mRNA_P-littoralis_Contig75.87.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: D8LF07_ECTSI (SGT1 homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF07_ECTSI) HSP 1 Score: 585 bits (1507), Expect = 1.890e-203 Identity = 337/427 (78.92%), Postives = 364/427 (85.25%), Query Frame = 1
Query: 112 MADSENPLHKGNQAFIDEDYPTTLQAYGEAVTLGGKDEALARSNRAAVYLKLSKHTEALQDASAAVKVVPTEIAFYRKGLAAFALEEFETALEAFRQGQKLKGA-GDSSDPRKYRTWIRKCEAELEAEEEVQAASGAATATXXXXXXXXXXXXXXXTDRGVPSEVAPASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASKLEITLTKKSPADWPELEDTATPAARPAXXXXXXXXXXXXX-APVEEPPTKIARPYSSTKNWDVVEKEVQKELDAEKPEGEEALNNLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTWEGDKLPQKDDDN 1386
M S+NP+HKGNQAFIDEDYP TLQAYGEA++LGG+ EALARSNRAAVYLKLSKHTEALQDASAAVK++PTE+AFYRKGLAAFALEEFETALEAFRQG+KL+ GDS+DPRKYRTW+RKCEAELEAEEE A XXXXXXXXXXXXXX +VAP SGG+V A A KRT PV ASS+AP HLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRK +A GALLFDKVLYEEVLPEKCRTRF ASKLE+T+TKKSPADWPELE A PAARPA A VE+PPTK+ARPYSSTK+WDVVEKEVQKEL+AEKP GE+ALN+LFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTWEG+KLPQK+DD+
Sbjct: 1 MEGSDNPIHKGNQAFIDEDYPATLQAYGEAISLGGEGEALARSNRAAVYLKLSKHTEALQDASAAVKLMPTEMAFYRKGLAAFALEEFETALEAFRQGKKLEEERGDSNDPRKYRTWVRKCEAELEAEEEAHAXXXXXXXXXXXXXXXXXXXXXX--------DVAPVSGGSV--GAAAAPVKRT-PVPASSTAPAHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKAGDNA----GALLFDKVLYEEVLPEKCRTRFMASKLEVTMTKKSPADWPELEGAAIPAARPAAAATATDASSTSGEAAVEQPPTKVARPYSSTKDWDVVEKEVQKELEAEKPGGEQALNDLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTWEGEKLPQKEDDD 412
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: A0A6H5K5R7_9PHAE (CS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R7_9PHAE) HSP 1 Score: 346 bits (887), Expect = 3.620e-112 Identity = 207/273 (75.82%), Postives = 223/273 (81.68%), Query Frame = 1
Query: 112 MADSENPLHKGNQAFIDEDYPTTLQAYGEAVTLGGKDEALARSNRAAVYLKLSKHTEALQDASAAVKVVPTEIAFYRKGLAAFALEEFETALEAFRQGQKLKGAGDSSDPRKYRTWIRKCEAELEAEEEVQAASGAATATXXXXXXXXXXXXXXXTDRGVPSEVAPASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASK 930
M S+NP+HKGNQAFIDEDYP TLQAYGEA++LGG+ EALARSNRAAVYLKL KHTEALQDASAAVK++PTE+AFYRKGLAAFALEEFETALEAFRQG+KL+ GDSSDPRKYRTWIRKCEAELEAEE XXXXXXXXX S++AP SGG+V A A KRT PVLASS+AP HLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVE KRLTV+RK +A GALLFDKVLYEEVLPEKCRTRF ASK
Sbjct: 1 MEGSDNPIHKGNQAFIDEDYPATLQAYGEAISLGGEGEALARSNRAAVYLKLGKHTEALQDASAAVKLMPTEMAFYRKGLAAFALEEFETALEAFRQGKKLEERGDSSDPRKYRTWIRKCEAELEAEEXXXXXXXXXXXXXXXXXXXXX------------SDIAPVSGGSV--GAAATPVKRT-PVLASSTAPAHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEPKRLTVKRKAGDNA----GALLFDKVLYEEVLPEKCRTRFMASK 254
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: A0A835ZF73_9STRA (SGS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF73_9STRA) HSP 1 Score: 290 bits (743), Expect = 7.310e-89 Identity = 203/433 (46.88%), Postives = 259/433 (59.82%), Query Frame = 1
