mRNA_P-littoralis_Contig738.15.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig738.15.2
Unique NamemRNA_P-littoralis_Contig738.15.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: D7FY33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY33_ECTSI)

HSP 1 Score: 400 bits (1027), Expect = 8.260e-135
Identity = 196/204 (96.08%), Postives = 200/204 (98.04%), Query Frame = 2 
Query:   41 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGD+LMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLK D TP+ISAFDLIGAPV+TDDFVVGGTCTNNLYGMCESFYRP+MDKDELFETMAQCLL SVDRDALSGWGGVVHIITPEGI SKTLKGRQD
Sbjct:    1 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDKLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKEDNTPFISAFDLIGAPVVTDDFVVGGTCTNNLYGMCESFYRPDMDKDELFETMAQCLLTSVDRDALSGWGGVVHIITPEGIMSKTLKGRQD 204
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BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: A0A6V1UZ14_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZ14_HETAK)

HSP 1 Score: 330 bits (845), Expect = 2.310e-107
Identity = 156/204 (76.47%), Postives = 179/204 (87.75%), Query Frame = 2 
Query:   41 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            MSILEYNG A +AMTGKNCVGICSD RLG Q +TVA DF K FK+ D+L VGL GLATDV T+ +LL F+LN+Y+LREERE+K ETFSA++++ LY++RFGPYFVEP+VAGLK D TP+ISA DLIGAPV+T DFVV GTCTNNLYGMCESFY+P M+ DELFETM+QCLLASVDRDALSGWG VVHIITPEG+TSKTLKGR D
Sbjct:    1 MSILEYNGGACIAMTGKNCVGICSDLRLGEQIKTVAMDFPKCFKLNDKLFVGLTGLATDVQTLTQLLRFKLNMYKLREEREMKVETFSAMLTNTLYERRFGPYFVEPVVAGLKDDNTPFISAMDLIGAPVLTSDFVVAGTCTNNLYGMCESFYKPEMEPDELFETMSQCLLASVDRDALSGWGAVVHIITPEGVTSKTLKGRMD 204
[Close]
BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: A0A6U4EA60_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EA60_9STRA)

HSP 1 Score: 320 bits (821), Expect = 9.380e-104
Identity = 151/204 (74.02%), Postives = 178/204 (87.25%), Query Frame = 2 
Query:   41 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            MSILEYNG A++AM GK+CVGI +D+RLG QAQT+ATDF+K+F++ D+L VGL GL TDV T++ LL FRLNLY+LREEREI P+ FSA++S ILY+KRFGPYFVEP+V GL AD + ++SA DLIGAPV TDDFVV GTCTNNLYGMCES YRP+MDKDELFET+AQCL ASVDRDA+SGWGG VH+ITPEG+ SKTLK RQD
Sbjct:    1 MSILEYNGGAMIAMVGKDCVGIAADTRLGAQAQTIATDFKKVFQLNDRLFVGLAGLGTDVQTLRNLLKFRLNLYKLREEREITPKAFSAMLSSILYEKRFGPYFVEPMVCGLNADGSAFLSAMDLIGAPVFTDDFVVQGTCTNNLYGMCESLYRPDMDKDELFETLAQCLQASVDRDAVSGWGGEVHVITPEGVYSKTLKSRQD 204
