mRNA_P-littoralis_Contig738.12.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig738.12.4
Unique NamemRNA_P-littoralis_Contig738.12.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: D7FY35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY35_ECTSI)

HSP 1 Score: 512 bits (1319), Expect = 2.530e-173
Identity = 257/273 (94.14%), Postives = 268/273 (98.17%), Query Frame = 3
Query:  654 SRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPAPTGEPLLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPVPLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELLQSSG 1472
            SRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGST+ AL TLWEEGG+ RLYRGVSFAL+QGPLSRFGDTAANVGVLALLEAFESTR+LPLPVKSAAGSLAAG+WRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATA+ATFVGHYPWYFTYNSLGAWLPPAP+GEPLLKLGRQALLGLCSSCVSDCCSNSIRV+KTTKQTAP+PLSYPEALKQV+D+DGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELL S G
Sbjct:   21 SRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELLASGG 293          
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: A0A835Z3L6_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L6_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 3.380e-127
Identity = 194/287 (67.60%), Postives = 237/287 (82.58%), Query Frame = 3
Query:  591 LVIAQASAAPVDVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPAPTGEPLLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPVPLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQ 1451
            +  A A A PVD+  I +K+  RALGGGASGAAAA VQVLSLMWLRTTMNYQY+NGGST +AL TL+ EGG+PRLYRG+ FALLQGPLSRFGDTAAN GV+ALL+A  +T+ LPLP+KSA GS+AAG+WRI LTPID  KTTLQV G  G +++ +++ A GP+ LF+GA+AT+ AT VGHYPWY TYN+LG WLP AP G+ LL+LGR AL+G+C+S VSDCCSNSIRV+KT KQT+P  ++Y +ALK V+DE GVPGLF RGLQTR++ N LQGALF+V WK+F+
Sbjct:    3 MAAAGAEAPPVDIKKILSKSAKRALGGGASGAAAAGVQVLSLMWLRTTMNYQYRNGGSTVDALTTLYAEGGVPRLYRGLPFALLQGPLSRFGDTAANAGVIALLDALPATQALPLPLKSAGGSIAAGLWRIALTPIDTIKTTLQVVGEGGGEVVLKRLQAEGPSALFQGAVATSVATMVGHYPWYLTYNALGEWLPMAPAGDELLRLGRAALMGVCASSVSDCCSNSIRVIKTAKQTSPEQITYTQALKSVLDEGGVPGLFGRGLQTRLVANGLQGALFSVLWKFFE 289          
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: A0A1Z5K5F6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5F6_FISSO)

HSP 1 Score: 345 bits (886), Expect = 4.230e-108
Identity = 179/302 (59.27%), Postives = 228/302 (75.50%), Query Frame = 3
Query:  582 SSELVIAQASAAPVDVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPAPTGEPLL-KLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPV---------PLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQEL 1457
            SS L+ + ++AA VD  AI AKAG +ALGGG +GA+A+VVQVLSLMWLRTTMNYQY+ GGS  NAL+TLW EGGIPR Y+G+ FAL+QGPL+RFGDTAANVG++ALLE+   T+ LPLPVK+A GS+ AG+WRI L P+DA KT+LQV GA+G K L E V  +GP  L+ GALA A AT  GH+PW+ T+N L   LP   + + LL  L R A +G+ +SCVSDC SNS+RV+KTTKQTA +          LSYPE ++ ++++DG+  LF RGLQTR+L NA+QGA F+V WKYFQ++
