTCGTCAC
TTACAAGTTATGAGTCGGCAGTGTTGTGTGCATGCGTGCGAAAAAAGAGA
AAGGTACATCGCGAACAATGGTTGTTACAATTTGTGTAGCGGTGTGGCGC
GGGAGATGTCGTATTTCTCGTCAAAAGATCGGCCGATGGGTCACCGGATG
GTCCGGTTGGTTGAGTGGGGGTGAAAAAACCCGAAGCGTTCACGAACAAC
CCCAAACCACCAAAACCAGACGAACCTTTCTACAAAAAACTTTCACGCAC
GTGGGTGCTCCGCAGCATGAATGGTCGAAAATGAAGAATTGCCTTCTTAT
CATATTCGATTTGAATTTACAAGGAGGAGTGATTGGTCGAAAGCGAGAAA
AACGATTGTTCGATTTGAGTTCACAGGTGCTACAGAACGAGAATCGCGCG
CGGGAGAAAGCTGCGGCCGTCCTCGGGCTCCTCTGCTCTCGTGACATGGC
GAAGGCGCGCACTCGTTGGCTGAAGAGAGCCCTGGACAGAAGCATGGGAC
TTGAAACTAAAAGTGCTGCTGCGAATGCTGCGAATGCTGCGAATGCTGCG
AATGCTGCGGATGCTGCTGCGGATGCTACGGATGCTGCTGCGGATGTGAA
GGTGCTGTATGTACAGTATATATTGGGAACAGTTTGATTACGTTCACGAC
CGCCGCAGAAGAATAGCTTCTGCACGGGAAGAAGACTAGAGACTTTCTCA
CCACGTCATACCTGCAATATCTCGCAGTACTCAATCAATGCGCTTTTTTC
AGCCGTCGTCTCGTGTGTTTCATTTCTGCGTTCCTTCATTTTTGCGCCCG
AGTGTTTCATTTTTGCATTCCTTCAGGCTGATTCGCGGTGACGACGCCAA
GCTTAGACAACAGCATTTTCTCACGCGGTTTTTTCGAGTCACATGTCATA
GAAGACTCTCAAAAATTGTGAGCATGCTCTACGGACCACTTCTGCCTGCA
CGCAACTTTCGGAGCAACTTTCGAAAGGCGTTTCTTGTCCGAGATGGGTA
TCTTCGTGTAAAGGTTATTCGGACTTGACAACTTATTCAGTGTGATGTCG
GCTCTTTTGGGCACTTTTACGCGATAATATTGAGCCAAACCTACCTACGT
CAGTTCGGCGATTTGACAAAAACAAACTGCGTACACCTATATTGAGTCCC
ATACGATAGAAAATATCTCTGCACATTACCTGAGTAAAAGTCATTGACCA
GAGCAATTTCTCGCCTCTAAAGCCTTAAACAAAAATCCAGCAATGACATC
ATCATGGTCTTCTGATCTCGGTGGCGGTAAATTTGTTATGGCACCCTACT
TGTCGTAATCGGGTGTTTATTGCGTTCTGGACACAGCAGTAGTCTGTTGA
CTGAATATATTTGGGGTCTTGCTTCACTGTGGACCATCCTGTATTAAGAA
GTTTTTTTTCCGTTTTCATGCTATCTACGATAGTGTACCACAGAGTGTTG
CGAACCGGACGATGGAGAAAAATGTCTCAAATGTGCTAGCTGGTGCGCTG
GTGCCCCCCCCCCCCTCCCGCCCGTGCCCCACCAGCAAGCTTCGCCAGCG
AAATCGGTCGCGCCTGCTACTGCTGCTGCTGGCGGCCCTGCTGACTCTTC
CACCGTCGCTACCGCGAGCGTTGTTCCCGGAGAGGAAGCAACTCTGGCTG
CCGATGGGGTTACGCCAAAGGGGGGAAGAGGAGAAGAGGGGGGAGGAAGT
GAAAGAAGAGGGGTCGACATTTACGATGAAGAGGGTGGTGAGGAGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig76:540985..552330+ >mRNA_P-littoralis_Contig76.184.2 ID=mRNA_P-littoralis_Contig76.184.2|Name=mRNA_P-littoralis_Contig76.184.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2553bp|location=Sequence derived from alignment at P-littoralis_Contig76:540985..552330+ (Pylaiella littoralis U1_48)
GATGCAAACACTAACTTCGAGGATGGCACACATTTCGAGGCCTTTGAATA
CCAGGACGTGGCTGACTTTGCCGACAACGTGAAGAACGCCTTCGACGAGT
TAACCGGGGTGAGCCCCCTTTGGTTTAGCGTGGAGAATGATGAAGGTGCC
GGCACGAGGGGTCGCTCCTTCGGCGGGAAACGCGACGGGGAGGGGGGCTG
CGAAAGGTTTGGAGATTGGGTCGTGGGGGAGTCGCTTGTGGACGTTTTCG
