mRNA_P-littoralis_Contig741.21.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 452 bits (1162), Expect = 2.030e-146 Identity = 225/335 (67.16%), Postives = 270/335 (80.60%), Query Frame = 1
Query: 1 AAAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHG 1005
A AAAG PP NA+V+TH+GQMVSDF++ G+FVGA+FDLFPHGVGGHLD+R R + + W QILLR+RD RFRK ++FL+CVCALIFRREAI NARWKL GRV A +AG+T +DL A A EME GS S LA+R IR LI ME V AG+SWTIYNKR TRMIAIS IMQMGQPL+WLT +PAD N PIV+ AGVE+DVTSRLKAD+P +A +LR VA D VASA F+H+ DAVLTC +RFGA DGDGGVLGRVKGY+GMTEEQ+RL L+CHLLVWV+GYNDF+SF +LMDK+P +Y +LA +L++VIFNQ+A+L+D+N M G
Sbjct: 386 ARAAAGQ-PPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMEFVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRG 719
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 459 bits (1180), Expect = 6.840e-146 Identity = 235/317 (74.13%), Postives = 256/317 (80.76%), Query Frame = 1
Query: 85 FYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHGHDHTSSGSSE 1035
FYD G+FV AFFDLFPHG+GGHLDERRR +SFQEW +ILLRQRDPRFRKHKSFLFCV ALIFRREAIKNARWKLTGR+S TA+TLA ITPEDLAAAA+EMEQGS S LANR+ +R L+TTMESV AGSSWTIYNKR TRMIAISLIMQ+GQPLWW+T PAD PI RLRLVA D VASA YHSVTDAVLTC +RF A DGDGGVL RVKGY+GMT+EQRRLML+ H+LVWV+G+NDFSSF DLMDK PEKYNKLARFLERVIFNQV S A+VN+AMHGHDHT SSE
Sbjct: 230 FYDEGLFVAAFFDLFPHGIGGHLDERRRYMSFQEWAKILLRQRDPRFRKHKSFLFCVWALIFRREAIKNARWKLTGRMSRRTAETLATITPEDLAAAAKEMEQGSSVWSALANRNAVRTLLTTMESVHAGSSWTIYNKRSTRMIAISLIMQIGQPLWWMTIGPADTKSPI------------------------RLRLVASDPVASALLYHSVTDAVLTCLLRFDARDGDGGVLERVKGYLGMTKEQRRLMLHFHVLVWVYGFNDFSSFRDLMDKRPEKYNKLARFLERVIFNQVVSFANVNLAMHGHDHTPRASSE 522
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 451 bits (1160), Expect = 3.390e-143 Identity = 225/335 (67.16%), Postives = 270/335 (80.60%), Query Frame = 1
Query: 1 AAAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHG 1005
A AAAG PP NA+V+TH+GQMVSDF++ G+FVGA+FDLFPHGVGGHLD+R R + + W QILLR+RD RFRK ++FL+CVCALIFRREAI NARWKL GRV A +A +T +DL A A EME GS S LA+R IR LI MESV AG+SWTIYNKR TRMIAIS IMQMGQPL+WLT +PAD N PIV+ AGVE+DVTSRLKAD+P +A +LR VA D VASA F+H+ DAVLTC +RFGA DGDGGVLGRVKGY+GMTEEQ+RL L+CHLLVWV+GYNDF+SF +LMDK+P +Y +LA +L++VIFNQ+A+L+D+N M G
Sbjct: 466 ARAAAGQ-PPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRG 799
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 432 bits (1111), Expect = 2.350e-134 Identity = 215/337 (63.80%), Postives = 271/337 (80.42%), Query Frame = 1
Query: 1 AAAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHGHD 1011
AA AG P+ AMV+TH+G++VSDF + G+F+ AF+DLFPHGVGG LD+RRR ++F+ W +ILL++RDPRFRKH++FLFCVCALIFRREAI+NAR+KL G +ST A LA +TP DL+ AA EME GS S+L IR+LI MESV +G+SWTI+NKR TRMIAIS ++QMGQPL WLT SPAD N PIV++ AGV+IDVTS+LK+D+PD+ ++LRLVA D VASA FYH+ VLTC +RFGA DGDGGVLGRVKGY+GMTEEQ+RLML+ HLLVW++GYNDF SF LMDK+P +Y +LAR+L+ ++FNQ+A+LAD+N M G D
Sbjct: 533 AAVRAGRPSPLGTDKAMVLTHSGKLVSDFSEPGLFIAAFYDLFPHGVGGPLDKRRRSLTFKRWARILLKRRDPRFRKHRTFLFCVCALIFRREAIENARFKLRGNISTRIASLLAKVTPADLSQAAAEME-GSFDFSSL--NEGIRSLIRMMESVSSGASWTIHNKRCTRMIAISYMIQMGQPLIWLTISPADHNSPIVMKLAGVDIDVTSKLKSDFPDYTEKLRLVASDPVASAQFYHNTIQGVLTCLLRFGASDGDGGVLGRVKGYVGMTEEQKRLMLHAHLLVWIYGYNDFVSFRALMDKTPRRYTELARYLDNIVFNQIATLADINRVMRGVD 866
