mRNA_P-littoralis_Contig75.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig75.7.1
Unique NamemRNA_P-littoralis_Contig75.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: D8LG03_ECTSI (Manganese stabilising protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG03_ECTSI)

HSP 1 Score: 585 bits (1507), Expect = 2.060e-203
Identity = 310/326 (95.09%), Postives = 318/326 (97.55%), Query Frame = 2
Query:   47 MKLAVIAVAISALSPSADAFAPSSAFNGARMAG-ATTTRSSTSTVEMSAASDNFKKAATGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNGGAKIVDMCIEPKNFQVLSKVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ 1021
            MKLAVIAVA+SALSPS DAF PSSAFNGARMAG A TTR+STS VEMSAASD+FKKAATGALAIFAGLSLFTA PS+AI+RDTLD+LSYTQVKGTGLANRCPDV GEDTISV+GGAKIVDMCIEPKNFQVLSKVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQSNYERIPFLFTVKDLVAKAS+GGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVN VDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ
Sbjct:    1 MKLAVIAVALSALSPS-DAFVPSSAFNGARMAGPAATTRASTSAVEMSAASDSFKKAATGALAIFAGLSLFTAPPSEAITRDTLDALSYTQVKGTGLANRCPDVVGEDTISVSGGAKIVDMCIEPKNFQVLSKVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASAGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNTVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ 325          
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: E5RPB1_FUCDI (Oxygen-evolving enhancer protein n=1 Tax=Fucus distichus TaxID=3012 RepID=E5RPB1_FUCDI)

HSP 1 Score: 558 bits (1438), Expect = 5.550e-193
Identity = 290/325 (89.23%), Postives = 307/325 (94.46%), Query Frame = 2
Query:   47 MKLAVIAVAISALSPSADAFAPSSAFNGARMAGATTTRSSTSTVEMSAASDNFKKAATGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNGGAKIVDMCIEPKNFQVLSKVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ 1021
            MKLAV AVAISALSP+ADAFAPSSAFNGARMA    TRSSTS VEM+  SD+FKKAA GALA+FAGLSLFT+ PS+A++RDTLD+LSYTQVKGTGLANRCP+V GEDTISV GG++I+DMCIEPK FQVLS+VARGG MVP MIDTKLMTRETYTLYGIEG+FGNKDGKLTF EKDGIDYAATTIQSNYERIPFLFTVKDLVAKAS GGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAE+FKENNKVFDVTDGNIEFEVN VDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARI+
Sbjct:    1 MKLAVTAVAISALSPAADAFAPSSAFNGARMASVKNTRSSTSAVEMNV-SDDFKKAAAGALAVFAGLSLFTSAPSEAVTRDTLDALSYTQVKGTGLANRCPEVRGEDTISVGGGSEIIDMCIEPKQFQVLSRVARGGKMVPQMIDTKLMTRETYTLYGIEGNFGNKDGKLTFEEKDGIDYAATTIQSNYERIPFLFTVKDLVAKASEGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAELFKENNKVFDVTDGNIEFEVNKVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIE 324          
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: A0A836CCR6_9STRA (Oxygen-evolving enhancer protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCR6_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 2.740e-135
Identity = 226/327 (69.11%), Postives = 259/327 (79.20%), Query Frame = 2
Query:   47 MKLAVIAVAISALSPSADAFAPSSAFNGARMAGATTTRSSTSTVEMSAASDNFKKAATGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNGGAKIVDMCIEPKNFQVLS-KVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ 1021
