mRNA_P-littoralis_Contig76.149.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig76.149.1
Unique NamemRNA_P-littoralis_Contig76.149.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: D7FQ80_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ80_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.290e-101
Identity = 187/347 (53.89%), Postives = 207/347 (59.65%), Query Frame = 1
Query:    1 AETLLQQRVAGPAVLPPPGANGTGKGDKKRLELDLVSKRVYQETILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMSGRCAVACNSNIRIYRYAVGQRFGKHIDESVEDENGHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDT---------------------------------------------------------------ELSMCF----GNCGGKVAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 840
            +ETL   RV GP VLP       GKG+   ++L+L SKR+YQ+TILSI+ LLSPRECAAWIR+GE +GFERSFHRQTSEMAHRDNGRITLHS +VAAA+FARVG FVPA M GR  +ACNSNIRIYRYAVGQRFGKHIDESV+DENG  SQWTVLIYLNG                       K G  +     AG+        GE+GAPLRGGETVFYKA                                                                   LS C     GN G KVAA+FSPRQG+CLVHGHG+QCLLHEGAAVTSGVKYLLRTDVMY
Sbjct:   18 SETLRHTRVYGPLVLP------DGKGENDAVDLELTSKRIYQDTILSIDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXX-----XXXXXXXXXXXXSKKKGRSDXXXTFAGA--------GEEGAPLRGGETVFYKAAADALCCVPLFPIGTRGFKQILEESVSVHSPTLPLTQVPCSLFPTCVLLPLNPSPLSAVLRALTFGSLSSCLLPFKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 345          
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: A0A6H5KGN2_9PHAE (P4Hc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN2_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 3.880e-96
Identity = 160/250 (64.00%), Postives = 178/250 (71.20%), Query Frame = 1
Query:   91 LELDLVSKRVYQETILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMSGRCAVACNSNIRIYRYAVGQRFGKHIDESVEDENGHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGKVAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 840
            + +D++     +    SI+ LLSPRECAAWIR+GE +GFERSFHRQTSEMAHRDNGRITLHS +VAAA+FARVG FVPA M GR  +ACNSNIRIYRYAVGQRFGKHIDESV+DENG  SQWTVLIYLNG                       KG +     +          G GE+GAPLRGGETVFYK          GN G KVAA+FSPRQG+CLVHGHG+QCLLHEGAAVTSGVKYLLRTDVMY
Sbjct:    6 IRVDVIHNNHNKRLATSIDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXX-----XXXXXXXXXXXXKKKGRSDXXXAF---------AGAGEEGAPLRGGETVFYK----------GNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 231          
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: A0A836CHZ3_9STRA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ3_9STRA)

HSP 1 Score: 223 bits (568), Expect = 7.510e-70
Identity = 126/243 (51.85%), Postives = 152/243 (62.55%), Query Frame = 1
Query:  118 VYQETILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMS-GRCAVACNSNIRIYRYAVGQRFGKHIDESVEDEN-GHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGKVAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 840
