mRNA_P-littoralis_Contig738.26.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig738.26.1
Unique NamemRNA_P-littoralis_Contig738.26.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE)

HSP 1 Score: 604 bits (1557), Expect = 3.580e-202
Identity = 325/573 (56.72%), Postives = 396/573 (69.11%), Query Frame = 1
Query:  289 LDRDISVCGKDRVVKHTWQKHPRGYSLTSVLLKVGSKRPAGSGVGPTVVDDESGLDLAGREHAETLKTRAEQRTRKAPAXXXXXXXX--------AKR--RLGADAALSRSSPLATAITTGSKRAGRASEAEQPRVQTAEEKHRADVVEMVEKDPVLAEEIREVLRESEQEQRRVD--AVNAENTRSLAASLASLQLNCKSETGRIAYNTALAVAAGAGEHTCSPDDPCDPAARCPPAQPASGVNLTERAASLGVRDKTFREARARMHHVDHSLAPSEAVEQGRYCWAERKTRCDKTDTRVLDLAYRFWHSDDVSRGCGDSGTKNMWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCGCLVEPEVSQCACQIHTQQSQYLDALEFLMGGVHGRDCDCACDWCDG-AGCQKWTGMCKNLHSFSEALACAKVNLLEGDPSGGVEHWARKPACTAGSCDECGFGNPNGIPTDCQAFEKHSHRLVGWLRFEDQTMEDGTVHKKQQIPQTGSLGTLWKEFMAHSLLYMEHHELAKWQHQAHNTSMMTF 1968
            L RD+ + G+ RV++H W+ HPRGY LTS LLK G++  A   +G +VVD+  G+    REH + L+ RA +R      XXXXXXXX        A+R  RLGADA L+RS PL   + +G +R+ + +     + QTA + HR  V + V +D VL EE+RE+LR  E  +      AV+AENTR+L AS+ +L+ +  S  GR AYNT +A AAGA +HTC PDDP               V+LT RA SLGVRD TFR AR RMH  DH++ P EA+E+GRY WA RK R DK D RV+ LA RFWHSDD+SR  GDSGTK MWRPSK+ GE YH +RQLMV+GD+V+HKFL+WP+YL L+A+LL+ED++F DPGRT FLSTRCGCLVEP+VSQCACQIHTQQ  YL A E LM  +H  +CDC C WCDG +GC KW  MCK+LHSFSEALAC KV+ LE D  G  EHW RKPAC A  C ECGFGNP GIP +C A    + R+VGWLRF DQ MEDG VHKKQQ+PQ G LG LW+EF+ HS  Y+ HHELAKWQ QAHN  + TF
Sbjct:    2 LRRDVKIAGEARVIRHRWRTHPRGYHLTSTLLKKGTETAATKAIG-SVVDNLEGVVRMAREHVDDLQERATKRXXXXXXXXXXXXXXXXXXXXXXAERGPRLGADARLARSDPLEAHLFSGPRRSPQPTTTPPRQRQTAIDGHRDGVKQSVLEDDVLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHA-NCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNMCLATF 571          
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 605 bits (1559), Expect = 1.930e-195
Identity = 326/577 (56.50%), Postives = 397/577 (68.80%), Query Frame = 1
Query:  277 AMPSLDRDISVCGKDRVVKHTWQKHPRGYSLTSVLLKVGSKRPAGSGVGPTVVDDESGLDLAGREHAETLKTRAEQRTRKAPAXXXXXXXX--------AKR--RLGADAALSRSSPLATAITTGSKRAGRASEAEQPRVQTAEEKHRADVVEMVEKDPVLAEEIREVLRESEQEQRRVD--AVNAENTRSLAASLASLQLNCKSETGRIAYNTALAVAAGAGEHTCSPDDPCDPAARCPPAQPASGVNLTERAASLGVRDKTFREARARMHHVDHSLAPSEAVEQGRYCWAERKTRCDKTDTRVLDLAYRFWHSDDVSRGCGDSGTKNMWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCGCLVEPEVSQCACQIHTQQSQYLDALEFLMGGVHGRDCDCACDWCDG-AGCQKWTGMCKNLHSFSEALACAKVNLLEGDPSGGVEHWARKPACTAGSCDECGFGNPNGIPTDCQAFEKHSHRLVGWLRFEDQTMEDGTVHKKQQIPQTGSLGTLWKEFMAHSLLYMEHHELAKWQHQAHNTSMMTF 1968
