mRNA_P-littoralis_Contig76.155.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig76.155.1
Unique NamemRNA_P-littoralis_Contig76.155.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: D7FQ82_ECTSI (3-ketoacyl-(Acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ82_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 4.920e-160
Identity = 261/305 (85.57%), Postives = 268/305 (87.87%), Query Frame = 1
Query:   55 MKLTNLSIACMAGYARAFIAPSVSLSSRFVQPTERTALSTLAISSXXXXXXXTPSSLRPRMSIAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQEAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 969
            MKL  LSIACMAGYARAF+ P  + SS F QP  R  LST A+               PRMSIAIVTGASRGLGAAIAKDLA  G SVIVNYAASSGAAEEVVK+IQEAGGKAAAVKADVSK DEV  LF DAAAAFPDEKIEVVVNNAGITRDTL MRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFA RGVTVNAVCPGFIESDMTA+LDQ+AIKKMIPLGRLGKP+EIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA
Sbjct:    1 MKLATLSIACMAGYARAFVVPPAARSS-FAQPAARAGLSTAAVGGS------------PRMSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKAAAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 292          
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: A0A835YXE5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE5_9STRA)

HSP 1 Score: 327 bits (837), Expect = 4.060e-104
Identity = 169/244 (69.26%), Postives = 200/244 (81.97%), Query Frame = 1
Query:  235 MSIAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQEAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAIG 966
            M IA+VTG+SRG+GAAIA  LA  G  V++NYAASSGAA+ VV  I+  GG+A A++AD SKL +V A+FK A  AFP + +EV+VNNAGITRDTL +RMKPDQWQ VIDLNL+GVFY SQAA K MLK+R GRI+NISS+VG IGNPGQANYAAAK GVI MT +M +EFA RGVTVNAVCPGFIESDMTA+L  +AIK MIP+ RLGK  E+AG+V ++AT+ SA YITG TF VDGG+AIG
Sbjct:    1 MKIAVVTGSSRGIGAAIAASLAEKGCKVVINYAASSGAADAVVADIKAKGGEAVAIQADCSKLADVEAMFKGAVEAFPGDNVEVLVNNAGITRDTLVLRMKPDQWQDVIDLNLTGVFYCSQAAAKTMLKKRAGRIVNISSVVGQIGNPGQANYAAAKGGVIAMTRTMGKEFASRGVTVNAVCPGFIESDMTADLQLDAIKAMIPMARLGKASEVAGLVTYLATDPSADYITGHTFNVDGGIAIG 244          
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: B4VS33_9CYAN (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VS33_9CYAN)

HSP 1 Score: 302 bits (773), Expect = 1.800e-94
Identity = 158/241 (65.56%), Postives = 197/241 (81.74%), Query Frame = 1
Query:  241 IAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQEAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAI 963
            +AI+TGASRG+G A+A  LA+ G+ V+VNYA+SSGAA+EVV  I EAGG A A++ADVSKLDEV  L K+    F   +++V+VNNAGITRDTL MRMKPD WQ+VIDLNL+GVF+ ++AA K+MLKQ+ GRIINI+S+ G +GNPGQANY+AAKAGVIG T ++A+E A RG+TVNAV PGFIE+DMT ++  E I K IPLGR GKPEEIAGMV+F+A + +AAYITGQ F VDGGM +
Sbjct:   14 VAIITGASRGIGRAVAFALAAEGAKVVVNYASSSGAADEVVAKITEAGGDAIALQADVSKLDEVETLVKETKDKFG--RLDVLVNNAGITRDTLLMRMKPDDWQAVIDLNLTGVFFCTRAASKIMLKQKSGRIINIASVAGQMGNPGQANYSAAKAGVIGFTKTVAKELASRGITVNAVAPGFIETDMTKDIKSEDIIKYIPLGRYGKPEEIAGMVRFLAADPAAAYITGQVFNVDGGMVM 252          
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: A0A7S0I0W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I0W7_9CRYP)

HSP 1 Score: 302 bits (774), Expect = 2.360e-94
Identity = 168/250 (67.20%), Postives = 196/250 (78.40%), Query Frame = 1
Query:  229 PRMSIAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELD---QEAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 969
            P M++A+VTGASRG+G +IA +L   GS+VIVNYA S  AAE VVK ++  G KA AVKAD S   +V A+FK  A +F DE I V+VNNAGITRDTL MRMK + W+SVID+NL GVF  SQAA K+MLK+R GRIINISS+VG IGNPGQANYAAAK GVIGMTMS A+EFAGRGVTVN VCPGFIESDMTAEL+    E +KKMIPLGRLG   E+AGMV F+A + +  Y+TG  F VDGG+AIGA