            MK AV   A++AL  ++   AP   F G+R+AG  T    +S + MSA  D+FK AA GALA+FAGLS F A P+ AI+RD +DSLSY QVKGTGLANRCP+V GE +I+VNG  ++VD+CIEPK FQVL  K  R G      ++TKLMTR+TYTLYGIEG    +DGKLTF E+DGIDYAATT+Q    ER+PFLFTVK+LVAKAS+GGN +KPGFQ GG F+TPSYRTGLFLDPKGRGG TGYDMAVALPGLQSG EGD EMFKENNK FDVTDG IEFEVN VD +AGEIGGVFVSKQKGDTDMGSK PKD+LVKGIFY RI+
Sbjct:    1 MKAAVACAALAALGGASAFQAP---FMGSRVAGKAT---QSSALSMSA-QDDFKAAAAGALAVFAGLS-FLAAPAQAITRDQIDSLSYMQVKGTGLANRCPEVVGEGSITVNGKKQVVDLCIEPKTFQVLEEKEGRKGETKKEYVNTKLMTRQTYTLYGIEGSIAPEDGKLTFREQDGIDYAATTVQLPGGERVPFLFTVKELVAKASTGGNTIKPGFQFGGAFKTPSYRTGLFLDPKGRGGVTGYDMAVALPGLQSGEEGDKEMFKENNKTFDVTDGQIEFEVNRVDTDAGEIGGVFVSKQKGDTDMGSKTPKDMLVKGIFYGRIE 319          
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: E5RPA9_9STRA (Oxygen-evolving enhancer protein n=1 Tax=Botrydium granulatum TaxID=73013 RepID=E5RPA9_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 2.740e-135
Identity = 228/327 (69.72%), Postives = 262/327 (80.12%), Query Frame = 2
Query:   47 MKLAVIAVAISALSPSADAFAPSSAFNGARMAGATTTRSSTSTVEMSAASDNFKKAATGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNGGAKIVDMCIEPKNFQVLSKVA-RGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ 1021
            MK AV   A++ALS ++   AP   F G+R+ G  T   S S V MSA  D FK+AA GALA+FAGLS F A P++AI++D +DSLSY QVKGTGLANRCP+V GE TI+V G  KIVD+CIEPK FQVL + + R G +    ++TKLMTR+TYTLYGIEGD  ++DGKL FTEKDGIDYAATT+Q    ER+PFLFTVK+LVAKA+ GG+ V PGFQ GG F+TPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSG EGD E+F ENNK FDVTDG IEFEVN VD EAGEIGGVFVSKQKGDTDMGSKVPKD+LVKGIFY R++
Sbjct:    1 MKTAVACAAVAALSGASAFQAP---FLGSRVHGKAT---SASAVTMSAQQD-FKQAAAGALAVFAGLS-FLAAPAEAITKDQIDSLSYMQVKGTGLANRCPEVVGEGTINVAGKTKIVDLCIEPKVFQVLEESSSRKGEVKKEYVNTKLMTRQTYTLYGIEGDLTSEDGKLVFTEKDGIDYAATTVQLPGGERVPFLFTVKELVAKAAKGGSSVAPGFQFGGAFKTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGEEGDKELFDENNKTFDVTDGQIEFEVNRVDAEAGEIGGVFVSKQKGDTDMGSKVPKDMLVKGIFYGRLE 319          
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: E5RPB0_VAUFR (Oxygen-evolving enhancer protein n=1 Tax=Vaucheria frigida TaxID=195983 RepID=E5RPB0_VAUFR)

HSP 1 Score: 399 bits (1026), Expect = 6.860e-131
Identity = 221/327 (67.58%), Postives = 254/327 (77.68%), Query Frame = 2
Query:   47 MKLAVIAVAISALSPSADAFAPSSAFNGARMAGATTTRSSTSTVEMS-AASDNFKKAATGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNGGAKIVDMCIEPKNFQVLSKVA-RGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARI 1018
            MK+A+  VA+SA+S S  AF  S  F G+R+        S   V MS  A D+FK  A GALA+FAGLS F A  +DAI++D +DSLSY QVKGTGLANRCP+V G ++I+VNG  K++D+CIEPK FQVL + A + G      ++TKLMTR+TYTLYGIEG F  ++GKLTF EKDGIDYAATT+Q    ER+PFLFTVK+LVAKA++ GN V PGFQ GGGF TPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSG EGD EMFKENNK FDVT G IEFEVN VD  AGEIGGVFVS QKGDTDMGSK PKD+LVKGIFY R+
