mRNA_P-littoralis_Contig756.21.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE) HSP 1 Score: 493 bits (1268), Expect = 2.200e-147 Identity = 390/1046 (37.28%), Postives = 515/1046 (49.24%), Query Frame = 3
Query: 1605 DAGVMAQLSLFVRENFPFVLTHRSAAHMCVMEDVTYNLVHGKGFGASRTALEQAHRKEFHAIDLISVAESKSASTIGHIGETLLQWVCPFGTLPFIGVDRRNADQTGGQERQASPRSGGRVGRGSTSSTCANNAWMGEC*RSTAPISTSSLFDCPTLELREARSLSSSSSQSSTSSNRWCFRRVLQSASLKEIKADVKTMVATRYKGRWFQLRRVLYMGMYCEDRALMVEIFRELCDEGHNFSINDDKPAPSDGPVFDLPPDVNPIGCINASGDTKVVRAGVDKLRQEAKYNGGVLGLDIEWEVSLFGALAIPPATIKLAAGKLVVILHVLHGQQKPPEKLPQSLVGSMEDASLFKTGVGIKGDCTRLQRFFGVDVRNVVDLPGLTHQ-----------LDLCLHLLGKRLEKEQHLKSTNVKTQLSR*NLAELTEEQKRYGMLREVRTCLTFG-IGASRSGLTQFSGEWRICTPGTACISTHGGRDECVREGCIIEY-DKNMGVDRY--LPRALSCYSSTLGRKRR*VVRASKVLVPLANMVYPDETDTPRTQPTAHVGDWEDKLLLCDADRMRKAT------------------------------------------NNACDCARVAPPPAATSSQDSGGLFAAPESASTAQGGEQKVGGAYLVGRGQKESPNCSGTTELSNAT-ATGTGG--LVTPSEPFTPGSF-----LMSK---LSAPNQCFLPRMRRVAG*GDDETRQ-----VAANFFTASADHLPRMRLWTASAKTARLCLCLDPFHGMQRPSKLVLKSYGACGAYMARLRDAWFIVYKEDLAGVEEALRLLGKSPEDIETKKRTDRSYFRQRCRRGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYFEGGKDDARSIAVCVAPMTWRDTTCTCSCWRHGAFRRGSLISSSST-------TTGGTLRQAVKNRGLDSSFRVFYDQPVLEAVQKITSVLFGKAAYPAWHPAWVPTSAHGDTGERSWFVRNI 4502
++ V+A L L+V+E+FPF LT +SA H V+ +V NL+H KGF AS AL+QAH FH+++L + +L W RR G E + GS N + S + S+++ C ++ A L + ++ LQSASL+E+K D+K + TRY G F+L R++ C D+AL+ EIF EL EGH FS+ + P S+ PV LPPDV + A+ D+ ++A VD +R +A+ N G+L LDIEWE+S GA A PPATI+LAAGK VVI HVLHGQ+ P +LP LV +ED L KTGVGIKGDCTRL F+GV+V + VDL L + DLC+HLLG++L K+ ++ LS+ N +L+++QKRY L L G IG + + + E + + T G D CV EGCI+E+ D+ G + +PR +T RR VR +V VP A +YPD TD T TA + D ++L DA R+RK T + AR A TSS + + S +GG GG KE P + ++A G GG VTPSEPF G L S+ SA + + GDDE V A+ +A + L + K A L + LD FH MQR SKL+LKS+GAC AY+ARLRDA+F V EDLA VE ALR G S E++E KK D YF +RCRR IP PAELL RFD V + L+ KKT+QPL RAEA A KRL VHI C +D +LYFE GKD + +C R T H IS LRQ++KNRGLD + FYDQP+LEA+Q++TS L+GKA Y W +PTSA+GDTGERS FVR+I