Query: 133 LHKGNQAFIDEDYPTTLQAYGEAVTL-GGKDEALARSNRAAVYLKLSKHTEALQDASAAVKVVP-TEIAFYRKGLAAFALEEFETALEAFRQGQKLKG---AGD--------SSDPRKYRTWIRKCEAELEAEEEVQAASGAATATXXXXXXXXXXXXXXXTDRGVPSEVAPASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASKLEITLTKKSPADWPELEDTATPAA---RPAXXXXXXXXXXXXXAPVEEPPTKIARPYSSTKNWDVVEKEVQKELDAEKPEGEEALNNLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTWEGDKLPQKDDD 1383
L +GN AF+D+D+ +Q Y +AV G +A A RAA +LKL +H +ALQDA A+K+ P E A YR+G+A F+L+++ ALEAF G+ +G AG + D RKY TWIRKC AELEA A ATXXXXXXXXXXXXXXX P P + K+QYYQ+ +KVTV +LEK ++E + VD+ RL V G +LFDK L+++V+ +CRTRF ASK+E TL K+ +WP+LE + P P A +E P K PY+S ++WD +++++ KEL+AEKPEGEEALN LFK IY A+EDTRRAMVKSFQTSGGTVLSTNWDEV K DYEKE+QAPKGMEW+T+EGDK+PQ DDD
Sbjct: 4 LAQGNAAFVDDDFARAVQLYTQAVEADAGLADAYAA--RAAAHLKLRRHADALQDADGALKLRPGLEPALYRRGVACFSLDKYAEALEAFTAGKAAQGDRPAGKLPFVCRVRTDDSRKYSTWIRKCNAELEA----------ADATXXXXXXXXXXXXXXXXXXXXXXXXXP---------------------------PALVPPKYQYYQTADKVTVGILEKNVREGDAVVDISEDRLRVALTS--------GRVLFDKQLFDKVVVAECRTRFLASKIECTLKKQDAHNWPQLEGSGKPQKVIKPPPVAEAAAAEAAPAGAESQEKPPK---PYASHRDWDAIDRDISKELEAEKPEGEEALNELFKQIYKDANEDTRRAMVKSFQTSGGTVLSTNWDEVSKKDYEKEKQAPKGMEWRTYEGDKVPQIDDD 386
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: W7U5K4_9STRA (Suppressor of g2 allele of skp1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5K4_9STRA) HSP 1 Score: 254 bits (648), Expect = 8.700e-75 Identity = 166/417 (39.81%), Postives = 225/417 (53.96%), Query Frame = 1
Query: 133 LHKGNQAFIDEDYPTTLQAYGEAVTLGGKDEALARSNRAAVYLKLSKHTEALQDASAAVKVVPT-EIAFYRKGLAAFALEEFETALEAFRQGQKLKGAGDSSDPRKYRTWIRKCEAELEAEEEVQAASGAATATXXXXXXXXXXXXXXXTDRGVPSEVAPASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASKLEITLTKKSPA-DWPELEDTATPAAR-------PAXXXXXXXXXXXXXAPVEEPPTKIARPYSSTKNWDVVEKEVQKELDAEKPEGEEALNNLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKE--RQAPKGMEWKTW 1350
+ + AF+DEDY T + + + D+A A +RAAV+LKL++ ++AL DA AA + E+A+YR+G+AAFALE+F A EAF +G+ L G R+Y W+RK EL +E A R PS P S + P + + +KFQ+YQ+ VTV +L KGL+E + V V+ + L V D DA LFD+ L+E V+PE+ ++ A+K+E+ L K WPEL + AA P P P +K RPY+STK+W VEKE+ KEL++EKPEG+EALN LF+ IY K ++TRRAMVKSFQTSGGTVLSTNW+EVGK DYEKE R+AP+GMEW+ W
Sbjct: 1 MEQAQLAFMDEDYATADELFSAYIATH-PDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPS---------------SAPAIPAG------HVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDA-------LFDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPLRPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKW 388
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: A0A7S2BLI2_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BLI2_9STRA) HSP 1 Score: 248 bits (634), Expect = 3.910e-72 Identity = 178/491 (36.25%), Postives = 239/491 (48.68%), Query Frame = 1
Query: 127 NPLHKGNQAFIDEDYPTTLQAYGEAVTLGGKDEALARSNRAAVYLKLSKHTEALQDASAAVKV-VPTEIAFYRKGLAAFALEEFETALEAFRQGQKLKGAGDSSDPRKYRTWIRKCEAELEAEEEV------QAASGAATATXXXXXXXXXXXXXXXTDRGVPSEVAPASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASKLEITLTKKSPADWPELEDTATPAARPAXXXXXXXXXXXXXAPVEEPPTKIARPYSSTKNWDVVEKE-----------------------------------------------------------------VQKELDAEKPEGEEALNNLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTWEGDKLPQKDDD 1383
N L +D+D+ L+++ A+ L + A + RAA ++KL K+T ALQDA+AAVK+ E+A++RKG+A FAL+EFETAL+AFR+G+ L+ G D R Y WIRKCE+E+E++++V AS AA A+ +P+ + P PE ++K+Q+YQS +TV+++EK LK EV VD+ K L V A + D LYE + P + + +K+EI L K WP+L+ A+ A + V + +A PYSS NW V+KE + +EL+ +KPEGEEALN LFK+IYGKADE+TRRAM KSFQTSGGTVLSTNW EV KADYE ERQAP GMEWK WEG KLP K DD
Sbjct: 11 NFLSVATDQLVDDDFEGALESFSAALELDA-NSVKALTGRAATFIKLEKYTSALQDANAAVKLDEKCEVAYFRKGMACFALDEFETALDAFRKGKDLQPPG--KDSRSYGRWIRKCESEIESDDDVIDMETEDGASPAAVASPP-----------------IPAPMQPVQ------------------------PPEEKKLKYQHYQSASLLTVSIMEKKLKPEEVAVDISEKHLKVTV-----ARPNVEPICMDVDLYEFIDPSQSSFKIMGTKVEIKLKKVEGIQWPDLKACASVMPTAA-------------SSVSSSGSSLANPYSSGTNWSKVKKELKSKTARKIFCICIVVELCSVAGESLIFLDDSGSVYVNRNNLERYLAQFHFLNYALPNSFKVDKGISEELEKDKPEGEEALNELFKNIYGKADEETRRAMNKSFQTSGGTVLSTNWGEVAKADYETERQAPSGMEWKNWEGKKLPMKKDD 439
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: A0A7S2SS77_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS77_9STRA) HSP 1 Score: 246 bits (628), Expect = 6.850e-72 Identity = 170/433 (39.26%), Postives = 238/433 (54.97%), Query Frame = 1
Query: 106 ISMADSENPLHKGNQAFIDEDYPTTLQAYGEAVTLGGKDEALARS--NRAAVYLKLSKHTEALQDASAAVKVVPT-EIAFYRKGLAAFALEEFETALEAFRQGQKLKGAGDSSDPR--KYRTWIRKCEAELEAEEEVQAASGAATATXXXXXXXXXXXXXXXTDRGVPSEVAPASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVR--RKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASKLEITLTKKSPADWPELEDTATPAARPAXXXXXXXXXXXXXAPVEEPPTKIARPYSSTKNWDVVEKEVQKELDAEKPEGEEALNNLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTWEGDKLPQKDDD 1383
+S+ D+ L + +D+D+ ++ + A+ + + + R+ R+ KL +HTEALQDA+ A+ + + E+AF+RKG A F LEE+ETAL AF +GQ L + ++PR Y WIRKCE E+E +E D VP + SG P +A A + +AP IK+Q+YQ+ V VA++EK LK+ EV V++E + VR R+G + A L++ V+P + ++K+EI L K W +L ++ AAR V A PY+S ++W+ V+K +Q+EL+ EKPEGEEALN LF+SIY KA E+TRRAM KSFQTSGGTVLSTNWDEV +DYEKERQAP GMEWKTWEG KLP K++D
Sbjct: 15 MSVMDAAECLAAASDLILDDDFEGAVEQFTLALEI---EPGMIRAFTGRSTALQKLGRHTEALQDANKAIALDGSCEVAFFRKGTACFELEEYETALAAFTKGQSLLKSSGKAEPRGRNYDRWIRKCETEIEDDE----------------------------DELVPENMV-GSGAGEPAAAAAADVQPP-------AAPPRPSIKYQHYQTAGHVVVAIMEKKLKKDEVSVEIEDRVCVVRISREGSEPAS-------LTLHLWDSVVPAESSFVVLSTKVEIKLKKVGDFQWDDLVNSG--AAR-------------VVTAVPSSSAASATPYASKRDWNQVDKAMQEELEKEKPEGEEALNELFRSIYSKASEETRRAMNKSFQTSGGTVLSTNWDEVATSDYEKERQAPNGMEWKTWEGKKLPMKEED 386
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: W2NT71_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2NT71_PHYPR) HSP 1 Score: 236 bits (601), Expect = 2.890e-68 Identity = 159/408 (38.97%), Postives = 228/408 (55.88%), Query Frame = 1
Query: 136 HKGNQAFIDEDYPTTLQAYGEAVTLGGKDEALARSNRAAVYLKLSKHTEALQDASAAVKVVPT-EIAFYRKGLAAFALEEFETALEAFRQGQKLKGAGDSSDPRKYRTWIRKCEAELEAEEEVQAASGAATATXXXXXXXXXXXXXXXTDRGVPSEV-APASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASKLEITLTKKSPA-DWPELEDTATPAARPAXXXXXXXXXXXXXAPVEEPPTKIARPYSSTKNWDVVEKEVQKELDAEKPEGEEALNNLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTW 1350