Sbjct:   32 SSTLLSSISTAASVDWSAILAKAGKKALGGGTAGASASVVQVLSLMWLRTTMNYQYRYGGSLPNALSTLWSEGGIPRFYQGLPFALVQGPLTRFGDTAANVGIIALLESLPQTKELPLPVKTACGSITAGLWRIFLMPVDASKTSLQVEGADGLKRLWESVRESGPAPLYRGALAQAAATTAGHFPWFLTFNFLNEQLPAVSSSDDLLLSLARSAFVGMSASCVSDCVSNSLRVIKTTKQTAQLGNDTTIKQKELSYPEVVQIIIEKDGIIALFGRGLQTRLLTNAIQGAAFSVLWKYFQQV 333          
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: A0A7S3ZH28_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZH28_9EUKA)

HSP 1 Score: 335 bits (858), Expect = 1.420e-103
Identity = 177/291 (60.82%), Postives = 208/291 (71.48%), Query Frame = 3
Query:  588 ELVIAQASAAPVDVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPAPTGEPLLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPVPLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELL 1460
            ELV A A A  +D G I  KA  RA+GGG SGA A V QVLSLMWLRTTMNYQY+ G  T  AL  L+ +GGIPRLY+G+SFAL+Q PLSRFGDTAAN GVLA+LEA   TR LPLP+K    SLAA  WRI +TP+D  KTTLQV G E    L  KV+  GP VL+ GA A A ATFVG+YPW+ TYN +   LP    G+    L R+A LG+ +S VSD  SNS+RV+KT KQT+ VP+SY EA K++V+ DG  GL  RGLQTR+LVN LQGALFAVAWKYF++ L
Sbjct:   70 ELVSAVALAGAIDYGEILRKASKRAIGGGTSGALAGVAQVLSLMWLRTTMNYQYRYGTDTLTALGALYSQGGIPRLYQGLSFALVQNPLSRFGDTAANAGVLAILEALPETRELPLPLKQGMASLAASSWRIAITPVDTLKTTLQVDGKEALSQLKNKVSLGGPGVLWNGAFAAAAATFVGNYPWFLTYNYVDGILPHPEEGDVATMLARRAALGIAASAVSDTISNSLRVIKTAKQTSKVPISYVEAAKEIVEADGPLGLLGRGLQTRLLVNCLQGALFAVAWKYFEKKL 360          
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: A0A0G4GYY9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GYY9_VITBC)

HSP 1 Score: 330 bits (847), Expect = 2.750e-102
Identity = 166/286 (58.04%), Postives = 216/286 (75.52%), Query Frame = 3
Query:  597 IAQASAAPVDVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPAPTGEPLLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPVPLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQE 1454
            ++ A+A  VDV  I  K+  RA+GGG SG+AA+V+QV SLMWLRT+MNYQY  G      LATLW EGG+PR YRG+ FAL+Q PLS+FGDTAAN GVLALL++FEST  LPL VK+A+ S+AAG+WRI + P+D +KTT+QV GA G   +++KV   GPTVL+ GA+A + ATFVGHYPW+FTYN L   LPP   G+ L+KL R A +GLC+S ++D  SNS+RV+KTTKQT+    SY E +  ++++DGV GLF RGL TR+L N +QG LFAVA+++F+E
Sbjct:   50 LSSATAKKVDVKTILQKSAKRAVGGGLSGSAASVLQVFSLMWLRTSMNYQYTTGLPLNTTLATLWSEGGVPRFYRGLPFALVQAPLSKFGDTAANAGVLALLDSFESTMGLPLFVKTASASVAAGLWRIVIFPVDTFKTTMQVRGAAGIPQVSDKVKETGPTVLYNGAIAASAATFVGHYPWFFTYNYLQEHLPPVEPGDTLMKLMRNAFIGLCASSLADSLSNSLRVIKTTKQTSEDSPSYREVVSGIIEKDGVRGLFGRGLATRLLTNGVQGMLFAVAYRFFEE 335          
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: B5Y3N0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3N0_PHATC)

HSP 1 Score: 330 bits (845), Expect = 2.770e-101
Identity = 171/288 (59.38%), Postives = 216/288 (75.00%), Query Frame = 3
