mRNA_P-littoralis_Contig738.19.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig738.19.2
Unique NamemRNA_P-littoralis_Contig738.19.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: D7FY31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY31_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 8.450e-146
Identity = 213/273 (78.02%), Postives = 238/273 (87.18%), Query Frame = 3 
Query:   78 MALMDALQLPESSGGMVVLGMTALGALMLIYLMYQPAPAXXXXXXXXXXXXXXXXRNFTIEQLHEFDGRDEATPSYVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADLDKSCSELNVMENDTLDGWVEKYKHYSGYPIIGKVVPPP-EPREFSLEELRPFDGTTETPEGHAAPPIYVGVKGKVYDMSYGGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVLQDWANKLAKKYPVVGTIADKAP 893
            M  MDALQLP+SSGGM +LG TALGAL+L+YLM+QPA A                RNFTIEQLHEFDGRDEATP+YVALRGEVFDVSSKPEHYK GGGYHLFAGHDASYSLA GSLDPADL+KS SELNVMEN++LDGWVEKYK++S YP++GKVV PP +PREFSLEELRPFDGT++ PEG+AAPPIYVGV+GKVYDMSYGG  MYGPGKSYNLFAGRDASVALAKMSFAPEHL+NPD S L ++DMTVLQDWA+K+ KKYPV+GTIA+ AP
Sbjct:    1 MVQMDALQLPDSSGGMAMLGFTALGALVLMYLMFQPARAPATDDDESAADRPPPPRNFTIEQLHEFDGRDEATPAYVALRGEVFDVSSKPEHYKVGGGYHLFAGHDASYSLATGSLDPADLEKSWSELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPREFSLEELRPFDGTSDIPEGYAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSKEDMTVLQDWASKMEKKYPVIGTIANSAP 273
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: A0A7S3Y4U5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U5_HETAK)

HSP 1 Score: 222 bits (565), Expect = 8.480e-64
Identity = 114/213 (53.52%), Postives = 146/213 (68.54%), Query Frame = 3 
Query:  243 RNFTIEQLHEFDGRDEATPSYVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADLDKSCSE-LNVMENDTLDGWVEKYKHYSGYPIIGKVVPPPEPREFSLEELRPFDGTTETPEGHAAPPIYVGVKGKVYDMSYGGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVLQDWAN--KLAKKYPVVG 872
            RNFT EQL ++DG +E  P YVALRG VFDVSS P HY K G Y+LFAGHDA+ +LA  S +  DL+K  +E  +V E D+LDGW   +K Y  YPI+G+VV PP+PR+ S EEL+   G    PEG+A  PI + VKG VYD+S+GG   Y  G +Y+LFAG+DAS ALAKMSF  E +N+ +   L E+++ VL DW N  K  KKYP++G
Sbjct:   65 RNFTFEQLKKYDGSEEDEPIYVALRGVVFDVSSAPTHYGKDGAYNLFAGHDATRNLAKMSFEEDDLNKPSTEGFSVSEIDSLDGWYTTFKEYKQYPIVGRVVEPPKPRKISREELQEMRGKQTCPEGYATAPICISVKGNVYDVSFGGVTFYMEGAAYHLFAGKDASRALAKMSFKDEDVNSTELKDLSEKELKVLDDWENTFKNRKKYPIIG 277
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: A0A836C9I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I0_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.600e-57
Identity = 117/222 (52.70%), Postives = 146/222 (65.77%), Query Frame = 3 
Query:  243 RNFTIEQLHEFDG------RDEATPSYVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADLDK-SCSELNVMENDTLDGWVEKYKHYSGYPIIGKVV--PPPEPRE-FSLEELRPFDGTTETPEGHAAPPIYVGVKGKVYDMSYGGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVLQDWANKLAKK-YPVVGT 875
            RNFT+EQL  F G       DE  P YVALRGEVFDVS     Y K G YH+FAGHDAS SLA  SLD +DL+K +  EL+  E DTLDGW+++++ Y GYP++G+VV  P P+P   ++ E+L    G    P+G AA P+ V V GKV+D+SYGG   YG G  YNLF GRDAS ALAKMSF  E+L+NP  + L   ++ V+ DWA +  KK Y VVGT
Sbjct:   61 RNFTLEQLKAFTGVNAKGEDDEDVPIYVALRGEVFDVSQARHAYGKEGNYHIFAGHDASVSLARHSLDASDLNKMTWEELSHGERDTLDGWIQQFRDYKGYPMVGRVVTAPLPDPLPVYTKEQLAAGTGEGPIPDGAAAAPMLVAVAGKVFDVSYGGAPHYGKGCPYNLFVGRDASRALAKMSFDAENLDNPSIADLSLAEVGVMNDWAARFEKKGYRVVGT 282
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: A0A7S2G6E6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G6E6_9STRA)