            VYQ+ I  I+  L+P EC AWI  GE+ GFE +FH  T E+AHRDNGR+ +HS ++AAAI+ R+ PFVPAE+S GR A  CN+NIR+YRY VGQRFGKHIDESV D   G  S++T+L+YLNG G    G                                       E+G PL GGET+FYK          G+ GGK+AA+ +P  GSCLVHGHG +CLLHEGA VTSGVKYLLRTDVMY
Sbjct:    1 VYQDLIFRIDGFLTPAECGAWIDWGEETGFENTFHTATREIAHRDNGRLQVHSPDIAAAIWQRIQPFVPAELSRGRKAAGCNANIRLYRYCVGQRFGKHIDESVLDPTTGATSEYTLLLYLNGAGSPVRG---------------------------------------EEG-PLAGGETLFYK----------GSYGGKLAASVTPIAGSCLVHGHGARCLLHEGALVTSGVKYLLRTDVMY 193          
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: A0A7S2UX31_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX31_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.230e-63
Identity = 116/258 (44.96%), Postives = 156/258 (60.47%), Query Frame = 1
Query:   67 TGKGDKKRLELDLVSKRVYQETILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMSGRCAVACNSNIRIYRYAVGQRFGKHIDESVEDENGHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGKVAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 840
            T K ++K + L L ++ +Y++ I  I +  +P+EC AWIR GE+ GFE  FH  T E AHRDNGR+   S  VA  ++ R+  FVP  M G+ A  C++NIR+Y+Y  GQRFGKHID S  D++G  S +TVL+YL+GG ++G  +     + GGA LD  +    E                     PL+GG TVFY+          G+ G KVAA+ +P QGSCL+HGHG +CL+HEGA V  GVKY+LRTDVMY
Sbjct:   78 TSKNNQKMVSLSLRTEGIYRDLIFGIPNFFTPQECRAWIRFGENNGFELQFHNATQEYAHRDNGRLQWESEAVAGVLWERLRAFVPTHMGGKEASGCSNNIRLYKYVPGQRFGKHIDGSNVDQHGRQSYYTVLVYLSGGEDQGRPSPAEEEAKGGAPLDGLEESLQE---------------------PLQGGHTVFYR----------GSYGDKVAASVAPLQGSCLLHGHGDRCLVHEGAEVKRGVKYVLRTDVMY 304          
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: A0A0L0G5Z2_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5Z2_9EUKA)

HSP 1 Score: 196 bits (498), Expect = 1.920e-58
Identity = 117/283 (41.34%), Postives = 155/283 (54.77%), Query Frame = 1
Query:    4 ETLLQQRVAG---PAVLPPPGANGTGKGDKKRLELDLVSKRVYQETILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMSGRCAVACNSNIRIYRYAVGQRFGKHIDESVEDENGHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGKVAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMYA 843
            +TL Q  V     P ++P P      +G  K ++L++  + +Y++TI ++ + LS  ECAAWI  GE +GFE SF +Q  E AHRDNGRI++ S  +A A F R+ P +P +   R   +CN+NIR+Y+Y  GQRFG+H+DESV D NG  S +TVL+YLNG  E  +       S  GA L+                              L GGET FY+             G  +A A  P++G  L+HGHG QCL HEGA V  GVKYLLRTDVMYA
Sbjct:   17 QTLKQTTVVFVKCPPLIPEP------RGYSKPVQLNMDKEYLYKDTIYTLTNFLSDSECAAWIEFGEREGFEASFQKQNRECAHRDNGRISIESESIAQAFFLRLNPSLPEKYGTRQLNSCNTNIRLYKYGPGQRFGRHVDESVVDSNGRKSVYTVLVYLNGHNE--DNTSETPRSGDGADLEAIN--------------------------TLVGGETKFYRRHH----------GSAIACAVRPKKGQALLHGHGAQCLTHEGAEVKEGVKYLLRTDVMYA 255          