            A   L RD+ + G+ RV++H W+ HPRGY LTS LLK G++  A   +G +VVD+  G+    REH + L+ RA +R      XXXXXXXX        A+R  RLGADA L+RS PL   + +G +R+ + +     + QTA + HR  V + V +D VL EE+RE+LR  E  +      AV+AENTR+L AS+ +L+ +  S  GR AYNT +A AAGA +HTC PDDP               V+LT RA SLGVRD TFR AR RMH  DH++ P EA+E+GRY WA RK R DK D RV+ LA RFWHSDD+SR  GDSGTK MWRPSK+ GE YH +RQLMV+GD+V+HKFL+WP+YL L+A+LL+ED++F DPGRT FLSTRCGCLVEP+VSQCACQIHTQQ  YL A E LM  +H  +CDC C WCDG +GC KW  MCK+LHSFSEALAC KV+ LE D  G  EHW RKPAC A  C ECGFGNP GIP +C A    + R+VGWLRF DQ MEDG VHKKQQ+PQ G LG LW+EF+ HS  Y+ HHELAKWQ QAHN  + TF
Sbjct:  622 AATMLRRDVKIAGEARVIRHRWRTHPRGYHLTSTLLKKGTETAATKAIG-SVVDNLEGVARMAREHVDDLQERATKRXXXXXXXXXXXXXXXXXXXXXXAERGPRLGADARLARSDPLEAHLFSGPRRSPQPTTTPPRQRQTAIDGHRDGVKQSVLEDDVLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHA-NCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNMCLATF 1195          
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE)

HSP 1 Score: 545 bits (1404), Expect = 1.340e-178
Identity = 309/565 (54.69%), Postives = 387/565 (68.50%), Query Frame = 1
Query:  289 LDRDISVCGKDRVVKHTWQKHPRGYSLTSVLLKVGSKRPAGSGVGPTVVDDESGLDLAGREHAETLKTRAEQRTRKAPAXXXXXXXX----AKRRLGADAALSRSSPLATAITTGSKRAGRASEAEQPRVQTAEEKHRADVVEMVEKDPVLAEEIREVLRE--SEQEQRRVDAVNAENTRSLAASLASLQLNCKSETGRIAYNTALAVAAGAGEHTCSPDDPCDPAARCPPAQPASGVNLTERAASLGVRDKTFREARARMHHVDHSLAPSEAVEQGRYCWAERKTRCDKTDTRVLDLAYRFWHSDDVSRGCGDSGTKNMWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCGCLVEPEVSQCACQIHTQQSQYLDALEFLMGGVHGRDCDCACDWCDGAGCQKWTGMCKNLHSFSEALACAKVNLLEGDPSGGVEHWARKPACTAGSCDECGFGNPNGIPTDCQAFEKHSHRLVGWLRFEDQTMEDGTVHKKQQIPQTGSLGTLWKEFMAHSLLYMEHHELAKWQHQAHNTSMMT 1965
            +DR I + G++RVV+   + H RG  L S LL+ G+   AG  V  +VV DE  L   GREH E ++ RA +R ++ PAXXXXXXXX    AKR+ GADAALS   PLA A   G+ R+G   E    R +   E+ R+  +++++ DPVL E +R +L    +EQ   +V A++A NTR+L ASL +L+ +C S  G   Y TALAVAAGAGEHTC+  D C P  RC P + + GV+L ERA SLG+R +TF +AR RMH+ +H +AP  A  +G Y + ERKTR D T+  V+ LA  FWHSDDVSR  G+SG K+M++ SK+     H +RQLM  GD V+  FL   +YLAL++ LL++DS F DPGRTTFLSTRCGCLV+P  SQCACQIHTQQ+ YL+AL FLMG +H +DCDC C+WCD  GC++W+ MC++L  FS+ALAC KVNLLEGD  GG E W RKPAC A  C ECGFG P GIPT+C A  K+  R+V W+RFEDQTM DG VHKKQQ+PQTG L  LW EFMAHS  YMEHH LAKWQ QAH   M T
Sbjct:    3 VDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPV-QSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRK-GADAALS--DPLALAHDGGT-RSGATPETS--REEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVE-SGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIH-QDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHS--YMEHHALAKWQRQAHKMCMAT 555          
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE)

HSP 1 Score: 520 bits (1338), Expect = 2.780e-174
Identity = 294/543 (54.14%), Postives = 373/543 (68.69%), Query Frame = 1
