mRNA_P-littoralis_Contig73.60.11 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: A0A6H5JK18_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK18_9PHAE) HSP 1 Score: 923 bits (2386), Expect = 2.660e-315 Identity = 594/1229 (48.33%), Postives = 703/1229 (57.20%), Query Frame = 3
Query: 84 MECED-----AYIRQRAVSVVGGDEYVCPFLFDFLTVDELGRAAAVCRTWKASAEDDELWRQMYERTQVGETGMEDWARALAARPFGEDAVGWEVEVLSEDNATWQQGLVLEFSAGRYRVEYADGTSRWETEYRTEGPWHRRGNSRLYFSGRLHDTLADQGVGGGDGPAIAGVATTLGNPPVPPSADFGAAPASATVMRSGEQRGAPASSSLAWPRLRYGRWREELKANSCHVPAVELARLADHTDEVLDLKFSPDGTRLATCSRDMSILVYAIEDMPRHDTEEEEEGESDDQDGGTHRKPRAAVDGSGIHSTVRTAGDQNEAGGXXXXXXXXXXXXRSRFDGTHENREEMLHPLQYGRLGIRLIHRLRRSATASVCRIFWSPCSQFILSCLEEPHGNPFIPSSSELWDASSGQWLSRCRSQPFDVHAAWFPDGKHFVAGLNISWDETDETVPFSQILAIRRRPNIVSHRGGTAVPALSPTPMAEDRPGDGSNGXXXXXXXXXTTGAFCPHDGGKGNPTGETLGGSEAGWGLRAVPLGGTYS---GPND----ACAVDPAAACPAAESA---------------------------SEGVAWGEEALSLPSCVAASAASLSLLHLGAAAEQGDATMSDAADQFAGDDSNRRAGSSVAVPVAGAPGPENAAXXXXXXXXXXXXXXXTAARMAPHKASVETPGSVRHRALESTAQGILWVDPGLEGKGLPQEDTGSSGGDITAVVPG---RQPLG----ELQLPVPASAPSSGVDSSGAXXXXXXXXXXSLLKPRPPSAMMQNRGDGPDGDADAMAPERGGGEGGYSFIAADRPLHTPVQNQESWSPAVAALDAAGXXXXXXXXXMAGSPPADGISGGGGLFGFGLNVAEIPGMGPAVGGGSXXXXXXXXXXXXXXXGVEWVMEGGEAIAEADEADMPLVAEIQLRLTSNFAHFFQMSTSGLWACMATGDTPLMCHRIAFVPLVVQSSPTXXXXXXXXXXXXXXNPSASCADKATPLAAEVDADGCGGVGGEHDVFIRLARGGXXXXXXXXXXXXXXXXXXXHREQHVFATRMETVECGGAVLSLTVSRDDRFVMVNVRPFMKHTVENVQPIAGRNTEAPEISNEIEMQVWDVATKKILFKLGGHHAFTTKDCPFLILAAQSMADPFGDYMCSGSEEHRVFVWHLRHRLLLSVLKGHTDVVNSVSWNPKYPGLLASCGDDGKTIIWGPYVR 3632
MEC+ + R+RAVSVV GDEYVCPFLFDFLT+ ELGRAA+VC TW+ +A DDELWR +YERTQVGE GME+WA++LAARPF EDAVGWEVEVLSE++ W GLV+ +S GRY VEY DG+SRWE+EYRTEGPWHRRGNSR+ F GRLHD+LAD DG A A VA T +P PP + GA A ++GE R P WPRLR+GRWREE+KAN CHVPAVEL +L DHTDEVLDLKFSPDGT LATCSRDMSILVYAIE MP E + GG R PR A +G D D + + L PL + LG+RLIHRLRRSATASVCRIFWSPC +FILSCLEEP+GNPF PS+SELWDA GQ +SRCRSQPFDVHAAW PDG+HFVAGL+++WDETD+TVP++Q AIRRRP + RG T PA S + A + G GS A HD + L TY G D A D AAA AE + SEGV WGEEALS C+++S+++L+LLHLG A + A AG GS+V++PVA + GI+ VDPGLEGKG P + +S D TAV G R+ L + LP A+AP XXXXXX S P P + ++RG +AM P + + D P +Q + P+ A+ D +GG G F LNV VG + XXXXXXX GVEWVM+GGE IA+ D+A+MPLVAE++L L NFAHFFQMS SGLWAC+ATGDTP+MCHR+AF+PL+ ++ +P S D DG G E DVFI + R G + V A RME VECGGAVLSL+++RDDRF+MVNVRPFMK ++ + GR+T APEISNEIE+QVWDVATKK+ FKLGGHHAFTTKDCPFLI+AAQS ADPFGDY+CSGSEEHRVFVWHLRHRLLL VLKGH DVVNSVSWNPKYPG+++SC DDG IIWGP VR
