mRNA_P-littoralis_Contig75.88.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig75.88.1
Unique NamemRNA_P-littoralis_Contig75.88.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: D8LF06_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF06_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 6.100e-129
Identity = 195/218 (89.45%), Postives = 204/218 (93.58%), Query Frame = 2 
Query:  104 MDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIKIVRAPPAPDLGTAAATAEVAAVPAQG 757
            MDTLLGIAGEGFVVLAADAQVARSILLYK+  DKIAHLA+NKALACAGPQSDCVSFTEY+SKNM LYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKR  GKD+ASLFWLDYLGT+QKVPYGAHGYGAAFTLSVMDREY+KGLSLDEAL II+ CI ELHTRFLIAQKNFVIKVVTAEGIK+VR PP PDLG A A+AE AAVP QG
Sbjct:    1 MDTLLGIAGEGFVVLAADAQVARSILLYKNNMDKIAHLADNKALACAGPQSDCVSFTEYISKNMALYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKREAGKDEASLFWLDYLGTLQKVPYGAHGYGAAFTLSVMDREYVKGLSLDEALGIIDNCIKELHTRFLIAQKNFVIKVVTAEGIKVVRGPPTPDLGAAGASAEAAAVPVQG 218
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BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: A0A836CPT6_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPT6_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.680e-72
Identity = 120/195 (61.54%), Postives = 151/195 (77.44%), Query Frame = 2 
Query:  104 MDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIKIVR 688
            MD+L G+AG+GFVVLAADAQVARSILLY++  DKI  L  +K +A AGPQ+DC  F EY+ KNM LYELNND++L+TKAAA +IR ELA ALRKGP+Q  +LMGGVD        A+L+WLDYLGT+Q V YGA GYGAAFTLS++DR Y  G++  +A+ ++  CI  LH RFLIAQ NFVIKVV  +GI++++
Sbjct:    1 MDSLFGVAGDGFVVLAADAQVARSILLYQNDLDKIKELDSHKMMALAGPQADCNLFGEYIQKNMALYELNNDLRLSTKAAANYIRRELATALRKGPYQVNMLMGGVDAGA-----AALYWLDYLGTLQPVKYGAQGYGAAFTLSLLDRSYRVGMAEADAVELVRSCIAALHKRFLIAQPNFVIKVVDKDGIRVLK 190
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BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: A0A6U4C0Y9_9STRA (Proteasome subunit beta n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4C0Y9_9STRA)

HSP 1 Score: 225 bits (573), Expect = 5.930e-66
Identity = 111/213 (52.11%), Postives = 153/213 (71.83%), Query Frame = 2 
Query:   47 RTNRSAFGPSSSSREEDDTMDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIKIV 685
            R + +AFG S +      TMD+ +G+ G+GFV+LAADA   RSIL+YK   DKI  ++EN+ +A  GPQ+DC  F EY+ KNM LYEL N + L+T  AA FIRGELAKALR+GP+Q  LL+GG  K     ++ASLFW+DYLGT+QKV YGAHGY + F LS++D  + KGL+ ++A+ ++ KCI EL TRF+IA   + +KVV +EG++++
Sbjct:   30 RADCAAFGSSQAF-----TMDSTIGMRGDGFVLLAADANAGRSILIYKQDLDKILPISENQIMATVGPQADCSVFGEYIQKNMRLYELENQINLSTFGAANFIRGELAKALRRGPYQVNLLLGGAAK----DEEASLFWMDYLGTLQKVNYGAHGYASNFVLSLLDAHWEKGLTEEQAIEVLRKCIKELETRFMIALPKWSVKVVDSEGVRVI 233
