mRNA_P-littoralis_Contig745.20.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: A0A6H5JMM1_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM1_9PHAE) HSP 1 Score: 389 bits (998), Expect = 1.830e-125 Identity = 204/265 (76.98%), Postives = 227/265 (85.66%), Query Frame = 1
Query: 1 GGEMLLRVRQLTWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALEWGALREMAETFTGERMTKTALLVVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLYKLIPKGP 795
GG+ V++++W QWA+KV PVAAASG EVGTS LGL+ M VG HTM+RSTVPIFVLLFSVGMGLQEFR GLLAVV+LVSGGVTLL SGQ SD +NFP+DG LLTLLSG+LAGLKWTL+QVLLQGRGLYGKG +T GEHI PFTLLHYMSLSSA SL+PF L LE G+L EMA TF+G RM KT L++VA SLLA +LVL EFSFI+RVSSLSLCII VVKELLLV FSV VLGEHL GRTGLGFFVT VGV+LYKL+PKGP
Sbjct: 131 GGDASHLVQRVSWHQWAWKVFPVAAASGLEVGTSALGLKVMHVGVHTMVRSTVPIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRSD-QEENFPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGKGAITVGEHIHPFTLLHYMSLSSAASLVPFALTLELGSLHEMAVTFSGHRMVKTGLMIVAVSLLAFMLVLAEFSFIRRVSSLSLCIIAVVKELLLVMFSVLVLGEHLSGRTGLGFFVTMVGVTLYKLVPKGP 394
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI) HSP 1 Score: 387 bits (993), Expect = 4.760e-122 Identity = 203/265 (76.60%), Postives = 227/265 (85.66%), Query Frame = 1
Query: 1 GGEMLLRVRQLTWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALEWGALREMAETFTGERMTKTALLVVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLYKLIPKGP 795
GG+ V++L+W QWA+KV PVAAASG EVGTS LGL+ M VG HTM+RSTVPIFVLLFSVGMGLQEFR GLLAVV+LVSGGVTLL SGQ +D D FP+DG LLTLLSG+LAGLKWTL+QVLLQGRGLYG+G +T GEHI PFTLLHYMSLSSA SL+PF LALE GAL EMA TF+G R+ KT L++VA SLLA +LVL EFSFI+RVSSLSLCII VVKELLLV FSV VLGEHL GRTGLGFFVT +GV+LYKL+PKGP
Sbjct: 339 GGDASHLVQRLSWHQWAWKVFPVAAASGLEVGTSALGLKVMHVGVHTMVRSTVPIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRNDQEED-FPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAITVGEHIHPFTLLHYMSLSSAASLVPFALALELGALHEMAVTFSGHRIVKTGLMIVAVSLLAFMLVLAEFSFIRRVSSLSLCIIAVVKELLLVMFSVLVLGEHLSGRTGLGFFVTMIGVTLYKLVPKGP 602
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: A0A059LHG3_9CHLO (TPT domain-containing protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LHG3_9CHLO) HSP 1 Score: 129 bits (324), Expect = 3.950e-28 Identity = 83/252 (32.94%), Postives = 133/252 (52.78%), Query Frame = 1
Query: 19 RVRQLTWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALEWGALREMAETFTGERMTKTALLVVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLY 774
R QL+W+ W + VLP A+G ++G S L + + + M +S P+F+LL + MGL+ W + V+L++ G+ LLV G+ NF G L +L+ +LAGL+WT+ Q+LLQG + +G +AG ++ L + + +AL+L+ V+ WG L + + + T +V +L+A V+V TEF+ I S+L+ + G KE+ V +V L E G V GVSLY
Sbjct: 176 REEQLSWRAWCWTVLPNGLATGLDIGLSNYSLVFISLSFYVMCKSATPLFLLLCAFAMGLERPTWEVGGVMLVICAGLALLVEGEF------NFHAGGFSLVMLASLLAGLRWTITQILLQG---HARGRGSAGGSVEVIVELTPI-MCAALALLSVVVERPWGVLAQSTYFSSAWHVFVTFAVVSLGALIAFVMVWTEFALIASTSALTFMVAGTFKEVFTVGAAVLSLHEPFSAVNAAGLVVLLAGVSLY 417
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: A0A2T7NJN8_POMCA (TPT domain-containing protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NJN8_POMCA) HSP 1 Score: 126 bits (316), Expect = 8.810e-28 Identity = 80/252 (31.75%), Postives = 136/252 (53.97%), Query Frame = 1
Query: 31 LTWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALEWGALREM-AETFTGERMTKTALLVVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLYKLI 783
LTWK++ +V P S ++G S + + +TM +S+ IF+L FS+ L++ R L+ VVL ++GG+ + H F ++G L+ L + VL+GL+WTLAQ++LQ L PL HI P+ +L + LS+A ++ ++ + T + TK AL V A ++LA L +EF + SSL+ + G+VKEL ++ ++ V GE++ G+G V +G+SL+ ++