Sbjct: 1 MECDSLMDSPGFCRRRAVSVVSGDEYVCPFLFDFLTISELGRAASVCSTWRTNAADDELWRDIYERTQVGEAGMEEWAQSLAARPFEEDAVGWEVEVLSEEDVMWTPGLVVAYSGGRYLVEYVDGSSRWESEYRTEGPWHRRGNSRISFLGRLHDSLADA-----DGGAAA-VANT--HPSAPPDSSRGAP---AAAEKAGETRSFP-----NWPRLRHGRWREEVKANCCHVPAVELVKLDDHTDEVLDLKFSPDGTLLATCSRDMSILVYAIEAMP--------ENHGSLKKGGKDRSPRKAR--AGXXXXXXXXXDTG-------------------VDEMPRDGQNKLRPLGFKGLGVRLIHRLRRSATASVCRIFWSPCGRFILSCLEEPNGNPFNPSTSELWDARHGQCISRCRSQPFDVHAAWMPDGEHFVAGLDLTWDETDDTVPYTQTFAIRRRPTPSTRRGST-TPASSASKAAIEAHGLGSG------MAIDANSARAGHDXXXXXXXXXDV---------EHRGLSNTYEYKRGRTDTTTAALTADLAAAXXPAEGSNVAGXXXXXXXXXXXXXHAEGRSAMGVSEGVGWGEEALSFSPCLSSSSSTLTLLHLGEAQQSASGVGDPAWGGKAGG-----GGSAVSLPVA----------------------------------------------AKGEVAGIMLVDPGLEGKGSPDQ---ASVTDETAVETGGGSREGLPAHDLSVSLPEEAAAPXX---XXXXXXXXXXTSFGSSCSPTPLEPVSRSRGGSSIEGEEAMQP--------WGCLGGDSPPAPLIQYP--FEPSAASGDGGH------------------ANGGEGGVLFDLNVG--------VGIAAVDDXXXXXXXENEEGGVEWVMQGGEVIAQVDDAEMPLVAEVRLNLRRNFAHFFQMSNSGLWACVATGDTPMMCHRVAFIPLMEATASPPKSTSTRPAAMSPGDPGGSDDD-----------DGSGN--DEKDVFIHVLRSGSGGDAASL-------------QPKVTARRMEAVECGGAVLSLSLTRDDRFIMVNVRPFMKGALDKLYRPEGRHT-APEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPRVR 1048
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: D7G5J6_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J6_ECTSI) HSP 1 Score: 751 bits (1938), Expect = 4.260e-249 Identity = 535/1217 (43.96%), Postives = 638/1217 (52.42%), Query Frame = 3
Query: 120 VSVVGGDEYVCPFLFDFLTVDELGRAAAVCRTWKASAEDDELWRQMYERTQVGETGMEDWARALAARPFGEDAVGWEVEVLSEDNATWQQGLVLEFSAGRYRVEYADGTSRWETEYRTEGPWHRRGNSRLYFSGRLHDTLADQGVGGGDGPAIAGVATTLGNPPVPPSADFGAAPASATVMRSGEQRGAPASSSLAWPRLRYGRWREELKANSCHVPAVELARLADHTDEVLDLKFSPDGTRLATCSRDMSILVYAIEDMPRHDTEEEEEGESDDQDGGTHRKPRAAVDGSGIHSTVRTAGDQNEAGGXXXXXXXXXXXXRSRFDGTHENREEMLHPLQYGRLGIRLIHRLRRSATASVCRIFWSPCSQFILSCLEEPHGNPFIPSSSELWDASSGQWLSRCRSQPFDVHAAWFPDGKHFVAGLNISWDETDETVPFSQILAIRRRPNIVSHRGGTAVPALSPTPMAEDRPGDGSNGXXXXXXXXXTT--------------------------------GAFCPHDGGKGNPTGETLGGSEAGWGLRAVPLGGT----YSGPNDACAVDPAAACPAAESASEGVAWGEEALSLPSCVAASAASLSLLHLGAAAEQGDATMSDAADQFAGDDSNRRAGSSVAVPVAGAPGPENAAXXXXXXXXXXXXXXXTAARMAPHKASVETPGSVRHRALESTAQGILWVDPGLEGKGLPQEDTGSSGGDITAVVPGRQPLGEL-------QLPVPASAPSSGVDSSGAXXXXXXXXXXSLLKPRPPSAMMQNRGDGPDGDADAMAPERGGGEGGYSFIAADRPLHTPVQNQESWSPAVAALDAAGXXXXXXXXXMAGSPPADGISGGGGLFGF--GLNVAEIPGMGPAVGGGSXXXXXXXXXXXXXXXGVEWVMEGGEAIAEADEADMPLVAEIQLRLTSNFAHFFQMSTSGLWACMATGDTPLMCHRIAFVPL-VVQSSPTXXXXXXXXXXXXXXNPSASCADKATPLAAEVDADGCGGVGGEHDVFIRLARGGXXXXXXXXXXXXXXXXXXXHREQHVFATRMETVECGGAVLSLTVSRDDRFVMVNVRPFMKHTVENVQPIAGRNTEAPEISNEIEMQVWDVATKKILFKLGGHHAFTTKDCPFLILAAQSMADPFGDYMCSGSEEHRVFVWHLRHRLLLSVLKGHTDVVNSVSWNPKYPGLLASCGDDGKTIIWGPYVR 3632