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BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: W7TFQ9_9STRA (Proteasome subunit beta n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFQ9_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.530e-65
Identity = 114/192 (59.38%), Postives = 145/192 (75.52%), Query Frame = 2 
Query:  104 MDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIK 679
            MDTLLGI G+GFV++AADA  ARSIL++K  QDKIA L  +K LA AGP +DC + TEYV KNM LYE NND+KL T AAA FIR  LA ALRKGP+QT LL+GG D+    KD A+L++LDYLG+MQKV +GA GY + FTLS+ DREY +G++L EA  ++EK   EL  RFLI+Q  +++KVV  +G++
Sbjct:   45 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAALDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDE----KDGAALYFLDYLGSMQKVNFGAQGYASNFTLSIFDREYREGMTLPEAEVVLEKAKKELAVRFLISQPKWIMKVVDKDGVR 232
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BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: K8ZB45_NANGC (Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZB45_NANGC)

HSP 1 Score: 224 bits (570), Expect = 7.430e-64
Identity = 114/192 (59.38%), Postives = 145/192 (75.52%), Query Frame = 2 
Query:  104 MDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIK 679
            MDTLLGI G+GFV++AADA  ARSIL++K  QDKIA L  +K LA AGP +DC + TEYV KNM LYE NND+KL T AAA FIR  LA ALRKGP+QT LL+GG D+    KD A+L++LDYLG+MQKV +GA GY + FTLS+ DREY +G++L EA  ++EK   EL  RFLI+Q  +++KVV  +G++
Sbjct:  173 MDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAALDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDE----KDGAALYFLDYLGSMQKVNFGAQGYASNFTLSIFDREYREGMTLPEAEVVLEKAKKELAVRFLISQPKWIMKVVDKDGVR 360
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BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: A0A7S2XJE8_9STRA (Proteasome subunit beta n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJE8_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.590e-63
Identity = 109/194 (56.19%), Postives = 143/194 (73.71%), Query Frame = 2 
Query:  104 MDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNND-VKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIKI 682
            MDT+ G++ EG VV+AAD   ARSIL Y+   DK+  L+ + A+  AGP SD V+FT+Y++KN  LYEL+ND ++L+T A A F RGELA ALRKGPFQ  +L+GG D+   G    SL++LDY+G MQKVPYG  GY  AF LSVMDR++ KGL   EA++I+EKCI EL TRFLI+Q NF+IKV+  +G+K+
Sbjct:    1 MDTVFGVSYEGGVVIAADQSNARSILTYQSNLDKVTELSSHSAMGVAGPNSDLVNFTQYIAKNFKLYELSNDGMQLSTAAQANFCRGELATALRKGPFQVNVLLGGFDEGVGG----SLYFLDYMGAMQKVPYGCQGYAGAFCLSVMDRQWTKGLDEAEAVAIVEKCIQELKTRFLISQPNFMIKVINKDGVKV 190
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BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: A0A6V1PTT6_HETAK (Proteasome subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PTT6_HETAK)