HSP 1 Score: 192 bits (489), Expect = 7.120e-53
Identity = 103/222 (46.40%), Postives = 138/222 (62.16%), Query Frame = 3 
Query:  243 RNFTIEQLHEFDGRDEATPS-------YVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADL-DKSCSELNVMENDTLDGWVEKYKHYSGYPIIGKVVPPPEPREFSLEELRPFDGTTETPEGHAAPPIYVGVKGKVYDMSYGGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVLQDWANKLAKK--YPVVGTI 878
            RNF+  QL E+DG D+A          Y+ ++GEV+DVSS  E Y   G Y LFAG DAS  LA  S +   L +   S  + +E D L+ WV K+K+   YP++G++V P      ++EEL  F GT E PEGH  PP+YVGV  KVYD+S+GG  MY  G +Y+LFAG+D S ALAKMSF PE +N+ + S L +Q+  +++DWA K   K  YPVVG +
Sbjct:   55 RNFSAAQLREYDGNDDADKFDSKAGKIYICIKGEVYDVSSAAEFYGADGPYALFAGRDASRCLATLSFEEEALANPDISTCSSLEIDQLEDWVNKFKYIKCYPVVGRLVTPARRGPITVEELANFKGTQEVPEGHCDPPLYVGVNKKVYDVSFGGFDMYKEGATYHLFAGKDVSRALAKMSFKPEDVNSREVSDLSDQEQKIMEDWAQKFEHKKLYPVVGDL 276
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: W7TR10_9STRA (Heme steroid binding domain-containing n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR10_9STRA)

HSP 1 Score: 190 bits (482), Expect = 8.060e-52
Identity = 103/224 (45.98%), Postives = 136/224 (60.71%), Query Frame = 3 
Query:  243 RNFTIEQLHEFDGRDEATPSYVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADLDK-SCSELNVMENDTLDGWVEKYKHYSGYPIIGKVVPPPEPREFSLEEL------RPFDGTTET-PEGHAAPPIYVGVKGKVYDMSYGGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVLQDWANKL--AKKYPVVGTIAD 884
            RNFT  QL EF G  E  P YVAL+G+V+DVSS  + Y   G Y  FAGHD + + AL SL+  DLD  +  +L   + ++L GWVEKYK+Y  YP++G++V PP     +L E+       P +G  +T PEG AAPPIYV V GKV+DMS+GG   YGPG  Y+  AG+D S  LAKMSF      + + S L ++    L++W  K    +KYPVVG + D
Sbjct:   59 RNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID 282
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: A0A8J2SX87_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SX87_9STRA)

HSP 1 Score: 195 bits (495), Expect = 8.030e-51
Identity = 105/217 (48.39%), Postives = 133/217 (61.29%), Query Frame = 3 
Query:  243 RNFTIEQLHEFDGRDEATPSYVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADLDKSCSELNVMENDTLDGWVEKYKHYSGYPIIGKVVPPPEPREFSLEEL-RPFDGTTETPEGHAAPPIYVGVKGKVYDMSYGGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNN--PDTSALDEQDMTVLQDWANKLAKKYPVVGTIAD 884
            R+FT +QL EFDG+DE TP YVA++G+VFDVS     Y  GGGY LFAG DAS  LA  SL+  DLD+    LN  E + LD W  K+K   GYPI+G++  PP  +  S  EL     GT     G       +GV+G VYD+ YGG   YG G SY+LF G+DAS ALAKMSF PE ++   PD   LDE+++ +L DW    A+KYPVV  + +
Sbjct:   68 RDFTPKQLREFDGKDEDTPLYVAVKGDVFDVSEARSFYGPGGGYALFAGRDASKCLATMSLEEVDLDQPIDGLNHGEREHLDEWHFKFKELKGYPILGRLATPPSTKVISRAELLERGTGTCAPSPGRCCAEHLIGVRGNVYDVGYGGVGFYGAGCSYHLFCGKDASRALAKMSFKPEDVDRGWPDLGDLDEKEVKILDDWEKLFARKYPVVARLRE 284
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: A0A7S2R951_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R951_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.270e-49
Identity = 100/224 (44.64%), Postives = 134/224 (59.82%), Query Frame = 3 
Query:  243 RNFTIEQLHEFDGR----DEATPSYVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADLDK--SCSELNVMENDTLDGWVEKYKHYSGYPIIGKVVP----PPEPREFSLEELRPFDGTTETPEGHAAPPIYVGVKGKVYDMSYGGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVLQDWANKLAKK--YPVVGTI 878
            RNFT++QL + DG+    D+ TP Y++L   VFDVS   + Y  GG Y LFAG +   +LA  S D   LD    C +L+  E + LD W+ K++HY  YPI+G +VP    P   +  + E++  FDG  E P+G+A  PIYVGV  KVYD S+GG   YG G SY  FAG+DAS ALAKMSF P+   N     L+E ++ ++ DWA    +K  YP+VG I