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: R1DNF6_EMIHU (P4Hc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNF6_EMIHU)

HSP 1 Score: 165 bits (417), Expect = 9.620e-47
Identity = 94/240 (39.17%), Postives = 129/240 (53.75%), Query Frame = 1
Query:  130 TILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMSGRCAVAC--NSNIRIYRYAVGQRFGKHIDESVEDENGHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGKVAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMYA 843
            ++LSI + LSP ECAAW+  GE  GFE+  H QT  +AHRDNGR+ + S  +AAA+++R+ P +PAE + R AVAC  N NIR+YRY  GQRFG+H+D+S     G  ++WT+L+YL+GG                                           PG++   + GGET FY              GG+ +    P  GS L+H HG +CL HE   V  GVKY+LR+DV++A
Sbjct:   13 SMLSIPAFLSPAECAAWVSWGETSGFEQEKHAQTRWIAHRDNGRLAVQSESIAAALWSRLAPLMPAESTRRGAVACGCNPNIRLYRYTPGQRFGQHVDQSNALPGGEQTEWTMLVYLSGG-------------------------------------------PGQE---VVGGETAFYD-------------GGRRSVVVDPLAGSALLHAHGERCLTHEALEVRRGVKYVLRSDVVFA 193          
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: A0A2R5GIH8_9STRA (Tetraacyldisaccharide 4'-kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIH8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 5.220e-44
Identity = 104/250 (41.60%), Postives = 130/250 (52.00%), Query Frame = 1
Query:   91 LELDLVSKRVYQETILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMSGRCAVACNSNIRIYRYAVGQRFGKHIDES-VEDENGHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGKVAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVM 837
            ++LDL    V ++ I ++   LSP ECAAWI  GE +GF  +    ++  A RDNGRI++H  EVAA IF R+   VPAE+ GR AV C+ NIR+YRYA GQRFGKHIDES  E +    S++T+L YLN  G                                                 L GGETVFY           GN G K A    P QG  L+H HG +CL+HEGA V +GVKYLLR+DV+
Sbjct:  105 VKLDLERFAVLRDLIFAVPRCLSPEECAAWIAWGEKRGFASAKQASSAGFAFRDNGRISVHDPEVAAIIFQRLRGVVPAEIDGRKAVGCSPNIRLYRYATGQRFGKHIDESNFEQDLDAWSEFTLLFYLNDEG-------------------------------------------------LDGGETVFYS----------GNTGTKEALRVPPAQGLALLHWHGDRCLVHEGANVRAGVKYLLRSDVL 295          
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: A0A6A3T0P6_9STRA (Fe2OG dioxygenase domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3T0P6_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.240e-37
Identity = 89/245 (36.33%), Postives = 119/245 (48.57%), Query Frame = 1
Query:  112 KRVYQETILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMSGRCAVACNSNIRIYRYAVGQRFGKHIDES-VEDENGHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGKVAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMYA 843
            + +++E I ++ S LS  EC       + +GFER   R T E A RDN R+ L     A  ++ R+ P VP+E  G  AV  N  IR YRYA GQRFG H+D+S V+   G+HS++TVL+YLN   +                                              + L GG+T+FY                +V  + +P  G+ LVHGHG +CLLHEGA VT G KYLLRTDVMY+
