mRNA_P-littoralis_Contig755.17.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: D7FXJ9_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ9_ECTSI) HSP 1 Score: 316 bits (810), Expect = 2.890e-103 Identity = 162/258 (62.79%), Postives = 191/258 (74.03%), Query Frame = 1
Query: 46 NAEEAKDNLRRALEASGGSTLGDEVQAAAEVLSNFNPTPSPARAWRLNSGSWTSLGQDFKGTTRTADGVECTLGRLAFNIFEPVDLLVLITDTVNVIGPREKNAAPEEETLYKICIQWVARDGSGLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLA--ERKAKQLMLKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVVTR 813
+AE AK NLR AL SGGSTL + V AA EVL+NFNPT SPA+AW L+SG W S+G+DFKGTTRT DGVECTLGRL FNIFEPV+L VLI N IG R +NA P E+ Y I +WVARDGSGL+G VE G C EDPS P+R+ V+FT G IEP EGQDLDAWRKVIG++ D G ++ PL+ + KA +LMLK FGF+GPA LGPRGELSY+MKR+P G LDI+Y+D+EMRV+RG LVVV R
Sbjct: 52 SAEAAKSNLRSALAESGGSTLAEGVGAAVEVLANFNPTSSPAKAWPLHSGEWASVGEDFKGTTRTKDGVECTLGRLVFNIFEPVNLPVLIVAIKNTIGDRPENADPAYESNYVISTRWVARDGSGLRGRVEISGTCWEDPSMPERVLVRFTKGSIEPDEGQDLDAWRKVIGVR-------DVEGTKDKGPLSTLKEKAARLMLKVVFGFQGPADGLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDR 302
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: A0A835ZKX0_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKX0_9STRA) HSP 1 Score: 156 bits (394), Expect = 5.290e-41 Identity = 103/260 (39.62%), Postives = 134/260 (51.54%), Query Frame = 1
Query: 49 AEEAKDNLRRALEASGGSTLGDEVQAAAEVLSNFNPTPSPARAWRLNSGSWTSLGQDFKGTTRTADGVECTLGRLAFNIFEPVDLLVLITDTVNVIG--PREKNAAPEEETLYKICIQWVARD---GSGLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLAERKAKQLMLKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVVTR 813
A +AK+ L + L+A+ G T D V A + LS NPT A L G++ + G +F R G ECTLGRLAFN+FEP L V IT VN + P E+ E Y + +VAR G L+G V G+C D +RLRV F G + P +GQDL W V + K E+ PL +K LMLK GF+ PA + +G Y M R P G LDILY+DD +RV+RG+ +VVV R
Sbjct: 58 ARDAKEELAKQLQANEGDTKNDAVAVAVDALSKTNPTTDGALQRELLKGAFATTGFNFPDGKRGPLGWECTLGRLAFNLFEPTKLPVSITHIVNTLEDVPAERQGDRPGELTYDLVNSFVARSPESGVELRGEVAVSGVCWPDSKDANRLRVAFGAGELRPAQGQDLAEWEAVFKPREGK--------EKPRVPLG-KKLTNLMLKLFMGFQPPADA--GQGVQRYTMNRPPEGYLDILYLDDALRVTRGNRGSIVVVER 306
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: A0A1Z4N4X8_9CYAN (PAP_fibrillin domain-containing protein n=5 Tax=Nostocales TaxID=1161 RepID=A0A1Z4N4X8_9CYAN) HSP 1 Score: 140 bits (354), Expect = 8.470e-36 Identity = 96/272 (35.29%), Postives = 144/272 (52.94%), Query Frame = 1
Query: 34 AVDTNAEEA-KDNLRRALEASGGSTLGDEVQAAAEVLSNFNPTPSPARAWRLNSGSWTSLGQ-DFKGTTRTADGVEC-TLGRLAFNIFEPVDLLVL---ITDTVNVIGPREKNAAPEEETLYKICIQWVARDGS--GLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLAERKAKQLM----LKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVVTR 813
AV+T +A K LR+AL ASGG+T EV AA E L + NP +PAR+ L +W + +F G + ADG C TLGRLAFN+F+P L V ++ V ++G E+++ + I +++ D S L G V +G+C L+V+FT G ++P + Q+L+ W+ V G Q P A R K ++ L FG P G GE+S+ M+R+P G L+ILY+D+E+R++RG E ++V R
