mRNA_P-littoralis_Contig75.77.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig75.77.1
Unique NamemRNA_P-littoralis_Contig75.77.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: D8LEZ0_ECTSI (SGNH_hydro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ0_ECTSI)

HSP 1 Score: 502 bits (1292), Expect = 9.480e-173
Identity = 251/327 (76.76%), Postives = 280/327 (85.63%), Query Frame = 2
Query:  209 MGIREFWLLTSFFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATA-AXXXXXXXKTTECPVELVKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAGGLTVGVEGGGGGSGAPVAPSSGESLKPKSKARKKAD 1186
            M  REFWLLTS+ LVALRRALTV WIR+NKFL  PDW+IRPV+DFRHKVVLIGDGFAEG+GDWVVMGG AGVTR+LEK+AGSDEKVRT W IINRGRAGS+S+DWLPSD KSLYH+ ++S AC+DAEIF+VALGTMDVV +CVGMPV+AMRKTALD FEE E+CDT+KN+REICDAL+A+GKKV+VCNVMTSGAGINRR GTAKR+NRQLALY KATA A            PVE+VKMNNPRAAREDGRAFDGLHLNARGYRAFA AVY+ +GPMMVAVEWKVWK+KLA GLT G        GA VAP SGE  +PKSK+ KKAD
Sbjct:    1 MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVADFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSEACRDAEIFVVALGTMDVVNDCVGMPVSAMRKTALDTFEEGEICDTVKNLREICDALRAEGKKVVVCNVMTSGAGINRRTGTAKRINRQLALYGKATATATAKGETAPKGGQPVEVVKMNNPRAAREDGRAFDGLHLNARGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGA------GGAAVAPISGEGFEPKSKSNKKAD 321          
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A024U869_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U869_9STRA)

HSP 1 Score: 151 bits (381), Expect = 5.710e-38
Identity = 90/283 (31.80%), Postives = 147/283 (51.94%), Query Frame = 2
Query:  233 LTSFFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
            L  +  VA+R A    W+R  ++LT P  L+   ++++HK+V+IGDGFA G GDW+ M    G+++ L ++   ++K+R  WQ+INRG   + S+ W P+     +         +DA+I +V +G++D           + RK    + E+     T+ N++ ICDAL+  GK+V V ++    A  +    T +  N+ L  Y ++T         K  + PV+L   ++ P   R D +AFDG H NA+ Y+  A      L P++ AVEW  WK +L G
Sbjct:    4 LVLYVYVAVRTAAAWLWLRFCRWLTQPLRLVLKANEYQHKIVIIGDGFAAGFGDWITMATSGGLSQYLAQEVAKEDKIRHRWQVINRGILDTDSSQWHPTSSTKYFQDVFSVPQLRDADIVMVIVGSID-----------SRRKNPSISPEQ-----TVCNIQAICDALRKKGKRVCVGSLCH--ADFDTENETHRVTNQALVDYCEST---------KMDDLPVKLTPDLSTPVVRRSDSKAFDGYHFNAKAYQQIARDSMAVLTPLLTAVEWATWKKQLEG 259          
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: W4FUK0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUK0_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.560e-37
Identity = 86/277 (31.05%), Postives = 143/277 (51.62%), Query Frame = 2
Query:  251 VALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