Sbjct:   57 RHLHEELIYAVPSFLSRAECQRVRSFADQEGFERVTQRATREFAFRDNDRLLLRLPAFAELLWQRLQPHVPSEYEGMHAVGLNPAIRFYRYAAGQRFGCHVDQSDVDRVTGYHSRFTVLVYLNDSKD----------------------------------------------SDLLGGDTIFYANEAGAKEE-------QVVLSVAPETGAALVHGHGDRCLLHEGALVTRGAKYLLRTDVMYS 248          
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: H3GLV7_PHYRM (Fe2OG dioxygenase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLV7_PHYRM)

HSP 1 Score: 138 bits (348), Expect = 4.250e-36
Identity = 93/256 (36.33%), Postives = 119/256 (46.48%), Query Frame = 1
Query:   91 LELDLVSKRVYQETILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMSGRCAVACNSNIRIYRYAVGQRFGKHIDES-VEDENGHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGK----VAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMYA 843
            L   L  K ++ E I ++   LS  EC       + +GFER   R T + A RDN R+ L     A  ++ R+ P VP E  G  AV  N  IR YRYA GQRFG H+D+S V+   G+HS++TVL+YLN   +                                              + L GG T+FY           GN  G     V  + +P  GS LVHGHG +CLLHEGA V+ G KYLLRTDVMY+
Sbjct:   46 LRSSLRVKHLHDELIYAVPCFLSRAECQRVRSFADKEGFERVTQRATRDFAFRDNDRLLLRLPAFAELLWKRLEPHVPVEYEGMRAVGLNPAIRFYRYAAGQRFGCHVDQSDVDRVTGYHSRFTVLVYLNDSAD----------------------------------------------SDLLGGNTIFY-----------GNEAGAKQEHVVLSVAPETGSALVHGHGDRCLLHEGALVSRGAKYLLRTDVMYS 244          
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Match: A0A662YGH3_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGH3_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.570e-36
Identity = 89/245 (36.33%), Postives = 116/245 (47.35%), Query Frame = 1
Query:  112 KRVYQETILSIESLLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIFARVGPFVPAEMSGRCAVACNSNIRIYRYAVGQRFGKHIDESVEDE-NGHHSQWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAGGGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGKVAAAFSPRQGSCLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMYA 843
            K ++ + I ++ S LS  EC       E +GFER   R T + A RDNGR+ L     A  ++ R+ P VP E  G  A   N  IR YRYA GQ+FG H+D+S  D   G HS++TVL+YLN   +                                              + L GG T+FY A +            +V  + +P  G+ LVHGHG +CLLHEGA VT G KYLLRTDVMY+
Sbjct:   75 KDLHDQLIFAVPSFLSRVECQRVRSFAEQEGFERVTQRATRDFAFRDNGRLLLRLPAFAELLWLRLKPHVPVEYEGMFAAGLNPAIRFYRYASGQKFGCHVDQSDVDRITGFHSRFTVLVYLNDASD----------------------------------------------SDLEGGNTIFY-ANEAGAKE-------EVVLSVAPETGAALVHGHGDRCLLHEGALVTRGAKYLLRTDVMYS 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ80_ECTSI1.290e-10153.89P4Hc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KGN2_9PHAE3.880e-9664.00P4Hc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CHZ3_9STRA7.510e-7051.85Fe2OG dioxygenase domain-containing protein (Fragm... [more]
A0A7S2UX31_9STRA1.230e-6344.96Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0L0G5Z2_9EUKA1.920e-5841.34Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