Sbjct:   23 PTMALALVTGASRGIGKSIALELGKRGSNVIVNYAGSQQAAEGVVKELEGMGVKAMAVKADTSDPAQVDAMFKAIAESF-DEPISVLVNNAGITRDTLVMRMKFEDWKSVIDVNLGGVFLCSQAAAKVMLKKRAGRIINISSVVGQIGNPGQANYAAAKGGVIGMTMSNAKEFAGRGVTVNCVCPGFIESDMTAELNAEYMEEVKKMIPLGRLGLASEVAGMVAFLAMDPACNYVTGHCFNVDGGIAIGA 271          
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: A0A2V3ICR5_9FLOR (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICR5_9FLOR)

HSP 1 Score: 302 bits (773), Expect = 9.670e-94
Identity = 160/243 (65.84%), Postives = 197/243 (81.07%), Query Frame = 1
Query:  241 IAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQEAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 969
            +A+VTG+SRG+G AIA +L   G +V+VNY +S+ AAEEVV  I+ +GG A AVK +VSK D+V ALFK A   F   +I+VVVNNAGITRDTL +RMK DQWQ VIDLNL+GVF  +QAA KLMLKQR GRI+NI+S+VGLIGNPGQ NY AAKAGVIG+TMS A+E A RG+TVNAV PGFI SDMTA L  + IKKMIP+ R G+PEE+AG+V+++A + S+AYITG TF+VDGG+AIG+
Sbjct:   63 VALVTGSSRGIGKAIALELGKHGCNVVVNYTSSADAAEEVVTTIKSSGGDAIAVKGNVSKSDQVDALFKAAKDHFG--RIDVVVNNAGITRDTLMLRMKQDQWQDVIDLNLTGVFLCTQAAAKLMLKQRSGRIVNITSVVGLIGNPGQVNYGAAKAGVIGLTMSAAKECASRGITVNAVAPGFINSDMTANLPVDDIKKMIPMNRFGEPEEVAGLVRYLALDPSSAYITGHTFSVDGGIAIGS 303          
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: Q00GM6_KARBR (Plastid beta-ketoacyl-ACP reductase protein n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GM6_KARBR)

HSP 1 Score: 301 bits (772), Expect = 3.410e-93
Identity = 169/257 (65.76%), Postives = 197/257 (76.65%), Query Frame = 1
Query:  220 SLRPRMS-----IAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQEAIK---KMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAIG 966
            SL P M+     + IVTG SRGLG AIA DLA  G  +IVNYAAS+ AAEEVV+ I++ GG   AV+AD+S  + V  LFK AA AF DE + V+VNNAGITRD L MRMKP QW  VI+ NL+GVF+ +QAA K+MLK+RKGRIINI+S+VG IGNPGQANYAAAK GVI MTMSMAREF  RG+TVNAV PGFIESDMTAEL QE +    K IPLGR GKPEE+AG+VK++A + SA YITG    VDGG+AIG
Sbjct:   74 SLSPSMADAEKPVVIVTGGSRGLGKAIALDLAKEGCKIIVNYAASAAAAEEVVEEIKKLGGDGVAVQADMSTKEGVDGLFKAAAEAF-DEPVGVLVNNAGITRDALTMRMKPAQWTDVINTNLNGVFFAAQAASKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMSMAREFGSRGITVNAVAPGFIESDMTAELPQEIVDLQLKNIPLGRFGKPEEVAGLVKYLALDPSALYITGHCLNVDGGIAIG 329          
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: A0A4D9D9L3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9L3_9STRA)

HSP 1 Score: 299 bits (765), Expect = 1.070e-92
Identity = 155/246 (63.01%), Postives = 200/246 (81.30%), Query Frame = 1
Query:  232 RMSIAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQEAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 969
            + ++AIVTGASRG+G A A +LA  G  V+VNYA+S+ +A  VV+ I+  G +A A+KAD+SK +EV ALFK+ AAAF D  + ++VNNAGIT+D L M MKP+ WQ+VID+NLSGVFY S+AA  +ML+ R+GRIIN++S+VG IGNPGQANYAAAK GV+G+T + A+EFA RGVTVNAVCPGFIESDMT +LD + IKK IPLGRLG+  E+AGMV+F+A + +AAYITG +F VDGG+AIG+
Sbjct:   48 KANVAIVTGASRGIGKACALELAQHGVKVVVNYASSADSALAVVEEIKALGSEAVAIKADMSKPEEVEALFKETAAAFKDP-VNILVNNAGITKDGLVMTMKPEAWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGRASEVAGMVRFLAVDPAAAYITGHSFDVDGGIAIGS 292          
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: UPI001882A5CA (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001882A5CA)

HSP 1 Score: 297 bits (760), Expect = 1.590e-92
Identity = 159/248 (64.11%), Postives = 201/248 (81.05%), Query Frame = 1
Query:  226 RPRMS--IAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQEAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAI 963
            R R+S  +AIVTGASRG+G AIA  LA+ G+ V+VNYA+SSGAAE+VV AI +AGG A A +ADVSKL++V AL       F   +I+V+VNNAGITRDTL +RMKP+ WQ+VIDLNL+GVF  ++AA K+MLKQ+ GRIINI+S+ G +GNPGQANY+AAKAGVIG T ++A+E A RG+TVNAV PGFIE+DMT++L  + I K IPLGR GKPE+IAGMV+F+A +++AAYITGQ F VDGGM +
