mRNA_P-littoralis_Contig755.16.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5KGF6_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF6_9PHAE) HSP 1 Score: 167 bits (423), Expect = 3.520e-49 Identity = 86/157 (54.78%), Postives = 111/157 (70.70%), Query Frame = 1
Query: 1 KEYRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVARMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGDLSETRRRKRERDA 468
+ Y KL H FL RCIGW KR+R+DRPLSYA+ALI AGC E++EAT+RKRRLCFAGFV RM D RLPK LLG + GG Y GGQE DW+ R+ EDL AF++ +K+ G W+ SAK + WY++V+D A F +W ++E + S +R RE +A
Sbjct: 36 EHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKHMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVEDVATWFMRKWHRQEAETSAKHQRAREAEA 192
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5JX67_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX67_9PHAE) HSP 1 Score: 164 bits (416), Expect = 5.210e-49 Identity = 83/147 (56.46%), Postives = 105/147 (71.43%), Query Frame = 1
Query: 7 YRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVARMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGDLSETR 444
Y KL H FL RCIGW KR+R+DRPLS+A+ALI AGC E++EAT+RKRRLCFAGFV RM D RLPK LLG + GG Y GGQE DW+ R+ E L AF++ DK+ G W+ SAK + WY++V+DGA F +W ++E + S R
Sbjct: 11 YTKLNGTHRQFLTRCIGWSKRKRSDRPLSHAQALIQAGCEETIEATVRKRRLCFAGFVTRMEDNRLPKRMLLGAMAGGVGYRGGQERDWVSRLGEGLVAFNMGDDKEGGKWKESAKDPEVWYNKVEDGAAWFMRKWHRQEAEASAKR 157
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5K1C5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C5_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.070e-48 Identity = 82/143 (57.34%), Postives = 106/143 (74.13%), Query Frame = 1
Query: 13 KLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVARMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGDLSE 438
KL HH FL RCIGW KR+R+DRPLSYA+ALI AGC E++EAT+RKRRLCFAGFV RM D RLP LLG + GG Y GGQE DW+ R+ EDL AF++ +K+ G W+ SAK ++ WY++V+DGA F +W ++E + +E
Sbjct: 125 KLNGTHHQFLSRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPTRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEAEATE 267
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5KSH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH7_9PHAE) HSP 1 Score: 167 bits (424), Expect = 2.670e-48 Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = 1
Query: 1 KEYRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVARMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGD 429
+ Y KL H FL RCIGW KR+R+DRPLSYA+ALI AGC E++EAT+RKRRLCFAGFV RM D RLPK LLG + GG Y GGQE DW+ R+ EDL AF + +K+ G W+ SAK + WYD+++DGA F +W ++E +
Sbjct: 121 EHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQEAE 264
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5LD24_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD24_9PHAE) HSP 1 Score: 171 bits (434), Expect = 4.780e-48 Identity = 86/153 (56.21%), Postives = 109/153 (71.24%), Query Frame = 1
Query: 1 KEYRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVARMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGDLSETRRRKR 456
+ Y KL H FL RCIGW KR+R+DRPLSYA+ALI AGC E++EAT+RKRRLCFAGFV RM D RLPK LLG + GG Y GGQE DW+ R+ EDL AF + +K+ G W+ SAK + WYD+++DGA F +W ++E + S R+R R
Sbjct: 330 EHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQEAEASAKRQRAR 482
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5KB07_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB07_9PHAE) HSP 1 Score: 167 bits (424), Expect = 5.080e-48 Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = 1
Query: 1 KEYRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVARMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGD 429
+ Y KL H FL RCIGW KR+R+DRPLSYA+ALI AGC E++EAT+RKRRLCFAGFV RM D RLPK LLG + GG Y GGQE DW+ R+ EDL AF + +K+ G W+ SAK + WYD+++DGA F +W ++E +
Sbjct: 151 EHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQEAE 294
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5KU62_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU62_9PHAE) HSP 1 Score: 170 bits (430), Expect = 9.170e-48 Identity = 85/154 (55.19%), Postives = 111/154 (72.08%), Query Frame = 1
Query: 1 KEYRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVARMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGDLSETRRRKRE 459
+ Y KL H FL RCIGW KR+R+DRPLSYA+ALI AGC E++EAT+R+RRLCF GFV RM D RLPK LLG + GG Y GGQE DW+ R+ EDL AF++ +K+ G W+ SAK ++ WY++V+DGA F +W ++E + S R+R RE
Sbjct: 287 EHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRQRRLCFGGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEAEASAKRQRARE 440
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5L2N2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2N2_9PHAE) HSP 1 Score: 169 bits (428), Expect = 9.920e-48 Identity = 86/157 (54.78%), Postives = 112/157 (71.34%), Query Frame = 1
Query: 1 KEYRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVARMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGDLSETRRRKRERDA 468
+ Y KL H FL RCIGW KR+R+DRPLSYA+ALI AGC E++EAT+RKRRLCFAGFV RM D RLPK L + GG Y GGQE DW+ R+ EDL AF++ +K+ G W+ SAK ++ WY++V+DGA F +W ++E + S R+R RE +A
Sbjct: 259 EHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKCMPLEAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEAEASAKRQRARETEA 415
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5JYX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX0_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.320e-47 Identity = 85/158 (53.80%), Postives = 112/158 (70.89%), Query Frame = 1
Query: 1 KEYRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVA-RMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGDLSETRRRKRERDA 468
++Y KL H L RCIGW KR+R+DRPLSYA+ALI AGC E++EAT+RKRRLCFAGFV RM D RLPK LLG + GG Y GGQE DW+ R+ EDL AF++ +K+ G W+ SAK + WY++++DGA +W ++E + S R+R RE +A
Sbjct: 34 EQYTKLNGTHLQVLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVVVRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKGPEVWYNKIEDGAAWLMRKWHRQEAEASAKRQRARETEA 191
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Match: A0A6H5L5T8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T8_9PHAE) HSP 1 Score: 167 bits (424), Expect = 4.020e-47 Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = 1
Query: 1 KEYRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRKRRLCFAGFVARMRDERLPKIALLGELQGGARYLGGQEFDWLRRMREDLEAFDIVVDKKEG-WEASAKRADEWYDRVDDGARRFTDEWLKKEGD 429
+ Y KL H FL RCIGW KR+R+DRPLSYA+ALI AGC E++EAT+RKRRLCFAGFV RM D RLPK LLG + GG Y GGQE DW+ R+ EDL AF + +K+ G W+ SAK + WYD+++DGA F +W ++E +
Sbjct: 241 EHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQEAE 384 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig755.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig755.16.1 >prot_P-littoralis_Contig755.16.1 ID=prot_P-littoralis_Contig755.16.1|Name=mRNA_P-littoralis_Contig755.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=162bp KEYRKLRSAHHFFLLRCIGWKKRERTDRPLSYAKALITAGCNESVEATLRback to top mRNA from alignment at P-littoralis_Contig755:45280..45765- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig755.16.1 ID=mRNA_P-littoralis_Contig755.16.1|Name=mRNA_P-littoralis_Contig755.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=486bp|location=Sequence derived from alignment at P-littoralis_Contig755:45280..45765- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig755:45280..45765- >mRNA_P-littoralis_Contig755.16.1 ID=mRNA_P-littoralis_Contig755.16.1|Name=mRNA_P-littoralis_Contig755.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=486bp|location=Sequence derived from alignment at P-littoralis_Contig755:45280..45765- (Pylaiella littoralis U1_48)back to top |