HSP 1 Score: 214 bits (544), Expect = 2.560e-62
Identity = 110/192 (57.29%), Postives = 136/192 (70.83%), Query Frame = 2 
Query:  104 MDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIK 679
            MD L G+ G+G+V+LAADA   RSI++YK   DKI  L  NK LA AGP +D V+F EY+ KN+ LYEL ND+KL T A A FIR  LA ALRKGP+QT LL+GG D   EGKD   L+W+DYLG M K+ +GAHGYG++FTLS+ D E+ +GLS  E L II  CI EL TRFLI+   FV K+V A G++
Sbjct:    1 MDALFGLKGDGYVMLAADANQGRSIIVYKSDYDKIMPLDSNKLLAQAGPNADTVNFGEYIQKNLALYELTNDLKLNTSATAHFIRRTLADALRKGPYQTNLLLGGKD---EGKDP-ELYWMDYLGAMHKLNFGAHGYGSSFTLSIFDSEWREGLSEAEGLEIIRHCIAELRTRFLISMPKFVCKIVDANGMR 188
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BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: A0A7S2FKQ2_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKQ2_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.090e-61
Identity = 104/197 (52.79%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  101 TMDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIKIVRA 691
            TMDT+LGI G+GF ++ AD   ARSI+++   +DKI  L  +K +  +GPQ D  +F EY+ KNMTLYELNND+KL+T A A F+R +LA ALRKGP+QT +L+GG D   EG   ASL++LD    +  V +GAHGY + F LS+ DREY +G+S++EA ++I+KCI ELHTRFLI+Q NF+IK+V  +G++++ A
Sbjct:   24 TMDTVLGIKGDGFTMIVADRTSARSIMVFNQAEDKITELDSHKIIGQSGPQCDTANFAEYIQKNMTLYELNNDMKLSTFATANFMRRQLATALRKGPYQTNILLGGYD---EGAG-ASLYFLDLYSALTPVNFGAHGYASNFCLSIFDREYKEGMSVEEAKAVIDKCIAELHTRFLISQPNFLIKIVDKDGVRVMEA 216
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BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: B7FVS5_PHATC (Proteasome subunit beta n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVS5_PHATC)

HSP 1 Score: 210 bits (534), Expect = 9.350e-61
Identity = 103/193 (53.37%), Postives = 140/193 (72.54%), Query Frame = 2 
Query:  104 MDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIKI 682
            MDT+ G+  EG V+LAAD   ARSILLY+   DK+  L  + A+  +GP  D V+F E+V+KN+ LYEL+ND+KL+T A A F RGELA ALRKGPFQ   L+GG D +      ASL++LDY+  +QKV YG+ GY + F LS+MD+EY   L+  +A+ I+E+CI+ELHTRFLI+QKNF+IKVV  +G+++
Sbjct:    1 MDTVFGVQYEGGVILAADQSNARSILLYQTNLDKVKELTSHSAMGVSGPNCDMVNFCEFVAKNIKLYELSNDIKLSTHAQANFARGELATALRKGPFQVNTLLGGFDNKV----GASLYYLDYMAALQKVNYGSQGYASNFCLSIMDKEYRDDLNEADAVKIVEQCIHELHTRFLISQKNFIIKVVDKDGVRL 189
[Close]
BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Match: A0A7S2XZZ5_9STRA (Proteasome subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZZ5_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.830e-60
Identity = 102/198 (51.52%), Postives = 143/198 (72.22%), Query Frame = 2 