Sbjct:    1 MKVAISCVALSAIS-SVSAFQTS--FVGSRVKSL-----SRDGVNMSMTAQDDFKNVAVGALAVFAGLSFFGAPAADAITKDQIDSLSYMQVKGTGLANRCPEVIGTESINVNGKMKLMDLCIEPKVFQVLEETATKKGETKKEYVNTKLMTRQTYTLYGIEGSFAPEEGKLTFREKDGIDYAATTVQLPGGERVPFLFTVKELVAKAATSGNSVAPGFQFGGGFSTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGEEGDKEMFKENNKTFDVTKGQIEFEVNRVDASAGEIGGVFVSNQKGDTDMGSKTPKDVLVKGIFYGRL 319          
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: B7SSL7_ELYCH (Photosystem II extrinsic protein O n=2 Tax=Eukaryota TaxID=2759 RepID=B7SSL7_ELYCH)

HSP 1 Score: 382 bits (980), Expect = 5.010e-124
Identity = 210/327 (64.22%), Postives = 246/327 (75.23%), Query Frame = 2
Query:   47 MKLAVIAVAISALSPSADAFAPSSAFNGARMAGATTTRSSTSTVEMSAASDNFKKAATGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNGGAKIVDMCIEPKNFQVLSKVA-RGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ 1021
            MK+    VA+SA S    AF P+        AG  T   S+S + MS   D+ K  A GAL I AG+S+  A P +AI++D ++SLSY QVKGTGLANRCP+V G  +I VNG  KIVDMCIEPK FQVL + + + G      ++TKLMTR+TYTLYGI+G F  ++GK+TF EKDGIDYAATTIQ    ER+PFLFTVK+LVA+A++ GN V PG Q GG F TPSYRTGLFLDPKGRGGSTGYDMAVALPG QSG+EGDAE+F ENNK FDVT GNIEFEVN VD   GEIGGVFVSKQKGDTDMGSKVPKD+L+KGIFY R++
Sbjct:    1 MKVPSALVALSAFSVKTSAFRPA-------FAGLKTNAKSSSALTMSV-QDDIKTLAVGALTILAGVSILNA-PVEAITKDQIESLSYLQVKGTGLANRCPEVFGTGSIDVNGKTKIVDMCIEPKTFQVLEETSSKRGEAKKEYVNTKLMTRQTYTLYGIDGSFAPENGKITFREKDGIDYAATTIQLPGGERVPFLFTVKELVAQATTPGNSVTPGLQFGGPFSTPSYRTGLFLDPKGRGGSTGYDMAVALPGKQSGIEGDAELFGENNKTFDVTKGNIEFEVNRVDPSNGEIGGVFVSKQKGDTDMGSKVPKDLLIKGIFYGRLE 318          
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: A0A7S2UVF7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVF7_9STRA)

HSP 1 Score: 363 bits (932), Expect = 4.850e-117
Identity = 197/292 (67.47%), Postives = 229/292 (78.42%), Query Frame = 2
Query:  152 TTRSSTSTVEMSAASDNFKKAATGA-LAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNGGAKIVDMCIEPKNFQVLSKVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ 1021
            TTRSS+STV   +A +N  K AT A LA F GLS     PS+AI+ + L  LSY QVKGTGLANRCPDV GEDTIS++G  K+VDMCIEPK FQV      G   V    +TKLMTR+TYTL GI+GD    DGK+ FTEKDGIDY+ATT+Q    ER+PFLFTVK+LVAKA+ GG+  K G  + G FRTPSYRTGLFLDPKGRGG+TGYDMAVALPG+Q+G +GD E++KENNK FDVTDG IEF++  V+KE GEIGGVFVS+QKGDTDMGSKVPKDIL+KGIFYARI+
Sbjct:   26 TTRSSSSTVMTMSAENNLPKIATAAALAAFTGLSAM--APSNAITSEVLRQLSYEQVKGTGLANRCPDVVGEDTISISGKKKLVDMCIEPKIFQV----KEGSEYV----NTKLMTRQTYTLDGIDGDIKMADGKIQFTEKDGIDYSATTVQLPGGERVPFLFTVKELVAKATEGGSDFKVGLGLSGDFRTPSYRTGLFLDPKGRGGTTGYDMAVALPGIQNGEDGDEELYKENNKTFDVTDGKIEFQIQKVNKEEGEIGGVFVSRQKGDTDMGSKVPKDILLKGIFYARIE 307          
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: PSBO_CHAMQ (Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=PSBO_CHAMQ)

HSP 1 Score: 348 bits (894), Expect = 3.330e-111
Identity = 200/325 (61.54%), Postives = 237/325 (72.92%), Query Frame = 2
Query:   56 AVIAVAISALSPSADAFAPSSAFNGARMAGATTTRSSTSTVEMSAA-SDNFKKAATGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNG-GAKIVDMCIEPKNFQVLSKVA-RGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQS-NYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARI 1018
