mRNA_P-littoralis_Contig75.17.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: D8LG07_ECTSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG07_ECTSI) HSP 1 Score: 372 bits (956), Expect = 8.620e-124 Identity = 188/230 (81.74%), Postives = 210/230 (91.30%), Query Frame = 3
Query: 207 KVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGAPAGRDKVWKDNVRWVQGDIFKPELYAAELSDATGVVSCVGAFGSNEQMEKICGDATVAATEAAEKAGVENFVFISAAGAQHEHALLAGYWKGKQKAEKAILERFPEGGVILRAPGIYGDRDVGSVTVPLGAWMRPMEMLFSLAPFSALRSASALEAVLTPPVAVENVARVAAAGALGLSPKAGVLLVDDINQIAKE 896
+V+VFGG+GFVGQNVCQAAL MGADVVSVNRSGAP G+DK WKD VRWVQ DIFKPE YA ELS A GVVSCVGAFGS++Q+EKICGDATVAATEAAEKA VE FVFISAAGAQH+H ++ GYWKGKQKAEKAILERFP+GGV+LRAPGIYGDRDVG VT+PLGA MRPMEMLF+LAPF+A+RS+S LEA+LTPPVAVENV+RVAAAGALGL P GVLLVDDIN++A +
Sbjct: 9 QVIVFGGSGFVGQNVCQAALRMGADVVSVNRSGAPTGKDKAWKDKVRWVQADIFKPEDYAVELSGAAGVVSCVGAFGSDQQVEKICGDATVAATEAAEKADVERFVFISAAGAQHDHPVMKGYWKGKQKAEKAILERFPDGGVVLRAPGIYGDRDVGPVTIPLGALMRPMEMLFNLAPFAAVRSSSPLEAMLTPPVAVENVSRVAAAGALGLVP-GGVLLVDDINRLATD 237
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: A0A835ZEQ4_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ4_9STRA) HSP 1 Score: 236 bits (603), Expect = 6.000e-70 Identity = 133/231 (57.58%), Postives = 164/231 (71.00%), Query Frame = 3
Query: 207 KVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGAPAGRDKVWKDNVRWVQGDIFKPELYAAELSDATGVVSCVGAFGSNEQMEKICGDATVAATEAAEKAGVENFVFISAAGAQHEHALLAGYWKGKQKAEKAILERFPEGGVILRAPGIYGDRDVGSVTVPLGAWMRPMEMLFSLA-PFSALRSASALEAVLTPPVAVENVARVAAAGALGLSPKAGVLLVDDINQIAKE 896
+VVVFGG+GFVGQ+VCQAAL +G DVVS +RSG+P W +V+W++GDIFKPE YAAEL ATGVV+CVGAFG++E ME++CGDA VAA EAA A V +FVF+SAAGA H LL GY+ GK KAE A+ +P+ GV LR IYGDR V V VPLGA P+E + SL PF+ALR S EA TPP V V R AA ALG + +A +L V+DIN++A +
Sbjct: 77 QVVVFGGSGFVGQSVCQAALALGCDVVSFSRSGSPEQAPS-WASDVQWLKGDIFKPEDYAAELVGATGVVTCVGAFGTDEFMERVCGDANVAAAEAAAAARVPHFVFVSAAGAARAHLLLRGYYAGKAKAEAAVARLYPDTGVCLRPGAIYGDRVVRGVRVPLGAVFAPLERVLSLGGPFAALRD-SPFEAAFTPPADVRAVGRAAALAALGRADRA-LLSVEDINRLAAD 304
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: A0A4D9D7P2_9STRA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7P2_9STRA) HSP 1 Score: 203 bits (517), Expect = 2.690e-57 Identity = 119/237 (50.21%), Postives = 152/237 (64.14%), Query Frame = 3
Query: 216 VFGGNGFVGQNVCQAALLMGADVVSVNRSGAPAGRDKVWKDNVRWVQGDIFKPELYAAELSDATGVVSCVGAFGSNEQMEKICGDATVAATEAAEKAGVENFVFISAAGAQHEHALLAGYWKGKQKAEKAILERFPEG-GVILRAPGIYGDRDVGSVTVPLGAWMRPMEMLFSLAPFSALRSA-SALEAVLTPPVAVENVARVAAAGALGLS-------PKAGVLLVDDINQIAKEV 899
V GG+G+VGQ+V QAAL GAD VS+NRSG P W V+WV DIF + EL ATGVVSC+GAFGSNE MEKI GDA V A E A K V +FV++S LL GY+ GK++AE+A+L FP G G++LR +YG R VG +++PL RP+E+LF PF +LR +A+L PPVAV+ VA VAAAGA+G + + GVL VDDI ++A+EV