Query:  621 VDVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPAPT-GEPLLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPV--------PLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQEL 1457
            VD   IF KA  +ALGGG +GAAAAVVQV SLMWLRT+MNYQY+ GG+ Q++L TLW EGGI RLY+G+ FAL+QGPL+RFGDTAANVG+L LLE   +T+ LPLP+K+A GS+AAG+WRI L P+DA KT +QV G+ G K L + V  +GP+ L+ GALA A AT  GH+PW+ TYN L   LP   +  + LL L R ALLGL +SCVSDC SNS+RVVKTTKQTA V         ++YPE +  ++++DGV GLF RGLQTR+L N +QGA+F+V W+YFQ++
Sbjct:  101 VDWQGIFQKASKKALGGGKAGAAAAVVQVCSLMWLRTSMNYQYRYGGNLQSSLNTLWAEGGIGRLYQGLPFALVQGPLTRFGDTAANVGILVLLETLPATQDLPLPLKTACGSVAAGLWRIVLMPVDASKTVMQVEGSGGLKRLWDSVLESGPSPLYRGALAQAAATAAGHFPWFLTYNYLNDQLPAVSSEADLLLSLARSALLGLSASCVSDCVSNSLRVVKTTKQTAQVGEGSDSKKEITYPEVVAMILEQDGVVGLFGRGLQTRLLTNMIQGAVFSVLWRYFQQV 388          
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: A0A7S0DFV9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DFV9_9EUKA)

HSP 1 Score: 320 bits (821), Expect = 5.080e-99
Identity = 167/295 (56.61%), Postives = 210/295 (71.19%), Query Frame = 3
Query:  609 SAAPVDVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPA-----------PTGEPLLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPVPLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELL 1460
            SA  +D  +I  KA  RALGGG SGA A V QVLSLMWLRT MN+QY+ G ST  A+ TL+E+GGI RLY+G+ FAL+Q P+SRFGDTAAN GVL+ LEA   T TLPLPVK A  SLAA  WRIG+TPID +KTTLQV G+   + L EK++  GP VL+ GA A A ATFVG+YPW+ TYN +   LP A           P+   L +L R+A +G+ +S VSD  SNS+RV+KT KQT+ VP+SY +  K ++D+DG+ G+  RGL TR+LVN LQGALF+V WKYF+++L
Sbjct:    4 SAVAIDYQSILRKASKRALGGGTSGALAGVAQVLSLMWLRTAMNFQYRYGTSTLEAIKTLYEQGGITRLYQGLGFALVQNPISRFGDTAANAGVLSFLEAIPETSTLPLPVKQAVASLAASSWRIGITPIDTFKTTLQVEGSTAVEQLKEKISLGGPGVLWNGAFAAAAATFVGNYPWFLTYNYVDKALPSALAIAEAVGHHDPSNVVLYELFRRASIGIAASTVSDTLSNSLRVIKTAKQTSKVPISYVDVTKDIIDKDGLKGILGRGLGTRLLVNCLQGALFSVVWKYFEKIL 298          
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: A0A2R5GDU3_9STRA (Solute carrier family 25 member 38-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDU3_9STRA)

HSP 1 Score: 320 bits (820), Expect = 3.280e-98
Identity = 170/298 (57.05%), Postives = 217/298 (72.82%), Query Frame = 3
Query:  594 VIAQASAAPV------DVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPAPTGEP---LLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPVPLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELL 1460
            V A A AAPV       +G I  +AG RA+GGG  GA A  VQVLSLMWLRTT+NYQY+NGG+ + A +TL++EGGI R YRGV   L QGPLSRFGDTA+N G+LALL++ E+T TLP+ VK+AA S +A  +RI L PIDA KT+LQV+G +G ++L+ K+   GP VL+ GAL +A+ATFVGHYPW+FTYN+L   +P     +P   L KL R A++G  +S VSD  SNSIRV+K TKQT+  P++YPEA +QVV +DG+ G+F RGLQT+IL N LQG LF V WK F++ L