Sbjct: 6 NSDVLALLPLYVQESFPFFLTRKSAIHRDVVAEVADNLMHAKGFSASSEALQQAHLYRFHSMELKYYS--------------MLLW-------------RREEQLDAGVEDEF----------GSFEDADGYNGF------SPSEHYLSTVW-CERMQQSRAARLDK---HVNGVQGEVVLQKALQSASLRELKQDLKALFITRYTGGGFKLPRLVSTDECCNDKALLNEIFEELASEGHQFSVTNSVPIASECPVLHLPPDVVLGEPVKANQDSPCLKAAVDAIRMQAEANNGLLALDIEWEISAAGAPANPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVR-------LSKWNKLDLSDDQKRYAALDAYACLLLHGRIGELSDSIFRDAEELHVGD--RVRLYTRAGND-CVGEGCIVEHTDETWGTTGFYLVPRR-----ATRRFARRWAVRLDRVHVPRAKTLYPDATDPRGTPATAQLASRVDSVILWDASRLRKTTAILTVGAAGEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEARTAAXXXXTSS-----VHVETSTVSCERGGPGGGGG--------KEGPRLPDSVGEADARRGAGQGGTEFVTPSEPFFCGELDGIEALSSESVACSAGSGGLADEGQAATAGGDDEEEDEVPLDVTADTSSAEVEELLFL-------KVAGLVVKLDTFHAMQRVSKLILKSHGACRAYLARLRDAFFKVNAEDLAAVEAALRQAGMSKEEVEAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGG------LIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKD---AETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQW----LPTSAYGDTGERSGFVRSI 956
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE) HSP 1 Score: 227 bits (579), Expect = 2.120e-59 Identity = 207/597 (34.67%), Postives = 275/597 (46.06%), Query Frame = 3
Query: 2772 DLCLHLLGKRLEKEQHLKSTNVKTQLSR*NLAELTEEQKRYGMLREVRTCLTFGIGASRSGLTQFSGEWRICTPGTACISTHGGRDECVREGCIIEY-DKNMGVDR-YL-PRALSCYSSTLGRKRR*VVRASKVLVPLANMVYPDETDTPRTQPTAHVGDWEDKLLLCDADRMRKATNNACDCARVAPPPAATSSQDSGGLFAAPE----SASTAQGGEQKVGGAYLVGRGQKESPNC--SGTTELSNATATGTGGLVTPSEPFTPGSFLMSKLSAPNQCFLPRMRRVAG*GDDETRQV----AANFFTASADHLPRMRLWTASAKTARLCLCLDPFHGMQRPSKLVLKSYGACGAYMARLRDAWFIVYKEDLAGVEEALRLLGKSPEDIETKKRTDRSYFRQRCRRGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYFEGGKDDARSIAVCVAPMTWRDTTCTCSCWRHGAFRRGSLISSSST-------TTGGTLRQAVKNRGLDSSFRVFYDQPVLEAVQKITSVLFGKAAYPAWHPAWVPTSAHGDTGERSWFVRNI 4502
DLC++LL K+L K+ ++ LS+ N +L+++QKR IG + + + E + + + T G D CV EGCI+E+ D+ G YL PR +T G RR V +V VP A +YPD TD TA + D ++L DA R+RK T A AP A+ A E ++ + + +C SG + G GGL + + A GDDE +V A+ +A + L ++L + L SKL+LKS+GAC AY+ARLRD +F V EDLA VE ALR G S E++E KK D F +RCRR IP PAELL+RFD V + LL KKT+QPL RAEA A KRL VHI C +D +LYFE GKD + +C R T H IS LRQ++KNRGLD + FYDQP+LEA+Q++TS L+GKA Y W +PTSA+GDTGERS FVR+I
Sbjct: 17 DLCVNLLEKQLPKDPIVR-------LSKWNKLDLSDDQKRR-------------IGELSDSIFRDAEEMHVGD--SVRLYTRAGND-CVGEGCIVEHTDETWGTTGIYLVPRR-----ATRGFARRWAVHLDRVHVPRAKALYPDATDRRGDPATAQLASRVDSVILWDASRLRKMTATPSAGAAGAPXXXXXXXXXXXXXXXXXXXXXXEAARAPAEEAATSSEHV----EASTVSCERSGLRATNGGGKEGAGGLTDERQ-----AXXXXXXXXXXXXXXXXXXATARGGDDEEAEVLLDVTADMSSAEVEELLFLKLKALDQRNYALLRL-----AAGEVSKLILKSHGACRAYLARLRDEFFKVNAEDLAAVEAALRQAGMSKEEVEAKKGKDWVLFLKRCRRLIPRPAELLKRFDVVNNLYGG------LLDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDAPNEALYFEAGKD---AETLCPLFRCIRGTNDLEGFHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPILEAIQRMTSKLYGKAKYSQW----LPTSAYGDTGERSGFVRSI 558