Sbjct: 73 VLGGSGYVGQHVLQAALYRGADAVSINRSGIP-NTSGSWLSQVKWVAADIFNSSAWNKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMKVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPISLPLAVVGRPLELLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDTRVKAGEGAREGVLSVDDIVRVAREV 308
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: A0A7S2USW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USW7_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.570e-52 Identity = 110/255 (43.14%), Postives = 156/255 (61.18%), Query Frame = 3
Query: 153 IRALSQGQGTSSQKDDIPKVVVFGGNGFVGQNVCQAA-LLMGADVVSVNRSGAPA--GRDKVWKDNVRWVQGDIFKPELYAAELSDATGVVSCVGAFGS-NEQMEKICGDATVAATEAAEKAGVENFVFISAAGAQHEHALLAGYWKGKQKAEKAILERFPEGGVILRAPGIYGDRDVGS-VTVPLGAWMRPMEMLFSLAPFSALRSA-SALEAVLTPPVAVENVARVAAAGALGLSPKAGVLLVDDINQIAKEV 899
+R + + TSS + KVVV GGNG+VGQ VC+ A +M +VVS++RSGAP G +K W + W +GD+ + + L ATGVVSC+GAF S N+ ME GD +AA + A+ AGV NFVF+S +LAGY+KGK++AE +LE FP+ GV+LR +YG R VG +++PL +PM+M+FS PF L S +A+L PV VE V AAAGA+ + G++ D+ ++AK +
Sbjct: 10 VRNVLRSLSTSSNQSTEQKVVVLGGNGYVGQQVCKMAKTMMNCEVVSISRSGAPNFDGAEK-WTQEISWEKGDVLEASTWKDHLDGATGVVSCIGAFASTNDAMEYANGDTNIAAAKTAKAAGVANFVFVSTVENNLPEFVLAGYFKGKRRAEDQVLESFPQTGVVLRPSFVYGSRAVGKGISIPLWLVGKPMDMIFSTPPFEVLASTLPGAQAILAAPVPVETVGLCAAAGAVAKLGQTGIVSTKDMKRLAKAL 263
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: I0Z248_COCSC (NAD(P)-binding protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z248_COCSC) HSP 1 Score: 182 bits (463), Expect = 2.150e-50 Identity = 103/228 (45.18%), Postives = 137/228 (60.09%), Query Frame = 3
Query: 204 PKVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGAPAGRDKVWKDNVRWVQGDIFKPELYAAELSDATGVVSCVGAFGSNEQMEKICGDATVAATEAAEKAGVENFVFISAAGAQHEHALLAGYWKGKQKAEKAILERFPEGGVILRAPGIYGDRDVGSVTVPLGAWMRPMEMLFSLAPFSALRSASALEAVLTPPVAVENVARVAAAGALGLSPKAGVLLVDDINQI 887
PK+V+FGGNGFVG VC+ AL G VVSVNRSG P + W V WVQ D+F + +L A GV+SC+GAFGSN+ M+KICGD+ + A AGV FIS A+L GY++GK++AE+ + +FP+GGV LR IYG R+VG V +PLGA P++ + + P +L L A PPV+V VA+ A A S +AG+L D+ QI
Sbjct: 4 PKLVIFGGNGFVGSRVCEEALKTGLSVVSVNRSGPPK-QSADWVKGVEWVQADVFDVSSWRDQLKGAVGVISCLGAFGSNDFMQKICGDSNITVFNEAADAGVPRAAFISVHDYGFPGAVLPGYFQGKKRAEELLALKFPQGGVALRPGFIYGTRNVGGVGIPLGAIGYPLDKVLGVLPTKSLAGVPLLGAGFVPPVSVAAVAKAAVTAATDPSVEAGIL---DVWQI 227
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: A0A388KKI2_CHABU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KKI2_CHABU) HSP 1 Score: 184 bits (467), Expect = 3.100e-48 Identity = 101/230 (43.91%), Postives = 147/230 (63.91%), Query Frame = 3
Query: 207 KVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGAPAGRDKVWKDNVRWVQGDIFKPELYAAELSDATGVVSCVGAFGSNEQMEKICGDATVAATEAAEKAGVENFVFISAAGAQHEHALLAGYWKGKQKAEKAILERFPEGGVILRAPGIYGDRDVGSVTVPLGAWMRPMEMLFSLAPFSALRSASALEAVLTPPVAVENVARVAAAGALGLSPKAGVLLVDDINQIAKE 896