AAGACGAACCACCAGCCGGATCTGACGGACAGGAAGTCCTGAAGGTGGTG
AACGCTTTACTGGCCGCGTATGATCAAAACGGAGCCAAGCAGAGGGAAGG
GTTGGAAGAGTGCGTGCTAGCGTTTAAAAACGCCATCGAGGGGGATTTGG
ACACGCGGCTAGACACACTGGCGGAGAGATGCACGGACCGGTGGATCGAC
GAGCAGAAGAGGACGGAAGCGGCCCAGGCAGGCCTGACGGAGCTGGAGGC
GCAAACGGTAGCGCGTCTCGAGGGTTTGAGGCAGGTGCTAAAGGAGCGAG
AGAGTACCGTGCTAGTCGCGCTGAAGCACGAGCGAGAGGCAAACACGCGC
AAGGTTCTGGCGTCCACGCTCAAAGACTCCCTCGAGGAAGGCCGGATGTT
GTTCGACCGGCAGGTGGAAGAGACCGAGCTCGAAGGCAGACTAAAGCAAC
GCCGCCATCTGCTAAATCTCAGCTCGCGGGGGGTCCAACAGGAGGAAATC
GAAGCAGCGTTGCTTAAGGCCGCGCGGGACCAGGTGGAGAGCCTCATGCA
GGTGGTGGACAAGATGCAGAAGCAACAGACCAAGCTGCTGGACGTTCTGC
AGGCCGACAAGGAAAACGCCGCCACCTTGCGCCAACATGTCAGCAGCCGG
TTGCGCGATTCAACCAAGAAGGAGACAACTTCAACAACACCTTCAACAAA
AACGGGAGGAGTGGCCGCGTTGGCAGCAGCCGTCACGAGCAAACATAAAA
GGGAGGTGGCGGGCGGGAGCGATACCGACAGCAGTCCTGACGAAAACGAC
CAGCTGTTCGAAGGCGATCTGGTGGAAGCCTGCAATCGACTGGAAAATGA
AAACCTGGGCTTCCGCCAGCGCCTGGCGAAGAAAGAGCTGGAGACGCTCC
GGAAGGAACACGACGACTGCGACACAGAGCTCAACGACGGGTCTCGTTTG
GCCGCGGTGCTCGAGGCAAAGAGGAACCTGGAGAGACAGGTTGCAGGGCT
CCAGAGGGCCAACGAAGACCGGTCGAAAGAACTGGAGCGGGTTCGGCATG
GAACAATACCGACGACGACGGAACCGAAGACACAAACAAAACCGGCGATG
AAAGCAGAAATGAACTCTGAAGACAGCGCGAAGGCGGACGAGCTCAAGGC
CGACGTAGTGGCCGAGACCGAGACGTTAAGGCAGAAGGTGAAGACTCTGA
GGCGCAAGTTGGTGTTCAAGCTGGCCTGCAACGTTATGAGGAGAAGGTTC
AAGGACGCCGGGATGGGCCCGGGCAACAGTCCTGATACGCCGTCTGGGCC
GTGTGCCGGGGACGGTTGCCAGATCGAAGCTTCAGCAGACAGGCACGGCC
TACCCCGCGAGGTGCAGGTTCACGCCGCGCTCCTCCAGCAGAAGAATGCC
CTCCAGCGCGAGATCGACCGGGCAGCGCGAGAAGATCAAGAGCTGCAGCG
CGCGATAGACAGAGCGGAGGGCACGGCAAGCGCCGCTGTCGATGAAACCG
CCGGAGGAGGTGGAGTGAAAGGGCAAGACAACAAAAGAGAACGAGGAGAA
GGAAAGGAGGAGGAGAAGGAGGAAGCTGGCGGGCAGTCGGAGCTGGAGGG
GGTAACAAGAGAGGGTTTGGGCGGAGGAGTGCCCGGCAGTAGCTCTCTAC
GAACGAAGTCCTCTGCGGCGGTGCTAGCGGTTAACTCTCGAACCGTCAGC
GACCGTCAATATGTTTATCCGCGGTGCAAGAAAAGGTTGAGGACGTTGGT
GAGACTGAAGATCAAGGCCGGGGCGAGGCTGGCCGCTCTCCGAAGTCTGG
CCAAGAAGAACGAGGAGGCCGCGCAAGCGATCGCCATAGACGCCGTCGAT
GGCGAAGCCCTCAAAGCGGTGCTACAGAACGAGAATCGCGCGCGGGAGAA
AGCTGCGGCCGTCCTCGGGCTCCTCTGCTCTCGTGACATGGCGAAGGCGC
GCACTCGTTGGCTGAAGAGAGCCCTGGACAGAAGCATGGGACTTGAAACT
AAAAGTGCTGCTGCGAATGCTGCGAATGCTGCGAATGCTGCGAATGCTGC
GGATGCTGCTGCGGATGCTACGGATGCTGCTGCGGATGTGAAGCAAGCTT
CGCCAGCGAAATCGGTCGCGCCTGCTACTGCTGCTGCTGGCGGCCCTGCT
GACTCTTCCACCGTCGCTACCGCGAGCGTTGTTCCCGGAGAGGAAGCAAC
TCTGGCTGCCGATGGGGTTACGCCAAAGGGGGGAAGAGGAGAAGAGGGGG
GAGGAAGTGAAAGAAGAGGGGTCGACATTTACGATGAAGAGGGTGGTGAG
GAG back to top
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