Query:  289 LDRDISVCGKDRVVKHTWQKHPRGYSLTSVLLKVGSKRPAGSGVGPTVVDDESGLDLAGREHAETLKTRAEQRTRKAPAXXXXXXXX----AKRRLGADAALSRSSPLATAITTGSKRAGRASEAEQPRVQTAEEKHRADVVEMVEKDPVLAEEIREVLRE--SEQEQRRVDAVNAENTRSLAASLASLQLNCKSETGRIAYNTALAVAAGAGEHTCSPDDPCDPAARCPPAQPASGVNLTERAASLGVRDKTFREARARMHHVDHSLAPSEAVEQGRYCWAERKTRCDKTDTRVLDLAYRFWHSDDVSRGCGDSGTKNMWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCGCLVEPEVSQCACQIHTQQSQYLDALEFLMGGVHGRDCDCACDWCDGAGCQKWTGMCKNLHSFSEALACAKVNLLEGDPSGGVEHWARKPACTAGSCDECGFGNPNGIPTDCQAFEKHSHRLVGWLRFEDQTMEDGTVHKKQQIPQTGSLGTLWKEFMAHSL 1899
            +DR I + G++RVV+   + H RG  L S LL+ G+   AG  V  +VV DE  L   GREH E ++ RA +R ++ PAXXXXXXXX    AKR+ GADAALS   PLA A   G+ R+G   E    R +   E+ R+  +++++ DPVL E +R +L    +EQ   +V A++A NTR+L ASL +L+ +C S  G   Y TALAVAAGAGEHTC+  D C P  RC P + + GV+L ERA SLG+R +TF +AR RMH+ +H +AP  A  +G Y + ERKTR D T+  V+ LA  FWHSDDVSR  G+SG K+M++ SK+     H +RQLM  GD V+  FL   +YLAL++ LL++DS F DPGRTTFLSTRCGCLV+P  SQCACQIHTQQ+ YL+AL FLMG +H +DCDC C+WCD  GC++W+ MC++L  FS+ALAC KVNLLEGD  GG E W RKPAC A  C ECGFG P GIPT+C A  K+  R+V W+RFEDQTM DG VHKKQQ+PQTG L  LW EFMAHS+
Sbjct:    3 VDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPV-QSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRK-GADAALS--DPLALAHDGGT-RSGATPETS--REEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVE-SGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIH-QDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHSV 535          
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5KI39_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI39_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 6.360e-148
Identity = 198/306 (64.71%), Postives = 231/306 (75.49%), Query Frame = 1
Query: 1051 MHHVDHSLAPSEAVEQGRYCWAERKTRCDKTDTRVLDLAYRFWHSDDVSRGCGDSGTKNMWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCGCLVEPEVSQCACQIHTQQSQYLDALEFLMGGVHGRDCDCACDWCDGAGCQKWTGMCKNLHSFSEALACAKVNLLEGDPSGGVEHWARKPACTAGSCDECGFGNPNGIPTDCQAFEKHSHRLVGWLRFEDQTMEDGTVHKKQQIPQTGSLGTLWKEFMAHSLLYMEHHELAKWQHQAHNTSMMTF 1968
            MH  DH++ P +A+E+GRY WA RK R DK D RV+DLA RFWHSDD+SR  GDSGT+ +WRPSK+ GE YH +RQLMV+GD+V+ KFL+WP+YL L+A+LL+EDS+F DPGRT FLSTRCGCLVEP+VSQCACQIHTQQ  Y  A E LM  +H  +C+C C+WCDG+GC KW  MCK+LHSFSEALAC K   L     G  EHW RKPAC A  C E GFGNP GIP +C A    + R+VGWLRFEDQ MEDG VHKKQQ+PQ G LG LW E + HS  YM HHELAKWQ QAHN  + TF
Sbjct:    1 MHKTDHTIPPKDALEKGRYLWAPRKERTDKMDERVMDLARRFWHSDDISRASGDSGTEAVWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTMFLSTRCGCLVEPKVSQCACQIHTQQGLYHKAFEMLMPAIHA-NCECTCNWCDGSGCGKWMAMCKDLHSFSEALACEKAGFLAEGRGGRFEHWGRKPACVAMECPEYGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQLPQAGKLGDLWDEVVEHSKKYMHHHELAKWQRQAHNMCLATF 305          
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 2.330e-144
Identity = 204/307 (66.45%), Postives = 235/307 (76.55%), Query Frame = 1
Query: 1051 MHHVDHSLAPSEAVEQGRYCWAERKTRCDKTDTRVLDLAYRFWHSDDVSRGCGDSGTKNMWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCGCLVEPEVSQCACQIHTQQSQYLDALEFLMGGVHGRDCDCACDWCDG-AGCQKWTGMCKNLHSFSEALACAKVNLLEGDPSGGVEHWARKPACTAGSCDECGFGNPNGIPTDCQAFEKHSHRLVGWLRFEDQTMEDGTVHKKQQIPQTGSLGTLWKEFMAHSLLYMEHHELAKWQHQAHNTSMMTF 1968