Sbjct:   46 VAAAAKAAPVTPVQKESLGEILERAGKRAIGGGLPGAMAMGVQVLSLMWLRTTVNYQYRNGGTMREAFSTLYKEGGIRRFYRGVGPGLFQGPLSRFGDTASNAGMLALLDSSETTATLPVAVKTAAASFSAATFRIFLMPIDAAKTSLQVNGKDGLRILSSKMKVGGPQVLWAGALGSASATFVGHYPWFFTYNTLNEMIPMPAEDDPNHTLKKLSRNAVIGFSASAVSDTVSNSIRVLKVTKQTSAEPITYPEAFRQVVAKDGLSGVFFRGLQTKILANGLQGMLFTVLWKQFEQTL 343          
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: A0A836BP93_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BP93_9CHLO)

HSP 1 Score: 320 bits (821), Expect = 3.940e-98
Identity = 167/306 (54.58%), Postives = 218/306 (71.24%), Query Frame = 3
Query:  537 LGPLDAASAAATTSVSSELVIAQASAAPVDVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPAPTGEPLLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPVPLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQE 1454
            L P++ AS  A ++  SE     A++ P  +G + ++AG +ALGGG  GA A   QVL+LMW+RTT+NYQY+ G     AL TL++EGG+PR YRG+  AL+QGP+SRFGDTAAN G LALL+++ES+RTLP  VK+ A S AAG +RI L P+D  KT +QV G +  K L  KV A GP+VLF GALA++ ATFVGHYPW+ TYN L   LP AP+ +   KLGR AL+G CSS VSDCCSNSIRV+KTTKQT   P++YP+  K ++ +DGV GLF RGL+T+I+ N +QG  F + W+  Q+
Sbjct:    7 LRPVNEASMVAASA--SEAPSPVAASPPRPLGQVLSEAGRKALGGGVPGALAMATQVLTLMWMRTTINYQYRYGTDMTTALRTLYKEGGVPRFYRGLLPALVQGPMSRFGDTAANAGTLALLDSYESSRTLPSGVKTLAASAAAGAFRILLMPVDTVKTIMQVEGKDALKALGAKVRAGGPSVLFHGALASSAATFVGHYPWFATYNYLNGVLPRAPSDDMAKKLGRSALMGFCSSFVSDCCSNSIRVIKTTKQTTKEPMTYPQVAKMIIAKDGVVGLFGRGLKTKIISNGVQGICFTIVWRMGQD 310          
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Match: A0A7S2WCX6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WCX6_9STRA)

HSP 1 Score: 318 bits (816), Expect = 1.000e-97
Identity = 162/273 (59.34%), Postives = 200/273 (73.26%), Query Frame = 3
Query:  636 IFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGDTAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGAWLPPAPTGEPLLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPVPLSYPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQE 1454
            I  KAG RALGGG  GA A  +QV SLMWLRTTMNYQY+ G ST+ AL TL++EGGI R YRGV  AL+QGP+SRFGDTAAN G+L+LL + ESTR LP+  K+A  S AAG+WR+ L P+D  KT LQV G +G  +L  K+ + GP V++ GA+  A AT VGHYPW+FT+N+L   +P     E   KL R AL+G CSS VSDC SNSIRV+KTTKQT+   +SYP+A+K V+++DGV GLF+RGLQTRI+ N  QG LF V WKY +E
Sbjct:   62 ILEKAGKRALGGGLPGAMAMGIQVGSLMWLRTTMNYQYRYGTSTKVALQTLYKEGGIRRFYRGVGPALIQGPMSRFGDTAANAGMLSLLNSQESTRDLPVAAKTACASFAAGLWRVFLMPVDTLKTVLQVEGTKGPGVLKNKIKSGGPFVMYHGAVGAAGATMVGHYPWFFTFNTLQEKIPMPGEDEVGKKLARNALIGFCSSFVSDCTSNSIRVIKTTKQTSRETISYPQAVKLVIEKDGVSGLFIRGLQTRIIANGFQGMLFTVLWKYMEE 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig738.12.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY35_ECTSI2.530e-17394.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z3L6_9STRA3.380e-12767.60Mitochondrial carrier domain-containing protein n=... [more]