Sbjct: 106 LTWKEYLKRVAPTGFISALDIGLSNWSFDFITISLYTMTKSSAVIFILAFSLLFRLEKCRSSLVIVVLFIAGGLFMFTY------HSTEFNLEGFLMVLAASVLSGLRWTLAQMILQKHELGLHHPLDMMYHIQPWMILTLLPLSAATE------GIKMSSMEALFRSTDINDLATKLAL-VFAGAMLAFGLEFSEFLLVSNTSSLTFSVSGIVKELCILYLAINVKGENINVINGIGLVVCLIGISLHVIL 344
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: E1ZD43_CHLVA (TPT domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZD43_CHLVA) HSP 1 Score: 127 bits (318), Expect = 2.000e-27 Identity = 82/265 (30.94%), Postives = 141/265 (53.21%), Query Frame = 1
Query: 34 TWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALE--WGALREMAETFTGERMTKTALLVVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLYKLIPKGPRKARYEAAA 822
+W+ +A KV+P A+G ++G S L + + + M +ST P+F+L+F++ G+++ W L AVV +++ G+ LLV G+T F + G LL + + +LAGL+WT+ QVLLQG G A +H P +L+ ++ +L+L+ L E W L T + L++ +++A +V+ EF+ I S+L+ + G KE++ V+ +V LGE +G V GV L+ + +K + E AA
Sbjct: 133 SWRDYARKVVPNGVATGLDIGFSNYSLVYITLSFYVMCKSTTPLFLLVFAIAWGIEKPSWSLAAVVSVITAGLLLLVYGETK------FHLVGFLLVMSAAMLAGLRWTITQVLLQGTPESGGAAHGAKKHGGPVEVLYQLTPVMSLTLLLLSLGHEKLWERLPASPYFATVGMGLLSCLIIFGGAIIAFAMVVAEFALIANTSALTFMVAGTFKEIVTVAAAVMFLGEQFTWINAMGLLVLIAGVVLFNYLKF--KKLKEELAA 389
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: A0A7R9V231_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V231_9CHLO) HSP 1 Score: 123 bits (308), Expect = 1.110e-26 Identity = 79/255 (30.98%), Postives = 137/255 (53.73%), Query Frame = 1
Query: 28 QLTWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALEWG----ALREMAETFTGERMTKTALLVVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLYKL 780
+L+W +WA K+LP A+G ++G S + L + + +TM +ST+P+F++ F++ GL+ W L+ VV ++ G+ LLV+G+ +F ++G L+ + + L+G + TL Q+ LQG G G ++ +L+ +S+ V++L W L E A T E + + L++ ++LA LV TE+ I+ S ++ I+G +KELL V +V L + LGF V GV L+K+
Sbjct: 95 ELSWMEWAKKILPNGMATGMDIGLSNMSLVFITLSFYTMCKSTMPLFLVAFAIAFGLETPSWRLIMVVTVIVVGLVLLVAGEV------DFDVEGFLMVMTAACLSGFRITLTQLFLQGTS----GTAALGGPLEVLC-----ALTPVMSVTTLVVSLVWEKLWVVLPESAFFNTPEHLVLSTGLIMVGAVLAFCLVWTEYKLIRETSGITFMIMGTLKELLTVGAAVFFLEDSFVWINALGFVVVIAGVVLFKV 334
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: A0A1R1X194_9FUNG (Putative sugar phosphate/phosphate translocator n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X194_9FUNG) HSP 1 Score: 119 bits (299), Expect = 7.610e-26 Identity = 72/248 (29.03%), Postives = 137/248 (55.24%), Query Frame = 1
Query: 40 KQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALEWGALREMAETFTGERMTKTALLVVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLYKLI 783
K + KVLP + AS ++G S L L+ + + +TM +S+V IFVL F+ GL+ R+ L+ VVL++S GV L+VSG+ +F + G + + + ++G++W++ QVL++ L P+ ++ P M + A+ + F + +TF+ T LL+ LLA +++L+EF I + S L+L ++G++KE+++++ +V + G+ + +G +T G++LY +
Sbjct: 13 KSYFTKVLPCSLASALDIGLSNLSLKTITLTFYTMCKSSVIIFVLFFAFAFGLERVRFSLILVVLIISFGVLLMVSGEV------DFVLVGFIQVIAASAMSGVRWSMTQVLIEKAKLGMNNPILTLSYLTPI-----MGIFLAILSLIFESPITELPKTHFFQTFSDSMYT--ILLIGVGGLLATMMILSEFFLISQTSVLTLAVVGILKEVVMITVAVIIFGDKITFTNSIGLVITIFGIALYNYL 247
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: A0A2P6V897_9CHLO (Putative sugar phosphate phosphate translocator n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V897_9CHLO) HSP 1 Score: 121 bits (303), Expect = 1.470e-25 Identity = 76/252 (30.16%), Postives = 133/252 (52.78%), Query Frame = 1
Query: 34 TWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALE--WGALREMAETFTGERMTKTALLVVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLYKLI 783