            MH  DH++ P EA+E+GRY WA RK R DK D RV+ LA RFWHSDD+SR  GDSGTK MWRPSK+ GE YH +RQLMV+GD+V+HKFL+WP+YL L+A+LL+EDS+F DPGRT FLSTRCGCLVEP++S CACQIHTQQ  YL  +E LM  +H  +CDC C  CDG +GC KW  MCK+LHSFSEALAC KV+ LE D  G  EHW RKPAC A  C ECGFGNP GIP +C A    + R+VGWLRFEDQ MEDG VHKKQQIPQ G L  LWKEF+ HS  Y+ HHELAKWQ QAHN  + TF
Sbjct:    1 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKISPCACQIHTQQGLYLK-VEMLMPAMHS-NCDCTCKRCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGKFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMCLATF 305          
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 8.540e-103
Identity = 162/284 (57.04%), Postives = 188/284 (66.20%), Query Frame = 1
Query: 1228 MWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCG-----------------------------------CL-VEPEVSQCACQIHTQQSQYLDALEFLMGGVHGRDCDCACDWCDG-AGCQKWTGMCKNLHSFSEALACAKVNLLEGDPSGGVEHWARKPACTAGSCDECGFGNPNGIPTDCQAFEKHSHRLVGWLRFEDQTMEDGTVHKKQQIPQTGSLGTLWKEFMAHSLLYMEHHELAKWQHQAHNTSMMTF 1968
            MWRPSK+ GE Y  +RQLMV+GD+ + KFL+WP+YL L+A+LL+ED++F DPGRT FLSTRCG                                   C+ VEP+VSQCACQIHTQQ  YL A E LM  +H  +CDC C WCDG +GC KW  MCK+LHSFSEAL C KV+ LE D  G  EHW  KPAC A  C EC FGNP+ IP +C A    + R+VGWLRFEDQ MEDG VHKKQQIPQ G LG LWKEF+ HS  Y+ HHELAKWQ QAHN  + TF
Sbjct:    1 MWRPSKKAGEEYQPRRQLMVAGDQAWRKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGDRSSVMDSSAVSPPQEDGLFADPLSSFLSVSTVRLCVTVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHA-NCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALDCEKVDCLEEDRGGRFEHWGGKPACVAMECSECRFGNPDDIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLGDLWKEFVEHSKKYIHHHELAKWQRQAHNMCLATF 283          
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5JE40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE40_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 4.360e-90
Identity = 131/190 (68.95%), Postives = 152/190 (80.00%), Query Frame = 1
Query: 1051 MHHVDHSLAPSEAVEQGRYCWAERKTRCDKTDTRVLDLAYRFWHSDDVSRGCGDSGTKNMWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCGCLVEPEVSQCACQIHTQQSQYLDALEFLMGGVHGRDCDCACDWCDG-AGCQKWTGMCKNLHSFSEALA 1617
            MH  DH++ P EA+E+GRY WA RK R DK D RV+ LA RFWHSDD+SR  GDSGTK MWRPSK+ GE YH +RQLMV+GD+V+ KFL+WP+YL L+A+LL+EDS+F DPGRT FLSTRCGCLVEP+VSQCACQIHTQQ  YL A E LM  +H  +CDC C WCDG +GC KW  MCK LHSFSEALA
Sbjct:    1 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHA-NCDCTCKWCDGGSGCGKWMAMCKYLHSFSEALA 189          
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 9.250e-90
Identity = 141/230 (61.30%), Postives = 165/230 (71.74%), Query Frame = 1