A0A1Z5K5F6_FISSO4.230e-10859.27Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S3ZH28_9EUKA1.420e-10360.82Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A0G4GYY9_VITBC2.750e-10258.04Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
B5Y3N0_PHATC2.770e-10159.38Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S0DFV9_9EUKA5.080e-9956.61Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A2R5GDU3_9STRA3.280e-9857.05Solute carrier family 25 member 38-like n=1 Tax=Ho... [more]
A0A836BP93_9CHLO3.940e-9854.58Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A7S2WCX6_9STRA1.000e-9759.34Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig738contigP-littoralis_Contig738:67852..73255 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FY35
PFAMsMito_carr
Model size2675
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons7
Evalue2.05e-180
EggNOG OGs28MPG@1|root,2QU7F@2759|Eukaryota
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-27_006960.1
DescriptionMitochondrial carrier protein
Cds size1362
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig738.12.4prot_P-littoralis_Contig738.12.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig738 69046..73136 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791524.1734223-UTR-P-littoralis_Contig738:67851..690451680791524.1734223-UTR-P-littoralis_Contig738:67851..69045Pylaiella littoralis U1_48UTRP-littoralis_Contig738 67852..69045 -
1680791524.272699-UTR-P-littoralis_Contig738:73136..732551680791524.272699-UTR-P-littoralis_Contig738:73136..73255Pylaiella littoralis U1_48UTRP-littoralis_Contig738 73137..73255 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791524.1853929-CDS-P-littoralis_Contig738:69045..692131680791524.1853929-CDS-P-littoralis_Contig738:69045..69213Pylaiella littoralis U1_48CDSP-littoralis_Contig738 69046..69213 -
1680791524.1988053-CDS-P-littoralis_Contig738:70088..701711680791524.1988053-CDS-P-littoralis_Contig738:70088..70171Pylaiella littoralis U1_48CDSP-littoralis_Contig738 70089..70171 -
1680791524.2152867-CDS-P-littoralis_Contig738:70689..707781680791524.2152867-CDS-P-littoralis_Contig738:70689..70778Pylaiella littoralis U1_48CDSP-littoralis_Contig738 70690..70778 -
1680791524.2249465-CDS-P-littoralis_Contig738:71467..715861680791524.2249465-CDS-P-littoralis_Contig738:71467..71586Pylaiella littoralis U1_48CDSP-littoralis_Contig738 71468..71586 -
1680791524.2352324-CDS-P-littoralis_Contig738:71810..719731680791524.2352324-CDS-P-littoralis_Contig738:71810..71973Pylaiella littoralis U1_48CDSP-littoralis_Contig738 71811..71973 -
1680791524.2475312-CDS-P-littoralis_Contig738:72196..723091680791524.2475312-CDS-P-littoralis_Contig738:72196..72309Pylaiella littoralis U1_48CDSP-littoralis_Contig738 72197..72309 -