H+GN F+DE Y +++Y A+ +D A A S RAA YLKL+K EA+ DAS A ++ PT + R G+A F LE++ A AF++G+ D + ++++TWIRKC+AEL+ ++E D VP + AP++ GA V+A P I+ +YQS VTV++L+K L + +V+V +E K+L VR K D G A +++ L++EV+P++ + SK+E+ L KKS W +LE+ + A E P ++ RPY+S+++W+ +EK + EL+AEKPEGEEA+ LF+ IY KADE+TR+AM KSFQTSGGTVLSTNW EV DYEKER AP GMEWK W
Sbjct: 5 HEGNALFVDEAYEEAVRSYTRALEKQPQD-ADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRAFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDE----------------------ELVIPDDPVPMQTSAPSNQGAA--------------VVAP--LPMKPTIRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLD-----GEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMTGPA--------AVFEAKPEQVPRPYASSRDWNQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEKERTAPSGMEWKQW 360
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: A0A8K1FJ23_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ23_PYTOL) HSP 1 Score: 235 bits (599), Expect = 5.500e-68 Identity = 154/407 (37.84%), Postives = 224/407 (55.04%), Query Frame = 1
Query: 136 HKGNQAFIDEDYPTTLQAYGEAVTLGGKD-EALARSNRAAVYLKLSKHTEALQDASAAVKVVPTEI-AFYRKGLAAFALEEFETALEAFRQGQKLKGAGDSSDPRKYRTWIRKCEAELEAEEEVQAASGAATATXXXXXXXXXXXXXXXTDRGVPSEVAPASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASKLEITLTKKSPADWPELEDTATPAARPAXXXXXXXXXXXXXAPVEEPPTKIARPYSSTKNWDVVEKEVQKELDAEKPEGEEALNNLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTW 1350
H+ N F+DE Y + AY +A+ D +ALA+ RAA YL++++ EA+ DA A+++ P + AF RKG+A F LEE+ A +AF G+K+ A + + ++++TWIRKC+AEL++++EV A +A VP+ A A TPV S I+ ++YQS VT++V +K L + +V D+ K+L V K G +K L++EV + + K+E+ L KK W +L++ A A EE ++ RPY+S ++W+ +E+ V +EL++EKPEGEEA+ LF+ IY KADEDTRRAM+KSFQTSGGTVLSTNW EV + DYEKER AP+GMEWK W
Sbjct: 5 HQANALFVDEAYTEAIAAYTKAIAASPTDADALAK--RAAAYLQVNQPKEAIADADKAMQLDPKLVLAFLRKGVAHFELEEYSLAKKAFAAGKKVVEAKEEALLKRFQTWIRKCDAELDSDDEVDMADAVPSAAPV-----------------VPTPAXXA-------------APARTPVQKPS-------IRHEWYQSNSHVTISVFQKNLNQDDVVADITPKQLAV-----KVRVNGEFVEALNKALFDEVDVDGSSWKIIGPKVEVRLKKKVQTHWDQLDE--------AVYKTGSKVITGPAAVYEEKKPEVPRPYASHRDWNQIERAVGEELESEKPEGEEAMQKLFRDIYSKADEDTRRAMIKSFQTSGGTVLSTNWKEVQEKDYEKERTAPEGMEWKKW 359
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: A0A833SH29_PHYIN (SGS domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SH29_PHYIN) HSP 1 Score: 235 bits (599), Expect = 5.830e-68 Identity = 153/407 (37.59%), Postives = 226/407 (55.53%), Query Frame = 1
Query: 136 HKGNQAFIDEDYPTTLQAYGEAVTLGGKDEALARSNRAAVYLKLSKHTEALQDASAAVKVVPT-EIAFYRKGLAAFALEEFETALEAFRQGQKLKGAGDSSDPRKYRTWIRKCEAELEAEEEVQAASGAATATXXXXXXXXXXXXXXXTDRGVPSEVAPASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASKLEITLTKKSPA-DWPELEDTATPAARPAXXXXXXXXXXXXXAPVEEPPTKIARPYSSTKNWDVVEKEVQKELDAEKPEGEEALNNLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTW 1350
H+GN F+DE Y +++Y A+ +D A A S RAA YLKL K EA+ DAS A ++ PT +A R G+A F LE++ A +F++G++ D + ++++TWIRKC+AE++ ++E + +P + P G +A R + +P I+ +YQS VTV++L+K LK+ +V+V +E K+L VR K D + +++ L++EV+ E+ + +SK+E+ L KKS W +LE+ A A E P + RPY+S+++WD +EK + EL+AEKPEGEEA+ LF+ IY KADE+TR+AM KSFQTSGGTVLSTNW EV + DYE ER AP GMEWK +