Sbjct:    8 RDRLSDRVAIVTGASRGIGRAIALALAAEGAKVVVNYASSSGAAEQVVAAITDAGGNAIASQADVSKLEQVEALVNQTLEHFG--RIDVLVNNAGITRDTLLLRMKPEDWQAVIDLNLTGVFLCTRAASKVMLKQKSGRIINIASVAGQMGNPGQANYSAAKAGVIGFTKTVAKELASRGITVNAVAPGFIETDMTSDLKSDDIVKYIPLGRYGKPEDIAGMVRFLAADEAAAYITGQVFNVDGGMVM 253          
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: A0A0V7ZG77_9CYAN (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V7ZG77_9CYAN)

HSP 1 Score: 297 bits (760), Expect = 1.950e-92
Identity = 153/244 (62.70%), Postives = 199/244 (81.56%), Query Frame = 1
Query:  232 RMSIAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQEAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAI 963
            R  +A+VTGASRG+G AIA +LA  G++V VNYA+SSGAAEE+V+AI +AGG A A++ADVSK ++V AL K     F  ++++++VNNAGITRDTL +RMKP+ WQ+VIDLNL+GVF  ++A  K+MLKQR GRIINI+S+ G +GNPGQANY+AAKAGVIG+T ++A+EFA R +TVNAV PGFI +DMT +L  + I K IPLGR GKPEE+AGMV+F+A++ +AAYITGQ F VDGGM +
Sbjct:   18 RSQVAVVTGASRGIGRAIALELAKMGATVAVNYASSSGAAEELVEAITKAGGSAIALQADVSKAEQVDALIKAVMEKF--KRVDILVNNAGITRDTLLLRMKPEDWQAVIDLNLTGVFLCTRATSKIMLKQRSGRIINIASVAGQMGNPGQANYSAAKAGVIGLTKTLAKEFAAREITVNAVAPGFIATDMTNDLKNDEILKYIPLGRFGKPEEVAGMVRFLASDPAAAYITGQVFNVDGGMVM 259          
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Match: A0A7S3Z1W0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z1W0_9EUKA)

HSP 1 Score: 298 bits (763), Expect = 8.370e-92
Identity = 159/246 (64.63%), Postives = 197/246 (80.08%), Query Frame = 1
Query:  241 IAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAEEVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQEAIK---KMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 969
            +AIVTG SRG+G AIA  L S G  V+VNYA S+ AAE+VV+ I++ GG   AV AD+S ++ V ALFK A  A+ DE +E++VNNAGITRD L +RMKPDQW  VI+ NL+GVFY  Q+A K+MLK+RKGRIINI+S+VGLIGNPGQANYAAAK GVIGMTM+ A+EFA RGVTVN++ PGFIES+MT  L  E I+   K IPLGR GKPEE+AG+V+++A + SAAYITG TF++DGG+AIGA
Sbjct:   91 VAIVTGGSRGIGKAIALALGSEGCRVVVNYAKSADAAEKVVEEIKQLGGDGVAVAADMSTMEGVQALFKAAGEAY-DEPVEILVNNAGITRDNLVLRMKPDQWTDVINTNLNGVFYALQSAAKVMLKKRKGRIINIASVVGLIGNPGQANYAAAKGGVIGMTMATAKEFAARGVTVNSIAPGFIESEMTQALKPEIIETVTKGIPLGRFGKPEEVAGLVRYLALDPSAAYITGHTFSIDGGIAIGA 335          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ82_ECTSI4.920e-16085.573-ketoacyl-(Acyl-carrier-protein) reductase, 3-oxo... [more]
A0A835YXE5_9STRA4.060e-10469.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B4VS33_9CYAN1.800e-9465.563-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax... [more]
A0A7S0I0W7_9CRYP2.360e-9467.20Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A2V3ICR5_9FLOR9.670e-9465.843-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax... [more]
Q00GM6_KARBR3.410e-9365.76Plastid beta-ketoacyl-ACP reductase protein n=1 Ta... [more]
A0A4D9D9L3_9STRA1.070e-9263.01Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
UPI001882A5CA1.590e-9264.113-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax... [more]
A0A0V7ZG77_9CYAN1.950e-9262.703-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax... [more]
A0A7S3Z1W0_9EUKA8.370e-9264.63Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:420907..430398 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQ82
PFAMsadh_short,adh_short_C2
Model size2109
Max annot lvl2759|Eukaryota
KEGG rclassRC00029,RC00117
KEGG koko:K00059
KEGG ReactionR04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671
KEGG Pathwayko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212
KEGG ModuleM00083,M00572
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0031967,GO:0031975,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0055114
Exons7
Evalue1.75e-166
EggNOG OGsCOG1028@1|root,KOG1200@2759|Eukaryota
Ec32 ortholog description3-ketoacyl-(acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase.