1680791524.2604122-CDS-P-littoralis_Contig738:72509..731361680791524.2604122-CDS-P-littoralis_Contig738:72509..73136Pylaiella littoralis U1_48CDSP-littoralis_Contig738 72510..73136 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig738.12.4

>prot_P-littoralis_Contig738.12.4 ID=prot_P-littoralis_Contig738.12.4|Name=mRNA_P-littoralis_Contig738.12.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=454bp
MNRWTSLALLASPMAPPSAAFLNPTSCGPFQQPKIQQQRQQPTRSSRGRP
ITGRESTTQLNDASNVQEKPPLLLQPTATAAAAADVWKLPPLFIASGDEA
AQHQQHDDEREIDSPAITTGLSILNIAATAAVVIAVVNYLGPLDAASAAA
TTSVSSELVIAQASAAPVDVGAIFAKAGSRALGGGASGAAAAVVQVLSLM
WLRTTMNYQYKNGGSTQNALATLWEEGGIPRLYRGVSFALLQGPLSRFGD
TAANVGVLALLEAFESTRTLPLPVKSAAGSLAAGVWRIGLTPIDAYKTTL
QVSGAEGTKLLAEKVAANGPTVLFEGALATATATFVGHYPWYFTYNSLGA
WLPPAPTGEPLLKLGRQALLGLCSSCVSDCCSNSIRVVKTTKQTAPVPLS
YPEALKQVVDEDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELLQSS
GSP*
back to top

mRNA from alignment at P-littoralis_Contig738:67852..73255-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig738.12.4 ID=mRNA_P-littoralis_Contig738.12.4|Name=mRNA_P-littoralis_Contig738.12.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=5404bp|location=Sequence derived from alignment at P-littoralis_Contig738:67852..73255- (Pylaiella littoralis U1_48)
GGCGTTTGGAACAGTGCACGTGCTCTCCATCTCATCTCTGTGTCAGAGTG TGCGGGTGTATCCGTGGCTCCGTCTTTGTATCCCTCTTCCGTCGCTTGCA CTGACCTGGGGCGTCAGCGATGAATCGATGGACGAGCCTTGCTCTGTTGG CAAGCCCGATGGCGCCGCCGTCGGCTGCTTTTCTCAACCCGACGTCTTGT GGACCATTTCAGCAACCCAAGATTCAACAGCAACGACAACAGCCAACACG ATCATCGCGAGGGCGCCCCATAACGGGACGAGAGTCCACGACTCAATTGA ACGACGCATCCAACGTTCAAGAAAAGCCACCACTACTACTACAACCAACA GCAACAGCAGCAGCAGCAGCAGACGTGTGGAAACTGCCTCCGCTTTTCAT AGCTTCTGGAGATGAGGCGGCCCAGCATCAGCAGCATGATGACGAACGAG AAATTGACAGTCCCGCCATTACCACCGGACTGTCAATATTGAATATCGCT GCGACGGCAGCCGTGGTCATAGCGGTGGTGAACTACCTGGGACCTCTCGA CGCTGCCTCTGCTGCTGCCACTACTTCCGTGAGCTCCGAGTTGGTAATAG CACAAGCAAGTGCGGCCCCGGTTGACGTTGGAGCGATATTCGCGAAGGCG GGCAGTCGAGCGCTCGGCGGTGGAGCGAGTGGGGCGGCGGCGGCGGTGGT CCAGGTGCTGTCTCTCATGTGGCTGCGCACAACGATGAACTATCAGGCAA GAGCTGTTGTAACAAGTGTGCGTGCTGCATTTCCCAGAGCATCAACAGCG AAATGCAGACGTGCATCCAAGCTCTTAAACTCATCCTCCGTACATTATTT CGGTCAAACGCTATATTGAATACGAGGCAAACCGGCTGTCTTCATCCAGA CTCCCTCACTAGAAATACCTTTGCTCCGGCTTTTCGTACCTTGTAGTACA AAAACGGCGGGTCTACCCAAAACGCTCTAGCGACACTGTGGGAGGAAGGA GGCATTCCACGGCTCTACCGAGGGGTTTCGTTCGCGTTGTTGCAAGGCCC CCTCAGCAGGTGTGTACTGTGCGTGTTTTTGTGGACGAAGGCTCTTGTTT GCAGCTTCCATCCATTGAAGCAATTGAATCACACCGGTCGCATGCCAAAT TTTATTGGCAATTTTTGCAGCTTCGCCATGAAAATCCACAAAGAAAGGCG TAAAAAATACTTGGTGCTTCGAGCGCAAATGAGCTGTCCGAAACCATCCA ACCCTTGCATCACCCCCGCCCTCCCCATCAAGATTTGGAGACACGGCCGC CAACGTGGGTGTGCTGGCCTTGCTCGAGGCTTTCGAGTCTACTAGAACAC TGCCACTCCCAGTAAAGTCGGCGGCAGGGAGCCTCGCGGCAGGCGTATGG CGCATTGGGCTCACGCCGATAGATGCCTACAAGACCACGTTACAGGTACA GTAGAGTAACTTGTGTTGCGAAGGGGGCTGGTGTAGAGAGGCGTACGGTC GTGTGATGAGGTCGAACGACTGTATGACGGGACTTTCCCCCACCGTTCGA TGTCGCCACATCTGTCTAAAAATCTTCCGTTCAAGTGTATATTTCACCAA