+W+ + KV+P A+G ++G S L + + + M +ST P+F+L+F++ G++ W L AVV ++S G+ LLV G+T F + G +L + + +LAGL+WT+ QVLLQG G G + +H P +L+ ++ L+L+ L E W L T + ++ + +A ++V+ EF+ I S+L+ + G KE++ V+ +V LGE+ +G V GV L+ +
Sbjct: 124 SWQDYFRKVVPNGVATGLDIGFSNYSLVFITLSFYVMCKSTTPLFLLVFAIAWGIETPSWSLAAVVSVISAGLLLLVYGETQ------FHLVGFILVMTAAMLAGLRWTITQVLLQGGPGGGHG---SKKHGGPVEVLYQLTPVMGLTLLLLSLGHERLWATLPASPYFATVGMTCVSVAIIFGGAFIAFMMVVAEFALIANTSALTFMVAGTFKEIVTVAAAVAFLGENFTWINAMGLLVLIAGVVLFNWL 366
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: A0A8K0P0M0_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0P0M0_LADFU) HSP 1 Score: 117 bits (294), Expect = 7.180e-25 Identity = 72/251 (28.69%), Postives = 136/251 (54.18%), Query Frame = 1
Query: 31 LTWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALEWGALREMAETFTGERMTKTALLVVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLYKLI 783
+ WK + KV P ASG ++G S GL+ + V +TM +ST IF++ F++ + L+E W + +VL++SGG+ L T+ F + G +L LL+ ++GL+WTLAQ+++Q L P+ H+ P+ ++ + ++ A+ F+++ + + FT T +V +++A ++ + E+ + SSL+L + G+ KEL+ V +V G++L +GF + G+ +Y +I
Sbjct: 85 IDWKNYMLKVAPTGLASGLDIGISNWGLELVTVSLYTMTKSTAIIFIMGFAILLKLEEKSWKAIVIVLMISGGLILFTFEATA------FDVLGFILVLLASCISGLRWTLAQLVMQKSKLGLHNPVDMVYHVQPWMIVSVLPIAIAIEGKSFIVSNKVFCFDDWDVLFT------TIWMVAIGTVMAFLMEVAEYMVVSFTSSLTLSVAGIFKELMTVMLAVNFNGDNLSVINYVGFLLCLGGI-IYHVI 322
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Match: A0A8B7N522_HYAAZ (solute carrier family 35 member C2-like n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7N522_HYAAZ) HSP 1 Score: 117 bits (293), Expect = 7.980e-25 Identity = 81/278 (29.14%), Postives = 140/278 (50.36%), Query Frame = 1
Query: 31 LTWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVPIFVLLFSVGMGLQEFRWGLLAVVLLVSGGVTLLVSGQTSDGHHDNFPIDGLLLTLLSGVLAGLKWTLAQVLLQGRGLYGKGPLTAGEHIDPFTLLHYMSLSSALSLIPFVLALEWGALREMAETFTGERMTKTALL---VVAASLLALVLVLTEFSFIKRVSSLSLCIIGVVKELLLVSFSVGVLGEHLGGRTGLGFFVTAVGVSLYKLIPKGPRKARYEAAADNEPLEGEGEG 855
L W+ + KVLP AA+G ++G S L+ + V +TM +ST +F+L F++ L+E RW ++ +V+L++GG+ + T F + G L + + +L+GL+WTL+Q+L+Q L P+ H+ P+ ALSL+P A+E L F + + AL+ V+ + +A + ++E+ + SSL+ I GV KE+ ++ +V EHL G + +G++L+ R+ R E A+ P G G
Sbjct: 96 LNWRIYCTKVLPAGAAAGLDIGLSQWSLEFITVTLYTMSKSTALLFILFFAILFKLEEMRWSIVVLVILIAGGLLMFTYKYTQ------FNLFGFTLVMTASLLSGLRWTLSQILMQKSELGLSHPVDLVYHVQPWM---------ALSLLPLAAAMEGTGLAGSEVGFNFKDIEMAALMWCRVLLGAFIAFCMEISEYYVVSCTSSLTFSISGVAKEIATLTLAVYYYHEHLSLINKAGLLLCVLGIALHVFFKA--RQLRLETASLKGPTSPPGTG 356 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig745.20.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig745.20.6 >prot_P-littoralis_Contig745.20.6 ID=prot_P-littoralis_Contig745.20.6|Name=mRNA_P-littoralis_Contig745.20.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=409bp MLLRVRQLTWKQWAFKVLPVAAASGFEVGTSTLGLQNMPVGAHTMIRSTVback to top mRNA from alignment at P-littoralis_Contig745:126069..135002+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig745.20.6 ID=mRNA_P-littoralis_Contig745.20.6|Name=mRNA_P-littoralis_Contig745.20.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=8934bp|location=Sequence derived from alignment at P-littoralis_Contig745:126069..135002+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig745:126069..135002+ >mRNA_P-littoralis_Contig745.20.6 ID=mRNA_P-littoralis_Contig745.20.6|Name=mRNA_P-littoralis_Contig745.20.6|organism=Pylaiella littoralis U1_48|type=CDS|length=1227bp|location=Sequence derived from alignment at P-littoralis_Contig745:126069..135002+ (Pylaiella littoralis U1_48)back to top |