mRNA_P-littoralis_Contig747.11.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig747.11.2
Unique NamemRNA_P-littoralis_Contig747.11.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 6.550e-61
Identity = 138/365 (37.81%), Postives = 191/365 (52.33%), Query Frame = 1
Query:   25 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAF-------------------------LLERAAQAAKDGGTTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREEG 954
            KL+V+ F+R+ C DG P G  GA KV  + ++ I +W   E  L A  S     SK + +H   +A   ++E A+V+ IN  RK+         M KLL   P   GG+ ++ +PE+      +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E +                         + +   +   +   TP+Q EMP +TT+E TGAK A I TGG+ EK R+T+ LAV  DG+KV  RII+KG PF                           R+  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++G
Sbjct:   61 KLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDG 423          
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.510e-59
Identity = 142/365 (38.90%), Postives = 192/365 (52.60%), Query Frame = 1
Query:    7 AYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAF----------------------LLERAAQAAKDGGT---TPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFR 936
            +Y    KL+ + F+R+ C DG PVG  GA KV  +D++ I  W  +EA +    K K   SK +S+H G    T EVE  + D IN  R+         VM KLL   P   GG+ +    E+   F+ +F  WY+RF +RH  SIRR+TSVGQK P G+EG A+A + KLR++L E A E +                      L   A +  ++ G    TP+Q EMP +TT+EK GAK A I+TGG+ EK R+T+ LAV  DG KV  RII+KG PF                           +T+FGYP  G+S GVQ+ SW D  +   W+++ +  RP  GS  + QR S+LVLDDFR
Sbjct:   74 SYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFR 436          
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 3.160e-59
Identity = 135/352 (38.35%), Postives = 186/352 (52.84%), Query Frame = 1
Query:   64 DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAA-VTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAF----------------------LLERAAQAAKDGGTT---PIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREEG 954
            DG PVG  GA KV  + +K I +W   EA+L    S     SK + +H+G +  T + E      ++      A  +    VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL  +L + A E +                      L    A+  ++ G     P+Q EMP +TT++KTGAK A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF                           R   G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH +EG
Sbjct:  113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEG 464          
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 6.660e-57
Identity = 143/378 (37.83%), Postives = 192/378 (50.79%), Query Frame = 1
Query:   25 KLEVLKFSRLTCG-DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAF----------------------LLERAAQAAKDGGT---TPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------RTSFGYPA-----------GGISLGVQ--------------KSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREEG 954
            KL    ++R  C  DG PVG  GA  V  +  K I +W  QE +L    S     SK + +H+G +A T + E A+VD +N  RK         VM KLL   P   GGM +  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E +                      L    A+  ++ G    TP+Q EMP +TT+EKTGAK A I+TGGE EK R+T+VLAV  DG+KV PRII+KG PF               + S  +             GG    V               + SW D  + + W+   +  RP + S   QRP +LVLDDF+CH++EG
Sbjct:   88 KLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEG 464          
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.190e-54
Identity = 134/356 (37.64%), Postives = 185/356 (51.97%), Query Frame = 1
Query:   76 VGRRGAGKV-FGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAFLLERA----------------------AQAAKDGGT---TPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREEG 954