K+VVFGGNGFVG ++C+ AL G V SVNRSG PA R + W V WV+GD+F P+++ +L DA+GVVSC+G FG+N++M +I G A V A +AA + V+ FV ISA +L GY++GK+ AE+A+ +FP GG+ILR I+G+R+VG++TVPL P+E + F+ + + +VL PPV VA+ A A + G+L V IN++A++
Sbjct: 251 KLVVFGGNGFVGSHICREALSRGIHVTSVNRSGPPA-RQEPWLKEVEWVRGDVFDPDVWRMQLRDASGVVSCIGGFGTNDEMRRINGHANVKAVQAAAEEDVKRFVLISAHYFSVPAIILRGYYEGKRIAEEAVRSKFPYGGIILRPGFIHGNRNVGNLTVPLSVIGGPLEAVMRSRAFTWTSNLPIVGSVLLPPVKATAVAKAAVRAATDNAIPPGILDVWSINRLAEK 479
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: A0A8J9SCH8_9CHLO (Uncharacterized protein At1g32220, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SCH8_9CHLO) HSP 1 Score: 179 bits (454), Expect = 3.850e-48 Identity = 106/256 (41.41%), Postives = 149/256 (58.20%), Query Frame = 3
Query: 135 APRMFSIRALSQG-QGTSSQKDDI----PKVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGAPAGRDKVWKDNVRWVQGDIFKPELYAAELSDATGVVSCVGAFGSNEQMEKICGDATVAATEAAEKAGVENFVFISAAGAQHEHALLAGYWKGKQKAEKAILERFPEGGVILRAPGIYGDRDVGSVTVPLGAWMRPMEMLFSLAPFSALRSASALEAVLTPPVAVENVARVAAAGALGLSPKAGVLLVDDINQI 887
AP + S S +GT SQ+ + PK+V+FGGNGFVG VC+ A G VVSVNRSG P + W V WV+ D+F + +L+ A GV+SC+GAFGSN+ M+KICGD+ + A +AGV FIS A+L GY++GK++AE+A+ RFP+GGV LR IYG R+VG + +PLGA P++ + + P +L + A PPV+ VA+ A + +AG+L D+ QI
Sbjct: 56 APSLSSTTTASTAAEGTFSQQSEEFMGPPKLVIFGGNGFVGSRVCEEAFKTGLSVVSVNRSGPPK-QSADWIKGVEWVKADVFDVGSWRDQLNGAVGVISCLGAFGSNDFMQKICGDSNITVFNEAAQAGVPRAAFISVHDYGFPSAVLPGYFQGKKRAEEALALRFPQGGVALRPGFIYGTRNVGGLGIPLGAIGYPLDKVLGVLPTKSLAGIPLVGAGFVPPVSARAVAKAAVTATTDPAVEAGIL---DVWQI 307
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: A0A2P6U1X6_CHLSO (NAD dependent epimerase dehydratase family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U1X6_CHLSO) HSP 1 Score: 180 bits (456), Expect = 6.150e-48 Identity = 109/238 (45.80%), Postives = 139/238 (58.40%), Query Frame = 3
Query: 201 IPKVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGAPAGRDKVWKDNVRWVQGDIFKPEL-YAAELSDATGVVSCVGAFGSNEQMEKICGDATVAATEAAEKAGVENFVFISA------AGAQHEHALLAGYWKGKQKAEKAILERFPEGGVILRAPGIYGDRDVGSVTVPLGAWMRPMEMLFSLAPFSALRSASALEAVLTPPVAVENVARVAAAGALGLSPKAGVLLVDDINQIAK 893
+PK+VVFGGNGFVG VCQ L MG VVSVNRSG P W D V WVQGD P++ + L A GVVS +GAFGSNE M K+CG A + +A +AGV F FIS G + LL GY++GK+ AE+ + +R P GGV LR IYG R VGS + LG P+++ SL P +L + + A PPV+V+ VAR A + AL S GV+ D+ QI +
Sbjct: 116 LPKLVVFGGNGFVGSRVCQQGLAMGCGVVSVNRSGRPRNLRGDWLDQVEWVQGDALDPQVAWRDVLKGAAGVVSTLGAFGSNEHMYKVCGTANMRLVDAVVEAGVPRFAFISVHDYKFPGGWHAQDFLLRGYFQGKRDAERYMEDRLPSGGVALRPGFIYGTRAVGSANLHLGWVGAPLKVALSLLPTRSLANIPIIGAGFVPPVSVDAVARAAVSAALDPSVPPGVM---DVWQIGR 350
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: A0A7S0WUV3_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WUV3_9CHLO) HSP 1 Score: 176 bits (447), Expect = 1.710e-47 Identity = 120/280 (42.86%), Postives = 153/280 (54.64%), Query Frame = 3