            VA+R  +   W+R  ++   P  L+   +++ HK+V+IGDGFA G GDW+ M    G++  +  +   ++K+R  WQ+INRG   + S+ W P+     +   + +   +DA++ +V +G+MD           A RKT   +   D+   TL+N++ ICDAL+  GK+V V ++  S   +       + +N+ L  +  +TA         T   PV++   ++ P   R D +AFDG H NA+ Y+  A      L P++ AVEW  WK +L G
Sbjct:    6 VAVRTFIAWLWLRFCRWCAQPLRLVLKSNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSSTKYFQSVMSTPQLRDADVVLVVVGSMD-----------ARRKTP--SISPDQ---TLRNIQAICDALRKKGKRVCVGSLCHSD--VVTECDGHRSINQALVDFCASTA---------TDAFPVKITPDLSTPVVRRSDAKAFDGFHFNAKAYQQIARDSMMVLTPLLTAVEWSTWKKQLDG 255          
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A6G0XR96_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR96_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.440e-36
Identity = 90/281 (32.03%), Postives = 137/281 (48.75%), Query Frame = 2
Query:  242 FFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDE-KVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
            +  VA+R      W+R+ ++   P  LI P ++FRHK+V+IGDGFA G GDWV M    G+ R +  +   +E KVR  WQ+INRG   + S+ W P+     +         +DA+I +V +G+MD           + R   +   +      T+ N++ ICDAL+  GK+V +  +  S          A   N+QL  Y   T+           + PV++   ++ P   R D +AFDG H N++ Y+  A      L PM+ AVEW  WK +L G
Sbjct:    7 YIYVAIRTFFAWIWLRLCRWCAQPLRLILPSNEFRHKIVIIGDGFAAGFGDWVTMDSPGGLARYIANEIAQEESKVRHKWQVINRGILDTDSSQWHPTASTKYFQDTFSKHQLRDADIVLVIVGSMD-----------SKRSPPIPPSQ------TVTNIQSICDALRKKGKRVCIGTLCHSDVEAQNEIHRAT--NKQLLEYCNETSGD---------DLPVKMTPDLSLPIVRRPDAKAFDGFHFNSKAYQQIAHEAMTVLTPMLTAVEWITWKKQLDG 259          
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A485L2D1_9STRA (Aste57867_14724 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2D1_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.360e-35
Identity = 85/283 (30.04%), Postives = 134/283 (47.35%), Query Frame = 2
Query:  242 FFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIV---CNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
            +  V +R      W+R  +++  P  L+   ++F HK+V+IGDGFA G GDWV M    G+ + + K+  ++ K+R  W++INRG   S SADW P+ +   +     +   +DAE+ +V +G++D+                   +      +TLKN++ ICDAL   GK+V V   C++             A RL  +        A           E P+++   ++ P   R D +AFDG H N++ Y+  A      L P + AVEW  WK KL G
Sbjct:    8 YIYVTVRTFFAWLWLRYCRWVAQPIRLVPRSNEFVHKIVIIGDGFAAGFGDWVTMDSAGGLAQYIAKEIVNEPKIRHKWKVINRGILNSDSADWHPTSQTKYFQDVFSTRQLRDAEVVLVIVGSIDI-----------------RRYPRIPAAETLKNIQSICDALTKKGKRVCVGSLCHIDIEAQN------EAHRLENK--------AILDLCTDTSADELPIKMAPDLSTPIVRRADSKAFDGFHFNSKAYQQIARDTMTVLTPTLTAVEWTTWKKKLDG 259          