Query: 1282 MVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCGCLVEPEVSQCACQIHTQQSQYLDALEFLMGGVHGRDCDCACDWCDG-AGCQKWTGMCKNLHSFSEALACAKVNLLEGDPSGGVEHWARKPACTAGSCDECGFGNPNGIPTDCQAFEKHSHRLVGWLRFEDQTMEDGTVHKKQQIPQTGSLGTLWKEFMAHSLLYMEHHELAKWQHQAHNTSMMTF 1968
            MV+GD+V+HKFL+WP+Y+ L+A+LL+EDS+F DPGRT FLSTRCGC VEP+VS+CACQ HTQQ   L A E LM   H  +CDC C WCDG +GC KW  MCK+LHSFSEALAC KV+ LE D  G  EHW RKPAC A  C ECGFGNP GIP +C A    + R+VGWLRF DQ MEDG VHKKQQ+PQ G LG LW+EF+ HS            + QAHN  + TF
Sbjct:    1 MVAGDQVWHKFLKWPEYMGLKAELLREDSSFTDPGRTLFLSTRCGCSVEPKVSKCACQTHTQQGIDLKAFEMLMPATHA-NCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSK-----------KRQAHNICLATF 218          
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Match: A0A6H5KAT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT1_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 7.550e-77
Identity = 177/390 (45.38%), Postives = 229/390 (58.72%), Query Frame = 1
Query:  289 LDRDISVCGKDRVVKHTWQKHPRGYSLTSVLLKVGSKRPAGSGVGPTVVDDESGLDLAGREHAETLKTRAEQRTRKAPAXXXXXXXX--------AKR--RLGADAALSRSSPLATAITTGSKRAGRASEAEQPRVQTAEEKHRADVVEMVEKDPVLAEEIREVLRESEQEQRRVD--AVNAENTRSLAASLASLQLNCKSETGRIAYNTALAVAAGAGEHTCSPDDPCDPAARCPPAQPASGVNLTERAASLGVRDKTFREARARMHHVDHSLAPSEAVEQGRYCWAERKTRCDKTDTRVLDLAYRFWHSDDVSRGCGDSGTKNMWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQYLALRADLLQEDSTFQDPGRTTFLSTRCGCL 1422
            L RDI + G+ RV+KH W  H RGY LTS LLK G++  A   +G +VVDD  G+    REH + ++ RA +R      XXXXXXXX        A+R  RLGAD  L+RS PL   + +G +R+ + +     + QTA ++HR  V + V +D VL EE+RE+L   E  +      AV+AEN R+L AS+ +L+L+  S  GR AYNT +A AAGA EHTC PDDP                                                +EA+E+GRY WA RK R DK D RV+ LA RFWH+  +S      GTK MWRPSK+ GE YHS+RQLMV+GD+V+ KFL+WP+YL L+A+LL+EDS+F DPGRT FLSTRCGCL
Sbjct:    2 LRRDIKIAGEARVIKHRWSTHARGYQLTSTLLKKGTETAATKAIG-SVVDDLEGVVHMAREHVDDVRERATKRXXXXXXXXXXXXXXXXXXXXXAAERGPRLGADTRLARSDPLEALLFSGPRRSPQPTTTPPRQRQTAIDRHRDGVKQSVLEDDVLKEELRELLCVGELGEAAATKAAVDAENIRALVASIETLKLHSHSNIGRAAYNTVIAAAAGA-EHTCDPDDPXX----------------------------------XXXXXXXXXXQGAEALEKGRYLWAPRKERSDKMDERVMGLARRFWHTAVLSYTL--VGTKAMWRPSKKAGEEYHSRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFADPGRTLFLSTRCGCL 353          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig738.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT99_9PHAE3.580e-20256.72Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWW3_9PHAE1.930e-19556.50MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5K7E6_9PHAE1.340e-17854.69Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF90_9PHAE2.780e-17454.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI39_9PHAE6.360e-14864.71Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K491_9PHAE2.330e-14466.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY26_9PHAE8.540e-10357.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JE40_9PHAE4.360e-9068.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXG9_9PHAE9.250e-9061.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAT1_9PHAE7.550e-7745.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig738contigP-littoralis_Contig738:123489..126422 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2241