VSVVGGDEYVCPFLFDFLT+ ELGRAA+VC TW+ +A DDELWR++YERTQ GPWHRRGNSRL F GRLHD+LA Q GG A PP P+ APA+A ++GE R P WPRLR+GRWREELKAN CHVPAVEL +L DHTDEVLDLKFSPDGTRLATCSRDMSILVYAIE MP + +E GE DD RK RA+ D+ G + L PL + LG+RLIHRLRRSATASVCRIFWSPC +FILSCLEEPHGNPFIPSSSELWDA GQ LSRCRSQPFDVHAAW PDG+HFVAGL+++WDETD+TVP++Q AIRRRP ++ RGG+ PA S + A + G G G H+ +G+ T + A P G+ S P+ A A P+A SEGV WGEEA+S SC+++S+++L+LLHLG A + A AG+ GS+ ++PV+ G V GI+WVDPGLEGKG P + +S D TAV G P EL LP + +G XXXXXX S P P + + G +G+ + M P + + D H Q + P+ ++GXXXXXXXXX G GLF G+ +A + G XXXXXXXXXX GVEWVM+GGE IA+ D+ + + FF S SG WAC+ATGDTP+MCHR+AF+PL ++SP P+A P ++ E DVFIR+ R G + V A RME VECGGAVLSL+V+RDDRF+MVNVRPFMK ++ + GR+T APEISNEIE+QVWDVATKK+ FKLGGHHAFTTKDCPFLI+AAQS ADPFGDY+CSGSEEHRVFVWHLRHRLLL VLKGH DVVNSVSWNPKYPG+++SC DDG IIWGP VR
Sbjct: 3 VSVVGGDEYVCPFLFDFLTISELGRAASVCSTWRTNAADDELWREIYERTQ--------------------------------------------------------------------GPWHRRGNSRLSFLGRLHDSLAGQDADGG-------AAAVSNTPPSTPADSSRGAPAAAE--KAGETRSFP-----DWPRLRHGRWREELKANCCHVPAVELVKLDDHTDEVLDLKFSPDGTRLATCSRDMSILVYAIEAMPENHGSSKE-GEKDD----GPRKARASGXXXXXXXXXXXGVDEMPRDG-----------------------QNKLRPLGFKGLGVRLIHRLRRSATASVCRIFWSPCGRFILSCLEEPHGNPFIPSSSELWDAWHGQRLSRCRSQPFDVHAAWMPDGEHFVAGLDLTWDETDDTVPYTQTFAIRRRPTPIT-RGGSTAPASSASKAALEAHGLGGGMAISAISANAARLEQDSIAXXXXXXXXXXXXXXXXXXXXGVEHRGLSSTHEHKRGSID-TTAAALTDDFAAAAAPAEGSNVAGVSKPSAAXXXXGHAEGPSAMGVSEGVGWGEEAMSFSSCLSSSSSTLTLLHLGEAQQSATGVGDPAGGGKAGE-----GGSAASIPVSAT-------------------------------------GEVA---------GIMWVDPGLEGKGSPAQ---ASVTDETAVESGGGPREELPAHDMSVSLPEEEAVAPAGAXXXXXXXXXXXPSFGSPFSPPPLEPVSSHGGSSNEGE-ETMQP--------WGCLGGDS--HPTPLIQYPFEPSA----SSGXXXXXXXXXXXG-----------GLFDLNVGVGIAAVEGX---------XXXXXXXXXXDEEGGVEWVMQGGEVIAQVDDGGDAAGRRGSAQPSQELRAFFP-SNSGSWACVATGDTPMMCHRVAFIPLGEARASPPKSTST---------RPAA--ISPGDPGVSDXXXXXXXXXXXEKDVFIRVLRSGSGGDAASL-------------QPKVTARRMEAVECGGAVLSLSVTRDDRFIMVNVRPFMKGALDKLHRPEGRHT-APEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPRVR 992
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: A0A7S2FQF2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FQF2_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.120e-31 Identity = 69/171 (40.35%), Postives = 98/171 (57.31%), Query Frame = 3
