mRNA_P-littoralis_Contig759.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: A0A6H5JJ00_9PHAE (GBP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ00_9PHAE) HSP 1 Score: 117 bits (293), Expect = 6.190e-32 Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 1
Query: 1 LNVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFERGGSGI-----NSSHEPRIAFVDMEGQGDQSAEHDVRLATP 270
L+++TILGAA+Q KSFLMNALT D+ FRVSP+ PCTAGADLS I+M LSEF+RG +G +SS +P I FVDMEGQGD+S E DVRLATP
Sbjct: 34 LSIVTILGAARQEKSFLMNALTRRDNGFRVSPEGYPCTAGADLSSILMPLSEFKRGSAGNTTHLPSSSPQPTIRFVDMEGQGDRSDERDVRLATP 128
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: D8LML6_ECTSI (GBP1, guanylate-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML6_ECTSI) HSP 1 Score: 124 bits (312), Expect = 2.920e-31 Identity = 65/95 (68.42%), Postives = 77/95 (81.05%), Query Frame = 1
Query: 1 LNVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFERGGSGINSSH------EPRIAFVDMEGQGDQSAEHDVRLAT 267
LN++TILGAA++GKSFLMNALTG DD+F VSP+V PCTAGAD+SP + SLS+FER G G +SH +P IAFVDMEGQGD+S EH VRLAT
Sbjct: 156 LNIVTILGAARRGKSFLMNALTGHDDLFPVSPNVAPCTAGADISPFLASLSDFERAG-GSQTSHIPPVTPKPTIAFVDMEGQGDKSNEHGVRLAT 249
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: D8LML7_ECTSI (GBP2, guanylate-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML7_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.120e-30 Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 1 LNVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFERGGSGI-----NSSHEPRIAFVDMEGQGDQSAEHDVRLATP 270
L+V+TILGAA+QGKSFLMNALT SD+VFRVSP+V PCT G DL PI+M LSEF+RG + +SS +P I FVDMEGQGD+S E DVRLATP
Sbjct: 34 LSVVTILGAARQGKSFLMNALTRSDNVFRVSPEVYPCTEGVDLFPILMPLSEFKRGSARNITHLPSSSPQPTIGFVDMEGQGDRSDERDVRLATP 128
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: D7FYG1_ECTSI (GBP3, guanylate-binding proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG1_ECTSI) HSP 1 Score: 115 bits (287), Expect = 6.440e-28 Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 1
Query: 1 LNVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFERG-GSGINSS----HEPRIAFVDMEGQGDQSAEHDVRLATP 270
LN++TI+G A++GKSFLMN LTG D +FR S + PCTAGADLS I+MSL++F RG GS +S EP I FVDMEGQGD+S +HDVRLATP
Sbjct: 43 LNIVTIVGNARKGKSFLMNQLTGHDGMFRASANTEPCTAGADLSSIVMSLTDFRRGSGSSSKASGPSPSEPAIVFVDMEGQGDKSTDHDVRLATP 137
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: A0A7S3URQ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URQ4_HETAK) HSP 1 Score: 89.4 bits (220), Expect = 1.860e-20 Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 1 LNVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFER-----GGSGINSSHEPRIAFVDMEGQGDQSAEHDVRLATP 270
LN+++I GAA+QGKSFLMN L+G +++F++S + PCT G D+S +SL +F G+ I++S ++ FVD EGQGD+ AE+D RL +P
Sbjct: 29 LNLISIFGAARQGKSFLMNLLSGQENIFQISNNQDPCTQGIDISGNFVSLKDFASVDSPADGAAIDTSKGMQVGFVDAEGQGDRDAEYDARLVSP 123
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: D8LC12_ECTSI (GBP5, guanylate-binding protein (Divergent) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC12_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 1.100e-18 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 4 NVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFER-----GGSGINSSHEPRIAFVDMEGQGDQSAEHDVRLAT 267
NV+ I GAA+ GKSFLMN L G DD+F++S D PCT G D+S ++ L +F G+++S++ R+ F D+EGQGD+ A +D RLA+
Sbjct: 22 NVVAIFGAARGGKSFLMNQLAGQDDIFKISNDKDPCTQGVDVSRAVVPLKDFATLDGCTAPRGVSTSNQVRVLFADVEGQGDRDAAYDARLAS 114
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: A0A067BQ42_SAPPC (GBP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQ42_SAPPC) HSP 1 Score: 88.2 bits (217), Expect = 2.060e-18 Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 1 LNVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFERGGSGINSSHEPRIAFVDMEGQGDQSAEHDVRLATP 270
+N+++I GAA+QGKSFLMN L D+FR+S + PCT G DLS M L+EF R + ++ FVD EGQGD+ +D RL +P
Sbjct: 38 INLISIFGAARQGKSFLMNLLANQQDLFRISNEKEPCTQGVDLSSHFMPLAEFSRQNGNTSIPSSMKVGFVDAEGQGDRDITYDSRLVSP 127
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: A0A3R6YGE9_9STRA (GBP domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6YGE9_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.440e-17 Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 4 NVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFER-GGSGINSSHEPRIAFVDMEGQGDQSAEHDVRLATP 270
N+++I GAA+QGKSFLMN L D+FR+S + PCT G DLS M L F R G SS I FVD EGQGD+ +D RL +P
Sbjct: 36 NLISIFGAARQGKSFLMNLLANQQDLFRISNEKEPCTQGVDLSSHFMPLESFSRINGCPPVSSPNMSIGFVDAEGQGDRDITYDSRLVSP 125
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: A0A3R7B7X5_9STRA (Protein geranylgeranyltransferase type II n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7B7X5_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 8.700e-17 Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 4 NVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFER-GGSGINSSHEPRIAFVDMEGQGDQSAEHDVRLATP 270
N+++I GAA+QGKSFLMN L D+FR+S + PCT G DLS M L F R G SS I FVD EGQGD+ +D RL +P
Sbjct: 36 NLISIFGAARQGKSFLMNLLANQQDLFRISNEKEPCTQGVDLSSHFMPLESFSRINGCPPVSSPNMSIGFVDAEGQGDRDITYDSRLVSP 125
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Match: A0A418FZ26_9STRA (GBP domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FZ26_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.110e-16 Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 4 NVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLSEFER-GGSGINSSHEPRIAFVDMEGQGDQSAEHDVRLATP 270
N+++I GAA+QGKSFLMN L D+FR+S + PCT G DLS M L F R G SS I FVD EGQGD+ +D RL +P
Sbjct: 36 NLISIFGAARQGKSFLMNLLANQQDLFRISNEKEPCTQGVDLSSHFMPLEAFSRINGCPPVSSPNMSIGFVDAEGQGDRDITYDSRLVSP 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig759.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig759.4.1 >prot_P-littoralis_Contig759.4.1 ID=prot_P-littoralis_Contig759.4.1|Name=mRNA_P-littoralis_Contig759.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=90bp LNVLTILGAAKQGKSFLMNALTGSDDVFRVSPDVVPCTAGADLSPIIMSLback to top mRNA from alignment at P-littoralis_Contig759:43174..43443- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig759.4.1 ID=mRNA_P-littoralis_Contig759.4.1|Name=mRNA_P-littoralis_Contig759.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=270bp|location=Sequence derived from alignment at P-littoralis_Contig759:43174..43443- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig759:43174..43443- >mRNA_P-littoralis_Contig759.4.1 ID=mRNA_P-littoralis_Contig759.4.1|Name=mRNA_P-littoralis_Contig759.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=270bp|location=Sequence derived from alignment at P-littoralis_Contig759:43174..43443- (Pylaiella littoralis U1_48)back to top |