CACCAGAAGAAAAGCCGAGCGTGCTATCTTATCTCGTGTTTTCACGTTTT CTTTCTGCCTTTTGAGAAGGTTTCAGGCGCAGAGGGCACCAAATTGCTCG CCGAAAAGGTGGCTGCAAATGGGCCCACTGTGCTCTTCGAAGGAGCTCTG GCGACAGCCACGGCAACTTTTGTCGGTCATTACCCGTGGTGAGCTACTGT AGAGCAGCTGCATTTCATTCGTCACAAACGGCTATATAGAAGGAGATGTC TACAGATGATGGTAATATCGTTCTGGAGGGCACCTAACGCATCTTTTGAG CGATACAACCCGTGTCTACTATCCGGGAAGGCCCCAAAGCGCGCTTGTCT CCTGAAATACTGGTTTGTAAATCGAATTTATCCAGAAAAGGTCAGGGAAT TGCGTACTGTTCTTGTAGAATATCGACGGAAGTCGCAGTGTCTAGCTCCC GGCTGCGCATGCTCCCATTCGTACTGTACTGTAGTGCTACGATTCCGGCT TATCCCCCCACGATCTACCTCCAAGGTCGGCTCGCTTGAATCACGAGCAT GTATGACACTCAGACCGATTGGAACAAAACCCCACCAGCGGCGTCTGCCC GTCGGAGTCGAATCCTGTAGACCGATTGCACATTGAGCGCCTTTTTTTTG CAAGTCAATTTTTGTACGTTATCGCCCCTTGTACCTCCCCACGCCTCTCC CGTACCCCTTTCCTTCCCACCGCCTCCTCCTTTCGCATCGCGACTTCTCC CGCGCCTCTTACCTTAAGAACTCCTCATCCACGCCAGTACAAGCTTGACC TTTCGCCCTCAACCACCTTCGGGTTGCGTTTGCGTTTTCGCATGTCGGCT ATAATCGATATATTTGTATCGACGAAGGTATTTCACCTACAACTCCTTGG GAGCTTGGCTGCCACCAGCGCCCACAGGCGAGCCGCTGCTGAAGCTCGGT CGACAGGCGCTTCTCGGTGAGTTAGGTTCGCCCCGTCGTTGCTTGCTGTC GAGACATGAAATCGTTGTCCATTTTTTGAAGTTCTCAACTGTTGCTTATG GACATCGCTCGTCGCGGGTTTTCCTTTACAGACCTTTTCCAAAAGCTAAC CAATAACAAGGTTGTGTGTATCATAGCACTGTGTACACCTGTCAACTTGG ACGGAAAAACGCTCGGAATTATTTGAAAGGTAATTCGCATGGGCTGAGGC CCGTCATGGACTACCAAACCATAGTCCCGCATTGGTGCTAGAGTGGTCGC AGGAGAATGTGGCCATTGGAGCGTAGGTAACGTTGTTGCAGGTGGCAAGA CCTGGGCCTGGAAATACAAATAGTTCATCTGGCTGTTTTCACGCCCTGTT GACGGCGCGTTCCATCAAAACATTTCAACACACACCAAACAAATGTTGCT CAATCGTAACCCGCATATCATGCTGCGACTGTCTGTCTGTCTGTCTTTCT GTCTGTCTGTCTGTCCGCATGTTGCTCGAATCAGGGTTGTGCTCCTCCTG CGTATCGGACTGCTGCAGCAACTCCATCCGGGTTGTCAAGACCACCAAGC AGACCGCACCAGTACCGGTGGGTTCCCTTTATGGCTTCCTATAGCTTCCA GAAGCGGGCTGGAGGTACCAGTACGGGGAAATAAACAGACAGCAGTCGGT ATGGTAAGATATGATATGACACAAGCGCCCGGGAACGGGCTACGCCATGG TACGGTCAAACTCGGACCGCGCGCGTAAGGGTGGCAGGCTCCACGTACGC TGGTAAATCGGGCAGAGTGCCGATGCACGGGCCGGTAGGCGTTGTTTCTC CCTCTGATGGTCGATTGTTACCTTTCTCACCCTCACGGGGTTGTGACTTC AGGAGCCCCACCCACCTGTCCACTCTTCGAACTCTGCCCTTCTCGCCAGT TCAGCACCAATGGTAAATGAGGTTTTCGATTTGGAGTGGCGATCTTTTGG AAACGTTTTTTTTTTTGCTCATTTGCCACGGAGTGTTGCACGAGAAAATC CCAAGTGCGACGTCGTGGGTCGGAGCCTATCCTTTCGCTGTGTATGATTA TCTCGCGGCCATGAACACCCATGATTGTACGTTCCGTTTACAAGTAGGTA AGAGTCTTTGCACCTCACTATGAATTCCCGCTCGGGAATAGAGCCTCGGG AGGACGAGACACTCGTGGTGGGGTTCCACACCCAAACCCTCCTCAAGACA GCAGTGCGGGTTGCGCGAAACCCAGTTGAATCGAACATGTTTCCAGTTTC ACAGCGGCGGCGGCGACGAAAGTTGCACTTGTACACTTGCTGGCACCACC AACGTGAAAAGGTACAGACAAAACCTCCCTCTCTCTGCCCTGGGGGACAA AAAAGAAGCCAGAGGGGAAGACGCGACCGACGACAACCTGAAGACACCCC CCTTTTTCCCTTGCGACCGTCGATTTGAAACGACTGCGACAGTTATCCTA CCCGGAGGCTTTAAAGCAGGTTGTGGACGAAGATGGCGTGCCGGGGCTGT TCTTACGAGGCCTCCAGACGCGAATTCTTGTCAACGCCCTCCAAGGTGCG CTGTTCGCGGTCGCATGGAAATATTTCCAGGAGCTGCTTCAGAGCAGCGG GAGCCCTTAAGAGAAAGGGATTCGTGGCACGGAGTATGCGTAGCCCAAAC GGTTTCTCGAGGTTTTCAAAAAATGAAAAAAGCTGGCGTTTTTTGGTCCA TCCCACCCTTCCCGATTCAGCGTACCCCCCCCCCTCCGTGCGTCTCGGTG