Ec32 orthologEc-01_007100.1
EC1.1.1.100
Description3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity
Cds size918
COG categoryIQ
BiGG ReactioniRC1080.CRv4_Au5_s3_g10590_t1
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.155.1prot_P-littoralis_Contig76.155.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig76 420961..429261 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791569.6277912-UTR-P-littoralis_Contig76:420906..4209601680791569.6277912-UTR-P-littoralis_Contig76:420906..420960Pylaiella littoralis U1_48UTRP-littoralis_Contig76 420907..420960 +
1680791569.7693794-UTR-P-littoralis_Contig76:429261..4303981680791569.7693794-UTR-P-littoralis_Contig76:429261..430398Pylaiella littoralis U1_48UTRP-littoralis_Contig76 429262..430398 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791569.6402586-CDS-P-littoralis_Contig76:420960..4211611680791569.6402586-CDS-P-littoralis_Contig76:420960..421161Pylaiella littoralis U1_48CDSP-littoralis_Contig76 420961..421161 +
1680791569.6498115-CDS-P-littoralis_Contig76:425408..4255101680791569.6498115-CDS-P-littoralis_Contig76:425408..425510Pylaiella littoralis U1_48CDSP-littoralis_Contig76 425409..425510 +
1680791569.660176-CDS-P-littoralis_Contig76:425936..4260621680791569.660176-CDS-P-littoralis_Contig76:425936..426062Pylaiella littoralis U1_48CDSP-littoralis_Contig76 425937..426062 +
1680791569.6773348-CDS-P-littoralis_Contig76:426745..4268171680791569.6773348-CDS-P-littoralis_Contig76:426745..426817Pylaiella littoralis U1_48CDSP-littoralis_Contig76 426746..426817 +
1680791569.6886544-CDS-P-littoralis_Contig76:427613..4277631680791569.6886544-CDS-P-littoralis_Contig76:427613..427763Pylaiella littoralis U1_48CDSP-littoralis_Contig76 427614..427763 +
1680791569.7103837-CDS-P-littoralis_Contig76:428219..4284041680791569.7103837-CDS-P-littoralis_Contig76:428219..428404Pylaiella littoralis U1_48CDSP-littoralis_Contig76 428220..428404 +
1680791569.7227368-CDS-P-littoralis_Contig76:429179..4292611680791569.7227368-CDS-P-littoralis_Contig76:429179..429261Pylaiella littoralis U1_48CDSP-littoralis_Contig76 429180..429261 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig76.155.1

>prot_P-littoralis_Contig76.155.1 ID=prot_P-littoralis_Contig76.155.1|Name=mRNA_P-littoralis_Contig76.155.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=306bp
MKLTNLSIACMAGYARAFIAPSVSLSSRFVQPTERTALSTLAISSSSSSS
SSTPSSLRPRMSIAIVTGASRGLGAAIAKDLASTGSSVIVNYAASSGAAE
EVVKAIQEAGGKAAAVKADVSKLDEVTALFKDAAAAFPDEKIEVVVNNAG
ITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISS
IVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDM
TAELDQEAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQTFTVDGG
MAIGA*
back to top