Sbjct: 2 AVNTKTSQAAKTALRQALAASGGNTKDKEVIAAIENLQSLNPITAPARSDTLLDSNWLLISAPNFPGGEQLADGSFCYTLGRLAFNMFQPTGLKVTLQRVSQPVFLLGNGEQHS-------HDIVVEFTTIDESVPKLSGIVRNQGVCQV--VSDTTLQVEFTGGILQPQDNQNLEEWKAVFGNQQPS---------------ARRSFKDILMSGFLNLMFGLVPPQGMDADTGEISFTMRRSPKGRLEILYVDEELRITRGEREAILVSER 249
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: UPI001686A008 (fimbrial protein n=1 Tax=Richelia sinica TaxID=1357545 RepID=UPI001686A008) HSP 1 Score: 134 bits (337), Expect = 2.520e-33 Identity = 92/264 (34.85%), Postives = 138/264 (52.27%), Query Frame = 1
Query: 37 VDT-NAEEAKDNLRRALEASGGSTLGDEVQAAAEVLSNFNPTPSPARAWRLNSGSWTSLGQ-DFKGTTRTADG-VECTLGRLAFNIFEPVDLLVLITDTVNVIGPREKNAAPEEETLYKICIQWVARDGS--GLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLAERKAKQLMLKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVVTR 813
VDT N AK LR+AL A GG+T + V AA L NPTP+P + +L +W + F + ADG TLGRLAFN+F+P L V+I + + E+ + I +++ D S L+G V G+C P+ L+V+FT G + P + ++ WR+V G Q G+ E++ L E K + +LK FG P G GE+ + MKR+P G+L+ILY+D+E+R++RG ++V R
Sbjct: 3 VDTGNVAAAKAALRQALTACGGNTKDETVLAAITNLQTLNPTPAPTHSGQLLDSNWLLISAPSFPQGEQLADGRFAYTLGRLAFNMFQPTKLRVVIDRVFQPV----RYLGQGEQQSHDIVVEFTTIDESVPQLRGIVRNLGVCQ--PASDTALQVQFTGGVLTPQDMGQIEEWRRVFGEQ----------GKPEETSLKE-KFQTWLLKLMFGLVPPEGMNLDTGEIRFTMKRSPKGNLEILYLDEELRITRGEKGTVLVCER 249
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: A0A6B3MA84_9CYAN (Fimbrial protein n=1 Tax=Symploca sp. SIO2E9 TaxID=2607812 RepID=A0A6B3MA84_9CYAN) HSP 1 Score: 132 bits (331), Expect = 1.910e-32 Identity = 92/264 (34.85%), Postives = 135/264 (51.14%), Query Frame = 1
Query: 37 VDTN-AEEAKDNLRRALEASGGSTLGDEVQAAAEVLSNFNPTPSPARAWRLNSGSWTSLGQ-DFKGTTRTADG-VECTLGRLAFNIFEPVDLLVLITDTVNVIGPREKNAAPEEETLYKICIQWVARDGS--GLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLAERKAKQLMLKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVVTR 813
VDT E AK LR+AL ASGG+T + V AA + L+ NPT +PAR+ L W + +F G + DG TLGRLAFN+F+P L ++I + + E +++ + I +++ D S L G V+ +G+C P L+VKFT G + P EG ++ W+ V G Q G + + K K FG P GE+S+ M R+P GSL+ILY+D E+R++RG+ L+V R
Sbjct: 4 VDTRKCEAAKIALRQALAASGGNTKDEAVIAAIDNLTQLNPTTAPARSETLLDSQWLLINAPNFPGGKQLPDGKFTYTLGRLAFNMFQPTQLKLVIDRVLQPVRLLEN----KQQRSHDIVVEFTTIDESFPKLSGIVKNQGVCH--PISDTLLQVKFTGGTLAPQEGMNIKDWQAVFGKQHQPGKKS-----------WQEKLMSGFFKLIFGLVPPKAMNPDTGEVSFTMNRSPRGSLEILYLDQELRITRGNKGTLLVSER 250
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: UPI00146A6814 (fimbrial protein n=1 Tax=Nodosilinea sp. P-1105 TaxID=2546229 RepID=UPI00146A6814) HSP 1 Score: 130 bits (328), Expect = 5.890e-32 Identity = 88/257 (34.24%), Postives = 130/257 (50.58%), Query Frame = 1