Sbjct:   60 RNFTVKQLSKKDGKKDPDDQDTPVYLSLNRIVFDVSKGRDFYGPGGPYELFAGRECGVALAKMSFDETYLDDIAGCDKLDFGEKEELDNWLAKFEHYRSYPIMGNLVPDCDLPQSDKVLTKEDIAKFDGKGEVPDGYATAPIYVGVGEKVYDASFGGVTFYGKGCSYERFAGKDASRALAKMSFDPKDTENTAVDDLNENEIKIMNDWAKTYEEKKGYPIVGVI 283
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: A0A7S1XXM8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXM8_9STRA)

HSP 1 Score: 179 bits (455), Expect = 4.310e-48
Identity = 94/216 (43.52%), Postives = 134/216 (62.04%), Query Frame = 3 
Query:  243 RNFTIEQLHEFDGRDEATPSYVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADLDKS-CSELNVMENDTLDGWVEKYKHYSGYPIIGKVVPPPEPREFSLEELRPFDGTTETPEGHAAPPIYVGVKGKVYDMSYGG-GAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVLQDWANKLAKKYPVVGTIAD 884
            RNFT+EQL  +   D+    ++A++GEVFDVS+K E Y  GG Y    G +AS +LA  +L+  DL+ +   +LN  E + LDGW EK+KH + YP+ G+VV PP  + F+  +LR + GT   PEG+AA P+Y+ V+ ++YD+S+G    MY PG  Y   AGRD + AL KMS   E + + D S   +    +L DWA K A++YP VGT+ D
Sbjct:   58 RNFTLEQLKAYRSEDDGG-IFIAIKGEVFDVSAKAELYGPGGNYEALTGREASRALAKFALEGPDLESTKIDDLNYGEREQLDGWYEKFKHVNEYPVRGRVVTPPGEKLFTEAQLRAYTGTQAVPEGYAAAPLYIAVRRRIYDVSFGNLTEMYLPGGPYAKLAGRDGNRALGKMSLKEEDMFSRDISDFTDDQNQILDDWAAKFAQRYPCVGTLKD 272
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: A0A6G0XDJ4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDJ4_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.170e-47
Identity = 95/213 (44.60%), Postives = 133/213 (62.44%), Query Frame = 3 
Query:  243 RNFTIEQLHEFDGRDEATPSYVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADLDKS-CSELNVMENDTLDGWVEKYKHYSGYPIIGKVVPPPEPREFSLEELRPFDGTTETPEGHAAPPIYVGVKGKVYDMSYGGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVLQDWANKLAKKYPVVGTI 878
            R FT+E+L  F+G ++  P Y+A++G V+DVS K + Y  G GYHLFAG +A+ +LA  S +PADLD +  S+L+ ME + L  W+EK+  Y+ YPI+G+V+   E ++ +LEEL  +             PIYV ++G +YD+S GG   YGP   Y +FAGRDA+ ALA MSF   HL NP T  L E+ +  L DW +K   KY VVG +
Sbjct:   50 RYFTLEELRVFNGENDK-PIYIAIKGIVYDVSRKRDFYGPGEGYHLFAGREAARALAKMSFEPADLDNTDISDLSFMEKEILKDWIEKFTDYNSYPIVGRVL---EKKDLTLEELSKY----------TTLPIYVAIRGVIYDVSIGGINHYGPKGGYKMFAGRDATRALAIMSFDEAHLANPTTDGLTEEQLKTLADWESKFQSKYGVVGKV 248
[Close]
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Match: B8BQ80_THAPS (Steroid binding protein 1 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ80_THAPS)

HSP 1 Score: 177 bits (449), Expect = 1.990e-47
Identity = 105/231 (45.45%), Postives = 134/231 (58.01%), Query Frame = 3 
Query:  243 RNFTIEQLHEFDGR-----DEATPSYVALRGEVFDVSSKPEHYKKGGGYHLFAGHDASYSLALGSLDPADLDK--SCSELNVMENDTLDGWVEKYKHYSGYPIIGKVVP----PPEPREFSLEELRPFDGTTE-TP-----EGHAAPPIYVGVKGKVYDMSYGGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVLQDWANKLA--KKYPVVGTI 878
            RNFT++QL  FDG      DE  P Y++L G VFDVS     Y  GG Y +FAG +   +LA  S D + LD   +C  L V +   L+ W+EK++HY  YPI+GK++P    P   R  S EEL  FDG  E TP     +G+   PIY+G   KV+D+S+GG  MYG    YN FAG+DAS ALA MSF P    NPD S L+E+ + VL DW  K    K YP+VG +
Sbjct:   23 RNFTVKQLRHFDGTKEEQLDEDKPVYLSLGGTVFDVSKGRSFYGPGGPYEVFAGRECGAALAKMSFDESLLDDIAACETLGVGDKTELENWLEKFEHYRCYPIMGKLIPDDKLPSPDRVISKEELAKFDGQKEGTPTEDELKGYGTYPIYLGAYDKVFDVSFGGVPMYGKDGPYNRFAGKDASRALALMSFDPNDAANPDISDLEEKQVKVLHDWVKKFEENKGYPIVGRL 253