R1DNF6_EMIHU9.620e-4739.17P4Hc domain-containing protein n=2 Tax=Emiliania h... [more]
A0A2R5GIH8_9STRA5.220e-4441.60Tetraacyldisaccharide 4'-kinase n=1 Tax=Hondaea fe... [more]
A0A6A3T0P6_9STRA2.240e-3736.33Fe2OG dioxygenase domain-containing protein n=6 Ta... [more]
H3GLV7_PHYRM4.250e-3636.33Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A662YGH3_9STRA5.570e-3636.33Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:402333..406723 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FQ80
PFAMs2OG-FeII_Oxy_3
Model size846
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.11e-102
EggNOG OGs28IQ0@1|root,2QR14@2759|Eukaryota
Ec32 ortholog descriptionProlyl 4-hydroxylase, alpha subunit
Ec32 orthologEc-01_007120.1
DescriptionProlyl 4-hydroxylase alpha subunit homologues.
Cds size846
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791569.334953-CDS-P-littoralis_Contig76:402332..4024721680791569.334953-CDS-P-littoralis_Contig76:402332..402472Pylaiella littoralis U1_48CDSP-littoralis_Contig76 402333..402472 +
1680791569.3506467-CDS-P-littoralis_Contig76:403087..4032931680791569.3506467-CDS-P-littoralis_Contig76:403087..403293Pylaiella littoralis U1_48CDSP-littoralis_Contig76 403088..403293 +
1680791569.3622932-CDS-P-littoralis_Contig76:405458..4058051680791569.3622932-CDS-P-littoralis_Contig76:405458..405805Pylaiella littoralis U1_48CDSP-littoralis_Contig76 405459..405805 +
1680791569.3793895-CDS-P-littoralis_Contig76:406570..4067231680791569.3793895-CDS-P-littoralis_Contig76:406570..406723Pylaiella littoralis U1_48CDSP-littoralis_Contig76 406571..406723 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.149.1prot_P-littoralis_Contig76.149.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig76 402333..406723 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig76.149.1

>prot_P-littoralis_Contig76.149.1 ID=prot_P-littoralis_Contig76.149.1|Name=mRNA_P-littoralis_Contig76.149.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=282bp
AETLLQQRVAGPAVLPPPGANGTGKGDKKRLELDLVSKRVYQETILSIES
LLSPRECAAWIRHGEDKGFERSFHRQTSEMAHRDNGRITLHSVEVAAAIF
ARVGPFVPAEMSGRCAVACNSNIRIYRYAVGQRFGKHIDESVEDENGHHS
QWTVLIYLNGGGERGEGAGTASASAGGALLDMSKGGAGEVAGWSAGSAAG
GGVGPGEDGAPLRGGETVFYKARDTELSMCFGNCGGKVAAAFSPRQGSCL
VHGHGRQCLLHEGAAVTSGVKYLLRTDVMYA*
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mRNA from alignment at P-littoralis_Contig76:402333..406723+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig76.149.1 ID=mRNA_P-littoralis_Contig76.149.1|Name=mRNA_P-littoralis_Contig76.149.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4391bp|location=Sequence derived from alignment at P-littoralis_Contig76:402333..406723+ (Pylaiella littoralis U1_48)