Query:  104 MDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQSDCVSFTEYVSKNMTLYELNND-VKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKRTEGKDDAS-----LFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREYIKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIK 679
            MDT++G+ G GFV++AADA   RSIL++KD  DK+  +  NK L  AGPQ+DC +F+EY+ KNM LY LNN+ + L T AAA FIRGE+A ALR+GP+Q  +L+GGVD   +G  D+      LF++DYL +   V +G HGYG++F LS++DR + + L+ +EA+ I++KCI+EL  RFLI+Q  F IK+VTA+G K
Sbjct:    1 MDTVVGLVGNGFVLVAADAMSGRSILIFKDDYDKVKEMDPNKLLGLAGPQADCENFSEYIQKNMELYRLNNNGLTLGTHAAANFIRGEMAYALRRGPYQCNMLLGGVDPPAKGSTDSEPAKPQLFFIDYLASCHPVNFGCHGYGSSFLLSILDRCWKEDLTQEEAIDIVKKCIHELEVRFLISQPKFTIKIVTADGTK 198
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.88.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF06_ECTSI6.100e-12989.45Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A836CPT6_9STRA1.680e-7261.54Proteasome subunit beta n=1 Tax=Tribonema minus Ta... [more]
A0A6U4C0Y9_9STRA5.930e-6652.11Proteasome subunit beta n=2 Tax=Phaeomonas parva T... [more]
W7TFQ9_9STRA1.530e-6559.38Proteasome subunit beta n=1 Tax=Nannochloropsis ga... [more]
K8ZB45_NANGC7.430e-6459.38Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S2XJE8_9STRA1.590e-6356.19Proteasome subunit beta n=1 Tax=Attheya septentrio... [more]
A0A6V1PTT6_HETAK2.560e-6257.29Proteasome subunit beta n=1 Tax=Heterosigma akashi... [more]
A0A7S2FKQ2_9STRA1.090e-6152.79Proteasome subunit beta n=1 Tax=Florenciella parvu... [more]
B7FVS5_PHATC9.350e-6153.37Proteasome subunit beta n=2 Tax=Phaeodactylum tric... [more]
A0A7S2XZZ5_9STRA2.830e-6051.52Proteasome subunit beta n=1 Tax=Fibrocapsa japonic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:308089..314852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LF06
Preferred namePSMB2
PFAMsProteasome
Model size1867
Max annot lvl2759|Eukaryota
KEGG koko:K02734,ko:K08471,ko:K12847,ko:K18626
KEGG Pathwayko03040,ko03050,map03040,map03050
KEGG ModuleM00337,M00340,M00354
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000502,GO:0003674,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009893,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010499,GO:0010564,GO:0010604,GO:0010638,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0014070,GO:0016020,GO:0016504,GO:0016579,GO:0019222,GO:0019538,GO:0019774,GO:0019941,GO:0030071,GO:0030162,GO:0030163,GO:0030234,GO:0031090,GO:0031323,GO:0031325,GO:0031331,GO:0031597,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032436,GO:0032501,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048046,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060255,GO:0061133,GO:0061134,GO:0061135,GO:0062033,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0080090,GO:0090068,GO:0098588,GO:0098772,GO:0098805,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