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI) HSP 1 Score: 177 bits (450), Expect = 1.590e-41 Identity = 242/967 (25.03%), Postives = 387/967 (40.02%), Query Frame = 3
Query: 1416 PCPRCKTTSHVIAKRFTQKESRRAVLRDSCCDLLGFLHHCHGCESKNQGKPKNSKVPESFPIRDAGVMAQLSLFVRENFPFVLTHRSAAHMCVMEDVTYNLVHGKGFGASRTALEQAHRKEFHAIDLISVAESKSASTIGHIGETLLQWVCPFGTLPFIGVDRRNADQTGGQERQASPRSGGRVGRGSTSSTCANNA----WMGE--C*RSTAPISTSSLFDCPTLELREARSLSSSSSQSS--------TSSNRW---CFRRVLQSASLKEIKADVKTMVATRYKGRWFQLRRVLYMGMYCEDRALMVEIFRELCDE--GHNFSINDDKPAPSDG----PVFDLPPDVNPIGCINASGDTKVVRAGVDKLRQEAKYNGGVLGLDIEWEVSLFGALAIPPATIKLAAGK-LVVILHVLHGQQKPPEK-LPQSLVGSMEDASLFKTGVGIKGDCTRLQRFFGVDVRNVVDLPGLTHQL----------DLCLHLLGKRLEKEQHLKSTNVKTQLSR*NLAELTEEQKRYGMLREVRTCLTFGIGASRSGLTQFSGEWRICTPGTACISTHGGRDECVREGCIIEYDKNM-GVDRYLPRALSCYSSTLGRKRR*VVRASKVLVPLANMVYPDETDTPRTQPTAHVGDWEDKLLLCDADRMRKATNNACDCARVAPPPAATSSQ---DSGGLFAAPESASTAQGGEQKVGGAYLVGRGQKESPNCSGTTELSN-------ATATGTGGLVTPSEPFTPGSFLMSKLSAPNQCFLPRMRRVAG*GDDETRQVAANFFTASADHLPRMRLWTASAKTARLCLCLDPFHGMQRPSKLVLKSYGACGAYMARLRDAWFIVYKEDLAGVEEALRLLGKSPEDIETKKRTDRSYFRQRCRRGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYFEGGKDDA 4178
PCP C + E RR L D C L+G+ + C GC N+G+P++ + ++F DAGV+A + +V + FPFVLT ++A V++ + +L+ G GF A+ +L + + L S + H G W P L I D +G S G + T A W E R + SL + + + LS+ + + T N + F + + +AS+ ++K D+K M R+ G F+L + Y C+DR L++ +F+E+ E + ++ S G P + PP + ++ + V L + G VLGLD EWE SL G P +T++L+ + G +K P++L +E+ S+ K GV I D T L+R +G++V N VDL Q + LLG++L K+ ++ + + LS ++Q R +C+ G+G + TA + G R+G + + + GV + P A Y++ G R AS V V DE A+ GD +L+L D +R ++ A AP +S+ D+ F +P ++V E P+ E ++A G GL E G A N D M W + A L + LD FH +QR S+L KS+GA +MARL+DA FIV ++D+ VE+AL G +PE + K +YF + CRR +P LL RF+SVI N ++ K+ + L+ + A +L HI++ ++DP G LY+ G++ A
Sbjct: 54 PCPHCNKRAQPDG---WNTEPRRVFLEDDVCYLIGYRYLCKGCTEANKGRPEDERTTQTFNAWDAGVLATMDDYVSKEFPFVLTKKAAISKSVVDRLADDLLEGTGFAAASKSLANTYHARYFN-QLRSYVSLANRCVSRHKG----MW--PNVDLGMIPKFSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKAMTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFKEIELETGARLYDTAEEAGGGSPGVEVLPALEFPPGKRGECVFDFRPNS--IAPSVVALIDGCQLQGNVLGLDCEWEPSLGGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVETPSRSLAGMASSLLGRQLPKDPVIRLSRWSSPLS--------DDQVRLYSNNHA-SCV--GVG-------------EVQDDDTAAEALAGWFPGARRKGRLTQVVVGLSGV--FKPAA---YTAHKGAPRA----ASGV-----GRVTMDE---------AYKGD---RLVLWDVAHVRLVSDWKPSPAAAAPSSNENASEAYNDNAQFFTSPRPP-------------HVVRLQDDEDPDDGDEEEYDGHDCGDLGSSARGDHGLWAGVEAGGGGG------GAVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXGGD--VDMDDWLGDEQCA-LQVRLDIFHALQRISRLCKKSHGAFKPFMARLKDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKSWTYFLRNCRRLVPERQRLLERFNSVINQFCN------VVDAKSGEVLILPKVMQAVDQLRKHIESDRLSDPHGVPLYYTTGQNAA 930
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI) HSP 1 Score: 160 bits (406), Expect = 9.620e-37 Identity = 210/816 (25.74%), Postives = 325/816 (39.83%), Query Frame = 3
Query: 2157 LQSASLKEIKADVKTMVATRYKGRWFQLRRVLYMGMYCEDRALMVEIFRELCDE--GHNFSINDDKPAPSDG----PVFDLPPDVNPIGCINASGDTKVVRAGVDKLRQEAKYNGGVLGLDIEWEVSLFGALAIPPATIKLAAGK-LVVILHVLHGQQKPPEK-LPQSLVGSMEDASLFKTGVGIKGDCTRLQRFFGVDVRNVVDLPGLTHQL----------DLCLHLLGKRLEKEQHLKSTNVKTQLSR*NLAELTEEQKRYGMLREVRTCLTFGIGASRSGLTQFSGEWRICTPGTACISTHGGRDECVREGCIIEYDKNM-GVDRYLPRALSCYSSTLGRKRR*VVRASKVLVPLANMVYPDETDTPR--------TQPTAHVGDWEDKLLLCDADRMRKATNNACDCARVAPPPAATSSQ---DSGGLFAAPESASTAQGGEQKVGGAYLVGRGQKESPNCSGTTELSNATATGTGGLVTPSEPFTPGSFLMSKLS-APNQCFLPRMRRVAG*GDDETRQVAANFFTASADHLPRMRLWTASAKTARLCLCLDPFHGMQRPSKLVLKSYGACGAYMARLRDAWFIVYKEDLAGVEEALRLLGKSPEDIETKKRTDRSYFRQRCRRGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYFEGGKDDAR-SIAVCVAPMTWRDTTCTCSCWRHGAFRRGSLISSSSTTTGGTLRQAVKNRGLDSSFRVFYDQPVLEAVQKITSVLFGKAAYP--AWHPAWVPTSAHGDTGERSWFVRNI 4502
+ +AS+ ++K D+K M R+ G F+L V++ C+DR L++ +F+E+ E + ++ S G P + PP + ++ + V L + G VLGLD EWE SL G P +T++L+ + G +K P++L +E+ S+ K GV I D T L+R +G++V N VDL Q + LLG++L K+ ++S+ + LS + E+ + Q FS PGT CV G + + D + + P A GR + VV S V P A Y TP T A+ GD +L+L D +R ++ A AP +S+ D+ F +P ++V E P+ E G F G A N D M W + A L + LD FH +QR S+L KS+GA +MARLRDA FIV ++D+ VE+AL G +PE + K + +YF + CRR +P LL RF+SVI N ++ K+ + L+R +A A +L HI++ C++DP G LY+ G++ A + CV + + +R +R AVKNRGL F+DQ +E +Q+ TS + YP P W+ DTGE+S +++