ATTCTTTGGGAGAGTGTGGTGTGGCGTTCTGATGCAACTGTGTAGTGGGA AATATCCCGGAGTGTCGGCAAAATAAGAAATACAGTGCCTGGTGTCTGCA GTTTTCTTATCGGTCCCCACGTTTTTGCAAAAAACTTCTGATTGAAGAGT CAGCGTTTTATTTAGGGTGCCGAACAGCGAGTCGACTAGCCCCTCATGAC GTCGTGGTACACTTGCTGTGTGGTGTGCATGCTGCCTTGCTTGTGACGAT ATCCTGTTTTTATGGCTTGCTCTTCGATGGGTGTCTGCTGTAGGAGCTGG AAGTGCGACGGAGTATTGACGCAATGCCCTCCAGTCGATTTTGCTGCGCG AAGGCCGTCTAGGGTGGGATCCCTTTGCGGCGGTGTGGGAGGCTACCTCC CGGGCACTGATGTTTTTCCGTTTGCTCCTGGTGCTGCAGATGGTGAAATT GTGTGCTGACATGGTGCACTGTTTTGTGAGGGTATGAACGCTTACTGATT CCATTGGTATCGCAGCAGCAGTATGTGAGCGTTTTGTATCTCAAGGGACT GCCTTGTATGAATCGGAGCGTGCCGCCGTGTGGTGTTTTGGGGTGACAAA CTTAGAGGTTTTCGTGAAGCACGAGGCTTTCGCCTGTAGATAGGTATTGC TAAAAGACCGTCCGTCATGGTAAATCAGACAGAGGTACCGTCACGCCATC AAATGCTTTTTGTGGCGGGACTCCTGTCGTCCCAAGTATGTAGCCCTTCA CAACTTGTATTAGCGAATGCAAAGCACGCCTGGGGCTAGGATTATTGCGT GGGTTTATGTACATAAGACTGTTGACGAGCGTGGAAACACGTTTTCCCCA TGACAGCAATCGACTACCAGATTTTCTCCTGCCTGTACATGTAACTCCGG AAACCTCGGTTTTCTCTCGATTCTATGGGGGGCCGGCGATGGAACACCGA GAGTTGATTGATCTCAAATCATCCCCACCTGAGTATCCTCACCACCCTCG CCGAACACGTCAACCAACCAACAAGCACGCAATAATATCAGAGCGTCGAA ACGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig738:67852..73255-

>mRNA_P-littoralis_Contig738.12.4 ID=mRNA_P-littoralis_Contig738.12.4|Name=mRNA_P-littoralis_Contig738.12.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1362bp|location=Sequence derived from alignment at P-littoralis_Contig738:67852..73255- (Pylaiella littoralis U1_48)
ATGAATCGATGGACGAGCCTTGCTCTGTTGGCAAGCCCGATGGCGCCGCC
GTCGGCTGCTTTTCTCAACCCGACGTCTTGTGGACCATTTCAGCAACCCA
AGATTCAACAGCAACGACAACAGCCAACACGATCATCGCGAGGGCGCCCC
ATAACGGGACGAGAGTCCACGACTCAATTGAACGACGCATCCAACGTTCA
AGAAAAGCCACCACTACTACTACAACCAACAGCAACAGCAGCAGCAGCAG
CAGACGTGTGGAAACTGCCTCCGCTTTTCATAGCTTCTGGAGATGAGGCG
GCCCAGCATCAGCAGCATGATGACGAACGAGAAATTGACAGTCCCGCCAT
TACCACCGGACTGTCAATATTGAATATCGCTGCGACGGCAGCCGTGGTCA
TAGCGGTGGTGAACTACCTGGGACCTCTCGACGCTGCCTCTGCTGCTGCC
ACTACTTCCGTGAGCTCCGAGTTGGTAATAGCACAAGCAAGTGCGGCCCC
GGTTGACGTTGGAGCGATATTCGCGAAGGCGGGCAGTCGAGCGCTCGGCG
GTGGAGCGAGTGGGGCGGCGGCGGCGGTGGTCCAGGTGCTGTCTCTCATG
TGGCTGCGCACAACGATGAACTATCAGTACAAAAACGGCGGGTCTACCCA
AAACGCTCTAGCGACACTGTGGGAGGAAGGAGGCATTCCACGGCTCTACC
GAGGGGTTTCGTTCGCGTTGTTGCAAGGCCCCCTCAGCAGATTTGGAGAC
ACGGCCGCCAACGTGGGTGTGCTGGCCTTGCTCGAGGCTTTCGAGTCTAC
TAGAACACTGCCACTCCCAGTAAAGTCGGCGGCAGGGAGCCTCGCGGCAG
GCGTATGGCGCATTGGGCTCACGCCGATAGATGCCTACAAGACCACGTTA
CAGGTTTCAGGCGCAGAGGGCACCAAATTGCTCGCCGAAAAGGTGGCTGC
AAATGGGCCCACTGTGCTCTTCGAAGGAGCTCTGGCGACAGCCACGGCAA
CTTTTGTCGGTCATTACCCGTGGTATTTCACCTACAACTCCTTGGGAGCT
TGGCTGCCACCAGCGCCCACAGGCGAGCCGCTGCTGAAGCTCGGTCGACA
GGCGCTTCTCGGGTTGTGCTCCTCCTGCGTATCGGACTGCTGCAGCAACT
CCATCCGGGTTGTCAAGACCACCAAGCAGACCGCACCAGTACCGTTATCC
TACCCGGAGGCTTTAAAGCAGGTTGTGGACGAAGATGGCGTGCCGGGGCT
GTTCTTACGAGGCCTCCAGACGCGAATTCTTGTCAACGCCCTCCAAGGTG
CGCTGTTCGCGGTCGCATGGAAATATTTCCAGGAGCTGCTTCAGAGCAGC
GGGAGCCCTTAA
back to top