mRNA_P-littoralis_Contig757.22.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 275 bits (703), Expect = 1.520e-84 Identity = 132/185 (71.35%), Postives = 159/185 (85.95%), Query Frame = 1
Query: 76 RPRYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMR 630
R YAR+ GLDK+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R+ QDV+E+ FGHMR GLGSHRNPTA QAKER ARGD+ R LHG RAN+NRNAR+G+D++ASGYRA +MLP+ EGERS +R
Sbjct: 554 RSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQRNCGQDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIR 738
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 225 bits (573), Expect = 4.300e-71 Identity = 118/171 (69.01%), Postives = 134/171 (78.36%), Query Frame = 1
Query: 85 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLP 597
YARK GLDK GY SADDSKLE LMDILRFF++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ L D P ++N R QD+VE+R+GHM LGSH NPTA QAKERAA+ DL RSLHG SRANH AR+G+D+IASG R RIMLP
Sbjct: 44 YARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLRCIGQDIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRANH---ARKGEDFIASGIRGRIMLP 209
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 152 bits (385), Expect = 3.350e-42 Identity = 89/194 (45.88%), Postives = 126/194 (64.95%), Query Frame = 1
Query: 76 RPRYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEK---TTLGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLR-DTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRN--ARRGQDYIASG--YRARIMLPITEGERSATMR 630
R + RK G K G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ L + R+++PR+ QD+ E+RF H+R LG+HRNPTA +AK+R+A GDL R+ +G+ R N +RN AR G D+ G + I+L +T+ E +R
Sbjct: 69 RSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVR 262
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5JS87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS87_9PHAE) HSP 1 Score: 135 bits (340), Expect = 6.910e-37 Identity = 86/175 (49.14%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 118 GYITSADDSKLEELMDILRFFE----KWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMR 630
GYI SADDSKLEELMDILRFF+ +WR + T G T S R S G D+VE+R+ HMR LGS+ NPTA QAKERAARGDL RSLHG SRANHN+N R+G+++IASG R RIMLP+T+ ERSATMR
Sbjct: 3 GYIRSADDSKLEELMDILRFFDDGGPRWRLDRRWATAPGRRT---------SSPTTRGSTSG---------------------------------PDIVEHRYAHMRQSLGSNSNPTAAQAKERAARGDLYRSLHGVSRANHNKNERKGEEFIASGIRGRIMLPVTDAERSATMR 135
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 142 bits (357), Expect = 1.500e-35 Identity = 79/181 (43.65%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 91 RKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDY-IASGYRARIMLPITEGERSATMR 630
RK+G +K+ GYIT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+ L R++ PR QD++E+RF H+R G G+H+NPTA QA E A GD R HG R N +R+A G + + R P ER+ +R
Sbjct: 483 RKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDED------LVSGGRFLYPRMFSQDILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSA--GMAFQLEDSQGVRAAFPANASERAQVVR 653
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 140 bits (354), Expect = 5.770e-35 Identity = 67/108 (62.04%), Postives = 81/108 (75.00%), Query Frame = 1
Query: 85 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVEN 408
YARK GLDK YI SADDSKLEE+MDIL F++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ L D P ++N R+ Q +N
Sbjct: 434 YARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRYIGQASQKN 541
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 120 bits (302), Expect = 4.750e-31 Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = 1
Query: 391 QDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMR 630
+D VE+RFGH R GLGSHRNPTATQAKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR
Sbjct: 66 RDPVEHRFGHTRQGLGSHRNPTATQAKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMR 145
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5JZW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW9_9PHAE) HSP 1 Score: 114 bits (286), Expect = 2.460e-29 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 118 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTP 363
GYI S DDSKL+ELMDIL FF++WR +LE + TLGD WK HFIT++ WTD RV ILG V MCRYL E DSRFK+S L P
Sbjct: 3 GYIRSTDDSKLDELMDILWFFDEWRASLEARPTLGDGAWKAHFITDHLWTDSRVCILGTVRMCRYLIEKDSRFKISPLNMFP 84
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.860e-26 Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 421 MRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMR 630
MR GLGSHRNPTATQAKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR
Sbjct: 1 MRQGLGSHRNPTATQAKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMR 70
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 106 bits (264), Expect = 2.790e-26 Identity = 53/70 (75.71%), Postives = 59/70 (84.29%), Query Frame = 1
Query: 421 MRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMR 630
MR LGSH NP A QAKER ARGDL RSLHG SRANHN+NAR+G+D+IASG R RIMLP+T+ ERSATMR
Sbjct: 1 MRQSLGSHSNPIAAQAKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMR 70 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig757.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig757.22.1 >prot_P-littoralis_Contig757.22.1 ID=prot_P-littoralis_Contig757.22.1|Name=mRNA_P-littoralis_Contig757.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp GGPRTRSHTTPTTSDRALESDRCAPRPRYARKKGLDKKAGYITSADDSKLback to top mRNA from alignment at P-littoralis_Contig757:47893..51046- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig757.22.1 ID=mRNA_P-littoralis_Contig757.22.1|Name=mRNA_P-littoralis_Contig757.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3154bp|location=Sequence derived from alignment at P-littoralis_Contig757:47893..51046- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig757:47893..51046- >mRNA_P-littoralis_Contig757.22.1 ID=mRNA_P-littoralis_Contig757.22.1|Name=mRNA_P-littoralis_Contig757.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig757:47893..51046- (Pylaiella littoralis U1_48)back to top |