Sbjct: 1 MTTASVHDLKNDLKMMFVKRFLGHGFKLP-VIFSDECCDDRQLLLTMFKEIELETGARLYDTAEEAGGGSPGVEVLPALEFPPGKRGECVFDFRPNS--IAPSVVALTDGCQLQGNVLGLDCEWEPSLAGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVETPSRSLAGMASSLLGRQLPKDPVIRSSRWSSPLS--DNQEVAKFQDPI-----------------------FSPPPVELHPGTKVRLYSNNHASCVGVGEVQDDDTAAEALAGWFPGA-----RRKGRLTQVVVGLSGVFKPAA---YTAHKGTPSAASGVGRVTMDEAYKGD---RLVLWDVAHVRLVSDWKPSPAAAAPSSNENASEAYNDNAQFFTSPRPP-------------HVVRLQDDEDPDDGDEEEYDGHDCGDLGSSARGDHGFWAGVEAGGGGGGAVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXGD--VDMDDWLGDEQCA-LQVRLDIFHALQRISRLCKKSHGAFKPFMARLRDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKNWTYFLRNCRRLVPERQRLLERFNSVINQFCN------VVDAKSGEVLIRPKAMQAVDQLRKHIESDCLSDPHGVPLYYTTGQNAAGITTRRCVRGTNYTEFN----------YRWN-------------IRMAVKNRGLPREVGEFFDQFEIEIIQRETS-----SWYPDNPLFPEWISALDAADTGEKSGLSQSL 727
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI) HSP 1 Score: 131 bits (330), Expect = 2.940e-27 Identity = 174/677 (25.70%), Postives = 263/677 (38.85%), Query Frame = 3
Query: 2424 DTKVVRAGVDKLRQEAKYNGGVLGLDIEWEVSLFGALAIPPATIKLAAGKLVVILHVLH--GQQKPPEKLPQSLVGSMEDASLFKTGVGIKGDCTRLQRFFGVDVRNVVDLPGLTHQ--LDL-CLHLLGKRLEKEQHLKSTNVKTQLSR*NLAELTEEQKRYGMLREVRTCLTFG-IGASRSGLTQFSGEWRICTPGTACISTHGGRDECVREGCIIEYDKNMGVDRYLPRALSCYSSTLGRKRR*VVRASKVLVPLANMVYPDETDTPRT--QPTAHVGDWEDK--LLLCDADRMRKATNNACDCARVAPPPAATSSQDSGGLFAAPESASTAQGGEQKVGGAYLVGRGQKESPNCSGTTELSNATATGTGGLVTPSEPFTPGSFLMSKLSAPNQCFLPRMRRVAG*GDDETRQVAANFFTASADHLPRMRLWTASAKTARLCLCLDPFHGMQRPSKLVLKSYGACGAYMARLRDAWFIVYKEDLAGVEEALRLLGKSPEDIETKKRTDRSYFRQRCRRGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYFEGGKD-DARSIAVCVAPMTWRD------TTCTCSCWRHGAFRRGSLISSSSTTTGGTLRQAVKNRGLDSSFRVFYDQPVLEAVQKITSV 4403
D + V L G VLG+D EWE + G+ P T++LA L L G+ P +L + D ++ K GV +KGD RLQR + V+ R +VDL +DL C L G S + + S + ELT Q Y L L IG + + GE P + + G ++ +G G +R VV+ L P ++ V D+ P Q V D D +L D +R A+ + P AA + F AP A Q V Y G + ++ +G G + SE + G P+ VA +++ A + F LD FH + R S+ + K +GA MARLRDA F+V ++D+ +E+ L G SP ++ K D SYF ++CRR +PPP+ELL+RFD V++ N + +++ LLR ++ A L HI AGC++DP G ++Y+ GK D CV + T S A + L+ + L+ VKNRGL + Y+Q ++E +Q+ T +
Sbjct: 165 DKTAIDIAVANLVGGCATQGMVLGMDCEWEPAFNGSSERPVCTLQLALPDGTSSLFHLQRGGRGITPSTFNTNLKRLLGDLAITKVGVAVKGDGKRLQRDYDVETRGMVDLRSYARACWVDLPCRSLAGMTATALGKYLSKDAAGRFSHWSRPELTPNQIEYACLDAYAAVLLHAEIGKFKDPIF---GEAPSEVPAAGTKTEEEATSLLEKWGTVLTLGGRVGTRS-------------GGLQRVVVKVDNALKP-SSFVPHDKAPPPAQDGQRRVTVKDVVDGAGFVLWDIVHVRLASAHRSFEGTPLPGGAADADAHQDDFFDAPRPA-------QAV---YQNGGDVESDLEADSESDDDTFGESGAGADLASSEASSGG---------PSASXXXXDAAVA------SQEEAGDMFFVR----------------------LDLFHALNRLSRTIKKGHGAFRPIMARLRDACFLVNRDDVLQIEKVLERRGMSPAQVQQAKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGN------CVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWN---LKMMVKNRGLPAELGEHYNQHLVEIIQRATEL 768