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: T0QG23_SAPDV (SGNH_hydro domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG23_SAPDV)

HSP 1 Score: 138 bits (347), Expect = 3.060e-33
Identity = 87/281 (30.96%), Postives = 133/281 (47.33%), Query Frame = 2
Query:  242 FFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGA-GINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVELVK-MNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAG 1078
            +  V +R      W+R+ +++  P   I P S++RHK+V+IGDGFA G GD++      G+ + L      + K+R  WQ+INRG   + S+ W P  +   +         +DA+I +V +G+MD           A R   +    E E+  TL+N++ ICDAL   GK+V V  +  S    IN +     +L R   +              +  E PV     +  P   R + +AFDG+H N+ GY+  A    D + P+  AVEW  WK KL G
Sbjct:    7 YLYVIVRSYCAWLWLRLCRWIQQPPRAILPTSEYRHKIVIIGDGFAAGYGDYINFDSPGGLAKYLHAAMAQEAKIRHNWQVINRGIVDTDSSQWTPMADTKYFQTVFSKKEYRDADIVLVVVGSMD-----------AQRSPPI----EPEV--TLRNIKSICDALTKKGKRVAVGTLCHSDIKAINVKHTATNKLLRDFCV------------DTQHDELPVMCAPDLAIPMVRRPEAKAFDGIHFNSSGYKQIAKDAMDVIQPLATAVEWTTWKKKLDG 258          
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A0W8C468_PHYNI (SGNH_hydro domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C468_PHYNI)

HSP 1 Score: 135 bits (341), Expect = 2.120e-32
Identity = 95/284 (33.45%), Postives = 137/284 (48.24%), Query Frame = 2
Query:  248 LVALRRALTVAWIRMNKFLTSPDWL--IRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAG-VTRVLEKQAGSDEK----VRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVEL-VKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLA 1075
            LVALR  L + W  +  FL     +  ++P S F HKVV+IGD FA G+GD++ +GG  G + + L+K    D+K    VR  W IIN G  GS +ADWL S  K  +     S+   DA I I+ LG+ ++            R +     E        +N+ EICD L+  GK+V +  V++     +     +  LN  L  + K+T+         T E PV L  +++     RE    +D  H N++ YR  A    D L PMM AVEW  WK +L+
Sbjct:    2 LVALRAFLALVWWHICHFLAYNLHVRGLKPSSQFFHKVVIIGDDFAAGIGDYITIGGAGGGIAQYLKKIVAYDDKASGAVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSSVMSDASIVIIILGSTEI------------RNSGTAEHE------IKRNLMEICDTLRKKGKQVCLATVVSPEPTASEMDSASSTLNTALEQFCKSTS---------TEEAPVILGPRLDTYAFRRESALCYDKYHFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQLS 258          
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A329T1V1_9STRA (SGNH_hydro domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1V1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.980e-32
Identity = 93/280 (33.21%), Postives = 133/280 (47.50%), Query Frame = 2