Hectar predicted targeting categoryother localisation
Exons5
Cds size1707
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig738.26.1prot_P-littoralis_Contig738.26.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig738 123768..126167 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791525.0957627-UTR-P-littoralis_Contig738:123488..1237671680791525.0957627-UTR-P-littoralis_Contig738:123488..123767Pylaiella littoralis U1_48UTRP-littoralis_Contig738 123489..123767 +
1680791525.1835272-UTR-P-littoralis_Contig738:126167..1264221680791525.1835272-UTR-P-littoralis_Contig738:126167..126422Pylaiella littoralis U1_48UTRP-littoralis_Contig738 126168..126422 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791525.1086183-CDS-P-littoralis_Contig738:123767..1241601680791525.1086183-CDS-P-littoralis_Contig738:123767..124160Pylaiella littoralis U1_48CDSP-littoralis_Contig738 123768..124160 +
1680791525.1266093-CDS-P-littoralis_Contig738:124339..1248831680791525.1266093-CDS-P-littoralis_Contig738:124339..124883Pylaiella littoralis U1_48CDSP-littoralis_Contig738 124340..124883 +
1680791525.1371653-CDS-P-littoralis_Contig738:125046..1252531680791525.1371653-CDS-P-littoralis_Contig738:125046..125253Pylaiella littoralis U1_48CDSP-littoralis_Contig738 125047..125253 +
1680791525.1505618-CDS-P-littoralis_Contig738:125423..1259021680791525.1505618-CDS-P-littoralis_Contig738:125423..125902Pylaiella littoralis U1_48CDSP-littoralis_Contig738 125424..125902 +
1680791525.1691825-CDS-P-littoralis_Contig738:126083..1261671680791525.1691825-CDS-P-littoralis_Contig738:126083..126167Pylaiella littoralis U1_48CDSP-littoralis_Contig738 126084..126167 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig738.26.1

>prot_P-littoralis_Contig738.26.1 ID=prot_P-littoralis_Contig738.26.1|Name=mRNA_P-littoralis_Contig738.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=569bp
MPSLDRDISVCGKDRVVKHTWQKHPRGYSLTSVLLKVGSKRPAGSGVGPT
VVDDESGLDLAGREHAETLKTRAEQRTRKAPAAAAAAAPPAKRRLGADAA
LSRSSPLATAITTGSKRAGRASEAEQPRVQTAEEKHRADVVEMVEKDPVL
AEEIREVLRESEQEQRRVDAVNAENTRSLAASLASLQLNCKSETGRIAYN
TALAVAAGAGEHTCSPDDPCDPAARCPPAQPASGVNLTERAASLGVRDKT
FREARARMHHVDHSLAPSEAVEQGRYCWAERKTRCDKTDTRVLDLAYRFW
HSDDVSRGCGDSGTKNMWRPSKQTGEAYHSKRQLMVSGDEVFHKFLRWPQ
YLALRADLLQEDSTFQDPGRTTFLSTRCGCLVEPEVSQCACQIHTQQSQY
LDALEFLMGGVHGRDCDCACDWCDGAGCQKWTGMCKNLHSFSEALACAKV
NLLEGDPSGGVEHWARKPACTAGSCDECGFGNPNGIPTDCQAFEKHSHRL
VGWLRFEDQTMEDGTVHKKQQIPQTGSLGTLWKEFMAHSLLYMEHHELAK