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BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: A0A6U1MII2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MII2_9STRA)

HSP 1 Score: 317 bits (813), Expect = 1.490e-102
Identity = 149/204 (73.04%), Postives = 174/204 (85.29%), Query Frame = 2 
Query:   41 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            MSI+EYNG A +AM GKNCVGICSD RLG QAQTVATDF K+FKM D+L +GL GLATD+ TM++LL FRLN+Y+L+EERE++PE FSA+MS +LY+KRFGPYFVEPI+AGLK D TP++S  DLIG    TDDFVV GTCT NLYGMCES YRP+   DELFET++QCLL+SVDRDA+SGWG VVHIITP+GITSK LKGR D
Sbjct:    1 MSIMEYNGGACIAMAGKNCVGICSDLRLGMQAQTVATDFPKVFKMNDRLFLGLTGLATDIQTMQQLLKFRLNMYKLKEEREMRPEVFSAMMSSVLYEKRFGPYFVEPIIAGLKDDNTPFLSTMDLIGCESKTDDFVVAGTCTPNLYGMCESLYRPDQGPDELFETLSQCLLSSVDRDAVSGWGAVVHIITPDGITSKMLKGRMD 204
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BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: A0A7S2FDP8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDP8_9STRA)

HSP 1 Score: 315 bits (806), Expect = 4.750e-101
Identity = 147/209 (70.33%), Postives = 180/209 (86.12%), Query Frame = 2 
Query:   26 VGQAKMSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            VGQ+ MSILEYNG AI+AMTGKNCV I  D+RLG Q QTV+ DF+KIFKM D+LM+G+ GLATDV+T+++LL F+LN+Y+LREERE+KPETFS L++ +LY+KRFGPYF EP+VAGL     P++SA DLIGAPV+T DFVV GTCT NL GMCE+ YRP+M+ D+LFET++QCLLASVDRDALSGWG +VH+ITPEG TS+ LKGRQD
Sbjct:   26 VGQSTMSILEYNGGAIIAMTGKNCVAIACDTRLGLQQQTVSCDFQKIFKMNDKLMLGVTGLATDVLTLQQLLKFKLNMYKLREEREMKPETFSWLLTSVLYEKRFGPYFTEPVVAGLNEKNEPFLSAMDLIGAPVMTKDFVVSGTCTANLNGMCETMYRPDMEPDDLFETISQCLLASVDRDALSGWGAMVHVITPEGTTSRRLKGRQD 234
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BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: A0A835ZI80_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI80_9STRA)

HSP 1 Score: 308 bits (788), Expect = 8.450e-99
Identity = 145/204 (71.08%), Postives = 177/204 (86.76%), Query Frame = 2 
Query:   41 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            MSIL YNG  I+AMTGK CVGI SD+RLGNQAQTVA DF+KIF+M D++M+GL GLATDV T+++LLTF++N+Y+LREER++KP+TFSAL+S  LY++RFGPYF EP+VAGL  D  P++SA DLIGAPV TDDFVV GT T NLYGMCE+ YRP+M+++ELFET++Q LLASVDRDALSGWGGVVHII P G+T+K LK RQD
Sbjct:    1 MSILSYNGGDIIAMTGKGCVGIASDTRLGNQAQTVACDFQKIFRMTDRIMLGLTGLATDVQTLQQLLTFKINMYKLREERDMKPKTFSALLSTTLYERRFGPYFTEPVVAGLDEDGKPFLSAMDLIGAPVFTDDFVVAGTSTENLYGMCETLYRPDMNEEELFETLSQALLASVDRDALSGWGGVVHIIGPNGVTTKQLKCRQD 204