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 431 bits (1107), Expect = 4.980e-134 Identity = 218/337 (64.69%), Postives = 252/337 (74.78%), Query Frame = 1
Query: 4 AAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHGHDH 1014
AAAA APP LP NAMV+THTG MVSDFYD G+FV A+F+LF HG+GGHLD RRR +S +EW QI LR+RD RF K K+F FCVCAL FRREA NARWK+ G + + A+TLA I+PED+ AAA+E+EQG+G+ S IMQMGQPLWW+TFSPAD N PIVLQ AGV IDVTSRLK+D+PD+ +RLRLVA DHV SAFFYHSVT AVLTC +RFGA DGDGGVLGRVK +GMTEEQRRLML+CHLLVWV+GYNDFS F +LMDKSPEKYNKLARFLE+VIFNQVA+L D N+A GH++
Sbjct: 512 AAAARRAPPFLPPNAMVVTHTGNMVSDFYDEGLFVVAYFNLFSHGIGGHLDVRRRPVSCKEWAQIFLRRRDGRFSKDKTFWFCVCALTFRREATNNARWKIKGGMPSDAAETLASISPEDIPAAAKELEQGTGSCD-------------------------------------SFIMQMGQPLWWMTFSPADTNSPIVLQLAGVTIDVTSRLKSDFPDYVERLRLVACDHVTSAFFYHSVTKAVLTCWLRFGATDGDGGVLGRVKACVGMTEEQRRLMLHCHLLVWVYGYNDFSIFRELMDKSPEKYNKLARFLEQVIFNQVATLTDTNLAFDGHEY 811
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 374 bits (961), Expect = 3.480e-114 Identity = 187/321 (58.26%), Postives = 238/321 (74.14%), Query Frame = 1
Query: 43 NAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHG 1005
N +V+ HTG+MV DF + GV + A+FDLFPHGVGGHLD+R+R ++F +W + LLR+RDPRFRK+++F+FC+ A+IFRREAI NA WKLTGRVS AQ L GITP+DL A ARE+E G+ + LANR R LI TM+SV +SWT++NKR RM AIS+I+Q+GQPL+W+T +PAD+N P+V++ AGV++DV+SRLK D P + KRL+L+A D VASA F+H + DAV+ +RFGA DGDGGVLGRVK Y+GMTEEQRRL L+CHLLVWV Y +LA FL R IF+QVAS DV AM G
Sbjct: 2606 NMLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAARQLIRTMQSVNGDASWTMFNKRTLRMKAISMIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWV-------------------YQELASFLSRTIFSQVASDEDVQHAMTG 2907
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 330 bits (845), Expect = 1.180e-98 Identity = 159/243 (65.43%), Postives = 201/243 (82.72%), Query Frame = 1
Query: 277 EAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHG 1005
EAI+NARWKLTGR+S ++TL+ +TPEDLA AA ME G G S L++R+ I ALI TMESV AG+SWT +NKR TRMIAIS IMQMGQPL W+T +PAD N PIV++ GV+IDV+S+LKA++PD+ +LRLVA D VASA F+H+ D VL+C +RFGA DGDGG+LGRVKGY+GMTEEQ+RL+L+CHLLVWVFGYNDF+SF DLMD++P +Y +LA++L+ +IFNQVA+LAD+ MHG
Sbjct: 558 EAIENARWKLTGRISPADSRTLSAVTPEDLADAAAAMENGRGNGSVLSDRAGIAALIKTMESVHAGASWTPHNKRSTRMIAISYIMQMGQPLIWMTINPADVNSPIVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHG 800
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5J5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A5_9PHAE) HSP 1 Score: 283 bits (724), Expect = 3.910e-83 Identity = 162/269 (60.22%), Postives = 179/269 (66.54%), Query Frame = 1
Query: 229 KHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHGHDHTSSGSSE 1035
KHKSFLF VC LIFRREAIKNARWKLTGRVS TA+TLA ITPEDLAAA +EMEQGS A S LANR+ +R L+TTMESV AGSSWTIYNK + VASA +YHSVTDAVLT +R A DGDGGVLGRVKGY+GMTEEQRR+ML+ H++VWV+G+N+FSSF DLMDK PEKY KLARFLERVIFNQVAS ADVN+AMHGHDHT SSE
Sbjct: 348 KHKSFLFFVCVLIFRREAIKNARWKLTGRVSRRTAETLATITPEDLAAAGKEMEQGSSAWSALANRNAVRTLLTTMESVHAGSSWTIYNK-------------------------------------------------------------SERSVASALYYHSVTDAVLTWLLRVDARDGDGGVLGRVKGYLGMTEEQRRVMLHSHVVVWVYGFNEFSSFRDLMDKRPEKY-KLARFLERVIFNQVASFADVNLAMHGHDHTPRASSE 554