            VG +G+  +   + +K I +W  QE +L    S     SK + +H+G +A T + E A+VD IN  RK         VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR +L + A E +                           A+  ++ G    TP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV  DG+ V P II+KG PF                           R   G+PA G+S GVQ+ SW    + + W+   +        M RP + S   QRP +LVLDDF+CH++EG
Sbjct:   77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEG 431          
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 9.980e-53
Identity = 137/364 (37.64%), Postives = 182/364 (50.00%), Query Frame = 1
Query:   25 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAF----------------------LLERAAQAAKDGGT---TPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREE 951
            KL   +F+R+ C DG PVG  GA KV G+D++ +  W  +EA +    K K   SK +S+H G    T EVE  + D IN       A +   ++A                        F+ +F  WY+ F +RH FSIRR+TSVGQK P G+EG A+A + KLR++L E A E +                      L   AA+  ++ G    TP+Q EMP +TT+EK G K A I+TGG+ EK R+T  LAV  DG KV  RII+KG PF                           RT FGYP  G+   VQ+ SWCD  +   W+++ +  RP  GS  + QR S+LVLDDFRCHR E
Sbjct:    4 KLTAAEFTRVLCEDGQPVGNSGAAKVLGVDRRRVITWIGEEATMKKLVKEKPKLSKAKSIHVGMAPTTAEVEQDLEDCIN----EQLAASAGEILA------------------------FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSE 337          
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 1.800e-51
Identity = 114/270 (42.22%), Postives = 153/270 (56.67%), Query Frame = 1
Query:  304 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAF----------------------LLERAAQAAKDGGT---TPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREEG 954
            M KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E +                      L    A+  ++ G    TP+Q E+P +TT+EKTGAK A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF                           R   G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++EG
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEG 269          
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 4.960e-50
Identity = 132/356 (37.08%), Postives = 176/356 (49.44%), Query Frame = 1
Query:  124 IRDWESQEAELVAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAFL---------------------LERAA-QAAKDGGT---TPIQAEMPPDTTVEKTGAKSACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREEG 954
            +RD ES  A + A  K    SK + +H G +A T ++E A+V+ IN  RK+        VM KLL   P   GG+ ++ +PE+   F+ +F +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR +L E A E +                      LE    +  KD G    TP+Q EMP +TT+EKTGAK A I TG                            EK R+T+ LAV  DG KV  RII+KG PF                           R+  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++G
Sbjct:   31 VRDEESLRANVSANPK---LSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDG 382          
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 5.060e-50
Identity = 112/270 (41.48%), Postives = 149/270 (55.19%), Query Frame = 1
Query:  304 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAF----------------------LLERAAQAAKDGGT---TPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREEG 954
            M KLL   P   GGM +  +P +   F+ + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L   A E +                      L    A+  K+ G    TP+Q EMP +TT+EKTGAK A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF                           R    +PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++EG
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEG 269          
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Match: A0A6H5L819_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L819_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 2.010e-48