Query:  248 LVALRRALTVAWIRMNKFLTSPDWL--IRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAG-VTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVEL-VKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLA 1075
            L  LR  L + W  +  FL     +  + P S F HKVV+IGD FA G+GD++ +G   G +   L+K    D+KVR  W IIN G  GS +ADWL S  K  +     S A  D  I I+ LG+ ++            R ++ D  E         ++ EICD L+  GK+V +  V +     +     +  LN  L  + K+T+         T E PV L  +++     RE   ++D  H N++ YR  A    D L PMM AVEW  WKA+L+
Sbjct:    2 LATLRAFLALLWWYICHFLAYNLHVRGLNPASQFFHKVVIIGDDFAAGIGDYISVGSAGGGIAEYLKKIVAFDDKVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSRAMSDVSIVIIILGSAEI------------RNSSSDGHEMKH------HLMEICDTLRKKGKQVCLATVASPDPTASETDSASSTLNTALEQFCKSTS---------TEEAPVILGPRLDTYAFRRESALSYDKYHFNSQSYRQLACNTADFLIPMMTAVEWTTWKAQLS 254          
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A3F2S1E0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1E0_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.930e-31
Identity = 97/291 (33.33%), Postives = 137/291 (47.08%), Query Frame = 2
Query:  248 LVALRRALTVAWIRMNKFLTSPDWL--IRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSL-----------YHKN-LRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVEL-VKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLA 1075
            L+ LR  LT+ W  +  F+     +  I+P S F HKVV+IGD FA G+GD++ MG   GV   L+     ++KVR  W IIN G  GS +ADW+ S  K +           Y KN L S +  DA I I+ LG+            A +R  A    E        +N+ EICD L+  GK V +  V +     +     +  LN  L  + K+T+         T E PV    +++N    RE+  ++D  H N++ YR  A    D L PMM A EW  WK +L+
Sbjct:    7 LLPLRLFLTLVWWHICHFIAHALHVKGIKPSSQFFHKVVVIGDDFAAGIGDYITMGSAGGVAEYLKSIVAYNDKVRHNWAIINAGVPGSTTADWMMSSPKQVNTALVNISSLTYFKNALTSRSMGDASIVIIILGS------------AELRNPAAAGHE------MKRNLMEICDTLRKKGKHVCLATVASPDPLASETDCASSTLNTALEQFCKSTS---------TEEAPVIFGPRLDNYAFRRENALSYDKYHFNSQSYRLLARNTADFLVPMMTAEEWATWKEQLS 270          
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Match: A0A2D4BF39_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF39_PYTIN)

HSP 1 Score: 131 bits (330), Expect = 1.170e-30
Identity = 91/294 (30.95%), Postives = 144/294 (48.98%), Query Frame = 2
Query:  233 LTSFFLVALRRALTVAWIRMNKFLTSP--DWLIRPVSDFRHKVVLIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGSVSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAMRKT-------ALDNFEEDEMCDT---LKNVREICDALKADGKKVIVCNVMT-SGAGINRRAGTAKRLNRQLALYAKATAAXXXXXXXKTTECPVEL-VKMNNPRAAREDGRAFDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKL 1072