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig738.19.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY31_ECTSI8.450e-14678.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y4U5_HETAK8.480e-6453.52Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836C9I0_9STRA1.600e-5752.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2G6E6_9STRA7.120e-5346.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TR10_9STRA8.060e-5245.98Heme steroid binding domain-containing n=2 Tax=Mon... [more]
A0A8J2SX87_9STRA8.030e-5148.39Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2R951_9STRA3.270e-4944.64Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1XXM8_9STRA4.310e-4843.52Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6G0XDJ4_9STRA1.170e-4744.60Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
B8BQ80_THAPS1.990e-4745.45Steroid binding protein 1 n=1 Tax=Thalassiosira ps... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig738contigP-littoralis_Contig738:91744..102381 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FY31
PFAMsCyt-b5
Model size1988
Max annot lvl2759|Eukaryota
KEGG koko:K17278
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005488,GO:0005496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008047,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008289,GO:0008610,GO:0009058,GO:0009889,GO:0009987,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0019216,GO:0019218,GO:0019222,GO:0020037,GO:0030234,GO:0031323,GO:0031326,GO:0031984,GO:0032443,GO:0042175,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044093,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0046890,GO:0046906,GO:0048037,GO:0050789,GO:0050790,GO:0050794,GO:0050810,GO:0062012,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0097159,GO:0097384,GO:0098772,GO:0098827,GO:0106118,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
Exons7
Evalue5.76e-152
EggNOG OGsKOG1110@1|root,KOG1110@2759|Eukaryota
Ec32 ortholog descriptionCytochrome b5-like heme/steroid binding domain
Ec32 orthologEc-27_006910.1
Descriptionsteroid binding
Cds size819
COG categoryCH
BRITEko00000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig738.19.2prot_P-littoralis_Contig738.19.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig738 92836..102304 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791524.8510997-UTR-P-littoralis_Contig738:91743..928351680791524.8510997-UTR-P-littoralis_Contig738:91743..92835Pylaiella littoralis U1_48UTRP-littoralis_Contig738 91744..92835 -
1680791524.950958-UTR-P-littoralis_Contig738:102304..1023811680791524.950958-UTR-P-littoralis_Contig738:102304..102381Pylaiella littoralis U1_48UTRP-littoralis_Contig738 102305..102381 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791524.8631694-CDS-P-littoralis_Contig738:92835..929761680791524.8631694-CDS-P-littoralis_Contig738:92835..92976Pylaiella littoralis U1_48CDSP-littoralis_Contig738 92836..92976 -
1680791524.8726816-CDS-P-littoralis_Contig738:94219..943151680791524.8726816-CDS-P-littoralis_Contig738:94219..94315Pylaiella littoralis U1_48CDSP-littoralis_Contig738 94220..94315 -
1680791524.8824377-CDS-P-littoralis_Contig738:94793..949131680791524.8824377-CDS-P-littoralis_Contig738:94793..94913Pylaiella littoralis U1_48CDSP-littoralis_Contig738 94794..94913 -
1680791524.894391-CDS-P-littoralis_Contig738:95593..956841680791524.894391-CDS-P-littoralis_Contig738:95593..95684Pylaiella littoralis U1_48CDSP-littoralis_Contig738 95594..95684 -