WQHQAHNTSMMTFLHKNK*
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mRNA from alignment at P-littoralis_Contig738:123489..126422+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig738.26.1 ID=mRNA_P-littoralis_Contig738.26.1|Name=mRNA_P-littoralis_Contig738.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2934bp|location=Sequence derived from alignment at P-littoralis_Contig738:123489..126422+ (Pylaiella littoralis U1_48)
AGACCGGTTCTAGGCTCTACAGGACCGGTTCTAGGCTCTACAGGACGGGA GGAAACGAAAAAAAAGGTTCACTTTTTTTTTTTGTTTTTTTTCAAGGTAC TTTTGGACTGAAACAGATGCGGCGGAACCAAGTTCACCGGAACCCCGACC GAACCACGATTTGTGAACAGCGGCAATCGACTCCGCCTGGTCGAATTAGA TACGGAGGACACAGCTTCCGTGGTCGTCCGACTCAAACTCCAAGAGCTAC GGCCCTGTTGACTTAGCCAGCTGGAGGCCATGCCGTCGCTGGACCGCGAC ATCTCAGTTTGTGGGAAGGATAGAGTCGTTAAACACACGTGGCAGAAGCA CCCTCGCGGGTACAGTTTAACCTCGGTTCTGCTGAAAGTGGGCTCCAAAC GGCCTGCTGGTTCGGGAGTGGGCCCTACTGTGGTTGATGATGAGTCGGGG CTGGACCTCGCTGGACGGGAGCATGCTGAAACCCTCAAAACCCGAGCAGA ACAACGAACGCGCAAGGCACCAGCAGCAGCAGCAGCAGCAGCGCCTCCCG CCAAAAGGAGGCTTGGCGCAGACGCAGCGCTCTCTCGCTCCTCGCCTCTG GCAACGGCGATCACGACCGGGTCCAAAAGGGCAGGTCGGGCTAGTGAGGC AGAACAGCCACGAGTACAAACGGTGAGTTCAAGTGTAAGCAGCACGACCA AACATGCAAAGTGTCTGTCGCGGGGTGTCGCCGGTGGCGTGTACGGCGCG GGCTACCGGCCTCTGTTATACTCTGTATCATGTACACAGCAGACCTCTCT CATTTTGGCATGCTTCCCCTCTTCTTTGCAAAAACATTGCTCCTGCAACA GGCGGAAGAAAAGCACCGCGCTGATGTAGTAGAGATGGTGGAGAAGGACC CAGTGTTGGCGGAAGAGATCAGGGAAGTGCTGCGGGAGTCGGAGCAGGAG CAGAGGCGGGTAGATGCAGTCAATGCGGAGAACACTCGCTCTCTGGCCGC TTCTTTGGCGTCGTTGCAGCTGAACTGCAAGAGCGAAACCGGCCGCATCG CGTACAACACGGCGCTGGCGGTGGCCGCTGGAGCAGGGGAGCATACGTGC TCTCCTGACGACCCATGCGACCCCGCCGCGCGGTGCCCACCCGCTCAGCC AGCAAGTGGAGTCAACTTGACCGAGCGAGCAGCGAGTCTCGGAGTGAGGG ACAAAACTTTCCGTGAGGCGCGCGCTCGGATGCACCATGTCGACCATTCC TTGGCTCCCTCGGAGGCTGTGGAACAGGGGCGCTACTGCTGGGCGGAGCG TAAGACACGTTGTGACAAGACAGACACCCGTGTGCTGGACTTGGCCTACA GGTTTTGGCACTCGGACGACGTCTCGCGTGGGTGTGGAGATTCAGGTATG TGTAGAGTCGCTACCGGCTTGGACTTCCTCCTTTTTATATTTTTATCACC ACGCTGCTGCCATCTCTTTGTAGTTCGTTCGTTAGGTTAATCTCATGTAC AACACCCCCCCTCCCTCCCCCGCCGCTGTTCACCCCTCCCCTCCCTGCCG CTGTTCAGGGACAAAAAACATGTGGAGACCTTCCAAGCAGACGGGGGAGG CGTACCATTCCAAGAGGCAGCTCATGGTCTCGGGGGACGAGGTATTTCAC AAGTTTCTGCGGTGGCCGCAGTACCTGGCGCTCAGGGCGGACCTACTGCA GGAGGACAGCACCTTCCAAGACCCTGGTCGCACGACGTTCCTCTCCACGC GATGTGGATGTTTGGGTGAGTCAATATACGGGTTATGTTAGTGGGAGCAA AGGGAGAGGGGTTTTGCGGTTGATGCTTTTGCGGCATGCGCGAGCAAACG GTGAACGAGTGCTGACCTGGTCTTTCTTCTCTGCCTCCCCTTGTCCTTTT CTCCATCGACCTTTGCCGCTTATTGTAATGTCTAGTGGAGCCCGAGGTGT CGCAGTGTGCGTGCCAAATCCACACGCAGCAGTCGCAATACCTCGACGCC TTGGAGTTTTTGATGGGAGGCGTACACGGCAGGGATTGCGACTGTGCGTG CGACTGGTGTGATGGGGCGGGTTGTCAGAAGTGGACTGGCATGTGCAAAA ATCTCCACAGCTTTTCAGAAGCGCTTGCTTGCGCGAAGGTAAACTTGCTG GAGGGGGATCCGAGCGGTGGGGTCGAGCACTGGGCACGAAAGCCGGCGTG CACTGCCGGATCGTGCGACGAGTGCGGGTTCGGGAATCCCAACGGCATCC CGACCGACTGCCAGGCTTTCGAGAAGCATTCCCACCGGCTGGTAGGGTGG