[Close]
BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: A0A7S2XNS4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS4_9STRA)

HSP 1 Score: 306 bits (784), Expect = 3.360e-98
Identity = 147/204 (72.06%), Postives = 173/204 (84.80%), Query Frame = 2 
Query:   41 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            MSILEYNGAAI+AM GK+CVGI +D+RLG QAQTVATDF+K+FKM D+L  GL GLA+DV T+ +LL FR NLY LREERE+ PE FS L+S +LY+KRFGPYFVEPIVAGL     P++S  DLIGAPV TDDFVV GTCT N+YGMCE+ Y+P+M+ D+LFET+AQ LLASVDRDALSGWGGVVHIIT +G+TS+ LKGRQD
Sbjct:    1 MSILEYNGAAIIAMAGKDCVGIAADTRLGVQAQTVATDFKKVFKMNDRLFCGLAGLASDVQTLDQLLKFRQNLYELREEREMTPEVFSNLLSTLLYEKRFGPYFVEPIVAGLDNKGKPFLSGMDLIGAPVYTDDFVVSGTCTGNMYGMCETLYKPDMEPDQLFETLAQALLASVDRDALSGWGGVVHIITKDGVTSRELKGRQD 204
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BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: A0A4D9CN71_9STRA (Proteasome subunit beta n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CN71_9STRA)

HSP 1 Score: 305 bits (782), Expect = 6.950e-98
Identity = 145/205 (70.73%), Postives = 175/205 (85.37%), Query Frame = 2 
Query:   41 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKA-DRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            MSILEYNG A++AM GKNCV I SD R G QAQTVA +F K+ KM D+L VGL GLATD+ T+++LL FRLNLY+LREER+IKPETFSAL+SHILY+KRFGPYFVEP+VAGL+A D TP+IS  DLIGAPV   DFVV GTC  NLYG+CESF++P+++ ++LFE ++Q LLASVDRDALSGWG VVH+ITP+G+TS+TLK RQD
Sbjct:    1 MSILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 205
[Close]
BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: A0A6U6IRL2_9STRA (Hypothetical protein n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A6U6IRL2_9STRA)

HSP 1 Score: 303 bits (775), Expect = 7.530e-97
Identity = 145/204 (71.08%), Postives = 170/204 (83.33%), Query Frame = 2 
Query:   41 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            MSILEYNGAAI+AM GK CVGI SD+RLG QAQTVATDF K+FKM D+L VGL GLATDV TM +LL FR NLY LREER++ P   S L+S++LY+KRFGPYF+EP+VAGL  +  P++S  DLIGAPV TDDFVV GT T NLYGMCE+ Y+P+M+ D+LFET+AQ LLASVDRDALSGWGGVVHIIT +G+ S+ LKGRQD
Sbjct:    1 MSILEYNGAAIIAMAGKGCVGIASDTRLGIQAQTVATDFRKVFKMNDRLFVGLAGLATDVQTMDQLLRFRQNLYELREERQMSPRVMSNLLSNLLYEKRFGPYFIEPVVAGLDENGKPFLSGMDLIGAPVYTDDFVVSGTATGNLYGMCETLYKPDMEADQLFETLAQALLASVDRDALSGWGGVVHIITKDGVMSRELKGRQD 204
[Close]
BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Match: A0A7S3K6H9_9STRA (Proteasome subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6H9_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.500e-96
Identity = 140/204 (68.63%), Postives = 173/204 (84.80%), Query Frame = 2 
Query:   41 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCESFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLKGRQD 652
            MSILE+NGAAI+AM GKNCV I SD+R G + QTV  DFEK+FKM D++ VGL GLATDV T++  L F+L LY+LREER++KPE F+AL+SH+LY+KRFGPYFVEP+VAGLK D TP++   DLIGAPV T+DFVV GTC +NL G+CESF+RP+M+ D+LFET++QCLLASVDRDALSGWG +VH+ITP+G+TSK LK R D
Sbjct:    1 MSILEHNGAAIVAMAGKNCVAIASDTRFGLRQQTVTCDFEKVFKMSDKIYVGLAGLATDVQTLRATLKFKLALYKLREERKMKPEAFAALLSHMLYEKRFGPYFVEPLVAGLKEDGTPFLCGMDLIGAPVFTNDFVVSGTCASNLNGLCESFFRPDMEPDDLFETISQCLLASVDRDALSGWGAIVHVITPQGVTSKRLKARMD 204
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig738.15.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY33_ECTSI8.260e-13596.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1UZ14_HETAK2.310e-10776.47Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U4EA60_9STRA9.380e-10474.02Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U1MII2_9STRA1.490e-10273.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2FDP8_9STRA4.750e-10170.33Proteasome subunit beta n=1 Tax=Florenciella parvu... [more]
A0A835ZI80_9STRA8.450e-9971.08Nucleophile aminohydrolase n=1 Tax=Tribonema minus... [more]
A0A7S2XNS4_9STRA3.360e-9872.06Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A4D9CN71_9STRA6.950e-9870.73Proteasome subunit beta n=1 Tax=Nannochloropsis sa... [more]
A0A6U6IRL2_9STRA7.530e-9771.08Hypothetical protein n=2 Tax=Mediophyceae TaxID=58... [more]
A0A7S3K6H9_9STRA1.500e-9668.63Proteasome subunit beta n=1 Tax=Aureoumbra lagunen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig738contigP-littoralis_Contig738:80795..86730 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FY33
Preferred namePBC1
PFAMsProteasome
Model size1753
Max annot lvl2759|Eukaryota
KEGG koko:K02735,ko:K03660
KEGG Pathwayko03050,ko03410,map03050,map03410
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0016020,GO:0019538,GO:0019774,GO:0031090,GO:0032991,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0098588,GO:0098805,GO:1901564,GO:1902494,GO:1905368,GO:1905369
Exons5
Evalue4.91e-142
EggNOG OGsCOG0638@1|root,KOG0180@2759|Eukaryota
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-27_006930.1