1680791524.91234-CDS-P-littoralis_Contig738:96094..962731680791524.91234-CDS-P-littoralis_Contig738:96094..96273Pylaiella littoralis U1_48CDSP-littoralis_Contig738 96095..96273 -
1680791524.926288-CDS-P-littoralis_Contig738:96549..967111680791524.926288-CDS-P-littoralis_Contig738:96549..96711Pylaiella littoralis U1_48CDSP-littoralis_Contig738 96550..96711 -
1680791524.9362068-CDS-P-littoralis_Contig738:102274..1023041680791524.9362068-CDS-P-littoralis_Contig738:102274..102304Pylaiella littoralis U1_48CDSP-littoralis_Contig738 102275..102304 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig738.19.2

>prot_P-littoralis_Contig738.19.2 ID=prot_P-littoralis_Contig738.19.2|Name=mRNA_P-littoralis_Contig738.19.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=273bp
MALMDALQLPESSGGMVVLGMTALGALMLIYLMYQPAPAAAAADDDDSPD
PPPPPRNFTIEQLHEFDGRDEATPSYVALRGEVFDVSSKPEHYKKGGGYH
LFAGHDASYSLALGSLDPADLDKSCSELNVMENDTLDGWVEKYKHYSGYP
IIGKVVPPPEPREFSLEELRPFDGTTETPEGHAAPPIYVGVKGKVYDMSY
GGGAMYGPGKSYNLFAGRDASVALAKMSFAPEHLNNPDTSALDEQDMTVL
QDWANKLAKKYPVVGTIADKAP*
back to top

mRNA from alignment at P-littoralis_Contig738:91744..102381-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig738.19.2 ID=mRNA_P-littoralis_Contig738.19.2|Name=mRNA_P-littoralis_Contig738.19.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10638bp|location=Sequence derived from alignment at P-littoralis_Contig738:91744..102381- (Pylaiella littoralis U1_48)
CGCCGATATCGCTCCCCTCGCAATCCCCCCGCCCGGCACCGGGCACACCC
GACGTCCGCTGTTCCTGGGTGACGGCGATGGCTTTGATGGACGCGCTTCA
GCTCCCGGTACGTCTCGAAAAAAAAGAAGGATCTTACTGTCTTTTGTGAC
AAAAGTGCAAAGAAATGGAACGTTCAGAGGCCAGCAGCAAAGCAGCAAAG
GGCAAATGGCAAATTGTGAATGGAATGTACAGCACTGCCGTGTGTTGCCT
TTTCTTTCCTTTTTCCTTCGAGTATCATATCATACAACGCAACACGCATC
TCCTCGGGTCCTCGTCGTCTCTCTCGCCATCTACTTTAGTCCTCGACGAG
TTTCTGTCTTGCGTTGGGTACAACAATGCTGCAGCAAAGAGATCTTGCCT
AGGAATGATATGCACTGTTCCATGAGCTGCACATGGCCGGCCCGTATTTT
AAGTGAGCACTGAGATGCTGCTGTGGATGTGACGACCAAAATCCTTCTTC
GAAGTATACCATGTCTGGACACTTGAGAGGAGTATACCGGTATACCACAG
CCGCTACCGAGCTTCACCTTACTGCTGTATACTGCTGTACCCTGGTAGCA
CACGCTGCTTTGCTTCCGTAACAAGCGTACGTCCATTACTTCAGACCAAT
CGACTTCCTGTTTGTGCGCCTGCAACTCCTTTCGTTTCATACGCCAGTGA
GTGAATTGCTGTTCAGGGTGGCTCTTGTCCCCGCGGAATGCCCAAATCTA
AAATCTAAAATCAAAATCTATATTAGGCTACTTTTTATGTGTCGAATCTG
ATTATCAAAAGTGATTCGTTTTCGATATTTGGCACAGATCCGGCATGTTA
TGTGATCAGAAATGGGCCATTTTTGATAAAAACATTTTCAATAATCATTT
TTGATCCAGCACCAGCTCAGAAATGAGCCTCATTTCTGATCTACTCCGCA
TATCAAAAATGATTATTGAAAACGTTTGAGACTCCGACGCAAGCCATCAC
ACAACACAAGGACCCACAGCAGCAGCAGTAGTAGCAGTACTGCCACATCA
CTACTGCTGCTGCTGCTGCTACATTATCGCGGGCGGTCAGCGTGTTACTT
CCTCGTCGTCGCCCGCCAGCAGCGTAGCCCTTCATCCCATGGCGGCAGCA
GCAGAGAGCGACTGATTGCGTTTCACCTACAAGCACTCGTACACTGCTGT
GCAGATAGATGCCCTGCATATATATGAATCATCAGCTGTAGTAGTCTATA
CTTGTTCTTGCTACGAATAGCCTCCCAAAAAAAGCTTGAAATAAATAGGT
CTGGGTGTACTCCGAGTAGTTGAGCGGGAGGGACAACACCTTGTTGTCTA
GATGTATGGTTTACGCGCGGTGCTGCTCTGTTCTGGCTGTGACCCAGCGC
GTCGTGCTCCATCCCGAGAGGGTGCTGCGCTCGCTCCAAATTTTTGAAAT
GTGCTACTACTGCTGTATACTACCCAAACGGCTCTTCTTGGGATCCTACA
TATACGATACGTACTGCTGTACGAAAAATACGTTTTTGATATTGATAAAT
TGTTTATTTTACACATAACATCTGATGTTGATACCACACTGCGGGAATTG
TCAATATCGAAAACGAATCAGAAATGATATTTTGATATTTGACACATAAA
AAGTAGCCTTAGATCACATGTGCTGCTGCCTACGAATAGAAAAATCGCCA
TTTTTTTTTTTATAGCGACAAAAGTTGTCATTGCACGGAGCCCCCAACCC
CGATTTTCCTGTGACACATCTCTCATGATCAGCTGGTTCGCCAGGTGTAG
TGCTGATCCCGAATCATGCCAACATTTTTTGAGGGGTGCATCGACCAAGC
TACACACTCCGTGAGTTTCAGCCCATTTGGGTTTTCTTCCAGGTCACAAC