            + S  + ++R  LT+ W+++ +++     D  ++P   F HK+V+IGD FA G+GD++V+GG AG+ + L       +KVR  W ++NRG  GS + DWL +         L S A +DAE+ IV LG+ +    CV + +  + ++        +D       C      KN+  ICD L+  GK V +  + + S  G + +      LN  L  +  +T         K  + PV L  +++     RE   AFD  HL + GY+  A    D L P+M  VEWK WK +L
Sbjct:    1 MASAXVTSIRLYLTLLWLKICRWVVHALYDRSLKPTDQFFHKIVVIGDDFAAGVGDYLVLGGNAGLAQHLPHAIAQSDKVRHRWAVVNRGVVGSTTGDWLLNAPTKYMDDILSSKATRDAEVVIVVLGSQEY--RCVPVRLHTLPRSWITDEIVGMDRNRSQPSCQVGVMHKNLVAICDTLRKKGKHVCLATIASPSPLGQDEKIP----LNAMLEEFCAST---------KGDDTPVVLGPRLDTYAFRRESLLAFDSYHLCSNGYKVLARNTADFLVPIMTGVEWKTWKKQL 279          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ0_ECTSI9.480e-17376.76SGNH_hydro domain-containing protein n=2 Tax=Ectoc... [more]
A0A024U869_9STRA5.710e-3831.80SGNH_hydro domain-containing protein n=1 Tax=Aphan... [more]
W4FUK0_9STRA3.560e-3731.05SGNH_hydro domain-containing protein n=3 Tax=Aphan... [more]
A0A6G0XR96_9STRA1.440e-3632.03SGNH_hydro domain-containing protein n=1 Tax=Aphan... [more]
A0A485L2D1_9STRA1.360e-3530.04Aste57867_14724 protein n=1 Tax=Aphanomyces stella... [more]
T0QG23_SAPDV3.060e-3330.96SGNH_hydro domain-containing protein n=1 Tax=Sapro... [more]
A0A0W8C468_PHYNI2.120e-3233.45SGNH_hydro domain-containing protein n=15 Tax=Phyt... [more]
A0A329T1V1_9STRA4.980e-3233.21SGNH_hydro domain-containing protein n=2 Tax=Phyto... [more]
A0A3F2S1E0_9STRA4.930e-3133.33SGNH_hydro domain-containing protein n=3 Tax=Phyto... [more]
A0A2D4BF39_PYTIN1.170e-3030.95Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:286210..290606 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LEZ0
PFAMsLipase_GDSL_2
Model size1822
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons5
Evalue1.45e-175
EggNOG OGs2AVME@1|root,2RZWN@2759|Eukaryota
Ec32 ortholog descriptionSGNH hydrolase-type esterase domain
Ec32 orthologEc-21_006070.1
Cds size981
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.77.1prot_P-littoralis_Contig75.77.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig75 286843..290398 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791547.9303129-UTR-P-littoralis_Contig75:286209..2868421680791547.9303129-UTR-P-littoralis_Contig75:286209..286842Pylaiella littoralis U1_48UTRP-littoralis_Contig75 286210..286842 -
1680791548.0060453-UTR-P-littoralis_Contig75:290398..2906061680791548.0060453-UTR-P-littoralis_Contig75:290398..290606Pylaiella littoralis U1_48UTRP-littoralis_Contig75 290399..290606 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791547.9432502-CDS-P-littoralis_Contig75:286842..2872741680791547.9432502-CDS-P-littoralis_Contig75:286842..287274Pylaiella littoralis U1_48CDSP-littoralis_Contig75 286843..287274 -