Query: 3165 VECGGAVLSLTVSRDDRFVMVNVRPFMKHTVENVQPIAGRNTEAPEISNEIEMQVWDVATKKILFKLGGHHAFTTKDCPFLIL-----------------AAQSMADPFG-DYMCSGSEEHRVFVWHLRHRLLLSVLKG-HTDVVNSVSWNPKYPGLLASCGDDGKTIIWG 3620
++C +LSL +S D FV VN RPF+ + + + + AP+IS ++++QVW+++++ + L GH FTTK+CPFL+ A A F DY+CSGSE V +WHLRH+ L+++L G HTDVVNSVSWN +LAS DD IWG
Sbjct: 63 IDCVAVILSLRISEDGCFVFVNTRPFLDDSYKPPFKVPPEHLPAPDISTKVQLQVWEISSRTKVMTLTGHRGFTTKECPFLLFTDEGGHTRNTTAAGNQNAGADAAIVFSRDYICSGSECAAVHIWHLRHQRLITMLSGGHTDVVNSVSWNRHVDAMLASASDDQTVCIWG 233
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: A0A813J8U8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J8U8_POLGL) HSP 1 Score: 116 bits (290), Expect = 2.470e-24 Identity = 87/259 (33.59%), Postives = 120/259 (46.33%), Query Frame = 3
Query: 159 LFDFLTVDELGRAAAVCRTWKASAEDDELWRQMYERTQVGETGM----EDWARALAARPFGEDAVGWEVEVLSEDNAT-WQQGLVLEF--SAGRYRVEYAD------GTSRWETEYRTEGPWHRRGNSRLYFSGRLHDTLADQGVGGGDGPAIAGVATTLGNPPVPPSADFGAAPASATVMRSGEQRGAPASSSLAWPRLR--YGRWREELKANSCHVPAVELARLADHTDEVLDLKFSPDGTRLATCSRDMSILVYAI 890
+F F V +LG A R+WKA A+ +W Y+RTQ + E R+L RPFGEDAVGWEV VL ED + + G ++ + Y V+Y G RWE E R R N L R + +PP P +A G+ SSS + PRL +G W++EL+ N C+ P+ L RL +H DEVL + FSP GTRLA+CSRD+ +++ +
Sbjct: 38 IFRFCGVQDLGACLAADRSWKAVADAHHVWADAYDRTQCVDASSAPNGEGLLRSLIERPFGEDAVGWEVAVLIEDGSERYSTGHIVAYRPEIDSYLVDYGSSSGLPGGDRRWEQERRKRTAAMRH-NPSLLGKSRFNFL----------------------SPPKPLAATGGS------------------SSSSSLPRLAGCHGSWKQELEHNVCNAPSRLLTRLLEHKDEVLFVVFSPCGTRLASCSRDLRTVIFKV 255
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: A0A812UCT2_SYMPI (PAP13 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UCT2_SYMPI) HSP 1 Score: 115 bits (288), Expect = 4.510e-24 Identity = 91/250 (36.40%), Postives = 129/250 (51.60%), Query Frame = 3
Query: 159 LFDFLTVDELGRAAAVCRTWKASAEDDELWRQMYERTQ-VGETGM---EDWARALAARPFGEDAVGWEVEVLSEDNATWQQGLVLE-FSAGRYRVEYADGTSRWETEYRTEGPWHRRGNSRLYFSGRLHDTLADQGVGGGDGPAIAGVATTLGNPPVPPSADFGAAPASATVMRSGEQRGAPASSSLAWPRLRYGRWREELKANSCHVPAVELARLADHTDEVLDLKFSPDGTRLATCSRDMSILVYAIE 893
+F F ++ +LG + AV R W+A+ + +W Y+RTQ V ++ E+ R+L RPFGEDAVGW V VL+ED+ G E + AGR V Y+ T + Y TEG + N + R T A + P++AG + P P GAA +S+ Q+ P LR G W+EELK N P L +L DH+DEVL + FSP GTRLA+CSRD+ +V+ ++
