mRNA_P-littoralis_Contig743.18.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5KRV8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV8_9PHAE) HSP 1 Score: 204 bits (519), Expect = 1.100e-58 Identity = 99/124 (79.84%), Postives = 111/124 (89.52%), Query Frame = 1
Query: 1 KHKTFGQWVDLIVADGMAYLAVCIAIRTGDFVLREAALRRIAPLFLGYNKHLYHALCIRHLADVAMLSPAERLFMSETFSLSLSSVPGKNTALDEIQEMTMNKDFQAAATGTALRYLQRLGLTL 372
KHKTFGQW D +++DGMAYLAV I I+TGDF LREAA+R+IAPLFLGYNK+LYHALCIRHLAD+A LSPAERLF+SETFSLSLS PGKNT LDEIQEMTMNKD + AATGT +RYL+RL LTL
Sbjct: 435 KHKTFGQWADFLLSDGMAYLAVYIGIQTGDFDLREAAIRKIAPLFLGYNKNLYHALCIRHLADIARLSPAERLFISETFSLSLSGKPGKNTGLDEIQEMTMNKDVKQAATGTDVRYLERLTLTL 558
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5L7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q2_9PHAE) HSP 1 Score: 201 bits (510), Expect = 4.570e-58 Identity = 98/124 (79.03%), Postives = 109/124 (87.90%), Query Frame = 1
Query: 1 KHKTFGQWVDLIVADGMAYLAVCIAIRTGDFVLREAALRRIAPLFLGYNKHLYHALCIRHLADVAMLSPAERLFMSETFSLSLSSVPGKNTALDEIQEMTMNKDFQAAATGTALRYLQRLGLTL 372
KHKTFGQW D +++DGMAYLAV I IRTGDF LREAA+R+IAPLFLGYNK+L HALCI+HLAD+A LSPAERLF+SETFSLS S PGKNT LDEIQEMTMNKD + AATGT +RYLQRL LTL
Sbjct: 271 KHKTFGQWADFLLSDGMAYLAVYIGIRTGDFDLREAAIRKIAPLFLGYNKNLCHALCIQHLADIARLSPAERLFISETFSLSRSGKPGKNTGLDEIQEMTMNKDIKQAATGTDVRYLQRLNLTL 394
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5KQE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE5_9PHAE) HSP 1 Score: 198 bits (504), Expect = 1.610e-56 Identity = 94/124 (75.81%), Postives = 108/124 (87.10%), Query Frame = 1
Query: 1 KHKTFGQWVDLIVADGMAYLAVCIAIRTGDFVLREAALRRIAPLFLGYNKHLYHALCIRHLADVAMLSPAERLFMSETFSLSLSSVPGKNTALDEIQEMTMNKDFQAAATGTALRYLQRLGLTL 372
KHKTFGQWV++++ DGMAYLA+ I IR GDF LREAALRRIAPLFLGYNK+ YH LCI+HLAD+ +SPAER FMSETFSLSLS PGKNT LDEIQEMTMNK+++ AATGT + YLQ+LGLTL
Sbjct: 429 KHKTFGQWVEMLLVDGMAYLALYIGIRIGDFDLREAALRRIAPLFLGYNKYKYHDLCIKHLADICRMSPAERSFMSETFSLSLSGTPGKNTGLDEIQEMTMNKEYKGAATGTEIGYLQKLGLTL 552
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5L2D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D3_9PHAE) HSP 1 Score: 187 bits (475), Expect = 5.080e-54 Identity = 91/124 (73.39%), Postives = 106/124 (85.48%), Query Frame = 1
Query: 1 KHKTFGQWVDLIVADGMAYLAVCIAIRTGDFVLREAALRRIAPLFLGYNKHLYHALCIRHLADVAMLSPAERLFMSETFSLSLSSVPGKNTALDEIQEMTMNKDFQAAATGTALRYLQRLGLTL 372
KHKT GQWV++++ DGMAYLA+ I GDF LREAALR+IAPLFLGYNK+ YH CI+HLAD+ +SP ER FMS+TFSLSLS VPGKNT+LDEIQEMTMNKDF+ AATGT +RYLQ+LGLTL
Sbjct: 429 KHKTCGQWVEMLLVDGMAYLALYI----GDFDLREAALRKIAPLFLGYNKYKYHDSCIKHLADICRMSPTERSFMSKTFSLSLSGVPGKNTSLDEIQEMTMNKDFKGAATGTDIRYLQKLGLTL 548
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5JPG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPG5_9PHAE) HSP 1 Score: 179 bits (455), Expect = 9.280e-54 Identity = 89/124 (71.77%), Postives = 104/124 (83.87%), Query Frame = 1
Query: 1 KHKTFGQWVDLIVADGMAYLAVCIAIRTGDFVLREAALRRIAPLFLGYNKHLYHALCIRHLADVAMLSPAERLFMSETFSLSLSSVPGKNTALDEIQEMTMNKDFQAAATGTALRYLQRLGLTL 372
KHKTFGQW DL+++DGMAYLAV I IRT DF LREAA+R+IAPLFLGYNK+LYHALCI++LAD+A LSPAERLF+SETFSLSLS N+ L EIQ+M M KD + A TGT +R+LQRL LTL
Sbjct: 144 KHKTFGQWADLLLSDGMAYLAVYIGIRTEDFDLREAAIRKIAPLFLGYNKNLYHALCIQYLADIARLSPAERLFISETFSLSLSEKLSNNSGLGEIQKMIMTKDIKQAPTGTDVRHLQRLTLTL 267
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5KGL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL9_9PHAE) HSP 1 Score: 176 bits (447), Expect = 4.510e-49 Identity = 87/124 (70.16%), Postives = 102/124 (82.26%), Query Frame = 1