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE) HSP 1 Score: 131 bits (329), Expect = 6.330e-27 Identity = 188/745 (25.23%), Postives = 292/745 (39.19%), Query Frame = 3
Query: 2424 DTKVVRAGVDKLRQEAKYNGGVLGLDIEWEVSLFGALAIPPATIKLAAGK-LVVILHVLHGQQKP-PEKLPQSLVGSMEDASLFKTGVGIKGDCTRLQRFFGVDVRNVVDLPGL--THQLDL-CLHLLGKRLEKEQHLKSTNVKTQLSR*NLAELTEEQKRYGMLREVRTCLTFG-IGASRSGLTQFSGEWRICTPGTACISTHGGRDECVREGCIIEYD------KNMGVDRYLPRALSCYSSTLGRKRR*VVRASKVLVPLANMVYPDETDT-------PRTQPT---AHVGDWEDKLLLCDADRMRKATNNACDCARVAPPPAATSSQDS--GGLFAAPESASTAQGGEQKVGGAYLVGRGQKESPNCSGTTELSNATATGTGGLVTPSEPFTPGSFLMSKLSAPNQCFLPRMRRVAG*GDDETRQVAANFFTASADHLPRMRLWTASAKTARLCLCLDPFHGMQRPSKLVLKSYGACGAYMARLRDAWFIVYKEDL-------------AGVEEALRLLGKSPEDIETKKRTDRSYFRQRCRRGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYFEGGKD-----DARSIAVCVAPMTWRDTTCTCSCWRHGAFRRGSLISSSSTTTG--------GTLRQAVKNRGLDSSFRVFYDQPVLEAVQKITSVLFGKAAYPAWHPAWVPTSAHGDTGERSWFVRNIRG 4508
D K + V + + K G VLG+D EWE G+ T++LA + H+ G ++ P +SL + D ++ K GV +KGD +RLQR +GV+ +VDL T +DL C L G S N + SR + AELT+ Q Y L + IG S+ + + I GT + CV G + + + + G D L + S L +R VV+ VL P + + D PR + H G + +L D +R A+++ + P PAA++ D+ F P A + V A L G P+ S + + +A G G + A P S + LDPFH + R S++ KS+GA +MARLRDA F+V ++D+ VE L G PE+++ + S+F + RR +P LL+RFD VI + + + LLR +A A ++L HI+ C++DP G ++YF GK+ D R + R T R+ S +S S LR +KNRGL ++ Y+Q ++E++Q+ T+ +++P + P W DTGER R++ G
Sbjct: 68 DEKAINLAVMEFVEGCKQQGHVLGMDCEWEPPFDGSSEGAVCTLQLALPDGTAYLFHLQRGTRRTRPSTFNRSLKVLLNDPTITKVGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDLPCRSLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQVNYACLDAYAAVVLHAEIGKSKDPIFCMAPS-DIPIAGTEVRLYTNNHESCVGVGQVQDEEAARSLVEKWGTDLKLAQREGTRSGGL---KRVVVKVVDVLKPASLTPHQDAPPXXXXXXGQPRVAVSMNDVHSGKGFEGFVLWDLVHVRLASDH--HPFQGIPVPAASADPDAHVDNFFDEPRPAQAVYQNDGDVESA-LGGE-----PDGSSDDDTLDESAAGVGAXX-------------------XXXXXXXXKGAASAAXXXXXXXXXXXXXXXXXXAPEEPHGVFSVR-------LDPFHTLNRISRMTKKSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGG------CVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHGLTDYRCV---------RGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADW--DSSHPVF-PEWPAAIDSVDTGERFGLERSLWG 756
