mRNA_P-littoralis_Contig742.31.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 332 bits (852), Expect = 6.160e-109 Identity = 164/224 (73.21%), Postives = 190/224 (84.82%), Query Frame = 2
Query: 293 MVKFTAGLALLAASALSLSNAAEYRVRVRNLTYQQPFSPPLVVAHTSDVALFQEGLVANDAIKLMAEDGDNSALLALAASDEVSPYICGAVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLR---TTKVYPPAFDAGTEVNNELCSHMPGPACAADSGNMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISKQ 955
MVKFTAG AL AS LSL++A +++VRVRNLTY QPFSP LVVAHT+DVALF+EGL A+DAIKLMAEDGDNSALL LAASD+V+PYICGAV +GP+FPGETWRGT+ +DE+ CPD V+S VSMLINTNDAF+GIDSD L ++KV+PPAFDAGTE NNELC+H+PGPAC ADSGNM D PGE FIHVHRGFHG+ +L E YDWRNPVAEVFI++Q
Sbjct: 1 MVKFTAGFAL--ASVLSLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGP----DLGEANYDWRNPVAEVFIARQ 218
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 300 bits (767), Expect = 4.610e-96 Identity = 150/229 (65.50%), Postives = 180/229 (78.60%), Query Frame = 2
Query: 293 MVKFTAGLALLAASALSLSNAA-------EYRVRVRNLTYQQPFSPPLVVAHTSDVALFQEGLVANDAIKLMAEDGDNSALLALAASDEVSPYICGAVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLR--TTKVYPPAFDAGTEVNNELCSHMPGPACAADSGNMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 952
MV FTA A+ AS +SL+NA+ ++VRVRNLTY QPFSPPL+VAHT DVALF+EG ANDAIKLMAEDGDNSALL L+ S +V+PYICG VV++GP+FPGETWRG + VD ICP+ V+S V+MLINTNDAF+GIDSDTL +TK +PPAFDAGTEVN+E CS++PGP C A SGN + PGEG+IHVHRG HG+ G+L E YDWRNPVAE++I K
Sbjct: 1 MVNFTAAFAM--ASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLELGSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGV-----GDLEEASYDWRNPVAEIYIQK 222
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 291 bits (745), Expect = 4.700e-93 Identity = 139/203 (68.47%), Postives = 165/203 (81.28%), Query Frame = 2
Query: 344 LSNAAEYRVRVRNLTYQQPFSPPLVVAHTSDVALFQEGLVANDAIKLMAEDGDNSALLALAASDEVSPYICGAVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTL-RTTKVYPPAFDAGTEVNNELCSHMPGPACAADSGNMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFIS 949
++NA E VRVRNLTY QPFSP VVAHT+DV++F+EG A+DA+K+MAEDGDNSAL+ L AS++V PYICG V+ + PLFPG+TWRG M VDE+ICPDA +S VSMLINTNDAF+GIDS+ L T KV+PPAFDAGTE NNELC+H+PGPAC ADSGNM D PGEGFI V RGFHG+ +L E YDWRNPVAEV ++
Sbjct: 1 MANAGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGP----DLGEANYDWRNPVAEVVVA 199
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 184 bits (467), Expect = 1.050e-51 Identity = 98/203 (48.28%), Postives = 127/203 (62.56%), Query Frame = 2
Query: 362 YRVRVRNLTYQQPFSPPLVVAHTSDVALFQEGLVANDAIKLMAEDGDNSALLALAASDEVSPYICGAVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTL---RTTKVYPPAFDAGTEVNNELCSHMPGPACAADSG---NMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 952
Y+VRV NLT++Q FSPP++VAH LF +G A AIK MAE+G N + +A ++ CG ++GPL PG+TW G + D C V+S V+ L NTNDAFMGID R +K++PPAFDAGTE NNE C+ + G AC A N+ EGFIHVHRG +G+ G+LS+ YDW+NPVAEV +SK
Sbjct: 4 YKVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNRFIEIIATRED---GFCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGV-----GDLSQADYDWKNPVAEVVVSK 198