EC3.4.25.1,4.2.99.18
Descriptionthreonine-type endopeptidase activity
Cds size615
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig738.15.2prot_P-littoralis_Contig738.15.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig738 81893..86690 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791524.4867609-UTR-P-littoralis_Contig738:80794..818921680791524.4867609-UTR-P-littoralis_Contig738:80794..81892Pylaiella littoralis U1_48UTRP-littoralis_Contig738 80795..81892 -
1680791524.5876908-UTR-P-littoralis_Contig738:86690..867301680791524.5876908-UTR-P-littoralis_Contig738:86690..86730Pylaiella littoralis U1_48UTRP-littoralis_Contig738 86691..86730 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791524.5346978-CDS-P-littoralis_Contig738:81892..820361680791524.5346978-CDS-P-littoralis_Contig738:81892..82036Pylaiella littoralis U1_48CDSP-littoralis_Contig738 81893..82036 -
1680791524.547896-CDS-P-littoralis_Contig738:82581..827561680791524.547896-CDS-P-littoralis_Contig738:82581..82756Pylaiella littoralis U1_48CDSP-littoralis_Contig738 82582..82756 -
1680791524.5598392-CDS-P-littoralis_Contig738:83029..831751680791524.5598392-CDS-P-littoralis_Contig738:83029..83175Pylaiella littoralis U1_48CDSP-littoralis_Contig738 83030..83175 -
1680791524.5688078-CDS-P-littoralis_Contig738:83761..839081680791524.5688078-CDS-P-littoralis_Contig738:83761..83908Pylaiella littoralis U1_48CDSP-littoralis_Contig738 83762..83908 -
1680791524.5782151-CDS-P-littoralis_Contig738:86687..866901680791524.5782151-CDS-P-littoralis_Contig738:86687..86690Pylaiella littoralis U1_48CDSP-littoralis_Contig738 86688..86690 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig738.15.2

>prot_P-littoralis_Contig738.15.2 ID=prot_P-littoralis_Contig738.15.2|Name=mRNA_P-littoralis_Contig738.15.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=205bp
MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDQLM
VGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRF
GPYFVEPIVAGLKADRTPYISAFDLIGAPVITDDFVVGGTCTNNLYGMCE
SFYRPNMDKDELFETMAQCLLASVDRDALSGWGGVVHIITPEGITSKTLK
GRQD*
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mRNA from alignment at P-littoralis_Contig738:80795..86730-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig738.15.2 ID=mRNA_P-littoralis_Contig738.15.2|Name=mRNA_P-littoralis_Contig738.15.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5936bp|location=Sequence derived from alignment at P-littoralis_Contig738:80795..86730- (Pylaiella littoralis U1_48)