Sbjct: 29 IFRFCSIRDLGASLAVDRHWRAAVDSHHVWADAYDRTQRVDDSSAPSGENLLRSLIERPFGEDAVGWHVAVLAEDH-----GYSTERYYAGRV-VAYSVETDTYLIAYDTEGAQADQPNMH-WEQERRKRTAAMR-----HNPSLAGKSRFSFLSPPPHLPKSGAAYSSSVAHAEPSQKVRARDERSREP-LR-GSWKEELKHNVLQAPTQMLTQLNDHSDEVLFVVFSPCGTRLASCSRDLQTIVFKVQ 264
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: A0A813B4T2_SYMMI (Wdr26 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813B4T2_SYMMI) HSP 1 Score: 117 bits (292), Expect = 1.300e-22 Identity = 87/256 (33.98%), Postives = 128/256 (50.00%), Query Frame = 3
Query: 159 LFDFLTVDELGRAAAVCRTWKASAEDDELWRQMYERTQ-VGETGM---EDWARALAARPFGEDAVGWEVEVLSED----NATWQQGLVLEFSA--GRYRVEYADGTSRWETEYRTEGP-WHRRGNSRLYFSGRLHDTLADQGVGGGDGPAIAGVATTLGNPPVPPSADFGAAPASATVMRSGEQRGAPASSSLAWPRLRYGRWREELKANSCHVPAVELARLADHTDEVLDLKFSPDGTRLATCSRDMSILVYAIE 893
+F F ++ +LG + AV R W+A+ + +W Y+RTQ V ++ ED R+L RPFGEDAVGW V VL+ED N + G V+ +SA Y + Y ++E + + P H R + H+ P++AG + P P GA +S+T Q+ A LR G W+EELK N P L +L +H+DEVL + FSP GTRLA+CSRD+ +V+ ++
Sbjct: 341 IFRFCSIRDLGASLAVDRNWRAAGDSHHVWADAYDRTQRVDDSSAPSGEDLLRSLIERPFGEDAVGWHVAVLAEDHGYSNERYYTGRVVAYSAETDTYLIAY-------DSEGQEDQPHMHWEQERRKRTAAMRHN------------PSLAGKSRFSFLSPPPHLPKSGAVSSSSTASAGPLQKAARPRDERPREPLR-GSWKEELKHNVLQAPTHMLTQLNEHSDEVLFVVFSPCGTRLASCSRDLQTIVFKVQ 576
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: A0A7S0B5Y1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0B5Y1_9DINO) HSP 1 Score: 104 bits (260), Expect = 7.860e-21 Identity = 84/280 (30.00%), Postives = 125/280 (44.64%), Query Frame = 3
Query: 114 RAVSVVGGDEYVCPFL-------FDFLTVDELGRAAAVCRTWKASAEDDELWRQMYERTQVGETGM----EDWARALAARPFGEDAVGWEVEVLSEDNAT-WQQGLVLEFSA--GRYRVEY---ADGT----SRWETEYRTEGPWHRRGNSRLYFSGRLHDTLADQGVGGGDGPAIAGVATTLGNPPVPPSADFGAAPASATVMRSGEQRGAPASSSLAWPRLRYGRWREELKANSCHVPAVELARLADHTDEVLDLKFSPDGTRLATCSRDMSILVYAI 890
R S + D+++ L F F +V +LG +V + W + +W YERTQ ++ E RAL RPFGEDAVGW V VL ED + G ++ ++A Y + Y +DG+ WE E R R S +G+ + PP+ D+ + G + SS WP LR+ W++EL+ N + P+ L RL +H DEVL + FSP GTRLA+CSRD+ +++ +
Sbjct: 21 RRPSALAADQFILDVLDPAWLDVFRFCSVPDLGACLSVSKCWHNVTDAHHVWADAYERTQRVDSASAPAGEGELRALIERPFGEDAVGWRVAVLVEDGTERYATGHIVSYNAEADAYLIAYEEESDGSRSPREAWEQERRKRTAAMRHNPS---LAGKSRFSFLS-----------------------PPALDW------RQPLGGLTPHGRSSGSSRRWP-LRFRSWKQELENNVRNAPSRLLLRLEEHADEVLFVVFSPCGTRLASCSRDLRTVIFRV 267
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: A0A812MSZ5_9DINO (WDR26 protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812MSZ5_9DINO) HSP 1 Score: 104 bits (259), Expect = 2.580e-20 Identity = 60/163 (36.81%), Postives = 87/163 (53.37%), Query Frame = 3