Exons5
Evalue8.85e-136
EggNOG OGsCOG0638@1|root,KOG0177@2759|Eukaryota
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-21_006230.1
EC3.4.25.1
Descriptionthreonine-type endopeptidase activity
Cds size657
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko03051,ko04030,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.88.1prot_P-littoralis_Contig75.88.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig75 309196..314749 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791548.4693701-UTR-P-littoralis_Contig75:308088..3091951680791548.4693701-UTR-P-littoralis_Contig75:308088..309195Pylaiella littoralis U1_48UTRP-littoralis_Contig75 308089..309195 -
1680791548.5449853-UTR-P-littoralis_Contig75:314749..3148521680791548.5449853-UTR-P-littoralis_Contig75:314749..314852Pylaiella littoralis U1_48UTRP-littoralis_Contig75 314750..314852 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791548.4845772-CDS-P-littoralis_Contig75:309195..3093001680791548.4845772-CDS-P-littoralis_Contig75:309195..309300Pylaiella littoralis U1_48CDSP-littoralis_Contig75 309196..309300 -
1680791548.4942744-CDS-P-littoralis_Contig75:310190..3103551680791548.4942744-CDS-P-littoralis_Contig75:310190..310355Pylaiella littoralis U1_48CDSP-littoralis_Contig75 310191..310355 -
1680791548.508871-CDS-P-littoralis_Contig75:311493..3116191680791548.508871-CDS-P-littoralis_Contig75:311493..311619Pylaiella littoralis U1_48CDSP-littoralis_Contig75 311494..311619 -
1680791548.5205758-CDS-P-littoralis_Contig75:312081..3123101680791548.5205758-CDS-P-littoralis_Contig75:312081..312310Pylaiella littoralis U1_48CDSP-littoralis_Contig75 312082..312310 -
1680791548.532139-CDS-P-littoralis_Contig75:314717..3147491680791548.532139-CDS-P-littoralis_Contig75:314717..314749Pylaiella littoralis U1_48CDSP-littoralis_Contig75 314718..314749 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig75.88.1

>prot_P-littoralis_Contig75.88.1 ID=prot_P-littoralis_Contig75.88.1|Name=mRNA_P-littoralis_Contig75.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp
MDTLLGIAGEGFVVLAADAQVARSILLYKDTQDKIAHLAENKALACAGPQ
SDCVSFTEYVSKNMTLYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQ
LLMGGVDKRTEGKDDASLFWLDYLGTMQKVPYGAHGYGAAFTLSVMDREY
IKGLSLDEALSIIEKCINELHTRFLIAQKNFVIKVVTAEGIKIVRAPPAP
DLGTAAATAEVAAVPAQG*
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mRNA from alignment at P-littoralis_Contig75:308089..314852-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig75.88.1 ID=mRNA_P-littoralis_Contig75.88.1|Name=mRNA_P-littoralis_Contig75.88.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6764bp|location=Sequence derived from alignment at P-littoralis_Contig75:308089..314852- (Pylaiella littoralis U1_48)