1680791547.9571342-CDS-P-littoralis_Contig75:287525..2877411680791547.9571342-CDS-P-littoralis_Contig75:287525..287741Pylaiella littoralis U1_48CDSP-littoralis_Contig75 287526..287741 -
1680791547.9700677-CDS-P-littoralis_Contig75:288362..2884401680791547.9700677-CDS-P-littoralis_Contig75:288362..288440Pylaiella littoralis U1_48CDSP-littoralis_Contig75 288363..288440 -
1680791547.9829168-CDS-P-littoralis_Contig75:289381..2894921680791547.9829168-CDS-P-littoralis_Contig75:289381..289492Pylaiella littoralis U1_48CDSP-littoralis_Contig75 289382..289492 -
1680791547.99588-CDS-P-littoralis_Contig75:290254..2903981680791547.99588-CDS-P-littoralis_Contig75:290254..290398Pylaiella littoralis U1_48CDSP-littoralis_Contig75 290255..290398 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig75.77.1

>prot_P-littoralis_Contig75.77.1 ID=prot_P-littoralis_Contig75.77.1|Name=mRNA_P-littoralis_Contig75.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp
MGIREFWLLTSFFLVALRRALTVAWIRMNKFLTSPDWLIRPVSDFRHKVV
LIGDGFAEGLGDWVVMGGMAGVTRVLEKQAGSDEKVRTFWQIINRGRAGS
VSADWLPSDEKSLYHKNLRSAACKDAEIFIVALGTMDVVGECVGMPVAAM
RKTALDNFEEDEMCDTLKNVREICDALKADGKKVIVCNVMTSGAGINRRA
GTAKRLNRQLALYAKATAAAAAATTTKTTECPVELVKMNNPRAAREDGRA
FDGLHLNARGYRAFAGAVYDALGPMMVAVEWKVWKAKLAGGLTVGVEGGG
GGSGAPVAPSSGESLKPKSKARKKAD*
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mRNA from alignment at P-littoralis_Contig75:286210..290606-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig75.77.1 ID=mRNA_P-littoralis_Contig75.77.1|Name=mRNA_P-littoralis_Contig75.77.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4397bp|location=Sequence derived from alignment at P-littoralis_Contig75:286210..290606- (Pylaiella littoralis U1_48)
GAACAAAGGGGGTTGCAGATTGCGGACAGCAGCGGGTGTGTTTGTGTAGG TGTGTGTATGTTGGTTTGTGTCGGTCTCTGCAAGGTGCAACCAAGGGTTT GTCGAGTAGGCGGGTAGACGTGTGGTCATCAAACGTACGGCGGACCCAAA TTTTGAAATTTACAGAGGTACAAGGGGAACAACGCAATAAATTTCTCGCT AGACCAAGATGGGGATTCGCGAGTTTTGGCTGCTGACAAGCTTCTTCCTT GTTGCTTTGAGAAGGGCGTTGACCGTCGCATGGATTCGGATGAACAAGTT CCTCACGAGCCCCGACTGGCTTATTCGACCCGTCTCAGACTTTCGACACA AGGTATGATATGGCGTACTCATCTCCGCAGATCTATTAATAGCTGTTCTT GCCTGACATGCGAGCAGCGAGCAGCGGCGTAGACCAAAGCAGAATTCAGA ATTATTATACATTTTATGTCACTGCTGCTGTACGTGAAAAGGTGACGAGA CTTCCAGGTTGACATTGTGTTGTCATCCCATATTCTCTGGCACACTAGTC TGCACCCTGCGGTTCAAACTACAGGCTAGGCCCATCGACGGGGTCACAGA GGAGGAAGGTCAACACAGGAGGAGATACCCCCACCTTCCTTCTGCGGTAC ATGCGTGAGATTTTTTCTCGCGAGCAGGGGTGCTCCGTTGTCGTAGACAG CAGACAGATACCAACATACCATCTGCTGTTTGATACGAAGTACTTTGTAC