CGAACGAGGAGAGCTTGTTCCTTGAGTCGGTCAAGCAAAAATGGTGAGTT
GAGAGTCCAGAGGGAATCCAGAAAGGACGTTCGCAGCAGGCACAGCAGTA
GCTTGCATCGCCCAAGCGAAAACGGGCTTGTGCTTTGTTTCACCAGTTTT
AATTTACTGCTGACTACAAGGTGAGTTGTGTACAATACATATATCCAAAA
TCGTTTCATTAGATAAGAAGTTGTGGATGCGGAGCAAGAGATTTGCGTTA
CAGCATTATTGCAGTACTGCTGTATTGCATTCTCCGCATAGTGAACCAGG
CACTTGTGATGCCCGTAGCAGTCCGCTCGTGGAGTGTTGTGTTTCCTCCC
TGCTTCCCTGTACCTTCTTTGGCCAAGGTGAGAGAGTTTGTGATCAAGAT
GTGTGAGTCTGACATCCGAGCCAGCAGCAACACATCATTGAGATATCTCC
GTTGGTTGGGTGCATTTCGATCCCGTTATTGGAGGTCTAGAGCTGCTGCT
ATTGCCTGAAACAAGGCAGCTCGAACGGCACCGCTTACACTGGAAACGCC
CTTTGATATGATAGCATACTTTCATCATCCAAGCGTTAGGCTTAAGATCG
TCCAGCAGATATTCCCAATTAGACTCTTCACGTCCTTGCTCGGTACCAAA
TCACACCGATGCTGTATCACGGCTGCCATCCGAAGCCTGATTGATGCCGT
TATGCAAAGTATTAGAGCAATGAAAAGTTGTAGAGTATGGGTGTACGGCC
CCCGAAACAGCAGTAGTGTTGGTACACAGCTCCAAACGCGCCGTAGACGA
AAGATACCCCCCCCCCGCCCCCATCCGAGGTGAACGCGAACGTCAGTTTT
CTCCTCAATAGCAGTGAGGCTGTTTCTTACGGTCAACGTTACTTTGGTCT
GGCGTTTTGAACCCCCTACTCAAATCCAACCAGCGAACCCGTCAACAGCC
CTGTCGGACACATCATACGACAGCACCAACCAGACCTCGACCCCTTGGGA
CACAGATGCAGATCAAACCTGATGTAGCATGTGCTCCAATATTCTCAAGT
TGGCCACAGAAAGTTTGGTGGCGGTGGGTGCGGGCTGTGGCGAGATTTTG
GCGGCGGTGCGTGTTGGAGCTGGAAAAACAGATGAAACGAAGTAACAGAC
TTTGCTCCTGTTTTTCCGGCCAAAAAGCAGGCTCGGATAGCGATTTTTTT
TTCACCGGAATTTCCTACCTCAACCCACCCCGCGGCCGAAACCTCGCCAC
AGCCAAAGCCCACACCCACCAAATTTCCTCCGACATGAGAACACTGGAGC
GTACCCTCCAACAGTTTTAGTCCCGATTGGTGTCCCACGGGTCGAGTTCT
GCTTGGTGCTGTCTCCTGTTGTGCTCAAGAAGTAGCTTTTCAAACCGTTT
GGGCTCTCTGTTGTTGCGGGAGGGGGGGTTTACCTCTGGAGAAAAAACAC
AGGATCAAATAACAGAGGCGTAAGAAACGGTCTGAACAGCATGTGAAGGC
CGGTTGGGTTCATACGAGCAGCACAGCGGTTGATCACATCCCATCACAGT
GTTTGCACTTGGGCGTCTTCTGTAACTCGCGGGCAGATAAGCGGACGGCG
CCACGCCGCCCGTGATACCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCATTCTCTCTCTGTGTTTGTGTGTAAGTGTTTCCATCCCACA
TATTTTCGGCACCAGTCTACACCTTTCGGTATGAAGTGGGTGCACCAGCC
GGGGTCGCACAGAAGGAAGGTCACACACGACCTTTTTTATTTTTTATTTT
TGTGACTTGTACAGAGAAGAAGGGCTTCTCTCTTGCTCCATGTTTTCCAT
TTCTCGTCCCTTCTGGACCTTCCTTGGATCGGATTGCAGCGGTCGGTGAG
GCCATCCGTGCCATGACCAGACACTTGATATACCGGTCGCCCCGGTGGAC
TAGTGGTCCCCTCGTTAACCACTAGATGTAGAGGAACGGGGGTTCGATTC
CCGGTGAATGTGTTCCTTTGCTACTTTGAAAGCGGCTATGCTGTTAGTAA
AATCAGATTCGGCTTCGCCGACGAGGGTAGGGACCGCGGATCCCTGCTCG
CGAGAAAAAATCTCACGCATGTACCGCAGAAGGAAGGTGGGGGTTAACTC
CTCCTGTGTGACCCCGTCGATGGGCCTAGCCTGTAGTTTGAACCGCAGGG
TGCAGACTAGTATGCCAGAGAATACGGGATGACAACACGTAGATGATCAT