AGTCGCTTTCTGAAGGAGAACAAAGAGAGAGACAGAGAGACAGGAACGCA
CCAACCGCTCGGCTTTCGGACCCAGCAGCAGCAGCAGAGAGGAGGACGAC
ACTATGGACACACTGCTAGGCATCGCCGGAGAAGGGTGAGCCACGCTGGA
ACAACCTGCAACTGGTAACCAAAGCACGAAGATCCTTTGCTTCATATCCC
CTCCGCCTGCCTGCACCTCATTGCGACTGCTGTTGTGGAATGGGTGCTTT
ATTCAGGATGAATACTTGCAGTAATCTTCACTGCTGTCTTTTCCAAAATC
TTCAGCCTCTTCTTGGACAGATTCAGCACCGTTCTCCCTTCGGAGGCGGC
ATGTCGTGGGGAAGACACGGGTGACGACCGTTTGCAACGGTTCATAAGAG
CCCGCTATGAAACCATTTGCCAGCTCGCGACTCTGTTTCCCTAGGGTATA
TTCCCACCCCCTGTGATGCTATCTTCTTATATTAACATTACATACGAAGT
ACTTGTATTACTTATCATAGACTTCGTACGTCTTGTATAATGGGCCTTAA
AGATACTTTTGTATGATATGATACGAGTACAGTTCAGTATCACGAAGGAC
TGCTGTGTGGGAGCGTGGATAGAGACCTCGCACTCCGAGGCAAGGGCGGC
CGGCAACTCCACCGACGGAATCCCGACGTGTTCACAGTTGTCTTGTCTAC
GCAGCAGGCAGTCTACGCTGATCATCCATGATAATAATACTGCTGTGTGT
CATGAGAAAATTTACGAAATGATATAATTGGGAGAACTTCCAACAATCCG
CTTCCCCCCCGAACATCGAAGGATGCCACCAGACGGATTCTGTATAGTCT
TGCCGCAGATGTGCTCGTACCTGATTTCGTATCATATAACGTCAAGGGGT
GTCGAGGAGTGTGTGTGTGAAGGTGAAGTCAAAGTCCAGTCTAGACAAAT
CAACCGTACGGGTACTTGATGTGTTTTTTTTTTAGGTGTCTTGTCGTAAT
ACAGCAGTAGTACCGGCCCACTCATAAGAAGCACCTATTCTGAGCGAGGT
TCAAAACCTTCTCTTGTCCCACGACCAAGCACAGGCTGTTTCTTAGCCAA
TATATAGGATTTAAGTGTGGCGTCTGCCGCTGAGCTCAATTTCGTAGGCC
GAATTCCTTACTTTTTTTAGAATCTGAGGCTGGTTTCTTACGAAGATGTT
TCTGATGAGTGGGACGGTACTGCTGTATAATATTAGACTTTGACTTGAAG
GTGACGTAGGGTAACGCTACATGTACTCCGCTGTGTAGTGCTGTGGTACT
AGGTGTATGGCTTGACAACTTCTTGCCGCGAACCAAACGCCACACCAGAC
TCGACCCAGGGGCAAGCGACCTTCTCTTCGGTAGACTCCGAGGGCGGGGG
GGAAGGGGGGGGGGCGGGATCACGAAGAATTCCTTTCCCTGGGGCCCCCA
CCCTCCGTACGACACTTACGCACTTCGAAGTACTAAGTATTGCATACCTG
GTACCTCATATCATACAACTCAAAAAAGCGTGTATTTACCCGTGCAGTGC
ACAGTATCGGCACCTCTCTCGAAGTGTTGGCCGCTGAGACGGCAGCCGGC
AACTGCGGGTTAATGCTGTTCCGTTGAGGCGGTTGTTGTTGTGATGCATC
CACACTGTCGTATCGGGCGTGAAGTAGACAAGAAGCCTCCGGACTGGTTT
GTGGCCCTGAGCCGATTTCGGTGCGGCATCGCAGACTTTCCTACAGTTCC
GTCCAAAACCTTGTGAAAATTAAGTCCTAGGAGTGGACAACTAGTAGCCC
TGTTTGAAACGGCCACAAGCCTGGCTTTTTTTTCAACGTTCCGACAAAAT
AAACATCCGCGCTTCTGTCTGCTTTAAAGATTGCATGCATGCCGCGTCTC
CACAACCTCTTTTTGGCTGCAATCGAACCCCGTTTTTACACACGCGATCC
TCTTTTCTTCGTCCCTTCCTCATGCGCAAGACCGTCCAAGTATGTAGATG
CACACACCCAAAACCAAATTCTGCGGTGTTGTAGGAGGCACTTAACCACA
ATGCGTGCGGTCCTTTCGATGTTCTCTGGACCAAGAACTTTGTATTATTC
ACTCGGCCAAACATAGATGGGGGCCTCGTCATGTGTGGTAGGCGTCCCGT
GGTTTTACTTGACTCCGAAAAGAGGCGGCTCACGGCACATCACCTGAAAT
GGTGCGGAAAGCTAGCCCATTCACAGGCCATGCTACCGTACGGAGTATCT
GAACGCTCATCCCCTCCCTGTTCGCACTAGATTCAATTCCAAACTACGCT
GGTCTGCAGCCGGTTAATTTGTCACCCGCGGCTCATTTTTGCCATGGGGA
ATCCCCCCCGATTGTTGGGAATTCCCGGGGGATTGTTAGAAACTTCCTTA
GGTCCATCGTGTTCCTACAGCAACAAGAACGTATTTGCTCCGCCCCCCGC
CCCCCCCCGCCCCTCCATAAAAATGCATGCGAGCAAGGTTTTTCACGCGA
CCATACTCACTCAATCCATTAATTACAAATATATATCATTAGGTTTGTGG