TTCGGAGTACATGACTCAAGTACCGATCGCTGCGGCACCGTCCCCGTTTC CTACTGCTGTACCTTCAAGCCTATCCGTGCCCAGTTGACATTCTGCTGGA GCGGATTAGGATATTCTCTATAGTACCTGTTCTAAATTTATACGAACTGT AGTGTACAGCAGTACCGAGTAGTCCAATCGCCCCTGTGTTTCATGCTTTT CTGCTACTTCTCCTGTAGAGCCCTCCTTGCGGGTGTTGTGGTCATACCTG GTACGTGATACCATCGGCTTCGCGTGGTATAACATTTCCAGTACATGACA TCAGGAATCATACCTGGTACGTTTTTTTACCCGCCGGGAAAACGTCCCAC ACGGCCGTGCTCAGGTGGTCCTTATTGGAGATGGCTTTGCGGAGGGCCTG GGGGACTGGGTCGTTATGGGGGGAATGGCTGGCGTAACGCGGGTGCTCGA GAAACAAGCTGGATCGGACGAAAAGGTGGGCGCTGTTGGGTGGTATTTGT TGCTGGTGGTGCTGTTGTTGTTTGTTCAGCAAGCGTATGTGTAGGAGGCT GGACTGCTTTATCATGCGAGACCAGTATATGTCAAGAGGCTAAAGAGGCA GTATTTTGTTCGGGAATCCTGCCATCGTTGCTCCTTTGGCGGAGGTCGGT TGAAAGCAGTAGACAAGCACCGTCCGGATAAGGAGGTCAACACTACAGCT GTACTCCATTCAACTTCTAGCTGTACACAAGCATCACCACTACTGCCTGC GATGGTCTTATCATGGAGCGGAAACTCATTTTTGTTTTGTGTAGGCAAGT GTGAAGTTTAGTTCCTCTCACTTTTACATTTACCAGGTTTGTGGGCTAGT CGCGGTCCTGCATTTGTCTGTTCAGCTCTCCAAGCGTGCGCGCTGCAGGG TTTGCAGGGTTTGAAGCTCTGCGGGGATGCAACAACTGACTGTATACACT CAACACATCATGTAACGTGTGTCACAAAAAACGACCACAAATTGTCTTGT TGAGCCTGATAACCTCAGGGGAGCTGCAACTGTACGTTATCTGATGAGTT CAAAAGATACACTTGTAGATGTATCTTATTCTTTGTGTTCGTCTGGAGAG AGGCGAACACATTGGTGTGTTTGTAAGAATTAAAAAAAAAAAAGAGTCGG AGTTGGAGATATTACTGTCGAGGCTGAGCGTGTGTTGCCATCTGTCGACA AATATTTTCGTTTCTGATCGCTCACCGACTTTCGACCGGGCATGCCTGCT TCTCGACATACGCATGCCCCACATGATGTCAAAATTGTCTTGTTGACACG TCCCAGAAATCGGTGGTACGTTTCACACGGCGTCTAACAAAGCCTGTCCA ATAATCTGCTTCACCTGTCTATCTATGCGATTGCCTATCTGCCTTGCTAC CTTACGGGCCACTCAGGTTCGTACGTTTTGGCAAATCATTAACCGGGGGA GAGCCGGGAGCGTGTCTGCGGACTGGCTGCCATCCGATGAGAAGGTAATT TTTATGACCACGTATCTGAAGCATGACGCTTCAAGTACTTCGTAGGTTTT ACCAAATGCGCTTAGGTACTACTTCGAAGTTTGTTTTTTGGCTTTTGGCG TAGTTACGTACACGGCCATTCGAGCCCCTGGGGGAGGCGCGGGGTCGGAC GTAGAAATTGTCCAGCCGAAAAACCAGCAGGTGACAGCTGTCACCTTGTT TTTGTTATGGATTTGTCTCACCGATTTCGTCTTGTCGCACAATATAGCTG CGCAAGACCAGTGTTGCCATAGTCTCAAGGCCGCTTGGCGCAGCCAAAGA GAGCGCACCTCTCTTGTTGTTGAGATGATGATTCTCGTCAAGTAGAGGAC GAGACGCGAGTGCGCGACCTTCCCGTGGTGCTTGTTCGGTGACAGTGCAG TGACGTCGAAGATAAAACATGAATCGCGGTCCTGTGTACGTTATATTAAC AGGTTGTCACCCTTAATTATCGTGGTTTTAGGCGGTAAGGGATCATTATC GTGTGTGATTCATGGCTTTCCGATGGTTGAGCGGTAAGTGTCAGGTCTAC ATCCCTTCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCCCGGTACC TTTTATGTGGTGTAGTCTCTGTACCACAAAAATTTACGTTCAGCGGCATG CAAAGACGCCGAGATCTTCATCGTGGCGTTAGGGACAATGGACGTTGTCG GGGAGTGCGTGGGGATGCCCGTCGCGGCGATGCGAAAGACGGCGCTAGAC AACTTCGAGGAGGACGAGATGTGCGACACGCTCAAGAACGTCAGAGAGAT CTGCGACGCTCTCAAAGCTGACGGGAAAAAGGTGGGGTTGGGTTGGGTTG GGTTGGGTTGAGCTGGGCTGGGCTGGGATTGGTTGGGTGCTTCACCCCAA CGGCGGCCGTTTAGTGTTCAAAGCCCGTCTTCATAGACCCTTGCGATTTG CGGGTTCAGGTCGAAAGGGCGACGATGGCCTCACGGGGTGGTCACACTTG