CTTAGGTTTGAGGACCAAACGATGGAGGATGGCACGGTGCACAAGAAGCA GCAAATACCGCAGACGGGGTCTTTGGGTACGCTGTGGAAAGAGTTCATGG CGCACTCCCTGCTGGTAAGTTGACCGGTAGCATTGTATGGATTCCGTGTG GCAGTTGTTTTCAACGTTCAGCATTTTCAACGTTCAGCATATCACCGATC GTATACCCCGCAGAGGTCACGTCGCTCATTTTTTCCCTTCCCCTTTCCCG TTCCCTTCCGCCGTTCTCTTTCTCCGCCCCCCCCCCCCCCCACAGTACAT GGAACATCACGAGCTAGCGAAGTGGCAGCACCAAGCCCACAACACGAGCA TGATGACGTTCCTTCATAAGAATAAATAAGCATTTTATTCTTGTCATCTA CCATTGAGAGTAAGGCTAAATCTTATGGCACACCGATTTTGAGACACAGG TTTCCAAATCTCGTTGGGCCAAAATCGGTGGGCCCACAGGCTGACTGTGT CTTATGGGACACACCGTTTGGGACACCGTTTTTGATAATCAAGCGTATCG AGAGCCGCCTTTGCAGTCCATGTAAACAAACATACCATATCTAGTATTGG AATGGCGAAATAAAATTAAGAAACGCTGGTTCCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig738:123489..126422+

>mRNA_P-littoralis_Contig738.26.1 ID=mRNA_P-littoralis_Contig738.26.1|Name=mRNA_P-littoralis_Contig738.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1707bp|location=Sequence derived from alignment at P-littoralis_Contig738:123489..126422+ (Pylaiella littoralis U1_48)
ATGCCGTCGCTGGACCGCGACATCTCAGTTTGTGGGAAGGATAGAGTCGT
TAAACACACGTGGCAGAAGCACCCTCGCGGGTACAGTTTAACCTCGGTTC
TGCTGAAAGTGGGCTCCAAACGGCCTGCTGGTTCGGGAGTGGGCCCTACT
GTGGTTGATGATGAGTCGGGGCTGGACCTCGCTGGACGGGAGCATGCTGA
AACCCTCAAAACCCGAGCAGAACAACGAACGCGCAAGGCACCAGCAGCAG
CAGCAGCAGCAGCGCCTCCCGCCAAAAGGAGGCTTGGCGCAGACGCAGCG
CTCTCTCGCTCCTCGCCTCTGGCAACGGCGATCACGACCGGGTCCAAAAG
GGCAGGTCGGGCTAGTGAGGCAGAACAGCCACGAGTACAAACGGCGGAAG
AAAAGCACCGCGCTGATGTAGTAGAGATGGTGGAGAAGGACCCAGTGTTG
GCGGAAGAGATCAGGGAAGTGCTGCGGGAGTCGGAGCAGGAGCAGAGGCG
GGTAGATGCAGTCAATGCGGAGAACACTCGCTCTCTGGCCGCTTCTTTGG
CGTCGTTGCAGCTGAACTGCAAGAGCGAAACCGGCCGCATCGCGTACAAC
ACGGCGCTGGCGGTGGCCGCTGGAGCAGGGGAGCATACGTGCTCTCCTGA
CGACCCATGCGACCCCGCCGCGCGGTGCCCACCCGCTCAGCCAGCAAGTG
GAGTCAACTTGACCGAGCGAGCAGCGAGTCTCGGAGTGAGGGACAAAACT
TTCCGTGAGGCGCGCGCTCGGATGCACCATGTCGACCATTCCTTGGCTCC
CTCGGAGGCTGTGGAACAGGGGCGCTACTGCTGGGCGGAGCGTAAGACAC
GTTGTGACAAGACAGACACCCGTGTGCTGGACTTGGCCTACAGGTTTTGG
CACTCGGACGACGTCTCGCGTGGGTGTGGAGATTCAGGGACAAAAAACAT
GTGGAGACCTTCCAAGCAGACGGGGGAGGCGTACCATTCCAAGAGGCAGC
TCATGGTCTCGGGGGACGAGGTATTTCACAAGTTTCTGCGGTGGCCGCAG
TACCTGGCGCTCAGGGCGGACCTACTGCAGGAGGACAGCACCTTCCAAGA
CCCTGGTCGCACGACGTTCCTCTCCACGCGATGTGGATGTTTGGTGGAGC
CCGAGGTGTCGCAGTGTGCGTGCCAAATCCACACGCAGCAGTCGCAATAC
CTCGACGCCTTGGAGTTTTTGATGGGAGGCGTACACGGCAGGGATTGCGA
CTGTGCGTGCGACTGGTGTGATGGGGCGGGTTGTCAGAAGTGGACTGGCA
TGTGCAAAAATCTCCACAGCTTTTCAGAAGCGCTTGCTTGCGCGAAGGTA
AACTTGCTGGAGGGGGATCCGAGCGGTGGGGTCGAGCACTGGGCACGAAA
GCCGGCGTGCACTGCCGGATCGTGCGACGAGTGCGGGTTCGGGAATCCCA
ACGGCATCCCGACCGACTGCCAGGCTTTCGAGAAGCATTCCCACCGGCTG
GTAGGGTGGCTTAGGTTTGAGGACCAAACGATGGAGGATGGCACGGTGCA
CAAGAAGCAGCAAATACCGCAGACGGGGTCTTTGGGTACGCTGTGGAAAG
AGTTCATGGCGCACTCCCTGCTGTACATGGAACATCACGAGCTAGCGAAG
TGGCAGCACCAAGCCCACAACACGAGCATGATGACGTTCCTTCATAAGAA
TAAATAA
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