mRNA from alignment at P-littoralis_Contig76:420907..430398+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig76.155.1 ID=mRNA_P-littoralis_Contig76.155.1|Name=mRNA_P-littoralis_Contig76.155.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9492bp|location=Sequence derived from alignment at P-littoralis_Contig76:420907..430398+ (Pylaiella littoralis U1_48)
CTTGGTACTAACTGCTGTGTAGCGTGGGAACAGCAAACGAGCACCCACTG CAAGATGAAGCTGACCAACCTCTCGATCGCCTGCATGGCTGGGTACGCTC GGGCGTTCATTGCTCCGTCTGTCTCCTTGAGCAGCAGATTTGTGCAGCCT ACTGAGCGCACAGCTCTGTCGACGTTGGCGATCAGCAGCAGCAGCAGCAG CAGCAGCAGCACCCCTTCCTCCCTGCGTCCACGGATGAGCATTGCCATTG TCACGGTGAGGGGGGGTGGATGCGCAAGCAAACCTTTTGGTTGATAACTT TGAGTAGAGGGGCATTGGCTGCCTTCGGTGGAACCATCATTTCCGAAACA TGCGAACTTTTCTCCCAACGCCAACAATGCGCACAAAACGCACTCTCACA CACCTTTTCCAAGGATCAAATCGTATGAGCAGGCTGTCTGTTGGCTAGTT CTGTTGTCTGTGTTGCCAAGCCACGATTACACATCTACACAAATTCCACA GCAGCCATGGTGATGCGGACTTCCTAGCTCGCACGCGTACAAGTACGCTC CAGTGAAACGATTTATGTACTGGATACATGTACGAATCGGTGTTGTATGA TGTGCACACATCTCAAGTACAGATTATATGCACCTCTGACACAAGTGATG GCCGGGTTCCCGGGTTCCCGCCAACTCGATCATCCATAATCCACACCACA CACAACAGAAGATCCGTCTGCAAAGATGGCAGAGATGCGCATGATACAGG TGTGTAAAACAGAGTTAAGACAGACAGAGTTTTGAAGTGTGATTTATGAT TTTATACCGGTCGCCCCAGTGGTTCAGTTGACTATCTCCGAAATCCTCTG ACACCTACGCTTGAGTTCTAATCCCAGTGCAGCAACACGATCCGGAATTC TTCTCATTCTCATGTCATGCGTGACGGTGGAAAACGATTAATTCGTGAGT AAACAAAATTTGAAGTGCGACGAGGGGAAAGGGATGGCTGTGTACCCTTT CTCGCGAGAAAAAATGAAGACAAGTACTGTACTCCAGAGGGAAGTCGAGA AAGAAAATAAAAGAAATAAAAGAAAAAAAACTCCTGTGTTGACTTCCTAC TGTGTGACCCCGGTTGGAGCGTCTACCTACCCGAAAGGTTAGCGTGGCGT CCAGTTAAAGGGATGTCAACACACACACCCATATCATATGGCACGTGCTC CGAACTCCAAGTATCTTGCATGCAGGCGGTAACATCGAGAGGCAAATAAC ACATAGCGGATTGCTGAATCACAGTTGTTGGTTGGAGTTGTGTCACAGTA GTGGATGTCCCGAAAGGTACTTAACAGGGGTTCGACCGAGGAGGTTTGCT GTGTCACAGTGTGTGGGTCCCGAAAGGTACTTCACGGGAATTCGACCGAG GAGGATAGCTGTAGGGCTACAGTGTGTGTCCCGAATCGTAGTTTACGGGA ATTCGACCGAGGAGGTGGTGAATTTCGGTACGCTGGCCCCTCTGCGTGGA AGGGTGAACGAGGACGTGTTTGTGTCCTTCGGGACCGCCTAGGACATTTC GGAAAAGTTGGTCGTCGAAGAACACGTCGAAAGGATACCGCAGTTGTACA GATGAGCTCGGAGCAGGAATCATGTGATGATGTATGTAGAAGCAGCAGCA CCGACAGCAGGAAAAGCATCCAGAAGTAGCAGGAGCAGGACGAAGGGCTG TGCGTGCACTGCCTCAGGAGTCCCTGTGTGTGCTGGTTTTGCTTCGCAGT TGACACTAGGTACGACTTTGAGACTGCTGTACGCTGCTGCTGCTGCTGCT GTAAGTAGCACGAGCACCCAGCACACCAGGCCGGAGCAGGCCCGAGACAC ATCCGAAGATTAGGGGTTTCCACACGGGCGCCTACATAACATCGGTATTC TCGTTTTTTTGCTGTTCGTATCCCCGGCGACATTTTTAATGTCACGTGCT AGTGGAGATATATGTCCCTGACATGGGCGAGACCTTCCCCCTACCCGCTA AAAGTAGATATCTGGGAATCGAGGATAACCGGCATTCACTGAACCCCCCT TTTTTTCGGGAAAGCAGAGAGTAGTGTTGCTTGCTGCAGAAAGCACGCCC AAAAGTACGCACCGACCCATCCTCGTACTACCCCTCGAACCCAACCCAAT CCATTCATTGTCAATCCCACCCAGCGGACGTTCACAACCAAGCTGTGTTC TTTAGGATGCTGTCAGAGTAGCAGCAGTAAGCGCCAGCATTAGTGTTTTG CCTCGCTGTTGAAACTAGAAGAAACGAAGAACTTCGAAGATCAGCCTGTT GTATATACGTACGTGCTGCTGCTGCTGTAAGCTGTCAAGTAGCACGAGGA TGAGGATGGGCTCTTGGTCCAGAGCCAACAGCAGAGCGGCTAACAGAGCG CCTAAGGGAGACAGAGGCTCAGCCCGACGCCGCAGCGGTGCAATGGAAAT CGAGGTGTAGGTGTAGGATATCGGAGCACCCACAGCACAGGCCCGGGACC