Query: 52 EEAKDNLRRALEASGGSTLGDEVQAAAEVLSNFNPTPSPARAWRLNSGSWTSLGQ-DFKGTTRTADGV-ECTLGRLAFNIFEPVDLLVLITDTVNVIGPREKNAAPEEETLYKICIQWVARDGS-GLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLAERKAKQLMLKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVVTR 813
++AK L +AL+A GG+ V AA L+ NPTP+PA+A G W + F G ADG TLGRLAFN+F+P L ++I + P A + I + + D L+G V G+C P+ ++L+V+FT G +EP D D W +V G D DAS P + + + L+LK FG P G + +QM+R+P G L+ILY+DD++R++RG ++V R
Sbjct: 15 QQAKAALYQALQAHGGNPAQAPVAAAIARLATLNPTPAPAQATDRLEGDWRLISAPSFPGGELLADGCYSYTLGRLAFNMFQPQTLKLVIDQVSQPVWPIADGA----HHTHDIVVDFTTLDLEVPLQGRVRNLGICQ--PATANQLQVQFTGGVLEPAVDSDRDHWHQVFG-------DPDASPR----PGLKARLQGLVLKLMFGLVPPKAMAADTGRIEFQMRRSPKGRLEILYLDDDLRITRGEKGTILVCDR 254
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: A0A6B3N4N3_9CYAN (Fimbrial protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6B3N4N3_9CYAN) HSP 1 Score: 130 bits (327), Expect = 7.250e-32 Identity = 89/267 (33.33%), Postives = 135/267 (50.56%), Query Frame = 1
Query: 52 EEAKDNLRRALEASGGSTLGDEVQAAAEVLSNFNPTPSPARAWRLNSGSWTSLGQ-DFKGTTRTADG-VECTLGRLAFNIFEPVDLLVLITDTVNVIGPREKNAAPEEETLYKICIQWVARDGS--GLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLAERKAKQLMLKEKF---------GFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVVTR 813
E AK LR+AL A+GG+T + V AA + L+ NPT +PAR+ L W + +F G + DG TLGRLAFN+F+P L ++I + + E +++ + I +++ D S L G V +G+C P +L+VKFT G + P EG ++ W++V G Q R++ Q +E+F G P GE+S+ M R+P GSL+ILY+D+EMR++RG L+V R
Sbjct: 10 ETAKTALRQALAANGGNTKDEAVIAAIDNLTQLNPTTAPARSETLLDSEWLLINAPNFPGGKQLPDGKFTYTLGRLAFNMFQPTQLKLVIDRVLQPVRLLEN----KQQRSHDIVVEFTTIDESFPKLTGIVHNQGVCH--PISDTKLQVKFTGGTLAPQEGTNIKDWQEVFGKQ--------------------RQSSQKSWQERFISGFFRLMFGLVPPQAMNPDTGEVSFTMNRSPKGSLEILYLDEEMRITRGEKGTLLVCQR 250
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: A0A352ALH8_9CYAN (Fimbrial protein n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352ALH8_9CYAN) HSP 1 Score: 130 bits (327), Expect = 7.440e-32 Identity = 88/266 (33.08%), Postives = 137/266 (51.50%), Query Frame = 1
Query: 37 VDTNAEE---AKDNLRRALEASGGSTLGDEVQAAAEVLSNFNPTPSPARAWRLNSGSWTSLGQ-DFKGTTRTADGVEC-TLGRLAFNIFEPVDLLVLITDTVNVIGPREKNAAPEEETLYKICIQWVARDGS--GLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLAERKAK--QLMLKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVV 807
+D+ A+E AK L AL GG T + V A E L + NPTP+PAR L G W + +F ADG TLGRLAFNIF+P L ++I + + P + + + I +++ D + L+G V +G+CS P + L+V+FT G + P + + +AW + G Q+ SP K K L+L+ FG P G G +S++M+R+P G L +LY+D+++R++RG +G+V+V
Sbjct: 1 MDSQAQERKTAKTRLTEALNTYGGDTKHESVATAIECLVSLNPTPAPARCEALRDGQWLLISAPNFPDGELRADGKYVYTLGRLAFNIFQPTSLKIVIDRVIQPVFPISQTG----KQTHDIIVEFTTADENITPLQGIVYNKGICS--PVNGNILQVQFTGGELVPRDQTNREAWNAIFGEQAK-------------SPTIGLKQKLMTLILRMIFGIVPPQGMEAETGRVSFKMQRSPKGKLKLLYLDEDLRITRGE-QGMVLV 246