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.060e-51 Identity = 100/201 (49.75%), Postives = 127/201 (63.18%), Query Frame = 2
Query: 365 RVRVRNLTYQQPFSPPLVVAHTSDVALFQEGLVANDAIKLMAEDGDNSALLALAASDEVSPYICGAVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTL---RTTKVYPPAFDAGTEVNNELCSHMPGPACAAD--SGNMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 952
+VRV NLT++Q FSPP++VAH LF G A AIKLMAEDG+N ++A+A + CG ++GPL PG+TW G + D C + V+S V+ L NTNDAFMGID +K++PPAFDAGTE NNE C+ MPG AC A S EGFIHVHRG +G+ G+LS+ Y W+NPVAEV +SK
Sbjct: 76 KVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGV-----GDLSKADYGWKNPVAEVVVSK 268
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 177 bits (450), Expect = 4.520e-49 Identity = 102/219 (46.58%), Postives = 130/219 (59.36%), Query Frame = 2
Query: 314 LALLAASALSLSNAAEYRVRVRNLTYQQPFSPPLVVAHTSDVA-LFQEGLVANDAIKLMAEDGDNSALLALAASDEVSPYICGAVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLRT---TKVYPPAFDAGTEVNNELCSHMPGPACAADSGNMMD--APGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 952
L+L + + S S+ Y+VRV NLT++Q FSPP++VAH LF G A AIK MAE+G N + +A + CG V++GPL PG+TW G + D C + V+S V+ L NTNDAFMGID +K +PPAFDAGTE NNE C+ MPG AC A + EGFIHVHRG G+ G+LS+ Y W NPVAEV +SK
Sbjct: 2 LSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNGMVKVIATRES---GFCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGV-----GDLSKADYGWNNPVAEVVVSK 212
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI) HSP 1 Score: 164 bits (416), Expect = 6.200e-44 Identity = 106/238 (44.54%), Postives = 140/238 (58.82%), Query Frame = 2
Query: 293 MVKFTAGLALLAASALSLSNAAE--------YRVRVRNLTYQQPFSPPLVVAHTSDVA-LFQEGLVANDAIKLMAEDGDNSALLALAASDEVSPYICG--AVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLRT----TKVYPPAFDAGTEVNNELCSHMPGPACAADSGNMMDAPG---EGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 952
MVKF GLAL AS LSL++ ++ Y+VRV NLT++Q FS ++VAH LF EG A +AI ++AE+G + + +A + CG A S G +FPG+TW G + D C D V+S V+ L NTNDAFMGI +K +PPAFDAG+E NNE C+ MPG AC + + + G EGFIHVHRGF G+ G+LS+ Y W+NPVA V +SK
Sbjct: 1 MVKFAFGLAL--ASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEGLSGNVQNIATRER---GFCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPAGSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGI-----GDLSKD-YGWQNPVAVVVVSK 227
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG) HSP 1 Score: 137 bits (345), Expect = 8.940e-34 Identity = 95/223 (42.60%), Postives = 126/223 (56.50%), Query Frame = 2
Query: 305 TAGLALLAASALSLSNAAE-YRVRVRNLTYQQPFSPPLVVAHTSDVALFQEGLVANDAIKLMAEDGDNSALLALAASDEVSPYICGAVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLR---TTKVYPPAFDAGTEVNNELCSHMPGPACAADSGNMMDAPG--EGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISKQ 955
TA +LAA AL + + + V+NL Y QPFSP L V H + LFQ G A+ A++ +AE GD S +AL + ICG V+ G P T++GT+ + + C + S V+ML TNDAF GI++ L + + PA+DAGTE NNE C ++ G C +D PG EGF+HVHRG HGLN G LS YDWRNPVA + +S Q