CGGGACACATCCGAAGATCAGAGGGATTTCCACATAACATCGGTATTCTC GGTATTTTGCTGTTGGTATCCCCGGCGACATTTTTGATGTCACGCGCTAG TGGAGATATATGTCCCTGACATGGGCGAGACCCTCCCCCTACCCGCTAAA GTAGATATCTGAGAATCGAGGATAACCATCATTCACTGGACCCTCCTTTT TCGGGAAAAACCATTTTTTTCGGGAAAAGCAGAGAGTGTTGCTTGCTGCA GAAAGTACGCCCAAAAGCACGCACCGACCCATCCTCGTACTACCCCTCGA ACCCAACCCAATCCATTCATTGTCACTCCCACCCAGCGAACGCTCACAAC CCAGCTGTGTCCTTTATAGTCTGATGTTAGAGTAGCAGCAGTAAGCGCCA GTATTAGTTCCAGGAAGAGGACGGGAGAGGGCTGTGGGTGCTCTGCCTAT CGTTAGGGGCCCAATGCTGGTTGTTGTTACTGCATACTCAGTAGTACAGC AGTGTAGTATGAAGTACGATTAGTACTGCTGACTCCACGAGTAGGTGACC ACACACAGCAGTACCAGGACGAGAAGGACACACCACACACAGCAAATGAA CCCTTGAGACTACAGAGTAAGAGAGATGGAGAGGTTTTCGAAAGATATCC CGACGTAACCCAAACGCCAACCCAACGAAACTACCCCAACCCAAGCCACC CTTACAATACCCCACTAACTCAACTCAACCCAACCGACCCAATTCAACCG AACCCAACCATACGGTACCCCCCCGAACCTCCCCCAGAGGGGGGGGCGCA ACCCTACACAACCCAACCCAACCCAACCCTACGATACCCCTCCCAACCCC CCTCAGGGCGCAATCCTACACAACCCAACCCAACCCAACCCGACCATACG GTACCCCCCCCAACCCCCCCCAGAGGAGGGGGCGCAACCCTAGACAACCC AACCCAACCCAACCCACAACCCACAACCCAACCATACGGTACCCCCCCCA ACCTCCCCCCAGAGGGGGGGGCGCAACCCTGCCCAACACAACACAACACA ACCATACGGTACCCCTCCCTACCCAACCAAAATCAACCCAACCCAACCCA ACCATACGGTACCCCCCCCAACCCCCCCCAGAGGGGGGGGCGCAACCCTA CCCAACCCAACCCAACACCCCAACCCCCCTCGGGTAGGGGAAATCCTTCT GTGACCCCGGCTGAACCATCGACACATTGACATATTCGAAATATTTCGAA GTACTCCGTTCAATCATATAAATATAATGTATCAGACCAACGGGGATGAG ACAGTGATTGGACAAGGCGTGCGGTAAAAGGCCTTCCCCTGCTGTACTGG CACTGCTTGAGAAACCGTGGCAGCGCGCTGTGCCATGCAGCCTTGCTTGG ATCAAACCCCTTTCATGAACTCAGCGGCAGCACGTTAAGGCCAGGACTAC ACTATGGTAGTACGAATACTTCAATGTTTCTCCATAAATATTTGCATTAC TCGACGTTAAATAGAAGAAATGCCACGGCTTTGCTTCATTCTATCATGCA GTTGGTTAATTTTTGGTTTCGACAGAGAATACCACAAAAAAGTGATGCCA GTTCTATATACCAAAACTTGTCTTGTTGATCCTGATGACTTCAGGGGAGC TGCAACGGTACTTTGATCTGATGAGTTGCAGAAGCACAGCAGGTACGAGT AGAGGTAATAGTCTCTGTGTTCGTTGCTAAGTCTACTCAACACCCTCGTC TAGAGGAAGGAGAACACCTCGATGTCTTTGTCAGAAAAACAAGAAAACGC GCTGGCTCTCACTGCTTGGAGTCTTTGACGACTCCTCCCGGTCCCCTTGG CAAGAAGTTGGCGCTGCAGCAGTACGAACATACCTCCCTCTCGCCCGGAG TTGTTCTCACCTCTGCGTCCTAATCTACAATCTACAATCTATCGTATCTA CCAACAAAACGACCCCGTGTGTATTAACGGCTGTTCGACTCTCGGGGGCC AGGGAGCGAGCCGTGGGCTGGGTGCCGCAATCGCCAAGGACCTCGCCAGC ACCGGCAGCAGCGTGATCGTGAACTACGCGGCATCGTCCGGGGCGGCGGA AGAGGTGCGGCGGGTGGACTTTGAATATAATACGTGAGGTAGACGAACAG CGTTATTCAGCGAGTAGACTTTGCGTAGCACCTACAAAATTGTGTGCGAG CAGAGGCGACTGCTTCTTGGGTTCAGTGTGTGTTTGTTTTTGACTTTCAA CCAATAGGTCTACGTACTGTAGTGGAGTTGAGTAGAGTTGAGTTGCCAAA TGTGACTAAATACGCGGCGGTGCATCAGGGGGAGAGGAAGGGGTAGGAAT ACTCATGGTGGTGTTTGAGGCGCTCTTTAAGTGTGCTGGCGGCTGATCGT GATATTTGTCATGTAATCCCGTGCGACCTCCCCCCCCCCTGCACTCGCTT TCGTTGTGCTGCGGTGCGCTGCGGTGCGCTGTGGTGCGCTGTGCTGCCGA ACGTTCTTGTGGTGGGTCGATCATGCCAAGGTCGTGAAAGCCATCCAGGA GGCCGGGGGAAAAGCCGCAGCCGTGAAGGCGGATGTCTCGAAGCTGGACG AGGTGACGGCGCTCTTCAAGGACGCCGCGGCGGCTTTCCCTGACGAGAAG ATCGAGGTGGGGGTGTGAATAGCGAAACACGACTGCTGTACGTGACGCGA ATGCCTACTACGCATGTTTTTAGTCACGTGTTTCGTTGCACTCCAGTGAC