GATCATGGTCCGCCCCATTCAACGTCAACACGACGATTTGGGTACCTACA
GCAGTAGGTCGCAATGCCGGATGGTACCTCCCACCTCCCACCGAAAGGGT
TGTCCCGCGTGAGCCTACATTCGTTCTGGTTCCATTCCCACTCTTACTTC
GGTATTGTTTTGAGAATGAAACCGTTTTCGCCCCGCCGAAAAACACCCAA
AGTGGACGAAGGTTTGATTTCAAGCCTGGCATGCTCCCACCCATCCGTGC
GGCGAAACCCAACTTCAGCCGTCAGTTTCGTGACATCTTGTAAATAGCCA
GCCCGCATGATGTGACAAAGTATAAATTGATCGTACGTATGGTTGTTTTC
ATACTGTACGTTCATATCGAGGCAAACAAAAGCCTTCCATGGTGTGGAAA
TTGGAAATCCCTCTTGTGATGGAATTCCCCGCTTTATTTTTCTTGCTTTT
TTTTTTATTTATTATCATCACCTGTGGTGGTGGCGGCATAATATTCTTGT
GTTTGTGGTTTATGTACAGCAGTATTCGTGATACCATGTGCTGTGTTTTC
GCTTGAATTGATGTGCCGGCAGTCTATCTTGGAGTACAACGGCGCGGCCA
TCTTGGCCATGACCGGCAAGAACTGCGTGGGAATCTGCTCCGACAGCCGC
CTCGGCAACCAGGCTCAGACCGTCGCAACTGACTTCGAGAAAATTTTCAA
GATGGGAGACCAGCTCATGGTGGGTGGCGATGGCAGCAGCGCAGCGGTTT
GTTGTCACCCTTCTTCCCTCGGTGGCATGTCGTCAGCAAAAGCGGTGCCA
AGTTCCTCATGTGTCTGCGAAAGCAATGATTGCGGCCGTGTTCACCGTCG
TATTTTGCTTTTGTCAGTGCGGTCGTGTTGCGGCGTGCCACTGTATTTTC
CGACGGTATGGACGTGTCTGATGCATAATCGAAAAGCGTACGAACAACCG
CGGTCCAGAAAGCTCTTCTGTACTGTCGTAATTTTGGCAGCATCCCCATG
ACCAAGCGCATTCAAGTATTCATATCTGTCACGCTGCTGGTGTGATGTTG
AGATCATTATCGCAAGTCACCCGCGCATGGATGTATGCCACAATAACAGC
ATGAATTTGATATTTTGCAGGGACATTGATTTGCTACCAAGTGCATACTT
TCGTGCGGTACCCAAAATGTGGACACCTGTCTCAGAGCCTGCTCTGCTAG
GTAGGCACAGCACAGCGTGCGGGTTTACCGCCACATTTTTTTATATCGTG
ACTACAACGTGCTGTCTGTTCCAAACCAACGGTGTGCGACGATACCAACC
TACAGGTGGGGCTGCCAGGGCTGGCAACGGACGTGATCACAATGAAGGAG
CTCTTGACCTTCAGGCTCAACCTTTACCGGCTCCGGGAGGAACGAGAGAT
AAAGCCGGAGACGTTTTCGGCGCTCATGTCCCATATCCTTTACCAGAAAA
GGTAACCGCGTCGATTTTTGTTTTTCTTTTCCACCTCTGTTTTTGGCCGT
CGTTCCGTCCGGACGGCCACACAAGCGTGCCCTCATCTTCAAGTTTCGGG
CCTGGTGTCGTATGAGTTTACAATATTTAGACACAAATAGCCCCCCCCCC
CTGACGCGTTTTTGTGATGTCCAACAAATTGCGGTTTCCATACGCTTCTT
GCTTGCTTCGTTTTTCTCTGCTGCTTCGTTTTTCTCTGCTGCTTCGTTTT
TCTCTGCTATGTTCTTGTCTTCAGGTTTGGCCCGTACTTCGTGGAGCCCA
TCGTGGCCGGGTTGAAAGCGGACAGGACGCCGTACATCTCGGCCTTCGAT
CTCATCGGGGCGCCCGTGATTACCGACGATTTCGTCGTTGGGGGGACGTG
CACGAACAACTTGTACGGCATGTGCGAAAGCTTCTACAGGCCAAACATGG
TGAGAAAGTCCATCGGGCCGGGGGGCCGCGGGGGGAGAGATAGTGAGCTG
TCAAAAAGCGATGAGTGCTTTCTCGCGAACGTTAGATTTGGCTTGTGTTG
TGGCATACGGCAGCACCTGCCGCCTTCTTTGCGTGCAATATACAGCAGAC
CGGAAATATCAAGGTACCCCCCCCCCCTCACGGGTGGAGAAACAGGCACG
GAACACAAATTTGGCGAAAAAATCGGAGCAAGTGCCGCTGAAATTGAAGT
GTAAACACCTTGGTGAATCGGTGTGTAGAATTACATATCATGTTAGATGC
ACTTTAAAACGGCGGGGAAGTACTACATGGACCCACGAGTTTGTCGAATT
TCATGTTTCACAGAACAGCAAACACAAGTTCGGAAGAACAAAGCAGGACA
ACAGCTGCTGCTGCTGCTGCTGCTATCATGCTGTCGGGACAGGGCTGCAC