CTTGATCTAAAGTTTTTTTGGAGCACCAAACGATGAAATTTTGGCTAAAG
TTTTGGAGGTAGACATTTTGTTGTTCTCGTTTAAGGAATGTTCAACCTGT
AACCACTGGAGTTTAGACTGGTTTTGGTCGATTTTAGGCAACTTTTGCAA
GCTCATTGTCAGCGCTGTGGTGCCGATCCCAAATTTCGCCAACTTTTTTT
GGGTAGTACACCGACCGTGTACACCCTGCGAGTTTCAGCCCATTTGGTTG
TTCTACCAGGTCACAACCTTGGCGCAAAGTTTGTCGCCCGAGAACTTAAA
ACGAGCTCCAGACGCACAGAAAAACGGCTTGCTTCCAGTTGCGATGTCGC
AGCATATCTGCAGTTTGGAGCAAAACCATAGCATATAAGCTATTGGAGAA
GGTAGAACACGACCCTATTGAGACCTCCTGTCAACATCGTAGCAAGCCGG
GGTCTGTGTGAGGAGTACTGCCGGCGACAAAGGTCATGACCCTGAATGGT
GTTCGCAGCACAAATTTACAAATCTGAGAGGGGCTCAGGGTTTCGTCAAG
TGGTACCCGCCCAAAGCTTTTGTCGGTATTAAAAAAAAAAAACACCCAAA
GCAGCACAGGTGAGATTTTGATTTTAGAAATGGGGTTGGGTCCACGCAGC
TGCAGCTGCGTTCATCTCAAATCTAAAAAGCGGAGGTACAATAAAAAAAA
TAAAAGGAAGAGGAACGACCAGCAAGTCAGAGGACAGACGGTCGTGGAAT
GCATGCAGCGATGATTGTTAAGCTAGTGCGGGAGCTACCATGCCTCCAAC
GCAGTGCACGATAGTGCCCTTAATCGGCCTGACTCAGGCGCGCTGGTTGT
CCTTAGTTTGAGATCGATAACCGAAAAAACCATGAAGAAATGTGTGTTTG
ATTGCGTGTTGCACACCAGCATACCAGCATACCCTACATACCCCTGCTGA
CCATTTTCAGAGAGTCAACGAAGCCCACGCATTCAGCCGTTGTTGTACAT
ATTCTCTGCAGAGCGACACCAGCTATGTTACTCTGATGAGCTCGTCAGCA
TCTCGGCAGACACCCCTCAGACAGAGTTCCCTTCTTTGCAGTTGGCATTA
CCATCTTCGTGTGGAGGTATCGTTTGTGTACAACAGGCAGCTACAAGAAG
TTGTGTTGTGAGTAAAAGCATACAGTTGTTGAAATCGAAATGCACAGCAG
CACCACGTGTGTATATACTAGTATGAGAGTCGTGAGAAACAACAGGAGCC
GCTGCTGTCTGCACACTTCTGCACCCTTGAGTGGTGCTTTCCGGAATATT
ATCGCAATCCGCTGAAACAAAGTGAACTGTATTTTACGGGACATTAGCCT
TCTGCCGAGGTCACACATACGTACAACAGGGGGATACAAGTTGGGCTGTG
ACCAACGAAACAAAGACACATCGATGTGCACCGATGTGCTCCCAGGAAGC
ACAGCAAACACCTCTCTGCTCGTGTTCTAGGTCTATTCGATTTTTGAGCC
GCATTTTAGATTATGAACTCGGATTTTTTCGATTTTACCCTTTCCTTTGG
CTTTCGGAATAATAAGGGCGAAATCGAAAATCTGCTGGATGCGCCGCATG
TGCGGAGGGAATTTTGGCCAACCAGCAGTTTTTTAGATTTCGATTTTCGA
TTTCGATCGGGTTTTTTCCGGGGACAAGAGCCACCCTCAACTGGCGTGTG
CTCGCCCTGCTGTCCTCCTCACGGTTCATTCCTTCTTCGTATATTTCCAA
CCCGCCTGTTGCCTCCAGCAAAGTGCTCGTTTTTTTGTCGCTTGTCTTGG
TCTCAACAGGAAAATTCCGATTTTGTTTTTTTTATGCACTCAAGAAAAAA
TTATGGAATCACAACTCATTGAGATATCTCCGTTGGTTGGGTGCATTCCG
ATCCCGTTATTGGAGGTCTAGAGCTGCTGCTATTGCCTGAAACAAGGCAG
CTCGAACGGCACCTGGCATCCCTCCGCGTTGGATTCGAGGCAACGTGTCA
ATCCTCCTGGAATAGTGCAGATCCCTAATTCGGCAGACTTGGAATAGGAC
AGCTAGCCTGTTTCCTACAGCGTGGCAAAGTACCAGAGTTGTTCGTAGCT
TCTTGCACTGGGGCCTTAGCGCCGAAGTTCGTGTAGGTTTGGTTCCAGGC
TAAAATGGATCCAATATCCAATACACTTATCAAATCATATATCATATCAT
ACGTGTACGTATGGTATATATGATGTACACAAGATCTGTACTACAGCAGT
AGACCACAGCTCTCAACCCTCTCTGTAGCCAAGTAGATGCGGAGGGATGA
GCGCGATTTCGGCCATTTTGAACCGTGTTGCAATCGTCGTTTTCTACCGC
TGTAGTACAGATCCCTAACTCGGCACCCCTCCACGTCCATCTATCCTTAT
GTCAGCCAACACTGCCAAAGTTTGGCCGTGTTTGGTCAAGTATTGCTCTG
GGGCCTTTGGCGCAAAGATTGCCCTGAAGCCTTGGGGTGCAACTGCCGTG
GTGTTGACGTGACCTCCCAACTCCGCACCGGCAGCGCAACCAATGTCAGC
CCTACCATCAATCTCAGCGCCCGCAAATCACACAACGGCCGAGATAATGA
CTCTCGCTCTAGCCCTTCCGCTTATTTCGCGCTGGTTCCTGCCCTCGGCG
CAGAGCTTGGTGGTTGTGGTGGTGGTTACTGTGCAGGCCTCTCGCGATTA
CCGGCGGGTTTCACAGGGGGTGGCTGAAAAATTGTACTACCCGCGAAAAC
ATGCCTGCTATTTTGAAGACATTTGTTTTTCAATTCCTACAGGGACCAAC
ACATGTGTGTGGCCGATTCGAAGGACGGCAGCACGTCATGAAGGGCAAAT
GACAAATGGAGACACGCTGCTCGCTGCCGTACCGCATGGCACACGCCTCT
GCAGCAGCGCTCTTTGATCCATAGCATGCCTTCCACCCATCCACCGATAC
ACGCACAAAGTCTGCGACACAGCACGAAAATGGTCAATCGAAGCACCGTC
CTCGCCAGTTGCTACTCGTAGGGCACTGACTGCTTTTGTCTCGTGCGTGG
ATTTTGGATGAAAAGCAGTTTAAAGCAGTACAGTTTCCTAACCATGCGTG
AACCGATTATGATTGGTAAAAACGGGCTACTTTTTGGGTTGATTTCCCCA
ACCCGAAGGTCCACTCGTTCCTATTTTTCTACATTTCTCGCCCGTGCCAC
GACCAAAACGCGCGCTGGAAGCTTCCCTTGACTAGTCCAAGGTGTTGCGT
CCTAGCAGTCCCCCGTGGGTTGGTATTGGGGTTACCGGTAGGGTTAGGGT