AAAAACTTCGGCCTTTGGGTGAGCAGCCGGGGGAAGTAAATATTGTCGTT GTTAGACTTATTTAAAGAAGAATCGACGCATGATGTATCAGCCCGCTTGT TTCGTGATGTGAAAGCCTTTTGGTGCACACCATTTTTAAGTATGATAACT CGACTAGGACTGGTTGCGGGCGGCACATTGTCTCGTAGGGGCACACGTCA GTCCATAGACCGACCATGGTATCCAGAGAAAAGACACTTAAGAACACACC AAGCTGATTATCGGGTGCGATATCATGCCGCAGCAGCAGAGAGGCCTCCG AACCTTCAAAAATACGAAAAAACGAAGGGGGGTGCATTCGTTCGTGACTT TGTAAAAAAGCACACGCGGTTGTGTCACAGAAGGGACTGAGTGAACAGCA GTGAGATTCGACCAAGGCAAACACTCCGTACATCTCTGAACGAGGGTGAG CCCAAACGCCTACCGCCATACCGTTGTGTACGGGTTTTGGTATGGGTGAA ACATGGTTGTACTGCTGTAGTAGGAATTTACGTCGCTGCCTCTGAAGGTC AGCAAGCCCCGCCGTGTCCTCGACTCCACCCGATCGCAGGTGGTCGTCAA CAACGCCGGCATCACGCGGGACACGCTGGCCATGCGGATGAAGCCCGACC AGTGGCAGTCGGTGAGTTGCGTGCGCGAGACGGGCGTCTCGCGCACCAGT CGATTTGAACAAGGTCTTGTTTGCTGGATATGTGCATCAACTCCCGTGAA TGTATTGGAGGTGACTGCTGTCTTACTTGTACCCAGTGCACCGACAGGTC CGTACGGTATTTCAAGTTATTTCCATTATTTTTTATTATTTTTTATTAAT TCTATGGAGTTGTCCTTTTTACCCACTCTGTTTCTTTAATCTTTGAAGCT CTTATCCTTGTACTTCGAAGTACTCCGGAGTTTTTGTTATTTCAACCTCA GAAGCTAATAAATGATATAGCAATTGGCGTCGAGTCACTTCTAAAATAAA AAAAATAACCCCCTACCCGGTAGCAAATTACACAGGAGTAGGACGCTAGG TAAAAGTCATTTAGCGTTGTTCGTATTCTGCGGAATATTCATGTGCTTTC GATGGTCTTCGTGTGGTGTGTGATTATATTTCGCATGGAGAGGCATGTGT GCCGGATCAGTAGCGAGGCTCGTATCCCATTATTGCTCGTGCCTCAAGCT GAAATTTTGCTGCTCTGCTGGAGTGGGATGTGCGATTATGTTCTGCTCTG CAAGCAAGACAGGCTCGAAGTACGGAGTTTATCCACTAATTTGAGTCCGC GCGGCACGCAAGGTGCGGAGGCCACCTATCTTGTTCTTCATCGCGGGGAC CCACAAATAATGCCACGAGTTGCACCCCGTGGTGGATCCCTTTCTTTTTT TCGTCTGTTACTCTCCCTGCCCGCTCTCCCGCCCGTCCGCGCGTTTTGAT TCTGTAGGTGATCGACCTGAACCTTAGCGGAGTATTCTACGTCTCTCAGG CGGCGTGCAAGCTCATGCTCAAGCAGCGAAAGGGCCGCATCATCAACATT TCGTCAATCGTGGGCCTCATCGGCAACCCCGGACAAGCCAACTACGCGGC CGCGAAGGTGTGAGAGAAGAAGGGGAGAAAGCGGGGGGGGGGGTGGGGGG GGGGCAGATAACGGTGAAGAGAGCTAGGTGGAAATGGGAAGAGGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAATGCTGGGCAGGGAAAGTGTTGACAAGCCCATGGCAAGGTACTGC TCAATACCTTTCGGTTGCACACATGTTTGCGGTCGCTCCACTCGCCTCTC CATCGCTCAAAACAGAAACCCCGAATCCTCCAGCCCGGGTTGTGTCCAAG GGGGGCTCGACCAAGCACATGATCGTTCGGCACTATCGTATCATAAATTC AGACGGAAAAGAGCGAAAAAGCAACATCCGTTGCTTGTTCACTTCCTCCT GCCCGTACCTGCATTCCTCTCCCTTGCGACCCCGTCTCTCTTCCCTCACG CACGCGTGAAAAGGCCGGCGTGATCGGCATGACTATGTCCATGGCGAGGG AGTTCGCCGGGCGAGGCGTGACCGTCAACGCGGTGTGCCCCGGCTTCATC GAGAGCGATATGACGGCCGAGCTCGACCAGGAGGCCATCAAGAAGATGAT TCCCTTGGGCAGGCTCGGAAAGCCGGAGGAGATCGCGGGCATGGTGAAGT GAGTTTTCTGTTCTTGATTCGAACTTCGGAGTCTAAAAGTGCCAGCCAGT AACTGAAGGTGTTGAAATACGCTTTGTATACGTATAACAACACCACCTTG TTTTTCTCCGGTGCTGACGATTGTTTCTTTTATTCGTTGCAAGCAAACAT CTTGCATTTGTGTTTTTATTTCTGAACGGCCGGTAAGGTTGGGAGGCGTC GGACAGCAAGGGGGTGGTCACGCGAGTTTTACAGTCATTCCTATGTATAC GAAGTATACGTACTGTTGCAATGGACTGAAAAAATCACGTGTATCATACC ACCCCCCTACTTCCCGACGCTTGCACACTCTACCCATCACAAACATATAT AAATGGTATGTGCTGACAAGAAAAAAACAATCGTCATAACATGGCGTCTT CTGTCAGACCCGGATTTCTTGGTACTGGCAGCGGTCCATAGCGTGTGGTT GTGGCCACGGCCTGCTTTGTTTTTTTTGTCTTGTCAGCGATGGCACAGTA