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5K657_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K657_9PHAE) HSP 1 Score: 241 bits (614), Expect = 7.710e-72 Identity = 130/309 (42.07%), Postives = 186/309 (60.19%), Query Frame = 1
Query: 16 GLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHL-DERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLAR 939
G PP SNA+V+ H G+++ D +N +V FP G G L R+R +SF W QILL +RD +R + FLFCV A+ FR EA+ N R+KL+ + ++ A +A IT E L A A E++ G S+ L NR +IR+L+ TM++V ++WT + K R A S+ + GQP +W+T +P+D N P V+ G +I+++S PD KRL ++ D VASA F+H +AVL +RF A DGDGG LG +K YIGMTEEQ RLML+ HL+VWV G+ + S +K+ +LA+
Sbjct: 205 GQPPPGGTSNALVVPH-GEILDDCNNNSAWVEGVMHAFPEGCGSPLCPTRKRLVSFNRWIQILLNRRDSSWRIDRCFLFCVAAIRFRHEALANVRFKLSVQPNSANADAIASITKEHLHAMAEELKSGKKTSAVLNNRPEIRSLLRTMQAVSGDATWTDHGKHRARTTAHSMFILFGQPFFWMTVNPSDLNSPFVMHYGGHDINLSSTCHEQMPDFRKRLDIIVNDPVASAIFFHETIEAVLKYILRFQANDGDGGPLGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTSREQLRQDVGYSLKKHAELAK 512
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5K355_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K355_9PHAE) HSP 1 Score: 228 bits (580), Expect = 1.660e-65 Identity = 135/335 (40.30%), Postives = 190/335 (56.72%), Query Frame = 1
Query: 16 GLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHL-DERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLAR------FLERVIFNQVASLADVNMAM 999
G PP SNA+V+ H G+++ D +N +V F FP G GG L RR +SF W QILL + D +R + FL C A+ FR EAI N R+KL+ R ++ A +A IT EDL A E++ G S+ NR +IRAL ++V ++WT + K A S+ +Q G P +W+T +P+D N P V+Q ++ KRL + D VASA F+H +AV+ +RFGA DGDGG LG +K YIGMTEEQ RLML+ HL+VWV G+ D + +S +K+ KLAR ++ R+I+NQV SL +V ++
Sbjct: 158 GRPPPGGTSNALVVPH-GEILDDSNNNSAWVEGFMHAFPGGCGGPLCPTRRNPVSFNRWIQILLNRGDIAWRVDRCFLCCAAAIRFRHEAISNVRFKLSVRPNSTDANAIASITKEDLHGMADELKSGKRTSALKNNRPEIRALFRKTQAVSGDATWTDHGKHRVLATAHSMFIQFGLPFFWMTANPSDVNSPCVMQCG---------------EYRKRLDITVNDPVASATFFHETMEAVVKYILRFGAKDGDGGALGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTS-RELRDDIGRSLKKHAKLARVQEVLYYIGRLIYNQVMSLEEVEFSL 475 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig741.21.1 >prot_P-littoralis_Contig741.21.1 ID=prot_P-littoralis_Contig741.21.1|Name=mRNA_P-littoralis_Contig741.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp AAAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHback to top mRNA from alignment at P-littoralis_Contig741:74025..75061+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig741.21.1 ID=mRNA_P-littoralis_Contig741.21.1|Name=mRNA_P-littoralis_Contig741.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1037bp|location=Sequence derived from alignment at P-littoralis_Contig741:74025..75061+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig741:74025..75061+ >mRNA_P-littoralis_Contig741.21.1 ID=mRNA_P-littoralis_Contig741.21.1|Name=mRNA_P-littoralis_Contig741.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig741:74025..75061+ (Pylaiella littoralis U1_48)back to top |