TAGGGTAAGCGTTATTTGTAGACCCTTAAGATCCATGCGCACGATCAGTG
ACCCGATCTCGTTGAAAGGGCGAGAGGGTGAACATGACCATTAATTTCGA
GCACCGGTACAGCAGTATCATATCACAACAAGGTGATTACGATGTTCAAA
ACCAGGTGCTTCGTACCTTCTTGCGTTCGTACGATGAACCTTCGATAGGG
AGACGCTTTAAAGTTGCAATAGGATAAACTGCAAAGTATGATGTGATGCT
ATCCGTGCACAGGAATCTCAAATTGCCAGAACAAAAAATGACAGGTACAA
TATGATGTGATATTATCCGTTTACAGCAATCTCAAAAATCGCCAAAAAAG
CGACATATGACACTTTTTGTAGTTTGGTTTGAAGCTATCCGCGAACAGCA
ATCTTCAAATCGCCACAATACAGAATAAATGACAGCAGTGATAATATGAC
GTGAAACTATCCGTGCACAGGAATCTTCCGGGGGCATGGTTGTGTTGGGG
ATGACTGCCCTAGGCGCGCTGATGCTGATATACCTCATGTACCAGCCCGC
ACCGGCAGCGGCAGCTGCCGACGACGATGATTCCCCGGATCCCCCGCCGC
CGCCGAGGAATTTCACCATCGAACAATTGCACGTGAGTTGAGAATTACAC
CGCGATCATCGGTTTGTTGCTCTTTTTCGATTTTCTTTGTGTTTCGGTTG
AGGCCACGTGGCCGCATTGCGTGCAGCATGCATTTGCGGAGGTTGGAACT
CCTCTACAGCTGCTGGAGCCTCGGTGAGTGAGAACTGTTCTGGCAATCGG
TTTGATGCAGCGTGTTTATTCTTGATTCTAATCGACCAAATATGCATGCA
AAAAGTGAATAATGTTTATCTTGTTTTTCCTTCTTGGTCTTTTTTTCGAT
GTCGTCAGGAGTTTGACGGGCGAGACGAGGCGACGCCCTCCTACGTTGCC
CTTCGAGGGGAGGTTTTTGACGTGAGCTCGAAGCCAGAGCACTACAAGAA
GGGCGGCGGATACCACCTCTTCGCGGGGCACGATGCCTCCTACAGCCTCG
CCTTGGGCTCCCTCGATCCAGCAGATCTAGACAAGAGGTCAGCATTGTTC
GTGCGCGATGCAATGAGGGGGGCGGGCGGGGGGGGTTGGGGAGAAGATGG
CGTCAGGTTGTATATCCGTCTCTACTTTCGCTCTTTTGCCCGGAGTAATG
GAGTACATCCCTTTGTAGTTTTATCTTACTTTACCGTCGTTATTATCGTC
TTCAGCCTCGCCACGTACTCGCGCTGCAACACATCCGGTCGATGTAGAGA
GCTATGTCAGACTGTACCCCACTGGCGCTGCACCGTGAGCCGTGCGTCAC
ACATATTTCGTGCTTTTCACCCCTCCGCTAGGTAACTTAACTCACCTTGG
CTACCAATATTTCATGTTTGTCTCGCTTTTCTTCGCATCGTTTCGTTTTT
CGGACATGCTTTCACTCTCTGTCAATTCTGGACGATGCTGGTTGCAGTTG
CTCGGAGCTAAACGTGATGGAGAACGACACCTTGGACGGGTGGGTGGAGA
AGTACAAGCATTACTCCGGGTACCCCATCATCGGGAAGGTATGCACCCAT
CCATCGCTCCATCCCCCCTTGGTCTCTCTAGATCCCGTCCCTCGGCTAGT
TCCTGGGCAGTGTTGTTCGCTGATTCGCTTGTGCTCTCTCGTCGGCTCTA
TGGGAGCAACTCGCAGGTGAAGTCCCGCTTCTCTCTCTCTCTGACACGAA
TGTAGCACAGCAGAGCCGTTTGTCCAGTGTGCATAATCGCCATTCTGTCG
GCGCTCTCTCTCTCTAGTCCATCTTTCACAGCGAATGCGAGGGAGCTCAT
GCTGTTGCTCTTTCTCTCTCTCTCTCTACTCCTGCTGCTGTCTCCGCACT
TACTTCATGGATTCCCCACGCCTTGCTTCTTTCTCTGGCATCACTTCTCG
CTCCGCGGGACCCCTCCTTTGTTGGCAACTTGAGGCTGGTCAAGCTTGGT
TGATCTCGCTGGTACGCATAGGGTTGCTCCGTTTGTCTTTTGCGGCGGGC
TTCTGGGGCTCTCCTAAGGCCCTTGGGTATGTCGACCCAATCCCGTTGCG
ACATCTCCGCAAGTTTAACCCCCAACTGCTCTTTGCCGTCAGAGCTCTCG
ATAGTCACTGCTTTGTTTGTACAGTCCCTTTGGTACATTGCGTTCCTCGA
AACGTTCAAAGGGTAGGTGTACTCAGATGGCATGCGTGTTTGATGGGTGG
CGGTTCTGATGGATGCAGGTCGTGCCGCCTCCGGAGCCGCGAGAATTTTC
TTTGGAAGAGCTGCGGCCGTTCGACGGGACGACTGAAACTCCCGAAGGTC
ACGCCGCGCCTCCCATCTACGTGGGCGTGAAGGGCAAGGTGGGCGAGGAA
GATCCTTGTGGGCGATTATACAGGCGTGAGACGCGTTTATGACTAGGAAG
CGTGTCTTTTCAAAAAACGCTTTTGTCATCCATCTGTTCCGCACGCCAAC
AGTACGTACGTTCGTTCATTGTCTCGCTTTCGAAACAACGCCCGCACCGC
CCGAAAACGCCATGCATCATATTGAAAACTTTCCCCCCGAGACTCTTTGC
GCCGGGTTGGAGATGCGCGTTTGAGTCGTTAGCCATGTCAGCGTGCCTTG
CAGTCCGTCACTGCATGGTTCGAGTGTCGGAAAAAACGAACCAATCGTTC
GTGTTGACTCCTTAGATTGAATCCGCACCCTTCCTCCTGCAGTAGGTGAA
GCAGGTCAGCCTATCGCTATCCCTTGTCACAGTTAAGTTAGCCTGTTCCA
TGCCTTGGTGAGCTGAAACGTGCTATGGGCATGAACTCCATCTCAACCCG
TTTCCCCGGCGTAAAGGTGTATGACATGTCGTACGGAGGAGGGGCCATGT
ACGGGCCTGGGAAGTCGTACAATCTCTTCGCCGGGAGGGACGCATCCGTC
GCTTTGGCCAAGGTCAGTCTTAGGCTCGGCTGGTGCCACCAGCAGAACAA
GTGTTCATCGGAGCTCAGCCCTGTTCAGAAAAACTAAACATATACTTCCT
CTGTATCATAAGTCTGGGCTGTTATGGGCGTGTAATTGTTTGCGCATCCA
TACTGTTTCGATCATCCTATAGTTAGGTTCGTTCGAAAGATGAAGTCTCA
AAGAAGCTGATGCAAAAAAAAAAAAAAAGCCAGTTGTTTATACTAGAATG
AAGTCAAAATATGCCCATTTTGGCCCATTTACAGAATTTTGATTCCGCCA
GATGTCTTGGTTTTAGAGCATGAGTCCCAAGTATCTTCGTTTTAGTGTGG