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE) HSP 1 Score: 127 bits (320), Expect = 7.630e-27 Identity = 100/287 (34.84%), Postives = 145/287 (50.52%), Query Frame = 3
Query: 3684 MRLWTASAKTARLCLCLDPFHGMQRPSKLVLKSYGACGAYMARLRDAWFIVYKEDL---AGVEEALRLLGKSPEDIETKKRTDRSYFRQRCRRGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYFEGGKDDAR-SIAVCVAPMTWRDTTCTCSCWRHGAFRRGSLISSSSTTTGGTL--------RQAVKNRGLDSSFRVFYDQPVLEAVQKITSVLFGKAAYPAWHPAWVPTSAHGDTGERSWFVRNIRG 4508
M W + ++A L + LD FH +QR SKL KS+GA +MARLRDA FIV +D+ + VE+AL G +PE + K + ++F + CRR +P LL RF+ VIR +++ K+ + LLR AR A + L HI++GC++DP LY+ GK+ A + CV R T CT R+ + +S S L R AVKNRGL F+DQ +E +Q+ T+ + + P WV DTGE+S ++ G
Sbjct: 165 MDYWVGNGESA-LKVRLDIFHALQRVSKLCKKSHGAFKPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIR------QFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTRRCV-----RGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPL---FPEWVSALDAADTGEQSGLSESLWG 436
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE) HSP 1 Score: 125 bits (314), Expect = 3.640e-26 Identity = 86/191 (45.03%), Postives = 104/191 (54.45%), Query Frame = 3
Query: 3951 RGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYFEGGKDDARSIAVCVAPMTWRDTTCTCSCWRHGAFRRGSLISSSST-------TTGGTLRQAVKNRGLDSSFRVFYDQPVLEAVQKITSVLFGKAAYPAWHPAWVPTSAHGDTGERSWFVRNI 4502
R IP PAELL RFD V + L+ KKT+QPL RAEA A KRL VHI C +D +LYFE GKD + +C R T H IS LRQ++KNRGLD + FYDQP+LEA+Q++TS L+GKA Y W +PTSA+GDTGERS FVR+I
Sbjct: 206 RLIPRPAELLERFDLVNNLYGG------LIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKD---AETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQW----LPTSAYGDTGERSGFVRSI 383
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE) HSP 1 Score: 121 bits (304), Expect = 3.040e-24 Identity = 98/286 (34.27%), Postives = 142/286 (49.65%), Query Frame = 3
Query: 3684 MRLWTASAKTARLCLCLDPFHGMQRPSKLVLKSYGACGAYMARLRDAWFIVYKEDL---AGVEEALRLLGKSPEDIETKKRTDRSYFRQRCRRGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYFEGGKDDARSIAVCVAPMTWRDTTCTCSCWRHGAFRRGSLISSSSTTTGGTL--------RQAVKNRGLDSSFRVFYDQPVLEAVQKITSVLFGKAAYPAWHPAWVPTSAHGDTGERSWFVRNIRG 4508