Sbjct: 5 HEGNAVFVDEAYEEAVRSYTRALEQQPQD-ADALSKRAAAYLKLHKLQEAVADASRAFQLDPTLHMAHMRHGVALFELEKYAEAKRSFQRGKETASNADEALVKRFQTWIRKCDAEMDTDDEAELI--------------------------LPDDPEP----------GQSAALRNQSAAVVAPSPVQPTIRHDWYQSSTHVTVSILQKKLKQEDVEVTIEPKKLLVRVKLDDEM-----VEAYNEALFDEVVAEESSFKVLSSKVELKLKKKSNGMHWDKLEE--------AVYQSGGQVMTGPAAVFEAKPDHVPRPYASSRDWDQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVAEKDYETERTAPTGMEWKKY 361
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Match: A0A0P1A733_PLAHL (Sgs-domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A733_PLAHL) HSP 1 Score: 234 bits (598), Expect = 8.160e-68 Identity = 156/408 (38.24%), Postives = 223/408 (54.66%), Query Frame = 1
Query: 133 LHKGNQAFIDEDYPTTLQAYGEAVTLGGKDEALARSNRAAVYLKLSKHTEALQDASAAVKVVPT-EIAFYRKGLAAFALEEFETALEAFRQGQKLKGAGDSSDPRKYRTWIRKCEAELEAEEEVQAASGAATATXXXXXXXXXXXXXXXTDRGVPSEVAPASGGAVPGSAGAGSAKRTTPVLASSSAPEHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKGDKDADGGGGALLFDKVLYEEVLPEKCRTRFAASKLEITLTKKSPA-DWPELEDTATPAARPAXXXXXXXXXXXXXAPVEEPPTKIARPYSSTKNWDVVEKEVQKELDAEKPEGEEALNNLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEKERQAPKGMEWKTW 1350
LH+GN F+DE Y LQ+Y A+ ++ A S RAAVYLKL K EA DAS A K+ PT +A R G+A F LE++ A ++F+ G++ + + ++++TWIRKC+AEL++E E + V SAG+ L + S H +YQS VT+A+L+K L + +V++ +E RL VR K D D +++ L++E++P++ + +SKLE+ L KKS W +LE+ ++ A E P ++ RPY+S ++W+ +EK + EL+AEKPEGEEA+ LF+ IY KADE+TR+AM KSFQTSGGTVLSTNW EV + DYEKER AP GMEWK W
Sbjct: 4 LHEGNSLFVDEAYDEALQSYTRALK-HQQENAEVLSKRAAVYLKLRKLHEAEGDASQATKLDPTLYMAHLRHGMAQFELEKYAEAKQSFQNGKEATPQVNEALIKRFQTWIRKCDAELDSENEADLIISDDPVS-------------------------------VQRSAGSDCGAAAIAPLPAKSVIRH-----DWYQSSTHVTLAILQKNLPQDDVEITIEPTRLLVRIKLDNDI-----VEAYNEALFDEIVPDESSYQVLSSKLELKLKKKSIGMHWDKLEEVTYKSSTQVLTGPA--------AVFEAKPEQVPRPYASNRDWNRIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVAEKDYEKERTAPDGMEWKKW 361 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.87.1 >prot_P-littoralis_Contig75.87.1 ID=prot_P-littoralis_Contig75.87.1|Name=mRNA_P-littoralis_Contig75.87.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=426bp MADSENPLHKGNQAFIDEDYPTTLQAYGEAVTLGGKDEALARSNRAAVYLback to top mRNA from alignment at P-littoralis_Contig75:301644..308002+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.87.1 ID=mRNA_P-littoralis_Contig75.87.1|Name=mRNA_P-littoralis_Contig75.87.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6359bp|location=Sequence derived from alignment at P-littoralis_Contig75:301644..308002+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:301644..308002+ >mRNA_P-littoralis_Contig75.87.1 ID=mRNA_P-littoralis_Contig75.87.1|Name=mRNA_P-littoralis_Contig75.87.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1278bp|location=Sequence derived from alignment at P-littoralis_Contig75:301644..308002+ (Pylaiella littoralis U1_48)back to top |