Query: 66 SPTISSLTMLLVRRSTAAVPAKRAPRMFSIRALSQGQGTSSQKDDIPKVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGAPAGRD-KVWKDNVRWVQGDIFKPELYAAELSDATGVVSCVGAFGSNEQMEKICGDATVAATEAAEKAGVENFVFISAAGAQHEHALLAGYWKGKQKAEKAILERFPEGGVILRAPGIYGDRDVGSVTVPLGAWMRPMEM-LFSLAPFSALRSASALEAVLTPPVAVENVARVAAAGAL---GLSPKAGVLLVDDINQIA 890
S +SS+ LL R S K A + +R + +Q KVVVFGGNG+VG VC++ L MG V S+NRSG + W V WV+GD +PE + +L+ ATGVVSCVGAFGSN MEK+CGDATV+ EAA+ A V+NFVFISA Q +L+GY GK+KAE+A+ FP G LR I+G R V V V L P+E L + L S L ++ PP VE+VA VAA A G G + DI + A
Sbjct: 3 SRIVSSVRSLLPRASQVISSTKSAQEVAGVRGFAASASPGNQA----KVVVFGGNGYVGSYVCKSLLSMGVAVTSINRSGQITYPEWDHWWHKVNWVKGDALEPEEWKDKLAGATGVVSCVGAFGSNAYMEKVCGDATVSMVEAAKAAKVKNFVFISAHDYQLPSFVLSGYVAGKKKAEEAVASHFPTSGFSLRPGFIHGTRYVNGVPVFLSTIGGPLETALRGENAMNLLESQPKLATIMVPPTKVEDVASVAAQAAATGAGAGIPVGPISAWDIPKYA 278
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Match: A0A1Y1HXQ8_KLENI (NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXQ8_KLENI) HSP 1 Score: 176 bits (447), Expect = 1.170e-46 Identity = 94/230 (40.87%), Postives = 144/230 (62.61%), Query Frame = 3
Query: 207 KVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGAPAGRDKVWKDNVRWVQGDIFKPELYAAELSDATGVVSCVGAFGSNEQMEKICGDATVAATEAAEKAGVENFVFISAAGAQHEHALLAGYWKGKQKAEKAILERFPEGGVILRAPGIYGDRDVGSVTVPLGAWMRPMEMLFSLAPFSALRSASALEAVLTPPVAVENVARVAAAGALGLSPKAGVLLVDDINQIAKE 896
+++V GGNGFVG ++C+AA+ G V S+NRSG P + W +V W++G++F+P + L D GV+SCVGAFGS E M+++CGDA V A A + GV+ FVFISAA +L GY++GK++AE+AI E+ P GG+I R I+G+R VGS+T+PLG P+E +F + + + ++ PP+ VE +A+ A A G++ V I+++A+
Sbjct: 123 RLLVIGGNGFVGGHICKAAVEKGYKVSSLNRSGPPQHSES-WVKHVDWIRGNVFEPPSWRHSLKDVQGVISCVGAFGSYETMKRVCGDANVTAVNTAAEEGVKRFVFISAADMGLPTFVLRGYFEGKREAERAIREKLPYGGIIFRPSFIHGNRRVGSLTLPLGLVGSPLEAIFKSSAGKWVHGLPLVGPLIVPPINVETLAKAAVLAAKNNVVPPGIMDVWQISRLAER 351 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.17.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.17.2 >prot_P-littoralis_Contig75.17.2 ID=prot_P-littoralis_Contig75.17.2|Name=mRNA_P-littoralis_Contig75.17.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=271bp MLLVRRSTAAVPAKRAPRMFSIRALSQGQGTSSQKDDIPKVVVFGGNGFVback to top mRNA from alignment at P-littoralis_Contig75:52471..58071- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.17.2 ID=mRNA_P-littoralis_Contig75.17.2|Name=mRNA_P-littoralis_Contig75.17.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5601bp|location=Sequence derived from alignment at P-littoralis_Contig75:52471..58071- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:52471..58071- >mRNA_P-littoralis_Contig75.17.2 ID=mRNA_P-littoralis_Contig75.17.2|Name=mRNA_P-littoralis_Contig75.17.2|organism=Pylaiella littoralis U1_48|type=CDS|length=813bp|location=Sequence derived from alignment at P-littoralis_Contig75:52471..58071- (Pylaiella littoralis U1_48)back to top |