TGCTGGCGGCGGACGCGCAAGTGGCGCGCTCCATCCTCCTGTACAAGGAC
ACCCAGGACAAGATAGCCCACCTCGCGGAAAACAAGGCGCTCGCCTGCGC
CGGCCCCCAGTCAGACTGCGTCTCCTTTACGGAGTACGTGTCCAAGAATA
TGACCCTTTACGAGCTGAACAACGACGTGAAGCTCACCACCAAAGCGGCC
GCCACATTCATCCGTGGCGAGGTATGATGTGTACGTGTCTACTTATGGGT
GGTGTCTCGGACTTGCTCCTGATGGCATTTGTAACTGCCAGAGTATCATA
TGACGCTCGATTTGGATGCTCGAGTATGGTGGAATTGAACACACTGCGCC
GACAGCGTGGTATGACGTCACATACAGTGCAGAGTTTTTTTGCATGCGTT
TCTAAGGTGTATTGCCGTCATCGAATTCTTGTGACATCGTAGCCGGTCGA
GTTTGACACTGACAGCATCTGCTGGTAGATTCTGAACAGTTGGCCGTTTT
CATAAATGTATACTTCGAAGTATAGCCTATCGCTCAACCACCAGGTTCTT
GACTGACGAAGTATTTGTTTCTATCATACATACGTACACCGTCGTGTGTT
ACCTCTGTGGGTTGTCGCTCAACAAAGCTCTTCCACTCGTCGGTTGTTTT
TGTTTTTCCGGTGTCCTCATCTTCATTTCACAGCTAGCAAAGGCGCTTCG
GAAGGGGCCGTTCCAGACGCAGCTGTTGATGGGGGGTGTCGACAAGCGGA
CAGAGGGTAAAGACGACGCGTCCTTGTTCTGGCTTGACTACCTCGGGACG
ATGCAAAAGGTACTTGGCTGACTTGGCGATTCACCACACGTGCACGTCAT
ACCTGCCTAAGACGCTAGAGTTTTATCACAAGCACATGCAATCTCCAAAA
AATGTTGTTTTTTATTCTCAACACTTTTTAGCCCACCGCCAAAAGTTTAC
CGCTGCTCGCAGTCACAAACCAGGCAAATTTTATGGTAGAAGAACGAACG
AAGTAAAAATGAAATAAAACAGAGGTCGTGCACAACATACGTGTGTACTT
ATATACAGTATACCAGTTTACCTGTTTGCCCTGTTTACCGGATATTTTGG
TCTTGCCACTAGAGGCCGGTAAACCGGGATATCGACTGTTATGTGCCTCC
ACTAGGGTACGACAACCTCGGGATGGGATGGTGTCGTTTTTGGGCGTGAA
GTGATGTCTCTTGAATCCCAGCTGACACTGCGGGTGATGATGCCGTCCGT
GTGTCGTTACTCGTGACGAGTGTTTTCGGGCTAGAATACCCAGGTAGTAG
TAGTATATCATGTACGGAAAAGGTGGCTGAAAATTCGTGTGCGAAGTATG
ATACGTAAAACTCCTTACATTTCCAAAAATCTTGACCTCCTTCGGATGGG
GTGCTTAGGGCGGGCCTTCAAGCACTGGTTATTCACAACTGGGATTTTCC
ACCAGGCCTGTGTACACTCGGTGTTTACCTTTGCGCAGGCAGCAGCATCC
GACCAGCGGTGATCGTGAGACGGTGCTGCTCTCGCCGACGGCTCTGAGGA
AAGAGCAATGCCGCTCTTGTCGAACGAGGACCGGAGCCTCCCCCATGGGG
AAACACCCCAAGAGGGACTGTTGTGTCGTAGTCGTGGTCCTTGGGCTGAC
GGTTGGTCGCAGCGACGTCTCTCGAAACCAAAACGCTTTTCCCTACCGCG
ATACTCGTCCATCAGGCCCGGAGAAGCCATCGCGCAGAAACGTGGCACTA
CAAACAACAACGAACGACATCCGCCGTACAGCAGTGCAAACCTGCGAAAT
CTACTTCACTTGTATCCGATATTCGTGTCGACTGCTGCAAAATGTCAGCG
TCGATATCGTGTAGCAGTGCCGCCGCACCGTGTGCGTCTTCCAAAACACG
CGCGTATTCTCCCCCAATCTTTTTTGTTAATATTGTTTCGATCGCAGGTA
CCGTACGGCGCGCACGGGTATGGCGCGGCGTTCACGTTGTCGGTGATGGA
CCGGGAGTACATCAAGGGCCTGTCGCTCGATGAGGCCTTGAGTATCATAG
AAAAGTGCATCAACGAGCTGCACACACGCTTCCTCATCGCACAGAAGAAC
TTCGTCATCAAGGTACGTGCATAAACGTGAAATCATGTAACTACGTAGTG
CTATGTTTCGGGCAGGGGCCCCGTGCTATGTTCCGGGCCAGGGCCCCGTG
TACGAAATAGAACAGGCGCGCGGGGGGGGCGATGGATAGTGGAGTAGATT
TTTTGCGTACAGCGTGACAAAGGTGACCCAGACAAAAGTGGCAGTCATGA
TTGTTGTACCCATGCAGTACGGTCTCGGTCGTTCTGAAGCTCCAAAAAGG
CGATATTAGTTGTTGGGATGATGACAGGGGTTTACTTCATTTCGTTTCAC
GTGACTGGGTATCGGGCGGAACAAGCCGGACCGCTGTGGTCAAGTCCTCG
ATACCCGGTCGTGATGCGGTCCCGTTTTTGTACGATTTTTCGGAACTTCA
TTCGAGTGCCTTCTTGCAGTTCTGTCTCGTCCACGCCCGCGATGGTTACT
GCTGTGATTTCGGTTTCCGATTAATTGATTGAACCGAGAGGGTTATCTCG
CTCCATCTGTTCTACACAAAGTAGGTATGTGTATGACAGGGCATCACGCC