GCCGAAACTCTCCTGCAGCAGCGAGTGGCAGGCCCGGCGGTATTGCCGCC TCCGGGTGCGAATGGAACGGGAAAGGGCGACAAAAAGAGGCTCGAGCTCG ATTTAGTATCGAAGCGAGTTTACCAAGAGACCATTCTAAGGTGCGGTCAT CAATGCTTGCATGCCAGAACAGCAACTGTTGTACAGGCGACGGAAGCAAG TTCGGTTGCCTTTTTCGGGGGAAGGAGGTACCACAGGTATCATTTTTACT TCACCAGTGCCGAGGTTTTGTGTTTTCTGTTGCGGCAGTGGTGAGAGTAA CTTCAAGTTCAGAGCATATGATACGACTGAAACCACACGAAATACTGCGG AATGTCAAGCGCGACCATATATTTCTCCCTGCTGCGTATGTAGATAGCCA GGAGCTGGCTCAGAGAAGCCGTGGGGTAACGGCAATGGAGTCAACCAAGG TGTGAAGTACGACTCTTCCACACACGTGCCTCCTTATCCTTCAATATCAT AACTCAAAACATGAAACGTATCTTTGCCCTCACACAGTATACATAACATA CTGCTGAAGTATGTTCTCCACCTGCCTCGCGCCTTCTTGCGTCTGACGAC ACGTCGCGTATTTGCGACAACCATCTTGCAGCACGAGAGTTATTTCATAC CCAACCCACTGCTACAGGGCACCGCTGTTGTAGCAATTCCTCATTTGCCC CACCCGTCGTGCGTCTCTTCATGTCTGACCATTTTTTGCGGCAACCACTT TTTAGTATCGAGAGCCTGCTTAGCCCCCGGGAGTGCGCAGCGTGGATACG GCACGGCGAGGATAAGGGCTTCGAGCGGAGCTTCCACAGGCAGACGTCGG AGATGGCCCACCGCGACAACGGAAGGATAACCCTGCACAGCGTTGAAGTT GCTGCCGCCATCTTCGCGAGAGTGGGACCCTTCGTCCCCGCCGAGATGAG TGGAAGGTGCGGTGTACAGCTTCAGTATCGTACAGTTTAACAAACTGCGG ACCGTTGCTGGAGGTTGCGTAAGAATATCACATTTTTCATAAGGAAGCAC ACCCCCTACGAAAAATAATTCGAAGTACGGAATACCGCCCCGTGTGATAT TTGGTTTAGCCCCCCCCCAAAAAAACGACATTTATCGCACGGGTGACATA AGATACCACACCTCTTTCCCCCTCAAATTTAAGCCGCATGATCATCACGG GGCCCCTGGTAATGACACGTGAGATTCAAAAGTGTGTGATGTGTGACCAA ACAGACGCAATTTGTTCCAAATATTAGGTGGTCGCACACAGCGAGAAAAT TGGATGACACGGATGTTGTACTGCTGCCATGTGATGCTTCGAAGTGATAG TATAACGTTCGCCTGCATCATCGCTGTCCTTTGATGCCAACAAGATATTT ACGAAAGGTGCAGTCTTGTCTATGAAGAGTCATCACCCCTTATTTTCGAA GCCATGTTCAAAGCCGTCCTTCTGTGCGTGTATGTTTTCCTTCGCAGAAT GCCGGCCAGCAGAGATAGCATACCCCCTTGTCATTGCACCTCTTTCAGGA GGGAGTGTGGGGGCAGTAAATATTTACCACCTAAGATATCACCCTCCTAT ATCACCTCGCACCCTTGTGTCACACCCCGTGTAGTTGGGCTCCTTTCAGC TGCACTTAAACACCCAGATGATAAAAGATACCACACCCCTACAACACGTC TGAAACCGTGAAAAGGAGCTGTTGGTTGTGCGCCATCGGTGGGCCAAACT CATCCTTTTCAGGGGCAGGGATACCTCTTTACCACGGTATCATAAACTGG CACCACGGGGTTGCGTGGGAAGACCCTTACTTTTGTATTCTACGAGGATG CTCAACAACTCCTTCCTATAATGTCGTGGCTGAGATTCCCGGTGTTTGCG TTGGTGACGCACACTCCCGGTTCCTCGGTGTTCCCCGATTCAGTCTCCTC GTCAGCCTGCTCTTCGCTCTCTCGGCGTCCATTCCTCCTGGCGAAGGTGA TTCCTTCCACAGCAGCATCCTCTCGACGTGACTGCACTTGGTAGCACACG CGGTGGCCACCTCCCCTCCCCTGTTTAACCTCTTCCTGCCGTGCGTGCGA GTGGCCAACTTGGGCTGCCTCAGGGTACCGCGGGACCTTTGTTGCACCCC CTGTGCCACCGCGAGTCCCGCCGCTTGCTTCTAGTCGAATCGTCTCAGCA GGAACACAACTAGCAGCTGCTCGGTGTTTGATTTCGGCCCAAATCATCCC CGCCTCTTGGTTGCTCACCCGACCTGCCACTTCTGACTTCTAAGTCATGC TCATCGGAAACTGTGAGGCACCCCCCTTATTTCCGTGATGCTTGTCTCGA CTCCGTTGTGCCTCCTTCGCCGCCAACACGGACGGGAGCTGTCGCCCATC AAAGCTCTCCTCGTCTTCCTCTGGTGGTATGACAACGTCGAAAGAGTTCC AGCGTCGTCGCCACCTGTGCTTGTTTTCTCGGCCGTGACTTTCTCCGGCC AACACACGCGCCCCGTCAGAGCACGCCTCGCCCTACCCGGCCGATAGCCC ACGACGGCGGCCGTCCACCCCTGTCGAGGGCGTTTCGCTCGCTTCATGTG CTGGCGAACTCTTAGCGTTTCGAAGGGCATCTCCCATTCGTCAGGTACTG ATCGAAACGCACCACCCCCCTTAAAAATGGACGCCACTGCTGTCATTTTG TTGCCGTTGAAACGCAGCGCAGGATGAGTCCGAACGGTAAGCATTGATAG TCATCCGCACCCGCACCTTGAACGGCCAGGCTCTGTAGCGCGTAAGCTCT TGCCTTAGTCGAGTGTACAAGTATGTAAATGCAAATGTTCGGTGTTGAGA