            AVIAV I+ +  +  AF P+++F+  + AG           +MS A  D  KKAA  ALA    LS+   +PS AI+++ L SL Y QVKGTGLANRCP+V G D+I V G G +IVD+CIEPK FQVL +   + G +    I+TKLMTR+TYTL GI GD    DGK+ FTE DGIDYAATT+Q    ER+PFLFTVK+LVAKAS+GGN + PGFQMGG F  PSYRTGLFLDPKGRG +TGYDMAVALPG+QSGVEGD E+F+ENNKVFDV  G IEFEVN V+ E GEIGGVFVS Q  DTDMGSK P+ +L+KGIFY RI
Sbjct:    3 AVIAVFITLMLTAVVAFQPAASFSAPKCAG-----------KMSMAIEDAPKKAAAAALAALTTLSVI--SPSFAITKEELRSLDYLQVKGTGLANRCPEVKGTDSIKVKGAGQEIVDLCIEPKTFQVLEETRNKKGELSKEFINTKLMTRQTYTLDGISGDLNVVDGKIQFTELDGIDYAATTVQKPGGERVPFLFTVKELVAKASAGGNTIAPGFQMGGKFVVPSYRTGLFLDPKGRGATTGYDMAVALPGIQSGVEGDEELFRENNKVFDVLSGQIEFEVNRVNLEEGEIGGVFVSTQGSDTDMGSKSPETVLLKGIFYGRI 314          
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: Q7X9V5_HETAK (Oxygen-evolving enhancer 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=Q7X9V5_HETAK)

HSP 1 Score: 333 bits (853), Expect = 2.410e-105
Identity = 177/276 (64.13%), Postives = 213/276 (77.17%), Query Frame = 2
Query:  200 NFKKAATGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNGGAKIVDMCIEPKNFQVLS-KVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQS-NYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ 1021
            N K+ A  ALA    L+  +A    AI++   +SL Y QVKGTGLANRC +V G D+I+++G  ++VD+CIEPK FQV   KVA+ G++  A ++TKLMTR+TYTL GI G   +KDGK+ FTE+DGIDYAA+T+Q    ER+PFLFTVK+LVA AS+ G+++ PGFQMGG F  PSYRTGLFLDPKGRG STGYDMAVALPG QSGVEGDAE+FKENNKVFDV  G IEFEVN V+ E GEIGGVFVS Q  DTDMG K P+ IL+KGIFY RI+
Sbjct:   29 NGKQIAAAALAAGTALAPMSAF---AITKAESNSLDYLQVKGTGLANRCSEVIGTDSITISGKKQLVDLCIEPKTFQVEEEKVAKSGSIQKAFVNTKLMTRQTYTLDGISGTISSKDGKIVFTEEDGIDYAASTVQKPGGERVPFLFTVKELVATASTSGDKIAPGFQMGGKFTVPSYRTGLFLDPKGRGMSTGYDMAVALPGKQSGVEGDAELFKENNKVFDVLGGQIEFEVNRVNAEEGEIGGVFVSTQASDTDMGGKEPQTILLKGIFYGRIE 301          
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Match: A0A7S3P902_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P902_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.010e-104
Identity = 192/323 (59.44%), Postives = 229/323 (70.90%), Query Frame = 2
Query:   65 AVAISALSPSADAFAPSSAFNGARMAGATTTRSSTSTVEMSAASD--NFKKAA-TGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRCPDVSGEDTISVNGGAKIVDMCIEPKNFQVLSKVARGGNMVPAMIDTKLMTRETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQ-SNYERIPFLFTVKDLVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQKGDTDMGSKVPKDILVKGIFYARIQ 1021
            A A+ A + SA AFAP           A T+R ST+ +EMS   D  N  KAA  GALA+  GL    A P+ A+++  ++ LSY QVKGTGLANRC +V GE +IS   G ++VDMCIEPK F +  ++ R G      ++ K+MTR+TY+L GIEG      G + FTE++GIDYAATT+Q    ER+PFLFTVKDLVAK S  G+  KPGFQMGG F TPSYRTGLFLDPKGRGG+TGYDMAVALPGLQSG EGD E+FKENNK FD+T G IE EVN V+ E  EIGGVFV+ Q GDTDMGSKVPK IL KGIFYAR++