Identity = 119/320 (37.19%), Postives = 165/320 (51.56%), Query Frame = 1
Query:   73 PVGRRGAGKV----FGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAF----------------------LLERAAQAAKDGGT---TPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVT 861
            P+ R G+G+       + +K I +W  QE +L    S     SK + +H+G +A   + E A+VD IN   K         VM KLL   P   GG+P+  +PE+   F+ +FN+WY RF KR+ F IRR+TSVGQK P+G+EG AWA + KLR +L + A E +                      L    A+  ++ G    TP+Q E+P   T+EKTGAK A I+TGG+ EK R+T+VLAV  DG+KV PR I+KG PF                           R   GYPA G+S GVQ+ SW D  + + W++
Sbjct:   70 PIERSGSGRERELPHPVPRKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASIVDAEQALVDYINERHKQHRGCGNREVMNKLLELKPDALGGVPANAKPEEALAFKVKFNSWYQRFRKRNGFRIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAHDESPIKGEDLTSEQLASVEAEVFEEVGIMGQTPVQHEVPVAITLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRNIFKGTPFFPPTMSGKGKSTLPRKNSVAWEIHPANRAKHGYPANGMSFGVQEKSWSDQRECNGWIS 388          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig747.11.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8Y4_9PHAE6.550e-6137.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM5_9PHAE1.510e-5938.90DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE3.160e-5938.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ8_9PHAE6.660e-5737.83DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE1.190e-5437.64DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE9.980e-5337.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K6L9_9PHAE1.800e-5142.22DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE4.960e-5037.08DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE5.060e-5041.48DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L819_9PHAE2.010e-4837.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig747contigP-littoralis_Contig747:32095..33855 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1073
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue6.71e-28
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size666
COG categoryCH
BRITEko00000,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig747.11.2prot_P-littoralis_Contig747.11.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig747 32199..33552 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791542.235154-UTR-P-littoralis_Contig747:32094..321981680791542.235154-UTR-P-littoralis_Contig747:32094..32198Pylaiella littoralis U1_48UTRP-littoralis_Contig747 32095..32198 -
1680791542.29706-UTR-P-littoralis_Contig747:33552..338551680791542.29706-UTR-P-littoralis_Contig747:33552..33855Pylaiella littoralis U1_48UTRP-littoralis_Contig747 33553..33855 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791542.2463636-CDS-P-littoralis_Contig747:32198..323991680791542.2463636-CDS-P-littoralis_Contig747:32198..32399Pylaiella littoralis U1_48CDSP-littoralis_Contig747 32199..32399 -
1680791542.259857-CDS-P-littoralis_Contig747:32477..325641680791542.259857-CDS-P-littoralis_Contig747:32477..32564Pylaiella littoralis U1_48CDSP-littoralis_Contig747 32478..32564 -
1680791542.2730994-CDS-P-littoralis_Contig747:33084..331711680791542.2730994-CDS-P-littoralis_Contig747:33084..33171Pylaiella littoralis U1_48CDSP-littoralis_Contig747 33085..33171 -
1680791542.2839603-CDS-P-littoralis_Contig747:33261..335521680791542.2839603-CDS-P-littoralis_Contig747:33261..33552Pylaiella littoralis U1_48CDSP-littoralis_Contig747 33262..33552 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig747.11.2

>prot_P-littoralis_Contig747.11.2 ID=prot_P-littoralis_Contig747.11.2|Name=mRNA_P-littoralis_Contig747.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=222bp
MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKT
SVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAFLLERAAQAAKDGGTTPI
QAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIY
KGNPFRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSRDQ
RPSVLVLDDFRCHREEGSKRS*
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mRNA from alignment at P-littoralis_Contig747:32095..33855-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig747.11.2 ID=mRNA_P-littoralis_Contig747.11.2|Name=mRNA_P-littoralis_Contig747.11.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1761bp|location=Sequence derived from alignment at P-littoralis_Contig747:32095..33855- (Pylaiella littoralis U1_48)
CGGTGCGCATACGAGAACGCGCAGAAGCTCGAGGTGCTGAAGTTCAGCCG GCTAACGTGTGGTGATGGGCACCCAGTCGGAAGGCGTGGTGCGGGGAAGG TGTTCGGCATCGACAAGAAGCTGATCCGGGACTGGGAGAGCCAGGAGGCA GAGCTTGTGGCGTTTTCGAAGAAGGAGAACGCAAGCAAGCAGCGGTCGTT GCACACTGGACGCGAGGCTGACACGAAGGAGGTGGAGGTGGCCATAGTGG ACGAGATCAACACGCTCAGGAAAAACGGTGCTGCTGTGACCCGGGACCTC GTCATGGCCAAGCTTCTCTCCGAGATGCCAACCTTTTCAGGGGGCATGCC GTCCCAAGACGAGCCGGAGAAGATGGAAAAATTTCAGAAGCGTTTCAACG CCTGGTACTACAGGTTCCTCAAGAGGCACCGGTTCTCGATCCGACGCAAG ACGAGCGTGGGGCAGAAGAAGCCGGAAGGATGGGAGGGCAAGGCGTGGGC ATTCATCCAGAAGCTTCGCTCAAGCCTGCGTGAGCACGCGCAGGAAGCCT TTCTCTTGGAGAGGGCAGCCCAGGCAGCGAAGGACGGAGGGACCGTTGAG ATCGAGATGGACGTCATCGCAACTGCGGAGGAACTTCTGGCTGTTCAGGG CAAGATCTTCGCCCTTCTGTACAACATGGACCAGACCCCGATCCAGGCTG AGATGCCGCCGGACACCACGGTGGAGAAGACTGGTGCGAAGAGCGCTTGC ATCACGACAGGAGGTGAGACGGTGTACTAAAGGTATTTCGATTGTTGAAA TTCAGTTCAAACCAACATGGTGGAGATTTTCTGACGATGGAACAAGCGGG GAATTACAAATTTGCCGACGGCGGAAAAACGGGGAATTATAATATTTTGC ATTGCTTCTGCCGTCACGTGCACGCTTTCGTTCTTCTATTGCCTGCAAGT ACGGTACGTACTGCTGTATCGCCTGTCCCTTCGAACTACCGGTACACAGC GATGAAATTATTCATATGGTATTCCGCTGAAGTATTTTTTTTAATATACA CATGTTTTGGGGGGCAATATATATTTTACCGTATACACCGGAGTTTGTTT TTATTTTACTTTTTATGTTGTGGTAGGCATTACACCCCAGGAGTTAAAGG TGTGTGTTTGTTTTTTATTATTATTTATTTTTTGTTTGTTGTGGCAGGCA ATACGATTAATAATTGTTCTGCTTTGCGGAGTATTTTCTTTTAACACAAT TTCCTTTGTTTGCATACGCCCCAATTTTCGCACCAGGCAAGGAGAAGCTG CGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGAAGGTGCGGCC GCGCATCATCTACAAGGGGAACCCTTTTGTCGGGGGTACCAACAAGTCAG GCTCAGCCAAGAAGCCTGGCAAGAACAGCCTGTCGTACGAGCACCTCCCA GACAAGCGGACGAGCTTCGGCTACCCGGCTGGCGGCATCAGCCTCGGGGT GCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGTGGGTAACCC AGGACTTCATGCGCCGCCCAGGGTCTACCTCCAGAGATCAGCGTCCCAGC GTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGGGTTCCAAAAG AAGCTAATGGACCTGGCCAAGACGCTGGTGGTGATGCTTGGTGGAGGGCT GACCCCGGTGTGCCAGCCGCTCGACCGGAACATCAACAAGGAGTTCAAGC GAGGTGTTCGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig747:32095..33855-

>mRNA_P-littoralis_Contig747.11.2 ID=mRNA_P-littoralis_Contig747.11.2|Name=mRNA_P-littoralis_Contig747.11.2|organism=Pylaiella littoralis U1_48|type=CDS|length=666bp|location=Sequence derived from alignment at P-littoralis_Contig747:32095..33855- (Pylaiella littoralis U1_48)
ATGGCCAAGCTTCTCTCCGAGATGCCAACCTTTTCAGGGGGCATGCCGTC
CCAAGACGAGCCGGAGAAGATGGAAAAATTTCAGAAGCGTTTCAACGCCT
GGTACTACAGGTTCCTCAAGAGGCACCGGTTCTCGATCCGACGCAAGACG
AGCGTGGGGCAGAAGAAGCCGGAAGGATGGGAGGGCAAGGCGTGGGCATT
CATCCAGAAGCTTCGCTCAAGCCTGCGTGAGCACGCGCAGGAAGCCTTTC
TCTTGGAGAGGGCAGCCCAGGCAGCGAAGGACGGAGGGACCACCCCGATC
CAGGCTGAGATGCCGCCGGACACCACGGTGGAGAAGACTGGTGCGAAGAG
CGCTTGCATCACGACAGGAGGTGAGACGGAGAAGCTGCGGTACACCGTGG
TGCTAGCTGTCCGGGGTGATGGACAGAAGGTGCGGCCGCGCATCATCTAC
AAGGGGAACCCTTTTCGGACGAGCTTCGGCTACCCGGCTGGCGGCATCAG
CCTCGGGGTGCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGT
GGGTAACCCAGGACTTCATGCGCCGCCCAGGGTCTACCTCCAGAGATCAG
CGTCCCAGCGTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGGG
TTCCAAAAGAAGCTAA
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