GGATTTCCCTGTGGCTGTCGTATCTGTCGCGACGGGAATCACATTGGTTG
AAATCGACAACACCTAACAGTAAAACTTTTTCTTGTTTTTTTAGGACAAG
GACGAGCTGTTCGAGACGATGGCGCAATGCCTGCTGGCCTCGGTAGATCG
CGATGCACTCAGCGGGTGGGGCGGAGTGGTACACATCATCACACCGGAGG
GTATCACGTCCAAGACGCTCAAGGGTAGACAGGACTAAACAGAACAGATG
CTGTCATAAGTCTTCCGCGCAGGGCCTGCTGCTACGTACGGAGTATTATA
GTTTCAACAAGGATGGGCTAAAGAACAAAAGAAAATACTGCGGGGGAGGC
ACAACAGTGCTGCTGTGCTTTGTGAGCTACTTCAGTCGTGTCGCGGTTAG
TCCGCGGTAAGTGAAGTGCTTTTTTTTTTTGTGGCAACGTCGAGGCGTCA
TTTGTTGTTTTGGTGACGGGCGTTGGGAGCGTGCACACAGCAATCCAGGG
CGACTTCTCCTGTCTTTTGTAATATCATACAAGAAAAAAAGAAAATCGTT
TTACGGGGTTTCGCCCTCTGCCGTCCGACTGGACTGTTATCATGGGTGAT
GGACGGTGCCGTTTTTATTTTTGTGAAAGGGGACGAGGCAAAGGCGAGCG
CTACGATAGAGGATTGCGCTGTCCGGGGGAGGATGTGGGAAACGTTTGAG
ACGTTGACGGCGCGTTGGTTTGGGCGTTGCCTGCTACTACCGGCACGTCC
CAGGGCGCGATCGTTTCGGCCGGTCATCGGGCGTGTACTGCAGCAGTATC
GACTCATGACCAGGTGTCATTATATCTTGCGGGCACCCAACGATGCAGTC
GACGACTTGCGTGAGTTGGTCGTGACGTTTTAGCAGATTATTCCACTATA
CCACTACAGTAGCGCACTTTTTTCTTGTACATGGCTCGTCCGAAAGACGC
TTGTGCGCGGACTACACGAGGCGGCAGTATCTTTTGTTGCAAGCCCGAGG
CCGTGTTGTGGGCAGCGAAGCCACGGTCGCATCGATTGCAGGTTTCGGTG
AGGCTTTGCCCCGGAACGCTGATGAGGGTTAAGATAACCTGAGGATGGCG
TACGTGCCGTGTAATGTTCGCCTCTCGAAACACATGTAGCGCAAAAACCA
TTGCGCGGCTCCGTGAAAAACGGTAAAATGACAAGATACGGATTTCGGTT
ACGCTGGGTTTTTGCCCCCCTTTCACACCAAGTAATCGCGGTGCCACTGC
AGACGTGATCGTTACATCTTCTGCCGAAAACGACAGGGTCTGGGTTTTTT
GTGTGACGCATCATGGGTCGGTTGCTTTCTCCTCTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig738:80795..86730-

>mRNA_P-littoralis_Contig738.15.2 ID=mRNA_P-littoralis_Contig738.15.2|Name=mRNA_P-littoralis_Contig738.15.2|organism=Pylaiella littoralis U1_48|type=CDS|length=615bp|location=Sequence derived from alignment at P-littoralis_Contig738:80795..86730- (Pylaiella littoralis U1_48)
ATGTCTATCTTGGAGTACAACGGCGCGGCCATCTTGGCCATGACCGGCAA
GAACTGCGTGGGAATCTGCTCCGACAGCCGCCTCGGCAACCAGGCTCAGA
CCGTCGCAACTGACTTCGAGAAAATTTTCAAGATGGGAGACCAGCTCATG
GTGGGGCTGCCAGGGCTGGCAACGGACGTGATCACAATGAAGGAGCTCTT
GACCTTCAGGCTCAACCTTTACCGGCTCCGGGAGGAACGAGAGATAAAGC
CGGAGACGTTTTCGGCGCTCATGTCCCATATCCTTTACCAGAAAAGGTTT
GGCCCGTACTTCGTGGAGCCCATCGTGGCCGGGTTGAAAGCGGACAGGAC
GCCGTACATCTCGGCCTTCGATCTCATCGGGGCGCCCGTGATTACCGACG
ATTTCGTCGTTGGGGGGACGTGCACGAACAACTTGTACGGCATGTGCGAA
AGCTTCTACAGGCCAAACATGGACAAGGACGAGCTGTTCGAGACGATGGC
GCAATGCCTGCTGGCCTCGGTAGATCGCGATGCACTCAGCGGGTGGGGCG
GAGTGGTACACATCATCACACCGGAGGGTATCACGTCCAAGACGCTCAAG
GGTAGACAGGACTAA
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