AGCACGATTTGCCTATGGTGTGGAAGAATCAGGGTCAAGAAACCCGTGCG ACACAGAAGCCAAAACAAAACGCAGAAGGAACCAAAGAAGCTGAAACTTG GGGTTACTCGCGTCGCTGCTCGGCACGAAATCTTGCGCTGTCTGAGTCTT GTTGACGAGAGGACCACAGAAAAAGAAGAGCTGGAGAAACTCACGGATAT ACTTGGACTCTTTGAGCTAATTGATTACCCTTTCAATACTGTTTATCGAT CTCGGCCTTTGCCACGCACAGAACAGCGGTGGCGTGCAATTCCAACATCC GCATCTACCGGTACGCCGTCGGCCAAAGGTTCGGCAAGCACATCGACGAG AGCGTCGAGGATGAAAACGGACACCACAGCCAGTGGACGGTGTTGATTTA CTTGAACGGAGGAGGGGAAAGAGGAGAGGGAGCAGGGACGGCATCAGCAT CAGCAGGGGGGGCATTGCTGGACATGAGTAAGGGTGGTGCGGGGGAAGTC GCCGGATGGTCCGCAGGGTCTGCGGCTGGCGGCGGTGTCGGTCCTGGGGA GGACGGGGCTCCTCTCCGAGGAGGAGAAACTGTATTTTACAAGGCGAGAG ATACAGAGCTTTCAATGTGCTTTGTGTTGGACGTATGATATGTATATGCA GCTACATGGACTCTTCGTATTGTGCGCTGTTGTGGCATGAGGTTTTTGCG GCTGTTGTCCTGTGTTTGTACCGCTCAGCATCTTCAGGTGCCGCGTACTG ACTTCTTCCAGCCGTTGTGTGGGCACTTTTCCGGTTTTGTCGAAAAGCAC CATGATACCAAGGGTATATTTCACCAGGAAAGACATAAAAATGCCCGCAG TTTTCCTACTGGTCAACGTGGCGCCACTGATTTCTGATTGGAAACTACCT GATCGGCGAGTGACGTCAGCCACGGCCGAGATTTCGTGGCCTCTCGTCTT CGAGAAGGATCGGGCTCGTTGTGGTGGGAGTCTTGGGGGTCTTGGGGGTC TCTCCTCCCTTGCCACGAGGGGGGGGGGAGGGATGGGCGGGGGGGCGAAA TGTCGCAACGCACCTCGTCGGCACGTTTTGTCAATGCTTCGACCAATACG TAGGGCACCTTGTGCGAAGGCCTTCCATCAGTGTTAAATGTAGCGCGCGA GAGATCCTGACATCGCATTCGGGGCGGAGATGCCCTTCCTCCCTCTATTG CCGCAACTCAACACTGCTGTGCCCAGCGGGGCAGCCCATGCCCACCTCTC TGCTCGGGGCTATCATATGTCAGACATGTAATTGTTGTTGTCGCTCATAC CCCCCCCCCCCCCCCACCCCGCATCCGCCCCCGGGCTTGCGTTGTTTTTC GTGGTATTCGATCGTTTTATTGCGCATACTATAAACAGGGCAATTGCGGA GGGAAAGTCGCGGCGGCGTTTTCACCTAGGCAAGGATCCTGCCTCGTCCA CGGACACGGGCGGCAGTGCCTGCTACACGAGGGCGCCGCTGTTACCTCCG GAGTCAAGTACCTCCTTCGCACTGATGTTATGTATGCCTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig76:402333..406723+

>mRNA_P-littoralis_Contig76.149.1 ID=mRNA_P-littoralis_Contig76.149.1|Name=mRNA_P-littoralis_Contig76.149.1|organism=Pylaiella littoralis U1_48|type=CDS|length=846bp|location=Sequence derived from alignment at P-littoralis_Contig76:402333..406723+ (Pylaiella littoralis U1_48)
GCCGAAACTCTCCTGCAGCAGCGAGTGGCAGGCCCGGCGGTATTGCCGCC
TCCGGGTGCGAATGGAACGGGAAAGGGCGACAAAAAGAGGCTCGAGCTCG
ATTTAGTATCGAAGCGAGTTTACCAAGAGACCATTCTAAGTATCGAGAGC
CTGCTTAGCCCCCGGGAGTGCGCAGCGTGGATACGGCACGGCGAGGATAA
GGGCTTCGAGCGGAGCTTCCACAGGCAGACGTCGGAGATGGCCCACCGCG
ACAACGGAAGGATAACCCTGCACAGCGTTGAAGTTGCTGCCGCCATCTTC
GCGAGAGTGGGACCCTTCGTCCCCGCCGAGATGAGTGGAAGGTGCGCGGT
GGCGTGCAATTCCAACATCCGCATCTACCGGTACGCCGTCGGCCAAAGGT
TCGGCAAGCACATCGACGAGAGCGTCGAGGATGAAAACGGACACCACAGC
CAGTGGACGGTGTTGATTTACTTGAACGGAGGAGGGGAAAGAGGAGAGGG
AGCAGGGACGGCATCAGCATCAGCAGGGGGGGCATTGCTGGACATGAGTA
AGGGTGGTGCGGGGGAAGTCGCCGGATGGTCCGCAGGGTCTGCGGCTGGC
GGCGGTGTCGGTCCTGGGGAGGACGGGGCTCCTCTCCGAGGAGGAGAAAC
TGTATTTTACAAGGCGAGAGATACAGAGCTTTCAATGTGCTTTGGCAATT
GCGGAGGGAAAGTCGCGGCGGCGTTTTCACCTAGGCAAGGATCCTGCCTC
GTCCACGGACACGGGCGGCAGTGCCTGCTACACGAGGGCGCCGCTGTTAC
CTCCGGAGTCAAGTACCTCCTTCGCACTGATGTTATGTATGCCTGA
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