CTAGCTGTCGTGTTCGTTGTGTAAAACGCTGAACGCACCCCCAATTGAAT CAAATAAAATTACTCTGTCGACCGCCACTCAGGTGATAGTTTGCAACGTC ATGACGTCCGGTGCGGGCATCAACCGCCGAGCGGGCACTGCCAAGCGTCT CAACCGACAGCTGGCTCTCTACGCCAAGGCAACAGCAGCAGCAGCAGCAG CGACAACAACAAAAACAACAGAATGCCCCGTAGAATTGGTCAAGATGAAC AACCCGCGTGCGGCCAGAGAAGACGGCCGCGCTTTCGACGGCCTACACCT CAACGCCCGCGGTTACCGCGCGTTCGCCGGGGCCGTGTACGACGCGCTGG GCCCGATGATGGTGGCGGTGGAGTGGAAGGTCTGGAAGGCTAAGTTGGCG GGAGGACTGACGGTCGGGGTCGAAGGGGGAGGTGGGGGCAGCGGTGCCCC CGTGGCACCTAGCTCTGGAGAGAGCCTCAAGCCCAAGAGCAAGGCTAGGA AAAAGGCTGACTGACTGGTGCGGGAGTGTCACAACACGGATTGTATTTTT CCCACGCGGAGGGCAAATAGGGCAGGGTTACACGACGCAGTTGGAGCTGT GGCTCTAGGGTTGCTTGGTTATGGTGTCAGTGGAAGTGGGGGTGGGGAGA CGTGCGGAGGGGGGTATTCACGGTATCAATAGGGGTTGTCGGGGGGCACG TGGGAGGACCAATGCTGTGTATGCAGGGGAGCGCTAGACCCACTGCGATT ACAATAGCCTTCGAGGGTACTCAGGCAGGGCGGCTAGTGTAGTCACCTTG AGAGCGGTGCCCCTCATTATGCCCACTGGGTTGTCATGGCTGCTACTGCC GGCGACACATACTTTTGAGAGTTCGCTCTGGGGTTGCCATCATGAGCCTT GACGTGAAAACACCACGCGCTCGGTGCTCCGTAGGTGGCCCGTTACTGCC ATCCTTGACGCCCTTCCAGTACCTACACTGTAGCAAAGTTGTGAATATTT GTACTAATTCGATTCCCGCTCCTGGCTGAAAAAACGAAAGAGCTCAAATC AGGCAACGCCGACGCCACTCATCGGGTTGATTTCTAACAAATACACGCGA AGCACGATACTTTTCGTGTTACTTTCTGCTGCTCCAGCGGCTCCCCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig75:286210..290606-

>mRNA_P-littoralis_Contig75.77.1 ID=mRNA_P-littoralis_Contig75.77.1|Name=mRNA_P-littoralis_Contig75.77.1|organism=Pylaiella littoralis U1_48|type=CDS|length=981bp|location=Sequence derived from alignment at P-littoralis_Contig75:286210..290606- (Pylaiella littoralis U1_48)
ATGGGGATTCGCGAGTTTTGGCTGCTGACAAGCTTCTTCCTTGTTGCTTT
GAGAAGGGCGTTGACCGTCGCATGGATTCGGATGAACAAGTTCCTCACGA
GCCCCGACTGGCTTATTCGACCCGTCTCAGACTTTCGACACAAGGTGGTC
CTTATTGGAGATGGCTTTGCGGAGGGCCTGGGGGACTGGGTCGTTATGGG
GGGAATGGCTGGCGTAACGCGGGTGCTCGAGAAACAAGCTGGATCGGACG
AAAAGGTTCGTACGTTTTGGCAAATCATTAACCGGGGGAGAGCCGGGAGC
GTGTCTGCGGACTGGCTGCCATCCGATGAGAAGTCTCTGTACCACAAAAA
TTTACGTTCAGCGGCATGCAAAGACGCCGAGATCTTCATCGTGGCGTTAG
GGACAATGGACGTTGTCGGGGAGTGCGTGGGGATGCCCGTCGCGGCGATG
CGAAAGACGGCGCTAGACAACTTCGAGGAGGACGAGATGTGCGACACGCT
CAAGAACGTCAGAGAGATCTGCGACGCTCTCAAAGCTGACGGGAAAAAGG
TGATAGTTTGCAACGTCATGACGTCCGGTGCGGGCATCAACCGCCGAGCG
GGCACTGCCAAGCGTCTCAACCGACAGCTGGCTCTCTACGCCAAGGCAAC
AGCAGCAGCAGCAGCAGCGACAACAACAAAAACAACAGAATGCCCCGTAG
AATTGGTCAAGATGAACAACCCGCGTGCGGCCAGAGAAGACGGCCGCGCT
TTCGACGGCCTACACCTCAACGCCCGCGGTTACCGCGCGTTCGCCGGGGC
CGTGTACGACGCGCTGGGCCCGATGATGGTGGCGGTGGAGTGGAAGGTCT
GGAAGGCTAAGTTGGCGGGAGGACTGACGGTCGGGGTCGAAGGGGGAGGT
GGGGGCAGCGGTGCCCCCGTGGCACCTAGCTCTGGAGAGAGCCTCAAGCC
CAAGAGCAAGGCTAGGAAAAAGGCTGACTGA
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