Sbjct:   10 AAAVLAFAASASAFAP-----------APTSRHSTA-MEMSLKKDLENVGKAALAGALAV--GL---VAAPAQALTKSQINELSYLQVKGTGLANRCSEVIGEGSISPKAGQRLVDMCIEPKAFAIEEEIGRAGKTEKKFVNAKVMTRQTYSLDGIEGKLDVNGGNIVFTEQEGIDYAATTLQLPGGERVPFLFTVKDLVAKGS--GSTFKPGFQMGGDFNTPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDDELFKENNKTFDITTGRIEMEVNKVNVEESEIGGVFVATQLGDTDMGSKVPKKILTKGIFYARVE 313          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG03_ECTSI2.060e-20395.09Manganese stabilising protein n=2 Tax=Ectocarpus T... [more]
E5RPB1_FUCDI5.550e-19389.23Oxygen-evolving enhancer protein n=1 Tax=Fucus dis... [more]
A0A836CCR6_9STRA2.740e-13569.11Oxygen-evolving enhancer protein n=2 Tax=Tribonema... [more]
E5RPA9_9STRA2.740e-13569.72Oxygen-evolving enhancer protein n=1 Tax=Botrydium... [more]
E5RPB0_VAUFR6.860e-13167.58Oxygen-evolving enhancer protein n=1 Tax=Vaucheria... [more]
B7SSL7_ELYCH5.010e-12464.22Photosystem II extrinsic protein O n=2 Tax=Eukaryo... [more]
A0A7S2UVF7_9STRA4.850e-11767.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
PSBO_CHAMQ3.330e-11161.54Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
Q7X9V5_HETAK2.410e-10564.13Oxygen-evolving enhancer 1 n=1 Tax=Heterosigma aka... [more]
A0A7S3P902_9STRA1.010e-10459.44Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:23440..29661 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LG03
Preferred namePsbO
PFAMsMSP
Model size2199
Max annot lvl2759|Eukaryota
KEGG koko:K02716
KEGG Pathwayko00195,ko01100,map00195,map01100
Hectar predicted targeting categorychloroplast
Exons5
Evalue7.44e-211
EggNOG OGs28JI2@1|root,2QRXA@2759|Eukaryota
Ec32 ortholog descriptionmanganese stabilising protein
Ec32 orthologEc-21_005100.1
Descriptionoxygen evolving activity
Cds size978
COG categoryS
BRITEko00000,ko00001,ko00194
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.7.1prot_P-littoralis_Contig75.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig75 23486..28486 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791544.5421436-UTR-P-littoralis_Contig75:23439..234851680791544.5421436-UTR-P-littoralis_Contig75:23439..23485Pylaiella littoralis U1_48UTRP-littoralis_Contig75 23440..23485 +
1680791544.6192038-UTR-P-littoralis_Contig75:28486..296611680791544.6192038-UTR-P-littoralis_Contig75:28486..29661Pylaiella littoralis U1_48UTRP-littoralis_Contig75 28487..29661 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791544.555017-CDS-P-littoralis_Contig75:23485..238811680791544.555017-CDS-P-littoralis_Contig75:23485..23881Pylaiella littoralis U1_48CDSP-littoralis_Contig75 23486..23881 +
1680791544.569366-CDS-P-littoralis_Contig75:25829..259581680791544.569366-CDS-P-littoralis_Contig75:25829..25958Pylaiella littoralis U1_48CDSP-littoralis_Contig75 25830..25958 +
1680791544.5796905-CDS-P-littoralis_Contig75:27339..276941680791544.5796905-CDS-P-littoralis_Contig75:27339..27694Pylaiella littoralis U1_48CDSP-littoralis_Contig75 27340..27694 +
1680791544.5938654-CDS-P-littoralis_Contig75:27938..280101680791544.5938654-CDS-P-littoralis_Contig75:27938..28010Pylaiella littoralis U1_48CDSP-littoralis_Contig75 27939..28010 +