Sbjct: 8 TATTLILAAVALPTEYVGKTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVAL--FQDGLEGICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPN--LDTPGLGEGFVHVHRGVHGLNVSKPG-LS-VDYDWRNPVAYITVSVQ 221
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: A0A7S2X629_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X629_9EUKA) HSP 1 Score: 132 bits (332), Expect = 5.650e-32 Identity = 86/219 (39.27%), Postives = 117/219 (53.42%), Query Frame = 2
Query: 341 SLSNAAEYRVRVRNLTYQQPFSPPLVVAHTSDVA-LFQEGLVANDAIKLMAEDGDNSALL-ALAASDEVSPYICGAVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLRTT---KVYPPAFDAGTEVNNELCSHMPGPACAADSGNMM-DAPGEGFIHVHRGFHGLNEG----------IAGE-LSETGYDWRNPVAEVFI 946
S + EY + + N +QQPFS V H SD L+ G A++ + ++AEDG+ L+ A AS+ V A P F G+T + V+E S +M INTND FMG++ + T + P D+GTE NNELC+H+PGPAC DSGN+ + EG +HVHRGF G+NEG +G+ LS GY W NP+A V I
Sbjct: 4 SAQASTEYVISITNAAFQQPFSGYFVAVHNSDAPPLYVLGEAASEELAILAEDGNPMPLVQAYNASEGVRETF--AFTDGAPYFAGDTASIAVDVNENY---PYVSLATMAINTNDCFMGLNGVKVFNTFKRVINLPGLDSGTEANNELCTHIPGPACLPDSGNLRANETSEGLVHVHRGFIGINEGNDDLTPAELGASGQPLSSAGYTWLNPMARVVI 217
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Match: A0A7U6JI78_9GAMM (Spondin domain-containing protein n=1 Tax=Thiolapillus brandeum TaxID=1076588 RepID=A0A7U6JI78_9GAMM) HSP 1 Score: 130 bits (327), Expect = 2.370e-31 Identity = 93/219 (42.47%), Postives = 119/219 (54.34%), Query Frame = 2
Query: 314 LALLAASALSLSNAAEYRVRVRNLTYQQPFSPPLVVAHTSDVALFQEGLVANDAIKLMAEDGDNSALLA-LAASDEVSPYICGAVVSDGPLFPGETWRGTMMVDETICPDAVFSAVSMLINTNDAFMGIDSDTLRTTKVYP-----PAFDAGTEVNNELCSHMPGPACAADSGNMMDAPGEGFIHVHRGFHGLNEGIAGELSETGYDWRNPVAEVFISK 952
LAL A A + S A +Y+V + NLT Q F+P LV H + +F G A+ ++ +AE GD S L A L AS EV V SDG L PG++ T+ + S SMLI TNDAF+GI + K P PA+DAGTE+N+ELCS++PGP C M GEGFI VH G HG+ G+L+ YDWRNP A V I +
Sbjct: 11 LALPLAFAATSSLADDYQVTITNLTQSQFFTPILVATHKRGMPVFIPGSAASSDLEALAEGGDISLLKATLDASSEVHE----TVASDGLLGPGQSVTLTLDDSKRF---RYLSLASMLIPTNDAFIGISGMKMPKKKNAPVMIPVPAYDAGTEMNDELCSNIPGPDCGG--AGMSVENGEGFISVHPGIHGV-----GDLAPGTYDWRNPAAMVKIER 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig742.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig742.31.1 >prot_P-littoralis_Contig742.31.1 ID=prot_P-littoralis_Contig742.31.1|Name=mRNA_P-littoralis_Contig742.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=274bp MRCQTFSRAPRTLSHRQDLNSPPSQHRRSCYHWNTAPPLSLFLTVSPLGNback to top mRNA from alignment at P-littoralis_Contig742:66021..71892+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig742.31.1 ID=mRNA_P-littoralis_Contig742.31.1|Name=mRNA_P-littoralis_Contig742.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5872bp|location=Sequence derived from alignment at P-littoralis_Contig742:66021..71892+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig742:66021..71892+ >mRNA_P-littoralis_Contig742.31.1 ID=mRNA_P-littoralis_Contig742.31.1|Name=mRNA_P-littoralis_Contig742.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=822bp|location=Sequence derived from alignment at P-littoralis_Contig742:66021..71892+ (Pylaiella littoralis U1_48)back to top |