CAAACCCAAGTGTCTTGGTTTTAGCGTCGCGTCACTATTATACTGATTTT
AGTAAGGAGGGACTCGACATGAATCTTTGAGGTAGGGGGGCTAGGTTCAG
GGTTAGGGATAATTTTGGGGGGGATTGCATTGTTTTTTTTTTTGCCCCCG
CCCCCCACTCCACCTCTGGAAAGGGTTAAATACGGCCATTTTTGGCCTGA
CTACTTTTTTGTTAGCCGCTAGCCCATGCGCAGGGTAGTGCGCAAGAAAA
TATATATATATGTGTTTCAACCCAAAAAACTCCGAAGATTTCGAAAAAAT
TATCGCCGAAGACATCGGACACCGTTGAGGGGGCGTAAAAACATAACGGC
ACAGACTTATGATACAGAGGAAGTATTCACGGTTTCGCGTAATAATCACG
TAATCATGATTGGGGGGGGTAGTGAAATTTGCCGTCAAGAAAGAGACAAA
AACACCCTTCACCGTCCATCACCCGCCGTGACTGGTATGGCTTCTGGTCC
AGTAGAGCATGTGTGTTGGATCAAGCCGCATCTACAGGCTTTTGTCAGCC
TTTTTCTTTTTTCTGTGTTTGCTTGTGAAGGTTTTTTGTTTTTGCTGAAT
CCCGCTTTACAACTGCAAGAGCAGTACTGGTACATTACATTCACGCTTTG
ATACCATGGAAGGAGGCGGTTAAGGGTAGTCTCCGTTCCGCCAATCGTGC
GTGAGTGTGATGAAGCAATACGTGCGTATCATAGCTGTAAGTCTCGCATG
GGCTGATGAAGTTAGAATTTACCCTCCTCCCTCCCTCCCTGCCTCCACAG
CCACTGCCACCCCCCTTACCCCCGCACCTCATCCTTGTGTTCATTGCCCA
ATCTTTGCTCAATCTCGTTATACCTTCGCTCGAATTTGTGGCGACGCGCG
AGCAGATGTCGTTTGCCCCTGAACACCTCAACAACCCAGACACGAGCGCC
TTAGATGAGCAAGACATGACGGTGCTCCAAGACTGGGCAAACAAGCTGGC
CAAGAAATACCCGGTCGTCGGCACCATTGCCGATAAGGCGCCCTAGCGTT
AGCTCCACGGTTAGGGTTTGGGAGACGCGGCTCAAGTCCCACGCGCCTCT
CATCTCAATCCAAGTCCCTTGTAAAATTGTACTTCGAAGTAGTGGAATTC
ATGTATCGTCGTTGGGTTGTTCATTTCTCGTCACAAGGTATTTTGAAAAC
GGTTTTCGTGAGTGTGCTGTTGTCCTGTTCATATGAATAAGTTATAAAGG
CAGCATATTATTGGCTGCAAGGTGTGGGGCGGAGGATACGTAGGGGTGTG
GATTTCGACGCTGAGGAAATGTGGGAGTACCGTATTTTTTAGGGAAGATG
CTCGGGAAAGAGTGAAGGAGTTTGCCCGATGGACTGCTGGCAAGGTTAGG
TTTTGCGCCGGTAGTGGTAGGAAGGTCGATCCAAGGGTCGGGTCTACGTG
CTGCTGGTATTCCTTTGTTACTTTTTGCAATATACGGTGAAGAACACACC
TCGAATCCTCTCCGGTTCTCCTTATTATATTGCTCAACGCATTCCCAACA
CTCCAGATTGTATGATCGTTCTAATCTCGCGTCGGCAACATGTTCGTAAT
GGCCATGTTTGTTTGCGATTATCAGCGCGCCGAATGTACCGCCGAAATGC
GGCTACACGGTGATATACCAGGCAGGCTAGCACTAGGTATTTTGGAATCT
ACGGCGGTGATATAGTAGGCCTTGGACGGTGCAGACATGCTGTGTGTCTT
TTTTTTGTCAACGGCGTTGTTGTTCGTCGCACACAGTTGCGTTGGTGTCG
CGGAACGTCAAAGCTGTCAACCGTTGCCGTCTCTCCCCGCTGCGTAAGAG
GTGTGATATTACGGAGTATACCAGGTACTAGACGCAAAATATAAAATATG
AGGACCAGGGCGGAAGTTGTTACTGCCTTGATGGGTACGCTCACAGAATA
TTTACAAGGGGCTCAACCCAGCTCTTGGAGGGCCCCACATTTACATGTTG
ATATTCACGCGACAGCTGTACAGGTACTAGACGCAAAATATAAAATATGA
GGATCAGGGCGGAAGTTGTTACTGCCTTGATGGGTACGCTCACAGAATAT
TCACAAGGGGCTCAACCCAGCTCTTGGAGGGCCCCACA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig738:91744..102381-

>mRNA_P-littoralis_Contig738.19.2 ID=mRNA_P-littoralis_Contig738.19.2|Name=mRNA_P-littoralis_Contig738.19.2|organism=Pylaiella littoralis U1_48|type=CDS|length=819bp|location=Sequence derived from alignment at P-littoralis_Contig738:91744..102381- (Pylaiella littoralis U1_48)
ATGGCTTTGATGGACGCGCTTCAGCTCCCGGAATCTTCCGGGGGCATGGT
TGTGTTGGGGATGACTGCCCTAGGCGCGCTGATGCTGATATACCTCATGT
ACCAGCCCGCACCGGCAGCGGCAGCTGCCGACGACGATGATTCCCCGGAT
CCCCCGCCGCCGCCGAGGAATTTCACCATCGAACAATTGCACGAGTTTGA
CGGGCGAGACGAGGCGACGCCCTCCTACGTTGCCCTTCGAGGGGAGGTTT
TTGACGTGAGCTCGAAGCCAGAGCACTACAAGAAGGGCGGCGGATACCAC
CTCTTCGCGGGGCACGATGCCTCCTACAGCCTCGCCTTGGGCTCCCTCGA
TCCAGCAGATCTAGACAAGAGTTGCTCGGAGCTAAACGTGATGGAGAACG
ACACCTTGGACGGGTGGGTGGAGAAGTACAAGCATTACTCCGGGTACCCC
ATCATCGGGAAGGTCGTGCCGCCTCCGGAGCCGCGAGAATTTTCTTTGGA
AGAGCTGCGGCCGTTCGACGGGACGACTGAAACTCCCGAAGGTCACGCCG
CGCCTCCCATCTACGTGGGCGTGAAGGGCAAGGTGTATGACATGTCGTAC
GGAGGAGGGGCCATGTACGGGCCTGGGAAGTCGTACAATCTCTTCGCCGG
GAGGGACGCATCCGTCGCTTTGGCCAAGATGTCGTTTGCCCCTGAACACC
TCAACAACCCAGACACGAGCGCCTTAGATGAGCAAGACATGACGGTGCTC
CAAGACTGGGCAAACAAGCTGGCCAAGAAATACCCGGTCGTCGGCACCAT
TGCCGATAAGGCGCCCTAG
back to top