M W + ++A L + LD FH +QR SKL KS+GA +MARLRDA FIV +D+ + VE+AL G +PE + K + ++F + CRR +P LL RF+ VIR +++ K+ + LLR AR A + L HI++GC++DP LY+ K + CV R T CT R+ + +S S L R AVKNRGL F+DQ +E +Q+ T+ + + P WV DTGE+S ++ G
Sbjct: 165 MDYWVGNGESA-LKVRLDIFHALQRVSKLCKKSHGAFRPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIR------QFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYT--KSAGITTRRCV-----RGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPL---FPEWVSALDAADTGEQSGLSESLWG 433
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG) HSP 1 Score: 120 bits (302), Expect = 4.920e-24 Identity = 87/243 (35.80%), Postives = 119/243 (48.97%), Query Frame = 3
Query: 3732 LDPFHGMQRPSKLVLKSYGACGAYMARLRDAWFIVYKEDLAGVEEALRLLGKSPEDIETKKRTDRSYFRQRCRRGIPPPAELLRRFDSVIRV*SNYTS*HNLLHKKTEQPLLRAEAR*AAKRLIVHIKAGCINDPVGASLYF-EGGKDDARSIAVCVAPMTWRDTTCTCSCWRHGAFRRGSLISSSST--------TTGGTLRQAVKNRGLDSSFRVFYDQPVLEAVQKITSVLFGKAAYPAW 4433
LD FH M R +K +LKS+GA +MARLRDA+F++ K+DL V AL+ G S ++IE KK D ++F + C R IP ELL+R+D V + +L KT +PL R+ + + L HI+ GC++D LYF EG I C R T RH SS +R AVKNRGL S + FY Q +L+ + + +S L Y AW
Sbjct: 437 LDCFHAMNRINKTLLKSHGAYKPFMARLRDAFFLISKDDLDLVVAALKTAGLSDDEIEAKKDYDWAFFLKYCHRLIPCKEELLKRYDFVCNTFQD------ILDSKTNEPLFRSNTKKEVRNLRKHIQNGCLSDVPDIPLYFLEGRTSQGLPIYRCA-----RGTNSNEGYHRHMRKLLHHYASSPMLLHLLLLEFNFRWNIRMAVKNRGLPSEYGGFYSQSLLDEINRNSSGLSVHVPYLAW 668 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig756.21.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig756.21.2 >prot_P-littoralis_Contig756.21.2 ID=prot_P-littoralis_Contig756.21.2|Name=mRNA_P-littoralis_Contig756.21.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=415bp MVEKTIFVALLLLVHGQLVVSPPAPAPAPVGRPKRKKSRPGSAKTSPPTHback to top mRNA from alignment at P-littoralis_Contig756:74361..80788+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig756.21.2 ID=mRNA_P-littoralis_Contig756.21.2|Name=mRNA_P-littoralis_Contig756.21.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6428bp|location=Sequence derived from alignment at P-littoralis_Contig756:74361..80788+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig756:74361..80788+ >mRNA_P-littoralis_Contig756.21.2 ID=mRNA_P-littoralis_Contig756.21.2|Name=mRNA_P-littoralis_Contig756.21.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1245bp|location=Sequence derived from alignment at P-littoralis_Contig756:74361..80788+ (Pylaiella littoralis U1_48)back to top |