CATGTTTCATGTGTGTTCCAATGCTGTTTGCTGTTTGCTGTTTGCTCCCC
GCCATTTTGCTTTGCCATCGCCGTGGGTCTACTCGAGACACTCTCAGTTT
GCTTTACTCCTGCGTCGCCCCATTCATCGCACGATACCTCTCCCCCTCTC
TCGCTCATTTTGGTTTGGTCTGTCAGGTACCTGCCATGATACGGTATCTC
GCCTCGTTTCCATGTTCTTGTTTCCCTTTGATGTTCTAGCCCCCCCTTTG
TTCAAGTACTCCTCTAGTGGTCTATCTGGCGCCTTCCCTTGAACATAACC
ACCCTTGTCTTCCTGATTTTCTTCGATTTTTACTACGTCGACATCATGAA
AGGTTGTGACGGCAGAGGGTATCAAGATCGTGCGAGCCCCCCCGGCGCCC
GATCTGGGCACGGCGGCGGCAACGGCGGAGGTAGCAGCGGTCCCCGCACA
AGGATAAAAATGATGTGGAAACGCATGAAAAATCGCGCGCGGAGTGGAGG
AAAGGGGCGCACGGACGGATACGGATGCGGGCAGGCGTGGGGGAGCTTGA
GAATGAAGGGAGATGTAGGATAATGCGGCCCGACGGCGAGCGGTGTGCGG
ACACACTTTACTTTATTCCGGCCGATGCCACTACTGTTGCAAGGTCGTGG
TGAGGGGCCTCTTGGGAGAGGCAGGCAGCTGATGTGAAAGCCCGACAACC
CGGAGGACTTGGGAGGCGTGGGACTAACCGAAACTCCGGGATTGGTGCAC
GCACGAAGGCGCGGGGAGAGTGTAGAGCGGGCGCGCTGTCTGGCCGGTTG
CGACAAGGCGTTTGTTTAGCATGGAAAATTTTGCATGGCAGACCTCCCCC
CCACCCCCCTTGACTTATCCCCGAGGGGTTGATTTGACGCACGTGTTTCT
TGTTTTCCTGAAGGGCGTACTGTAGTGTCTTGTTTTTTTACCGCATGCAA
CAGAGCTCTCTGGTGCTGTTGAAACCATTCTAAGCGAAGTGTTTCTCGAC
ACGATGCTGGCTCGCTCGCTCCTCCGCTCGTGTGTGCGATGAAACTGGCT
CAAGCAAGTGCAACAGTAAAACATGTACCTTGAAGTACTTCGTAGCACAT
TTGAGGATCAGCGTCAAGAAGAATGCGCAACCCCACTGTAGCGACGGCAA
TCATTTTTCAGTTTTGGTCGGTCCGACGTGGGTGCAGCTGTTGTTTTTTA
TCACACCACAACAATTCCTGCATGCCTTGTGCAGCCAACCATTGGTTGAA
CTCAAGATCTCCTCTCTACCTCCGAAATCACCGGAAAATAATACTTGGTA
CATCAAGTGTTTGTGTGTGCGTATTTGACGCGCGTGTTTGATGTCGCGTG
TGTGTGCTCGACACATTCATGGTGTAGGGTTTTGCGTTCAATAGATCCGT
GTCCCGTGTTTGCATCTCCCCAAAGTTGGGGCAACACAGATGAGAAGCGA
CTCAAGCCGATGGACACGCGCGTGTTTGTGCTCGACAACTTCTCTGTGAG
GTGTAGCGTTCAATAACCCCGTGTCCCGTGTGTGCACCTCCTCAAAGTTT
GAGCAATAAACCAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig75:308089..314852-

>mRNA_P-littoralis_Contig75.88.1 ID=mRNA_P-littoralis_Contig75.88.1|Name=mRNA_P-littoralis_Contig75.88.1|organism=Pylaiella littoralis U1_48|type=CDS|length=657bp|location=Sequence derived from alignment at P-littoralis_Contig75:308089..314852- (Pylaiella littoralis U1_48)
ATGGACACACTGCTAGGCATCGCCGGAGAAGGGTTTGTGGTGCTGGCGGC
GGACGCGCAAGTGGCGCGCTCCATCCTCCTGTACAAGGACACCCAGGACA
AGATAGCCCACCTCGCGGAAAACAAGGCGCTCGCCTGCGCCGGCCCCCAG
TCAGACTGCGTCTCCTTTACGGAGTACGTGTCCAAGAATATGACCCTTTA
CGAGCTGAACAACGACGTGAAGCTCACCACCAAAGCGGCCGCCACATTCA
TCCGTGGCGAGCTAGCAAAGGCGCTTCGGAAGGGGCCGTTCCAGACGCAG
CTGTTGATGGGGGGTGTCGACAAGCGGACAGAGGGTAAAGACGACGCGTC
CTTGTTCTGGCTTGACTACCTCGGGACGATGCAAAAGGTACCGTACGGCG
CGCACGGGTATGGCGCGGCGTTCACGTTGTCGGTGATGGACCGGGAGTAC
ATCAAGGGCCTGTCGCTCGATGAGGCCTTGAGTATCATAGAAAAGTGCAT
CAACGAGCTGCACACACGCTTCCTCATCGCACAGAAGAACTTCGTCATCA
AGGTTGTGACGGCAGAGGGTATCAAGATCGTGCGAGCCCCCCCGGCGCCC
GATCTGGGCACGGCGGCGGCAACGGCGGAGGTAGCAGCGGTCCCCGCACA
AGGATAA
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