1680791544.6089485-CDS-P-littoralis_Contig75:28460..284861680791544.6089485-CDS-P-littoralis_Contig75:28460..28486Pylaiella littoralis U1_48CDSP-littoralis_Contig75 28461..28486 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig75.7.1

>prot_P-littoralis_Contig75.7.1 ID=prot_P-littoralis_Contig75.7.1|Name=mRNA_P-littoralis_Contig75.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=326bp
MKLAVIAVAISALSPSADAFAPSSAFNGARMAGATTTRSSTSTVEMSAAS
DNFKKAATGALAIFAGLSLFTATPSDAISRDTLDSLSYTQVKGTGLANRC
PDVSGEDTISVNGGAKIVDMCIEPKNFQVLSKVARGGNMVPAMIDTKLMT
RETYTLYGIEGDFGNKDGKLTFTEKDGIDYAATTIQSNYERIPFLFTVKD
LVAKASSGGNQVKPGFQMGGGFRTPSYRTGLFLDPKGRGGSTGYDMAVAL
PGLQSGVEGDAEMFKENNKVFDVTDGNIEFEVNNVDKEAGEIGGVFVSKQ
KGDTDMGSKVPKDILVKGIFYARIQ*
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mRNA from alignment at P-littoralis_Contig75:23440..29661+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig75.7.1 ID=mRNA_P-littoralis_Contig75.7.1|Name=mRNA_P-littoralis_Contig75.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6222bp|location=Sequence derived from alignment at P-littoralis_Contig75:23440..29661+ (Pylaiella littoralis U1_48)
CTCTCCGATAGTAGTGCTTGACTGCCACCCTCTCACACAAAGCATCATGA AGCTCGCCGTGATCGCCGTCGCAATTTCTGCGCTCAGCCCGTCGGCTGAC GCCTTTGCTCCCTCTTCGGCCTTCAACGGAGCCCGAATGGCCGGCGCGAC CACCACGCGCTCGTCCACCTCCACCGTGGAGATGTCTGCCGCATCGGACA ACTTCAAGAAGGCGGCGACCGGAGCATTGGCAATCTTCGCTGGGCTCTCC CTCTTTACCGCGACCCCGTCCGACGCGATCTCGAGGGATACGCTGGACTC GCTTTCGTACACTCAGGTGAAGGGTACTGGCCTCGCCAACCGATGCCCGG ATGTTTCGGGAGAGGACACCATCAGCGTGAACGGCGGGGCGAAGATCGTT GACATGTGCATCGAGCCCAAGAACTTCCAGGTGTTGTCTAAGGTGAGAGA GCGAGAGGGCGAACGAGTCTGCTGGCCGGCGGCTTTGGCCAGCTTTGCTT ATAGCAGGTGCTCGTTGACATTCTATAGCATGCCATCCATCTGTGCCATG TGCATGTTGTTTTTTCATGTTTTTCTCGTTCGCACGATGTTTGTCTTGAA AATTATACAGGGAGTTGCGAACCGTCCCCCCTTACTTACCCGTGGGTCGT GGTCGGTTGCATCTCGCAGTTTCTTCCCTTTTAGTGTTTTCGACGCCCAT CGCAGGCCTGGTAGATTGGACACCATTGGTGCGCAAACGCAAAAGCACAG GTGTCGAGCATGACTGAACGCACTGAAATCGTACCAGTTTTGTAGCAGCA GCAGTGCACATCGGTCGTTTGGTTGGGACCGTCCGAAAGCATGCGATTTT TCTCGTTCAAGTACTTGTATACAAGGAGGCTCGGGTTGTGCGCACAAAGT CTTCCAAAACACGCTTACCCAAAGTGCAGTGAGTCATTCCCTTCTGGATT TCCTCGCCTGTAGCCATCAGATAACTGCTGTGGCGAAGGCAGCAGCTGTT GCTATCGCTGCCTCCCTTACTCAGGCAGCTTGTTGGTCATCTCTCTAGGA AGCAAGGACAACACACAAATTGTCTTGAAGTTGCACACCTACCCAAACAT CATATTCGCACCAAATCATATCATACGTTGCACAAACAAAATTATGTGCT TCCCTCTTCAATATGTACTGCCCAGGGCACCTACCTCTTCAAACGATAGA ACGCACTCGACGTGCATCCCCTTTGAGGAATCTTACAGATGGGTCGGGTG TGTTTTATCTTATTCCTAGCATGCGTTTCGAAGAGCAGTCCTGTCGACAC GGTCCTGTTTTCTCCAAGAGATTGGTACTGTACAGAGATACGCGCACGAA AATTGGGGCGCTGTATCGTGTTGCAAGTCCATTTTGGTGTTCGCTACCGA GTCCGCTTGTGATGAAAAGCCGTAAAGCAGTACTCTCGAGTATTTTTGTT CGATTGCCCGTGTCATTCAGCCTTCATACGTCGTTGAAGGTCTACAGCAG CCGGTAACTTTCAAGTATGTCGACAGCAATATCTCCTACTTTCAAAGTCA ACGTGATACCGGGAATACATGACTACCCGGTACGAAGTTAGTACGCCTCT AGTATCAATATATTGTGCAGAAACGCCCGCACAGCGAATCATGGGACTAA AGTGTGCGCAGGCACATGTGACATCGATTTGACTCGACCCACAATGCTAG GTAGTCCATGAACACGTCCTCCCCAAGTTTGAACCACGCGTTCTTTCTTT CCCACCGCAGTAGCATCCACAGCAGCCTGGTTTAGTAGAACGGGCTTTTT