Query: 1 KHKTFGQWVDLIVADGMAYLAVCIAIRTGDFVLREAALRRIAPLFLGYNKHLYHALCIRHLADVAMLSPAERLFMSETFSLSLSSVPGKNTALDEIQEMTMNKDFQAAATGTALRYLQRLGLTL 372
KHKTFGQW +L++ DGMAYLAV I+IR GDF LREAA+R+IAPLFL YNK+LYHAL I+HLAD+A L P+ER F+ FSLSL+ PGKN LDEIQEMTMNK+ + AA GT +RYLQRL LTL
Sbjct: 614 KHKTFGQWAELLLDDGMAYLAVYISIRVGDFDLREAAIRQIAPLFLDYNKNLYHALTIQHLADIANLRPSEREFLRGMFSLSLAGNPGKNVGLDEIQEMTMNKEIKQAAHGTDVRYLQRLALTL 737
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5JBA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA3_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 1.320e-19 Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 1
Query: 199 LSPAERLFMSETFSLSLSSVPGKNTALDEIQEMTMNKDFQAAATGTALRYLQRLGLTL 372
+SPAER FMSETFSLSLS PGKNT LDEIQEMTMNK+++ AATGT + YLQ+LGLTL
Sbjct: 1 MSPAERSFMSETFSLSLSGTPGKNTGLDEIQEMTMNKEYKGAATGTEIGYLQKLGLTL 58
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5KVM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 3.590e-16 Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 1 KHKTFGQWVDLIVADGMAYLAVCIAIRTGDFVLREAALRRIAPLFLGYNKHLYHALCIRHLADVAMLSPAERLFMSETFSLSLSSVPGKNTALDEIQEM 297
+HKTF W ++ D AYL A+RTGDF+LR ALRRIAP+F + Y L + HLA+++ +S ++ MSE FS+SLS LDE QE+
Sbjct: 39 EHKTFALWEQFLLHDFPAYLTFRTALRTGDFMLRLDALRRIAPIFYISGEDRYQFLVVDHLAEMSRMSESDLKVMSELFSVSLSKDACVRLGLDERQEV 137
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5JDT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT2_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.930e-15 Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 1 KHKTFGQWVDLIVADGMAYLAVCIAIRTGDFVLREAALRRIAPLFLGYNKHLYHALCIRHLADVAMLSPAERLFMSETFSLSLSSVPGKNTALDEIQEM 297
KHKTF W ++ D AY+ A+RTGDF+LR ALRRIAP+F K Y L + HLA+++ +S ++ ++E FS+SLS LDE QE+
Sbjct: 323 KHKTFALWEQFLLHDFPAYVTFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVDHLAEMSTMSESDLKVIAELFSVSLSKDACARLGLDERQEV 421
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Match: A0A6H5JCT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT7_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 3.550e-15 Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 175 RHLADVAMLSPAERLFMSETFSLSLSSVPGKNTALDEIQEMTMNKDFQAAATGTALRYLQRLGLTL 372
+H ++ AE F ETFSLSL+ +PGKNT LDEIQEMTMNK+F+ AATGT + YLQRL LTL
Sbjct: 433 KHKTHGQWMNDAEVEFTRETFSLSLAGIPGKNTGLDEIQEMTMNKEFKQAATGTDIAYLQRLCLTL 498 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig743.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig743.18.1 >prot_P-littoralis_Contig743.18.1 ID=prot_P-littoralis_Contig743.18.1|Name=mRNA_P-littoralis_Contig743.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=124bp KHKTFGQWVDLIVADGMAYLAVCIAIRTGDFVLREAALRRIAPLFLGYNKback to top mRNA from alignment at P-littoralis_Contig743:33811..34182- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig743.18.1 ID=mRNA_P-littoralis_Contig743.18.1|Name=mRNA_P-littoralis_Contig743.18.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=372bp|location=Sequence derived from alignment at P-littoralis_Contig743:33811..34182- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig743:33811..34182- >mRNA_P-littoralis_Contig743.18.1 ID=mRNA_P-littoralis_Contig743.18.1|Name=mRNA_P-littoralis_Contig743.18.1|organism=Pylaiella littoralis U1_48|type=CDS|length=372bp|location=Sequence derived from alignment at P-littoralis_Contig743:33811..34182- (Pylaiella littoralis U1_48)back to top |