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: UPI00168986C2 (Fimbrial protein n=3 Tax=Pseudanabaenales TaxID=2881377 RepID=UPI00168986C2) HSP 1 Score: 128 bits (322), Expect = 4.230e-31 Identity = 89/255 (34.90%), Postives = 127/255 (49.80%), Query Frame = 1
Query: 61 KDNLRRALEASGGSTLGDEVQAAAEVLSNFNPTPSPARAWRLNSGSWTSLGQD-FKGTTRTADGVEC-TLGRLAFNIFEPVDLLVLITDTVNVIGPREKNAAPEEETLYKICIQWVAR--DGSGLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLAERKAKQLMLKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVVTR 813
KDNLR AL G V E L+ NPTP P + +L G+W + F R ADG C TLGRLAFN+F+P DL V+I + P E+ P + T + I + +V + L+G V G+C P+ L+V+FT G +EP DL W + ++ K + S + + QL LK FG P G + +QM+R+P GSL ILY+D+E+R++RG E ++V R
Sbjct: 17 KDNLRAALTTHDGDPRHPSVIEIIENLATLNPTPVPTQTSQLLDGNWQLISAPIFPDGKRLADGTYCYTLGRLAFNMFQPQDLTVVIQQVFQPVLPMEE---PMQRT-HDIVVDFVIAHPNNPSLRGTVRNLGICK--PASDTVLQVQFTGGVLEPAADTDLQQWNAIF--ENSKAPTH--------SSIKDWVQSQL-LKLMFGLVPPKEINKETGRIEFQMRRSPKGSLTILYLDEELRITRGQRETVLVCER 254
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Match: A0A6H5JYC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC1_9PHAE) HSP 1 Score: 125 bits (313), Expect = 4.940e-31 Identity = 78/184 (42.39%), Postives = 101/184 (54.89%), Query Frame = 1
Query: 328 NVIGPREKNAAPEEETLYKICIQWVARDGSGLKGFVEARGLCSEDPSKPDRLRVKFTYGFIEPGEGQDLDAWRKVIGLQSPKGADNDASGEEEDSPLAERKAKQLMLKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEGLVVVTRD*HISYIIAVVCHSRRISADLC 879
N G R + A P E+ Y I WVARDG+GL+G VE + TY EGQDLDAWR VIG++ D + + E+ + + KA +LMLK FGF GPA +LG RGELS +MKR+PSG ++LY+D+E+ V+RG LVVVTR V+ R S D C
Sbjct: 3 NTCGDRPEPADPAYESPYDISTHWVARDGNGLRGRVE----------------IAETY------EGQDLDAWRNVIGVR-----DTEGTKEKGRLSMLKEKAAKLMLKVVFGFRGPADNLGRRGELSCEMKRSPSGHFEVLYLDEEIWVTRGHKGTLVVVTR---------VLFFYRLSSGDFC 150 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig755.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig755.17.1 >prot_P-littoralis_Contig755.17.1 ID=prot_P-littoralis_Contig755.17.1|Name=mRNA_P-littoralis_Contig755.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=59bp MLKEKFGFEGPAGSLGPRGELSYQMKRAPSGSLDILYIDDEMRVSRGSSEback to top mRNA from alignment at P-littoralis_Contig755:68854..73575- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig755.17.1 ID=mRNA_P-littoralis_Contig755.17.1|Name=mRNA_P-littoralis_Contig755.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4722bp|location=Sequence derived from alignment at P-littoralis_Contig755:68854..73575- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig755:68854..73575- >mRNA_P-littoralis_Contig755.17.1 ID=mRNA_P-littoralis_Contig755.17.1|Name=mRNA_P-littoralis_Contig755.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=177bp|location=Sequence derived from alignment at P-littoralis_Contig755:68854..73575- (Pylaiella littoralis U1_48)back to top |