TGGTACCACTGTCCCGTTCCATTCGTCAGCAACAAAAATGTAGACGTGCG TACCCCGAAATGTATCTCACGCGGCACATGGTGAACGACATTTCGTTGCC GTCCCGCCCGCCTGCAGTAGAGCGCAGCAATTGCGGTATACAGCAGTAGT CATTTCAGGCTCGTGATTCTCGACGCGGCGAAGTACCAAATCGTTTCATT GAACCTCACTTCGAAATCCTCGGAAGAGACGAGATTCTGGTTTTTGATCA CGTCTTGACGTTCATTCACTCTTGTGTTTCCCAACTAGCGACGTCCGGAT TCTGATGCGTGGTCGGTAGTACAGCAGTACAAGTACGAGATATGTTGAAC AAACAGTACAGAAGTTTGGTGTCTGGTGTTTTCAAATAGCTGTCGCGGGG ACCTTGTTGTCAACTCACAACAGAAAAGCGGGTGTCGAGGTTTTCAATTG TTGTTCTCAGGTATTGTGCTCCCAGGTCAACGACGGCCACTTTACAAAAA GAGCCTGCCGCCGACACAATTAGTGTGAAATGTTCAAGACAAGATCGTTT ACTGTATCATTCTTGATTTCGCTCGCTTGTCGCTTACTAGGTTGCACGGG GAGGCAACATGGTGCCGGCGATGATCGACACCAAGCTCATGACGCGTGAG ACGTACACCCTGTACGGTATCGAGGGAGACTTTGGCAACAAGGACGGCAA GCTCACCTTCACCGAGAAGGTGCGTCCGTTCGTTGGTGTGTTGTGTTGTC GTCTGCACCCAGTTTCAAACTCGCATTCTCATGGGTGGAGCGCAGCTGTA GCGACCGCTGCTGTCTAGTGGCCTGGTGCGTCTGAGTGCCTTCGTGTCTT TTTTCCTCTCACCCACCCGCTGGTTGTGCAAAAGGTCTTGTTTGTTACCT GCTGCTTTTGCTTCGTACTTGCCTGCTCTGTCGCTGCCGCTTTTCCCCCG AGTGATCGCTGTTGCGCAACAGTTCATGTACTAAATAAAGTCGCCAAGTC GCCGCGTTTATTACACGAAATCCCGGTGCTGGTAGGTTTTCAACGATACC CTGTCGTCGAATCTCTTGCATTCGGCGAAAAAGACTATAGTATATACTTC CTCTGTATCATAAGTCTGTGCCGTTATGGGCGTGTTATTGTTTGCGCATC CATACTGTTTCGATCATCCTATAGTTAGGTTCGTTCGAAAGATGAAGTCT CAAAGAAACTGATGCAGAAAAAAAAACAGTTGTTGAAACTAAAAATGAAG TCAAAATATGCCCATTTTCAGAATTTTGATTCCGCCAGATATTTTGGTTT TAGAGCAGAGTCCCAAGTATCTTCGTGTTAGTGTGGCAAACCCCAAGTGT CTTGATTTTAGCGTCGCGTCACATTATACTGATTTTAGTCAGGGACTCGA CATGAATCTTTGAGGTAGGGGGGCTAGGTTCAGGGTTAGGGATAATTTTG GGGGGATTGCATTGGTTTTTTTTTTGCCCCCGCCCCCCACTCCACCTCTG GAAAGGGTTAAAAACGGCCATTTTTGGCCTGACTACTTTTTTGTTAGCCG CTAGCCCATGCGCAGGGACTTACGTTACTCTCAGGGCCGGTACACATGCC CCGTCTCGGGGCGCCGCCCGCTACATGCGACACCCTTTACATCCGTTGTC GCGCGTGGAAAGAACATTAATCTGGAACCGGATCACATCACGGCAGCCGT ACTGTTTTCTGGTCTGTTGTGTGCGGGGTAGATAAAAATGGCTGCAGAAA GCGCGGCATGCAACAGTCGGCGTGGACGGCAGTATGCGTCCTGACCGGTA GCTACACGGAAGGAAGCCAAGATCAACCTCAAGAGTGGGATCAACATGGA GCCAAAAGTGGAGGACAATGAAAGCTCTCGAATGACAACCGTAAAGAACC CCGACTGAAGTCGAGCTAGATATCAAAAACCCTCCCGAGGACATTCGTAA ATTTCCTGATAATACAGTGCGAAAGCCCGCCGGTGTCTCACAGACACCGA AGACTTTTGGCACTCGCGTTCGGAGCAGATGAGACGACCCTCCCACGCAT GTTGAAATCTCTTGTCTCCTGTCGCGTTGTTTTTTCCTTCTTTTTCCCAG GACGGCATCGACTACGCCGCCACCACCATCCAGTCCAACTACGAGCGCAT CCCGTTCCTCTTCACCGTGAAGGACCTCGTCGCCAAGGCTTCCTCGGGTG GCAACCAGGTCAAGCCTGGCTTCCAGATGGGCGGCGGCTTCCGCACCCCG TCGTACCGCACGGGTCTGTTCCTTGACCCCAAGGGCCGCGGTGGATCCAC CGGTTACGACATGGCCGTTGCGCTGCCGGGACTTCAGTCTGGTGTTGAGG GGGACGCAGAAATGTTCAAGGAGAACAACAAGGTGTTCGATGTAACGGAC GGCAACATCGAGTTCGAGGTTAACAACGTTGACAAGGAGGCGGGAGAGAT CGGAGGTATGTGCACATGTTTTCACATTGGCAACGGGTTAAATTCGCAAA AGAGTGTAGGGTCGGTTGACCGTAGTGTAATTTTTCATGCTCGCCCGTTC GGAGGAGCATAATAGCTCCATACTTTTACGGACAAAAAGTCTTGGGAGTT GGCAGAGAACACATTGTGTCTTGAGCCTCGTGTTGCGATGGGGACCTGCA CGATCGTACTGCGCTGAAAGAACATTGCCCTGTCTTGGTCACCCGTTAGG TGTGTTTGTTTCGAAGCAAAAGGGTGACACCGACATGGGCTCCAAGGTGC CCAAGGACATCCTCGTCAAGGGTAAGTGAAACGAGATTTTTCTTGTAATC TCGTATGATGCAGTGTGTGTTGTCATCCCTTTAATTGGACGCCACTCTGC ACCTTTCGGGTAGGTCGACGCTCCAACTGGGGTCACACAAGTGGAAGTCG