TTCGATGCGCGAATGTTCGAGACGCAAGGTAGTCCCTTGTTCTTGTGTAC TGCGCGGATGTAGGGAGGCTGCTAAGGTGAGGGTGGGTGGGTAGCCTCTT TTGAACCCTTGCGTATGATTTTCCGATTGCACGGGTACAATCCATGTCCA CAAGCTCTCTCTCTCTCTCTCTCTTGCGCTTCGTGTTGGTGCAGCTCGCA TAGCCAGTCCCTCACCAACCGCTTCGGGTTGCGGTTCGCTTGCGTGTCCG CCACTGCTGTCTCTACTGCTAAGGTTCATTGCCACGGAGGACAGCGCAGC GTACATCACCGGCCAGACCTTCACCGTGGACGGCGGCATGGCCATCGGTG CATGAGCTCGTATTCGAAAATAGCAGCTCCCAATCGAGGGTGACCGAAGA GCGCTCTCAAAGGACAACTGGCGGGGCCGTGCAAGATCGATACCAACGCT TGCTATCGAAGCCCAAGTTGTGTTTTTAGCGCCAGTAGTGGAGATGAGGG AGTGCGCCCTTTTTTGGATGTGATTTTCGATCAGACCCCCCCCCTTTTTT TTAATCGATACACTCCAGGTGGTGTCCGAAAGTTTAGTGATTTATTTTAT TTTGTCAGTCATCTTTACCTCTTTTAACCTTTGCGATAGCCGCGACGTCC CACGGAATTATATCATATGGAATACGTCCAGCTACACGCCGCCGCGACAG ACGGGTCCCCGTCCACGCCGAAGGGACGCCAGGGCTAAATAAAGGTCGGT CGATTACCGCGCGAAGTAGATTCCTCTTTTTAACATGTAGCACGCCTCCG ATACTTTTTCTCTCTGTCAATACTACTGTAGTTTGCAGTGTGATCTTTCG GGGTCCGTTTCATAATACTGTCGGATTTCCCTCTTAATTGTGCGCATGTT TGTAGCCGGTCGCCCGATACTTCGGTAGGTAACCTCGGAACCTACGGAAA TTTTAAACTCGCACGACGTGAAATTTCAAAATTTTAAACGTGCGAGTTTT CATTTTCAAACTCGTTTTTCTCTCCATTTCGACTCGAAATGACGTGGGAA AGGGATAGTGTGGCACTTCTCGCGATAAAAGTAAAAGATGAGCGCACCGT AGAATAAACGAAGGTTGAGAAGAAAAAAAAACCCTGCGTTGACCTCCCTC TTGTGTGACCTCCGGCTGCTGCGCCCAACTCATACCGAAAGGTGTGGACG GCGTCCAGAATAAAGAATAAATGGGATGAGACGACACAAAACACTGTGTA GCCGTTTTCATGTAGGTATAGACGGTGCCTACGGAGAGCGTCCGCTATCA CTTCACTCAGAAGTACGGACACCGGAAGGTACGGTGGGCGGGACGAGCGG ATTTTGATATGGAGACAATATACACACGACAAGAAACACTTATGTTGGCC ACGACCGGGGTCCAATCTCCGCCACGCACAGTTTTTCCTTCACATTTGAA TCTACAAGAGAAAATGTAAACTGCGAGGAAAAATACGTTTAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig76:420907..430398+

>mRNA_P-littoralis_Contig76.155.1 ID=mRNA_P-littoralis_Contig76.155.1|Name=mRNA_P-littoralis_Contig76.155.1|organism=Pylaiella littoralis U1_48|type=CDS|length=918bp|location=Sequence derived from alignment at P-littoralis_Contig76:420907..430398+ (Pylaiella littoralis U1_48)
ATGAAGCTGACCAACCTCTCGATCGCCTGCATGGCTGGGTACGCTCGGGC
GTTCATTGCTCCGTCTGTCTCCTTGAGCAGCAGATTTGTGCAGCCTACTG
AGCGCACAGCTCTGTCGACGTTGGCGATCAGCAGCAGCAGCAGCAGCAGC
AGCAGCACCCCTTCCTCCCTGCGTCCACGGATGAGCATTGCCATTGTCAC
GGGAGCGAGCCGTGGGCTGGGTGCCGCAATCGCCAAGGACCTCGCCAGCA
CCGGCAGCAGCGTGATCGTGAACTACGCGGCATCGTCCGGGGCGGCGGAA
GAGGTCGTGAAAGCCATCCAGGAGGCCGGGGGAAAAGCCGCAGCCGTGAA
GGCGGATGTCTCGAAGCTGGACGAGGTGACGGCGCTCTTCAAGGACGCCG
CGGCGGCTTTCCCTGACGAGAAGATCGAGGTGGTCGTCAACAACGCCGGC
ATCACGCGGGACACGCTGGCCATGCGGATGAAGCCCGACCAGTGGCAGTC
GGTGATCGACCTGAACCTTAGCGGAGTATTCTACGTCTCTCAGGCGGCGT
GCAAGCTCATGCTCAAGCAGCGAAAGGGCCGCATCATCAACATTTCGTCA
ATCGTGGGCCTCATCGGCAACCCCGGACAAGCCAACTACGCGGCCGCGAA
GGCCGGCGTGATCGGCATGACTATGTCCATGGCGAGGGAGTTCGCCGGGC
GAGGCGTGACCGTCAACGCGGTGTGCCCCGGCTTCATCGAGAGCGATATG
ACGGCCGAGCTCGACCAGGAGGCCATCAAGAAGATGATTCCCTTGGGCAG
GCTCGGAAAGCCGGAGGAGATCGCGGGCATGGTGAAGTTCATTGCCACGG
AGGACAGCGCAGCGTACATCACCGGCCAGACCTTCACCGTGGACGGCGGC
ATGGCCATCGGTGCATGA
back to top