AAATAGTATTTTTTTTCTCCACTTCCCTCTGCGTTGCTTGCCTTGTTTTG GTCGAGCTTTCTATTGCGAGGAAGGGGACAGCGGTCCCTTTCCCTCGTCG ATAGTGCGATCGAATTTTCGTTTACTCACGAATTTATCGCTTTCCACTTT CACGCGATGTATGAGATGATGACGAGGTACCGCTACTCGGGTGTTTGATG ACCCCAAATTCCATTGCATGCGACATTGAACGCCGTGGCTCATTATTTCA TCCCCCGGTTTCCTCCGTGCCCTTTCGCCGGGTGACCATCCACTGCTGCC TTGCGTCTGTTTGATCGGCAGGTATCTTCTACGCCCGCATCCAGTAGAAA GTCACTTTAGTTTCCCACGTTTTGGGGGAGAGAAGGAATGGGCCAGTTTG ACACTTTCGACATAAGTTGGCTACCAACGTCACCAGAAGGGAGAGCCAGG CATGGTCGGAGGCGACGGCGACGGATCGCCTGATTTTGTTTCGGCGATTA CACCAGCCAATGGTCTCGCCGAAACGGTCGTTTGTTTCGCGCGGTCGCCT TACGCCCCGAGTAGGCGCAAGATCACGGCTCGTTGTATGAAGAGCATGAC GCGATTTTCCCGATTTAGCATAGTGCGGCCTGTGATCGCGTCGGTCTTTA ATCAACCTGTTGTAATTCGGTGCATCGGAAAGAGCGCGACTAGAGTGTTT TGACAAGTGGGCAGCATTTTGAAAAGGGTTTTTGGTATGTTGAGTCGTTT TTGTGTGGTACCATTTTTAGAGAAATATATTTTTTGACCGGCCGGTTTTT TTGGTTTGCTGCTCCCTTTGCCGTTGTCATGCACGGTGTTGTATCCTGCG GAGGGCAGAGTAGTGACCGACCTTCTCGAAATAATAAAACCGGGTCGCTT TTCTTAATCAGGCCTTTCACGCGGGAACGCGACAAGGGTTTATGTTGGTT GGCACTTGGCTGTTTTTTCTTCTCATCGTATCCTTTTTTTTTTATCCGCT TTGTTGTCTAGGTCGGCAGGCGGACTTAAGCTTGTTTAATTTCTTCGCCG TGAAGTGGCAAGCGAACTCAACGAAATATGAAGGAACTATGCCCGTATCG ACAACCGGGCAGGGGCGAAAAATAGTTGTCCGGAAGTCTTGTATGACGTC ATGCAACAGCTCTCACCAGTAAGGGTTTTTGTCTAGTGACGACCGATGAA ACAGGAGTCAACCCACCTTTCTATCTGTGGAATGGTCGCGGCCGTAAGAA AGGACCTGCGGTTAACATTTCGACTCGTTCGCGACTGTTTTTCCCTCGCG AGATGGATCGGTTGCTGCTCGTACGGGACACGGGTTTCCTCGTAGTGACT TCCATCAAAGAAACGATGGTTTTCGTATCTTGTCACTGCGGCCACAGAAC TGTCCCTCTGTCAAAAAATTTGATGAACAATATCTTTGATACTATAGGCT GGTTCACGTGAGAAACATCAAATTTAGTCAACACACCGCCCCGAACGCAA TAAACCACCGATCACAACAAAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig75:23440..29661+

>mRNA_P-littoralis_Contig75.7.1 ID=mRNA_P-littoralis_Contig75.7.1|Name=mRNA_P-littoralis_Contig75.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=978bp|location=Sequence derived from alignment at P-littoralis_Contig75:23440..29661+ (Pylaiella littoralis U1_48)
ATGAAGCTCGCCGTGATCGCCGTCGCAATTTCTGCGCTCAGCCCGTCGGC
TGACGCCTTTGCTCCCTCTTCGGCCTTCAACGGAGCCCGAATGGCCGGCG
CGACCACCACGCGCTCGTCCACCTCCACCGTGGAGATGTCTGCCGCATCG
GACAACTTCAAGAAGGCGGCGACCGGAGCATTGGCAATCTTCGCTGGGCT
CTCCCTCTTTACCGCGACCCCGTCCGACGCGATCTCGAGGGATACGCTGG
ACTCGCTTTCGTACACTCAGGTGAAGGGTACTGGCCTCGCCAACCGATGC
CCGGATGTTTCGGGAGAGGACACCATCAGCGTGAACGGCGGGGCGAAGAT
CGTTGACATGTGCATCGAGCCCAAGAACTTCCAGGTGTTGTCTAAGGTTG
CACGGGGAGGCAACATGGTGCCGGCGATGATCGACACCAAGCTCATGACG
CGTGAGACGTACACCCTGTACGGTATCGAGGGAGACTTTGGCAACAAGGA
CGGCAAGCTCACCTTCACCGAGAAGGACGGCATCGACTACGCCGCCACCA
CCATCCAGTCCAACTACGAGCGCATCCCGTTCCTCTTCACCGTGAAGGAC
CTCGTCGCCAAGGCTTCCTCGGGTGGCAACCAGGTCAAGCCTGGCTTCCA
GATGGGCGGCGGCTTCCGCACCCCGTCGTACCGCACGGGTCTGTTCCTTG
ACCCCAAGGGCCGCGGTGGATCCACCGGTTACGACATGGCCGTTGCGCTG
CCGGGACTTCAGTCTGGTGTTGAGGGGGACGCAGAAATGTTCAAGGAGAA
CAACAAGGTGTTCGATGTAACGGACGGCAACATCGAGTTCGAGGTTAACA
ACGTTGACAAGGAGGCGGGAGAGATCGGAGGTGTGTTTGTTTCGAAGCAA
AAGGGTGACACCGACATGGGCTCCAAGGTGCCCAAGGACATCCTCGTCAA
GGGTATCTTCTACGCCCGCATCCAGTAG
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