Query: 3183 VLSLTVSRDDRFVMVNVRPFMKHTVENVQPIAGRNTE------------------APEISNEIEMQVWDVATKKILFKLGGHHAFTTKDCPFLILAAQSMADPFGDYMCSGSEEHRVFVWHLRHRLLLSVLKGHTDVVNSVSWNPKYPGLLASCGDDGKTIIW 3617
VLS + F+++N RP+ H V Q G++ AP++S ++E+ + D T ++ GH AFTTK+ PFLI + +D D++ SG E+HRV++WH RH L+ L GH + VN+VSWN + GLLAS DD IIW
Sbjct: 141 VLSAKWNEAGDFILLNTRPYA-HAVSGSQKTGGQSEASQASLQAGASFEDLLLRPAPDLSTKMELLLLDARTLDVVSVFDGHFAFTTKESPFLIFT-EEWSD--SDFLASGGEDHRVYIWHRRHGRLIRRLCGHAEPVNAVSWNGR--GLLASASDDNGIIIW 297
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: A0A813IYS7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IYS7_POLGL) HSP 1 Score: 100 bits (250), Expect = 1.350e-19 Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 3
Query: 3294 APEISNEIEMQVWDVATKKILFKLGGHHAFTTKDCPFLILAAQSMADPFGDYMCSGSEEHRVFVWHLRHRLLLSVLKGHTDVVNSVSWNPKYPGLLASCGDDGKTIIW 3617
AP++S +E+ + D + I+ GH AFTTK+ PFLI + D++ SG E+HRV+VWH RHR L+ L GHT+ VN+VSWN GLLAS DD + IIW
Sbjct: 156 APDLSTTMELLLLDANSLDIIGLFDGHFAFTTKESPFLIFTDEWANS---DFLASGGEDHRVYVWHRRHRRLIRRLCGHTEPVNAVSWNGN--GLLASASDDKQIIIW 258
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Match: A0A0G4GZR2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZR2_VITBC) HSP 1 Score: 106 bits (265), Expect = 2.360e-19 Identity = 72/241 (29.88%), Postives = 104/241 (43.15%), Query Frame = 3
Query: 3165 VECGGAVLSLTVSRDDRFVMVNVRPFMKHT---VENVQPIAGRNTEAPEISNEIEMQVWDVATKKILFKLGGHHAFTTKDCPFLILA----------------------------------------------------AQSMAD--------------------PFG------------DYMCSGSEEHRVFVWHLRHRLLLSVL-KGHTDVVNSVSWNPKYPGLLASCGDDGKTIIWGP 3623
++ VL+L V++D +F++VN RPF + + ++ P++ + +E+ ++ + T + L GH AFTTK CPFLI A +M D P G D++ SGSE+HRV+VWH+RH+ L+S+L GHTDVVNSVSWN PGLLASCGD+G +W P
Sbjct: 1021 IDARAGVLTLRVTQDGQFLLVNCRPFEGSQYLRLRLLDRLSAVRQPKPDLKSAMEVHIYHIPTLTKVAVLKGHVAFTTKACPFLINLMEGGPGPDLPFPPIHHTRDTHDHPAXXXXXXXXXXXXXXXXXXXXXXXXXRDADAMMDQDEPSDGQEPSSSCVEGARRPAGVCGQQQPPWRCYDFVASGSEDHRVYVWHMRHQRLVSILANGHTDVVNSVSWNSGVPGLLASCGDEGHVCLWSP 1261 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig73.60.11 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig73.60.11 >prot_P-littoralis_Contig73.60.11 ID=prot_P-littoralis_Contig73.60.11|Name=mRNA_P-littoralis_Contig73.60.11|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1184bp MECEDAYIRQRAVSVVGGDEYVCPFLFDFLTVDELGRAAAVCRTWKASAEback to top mRNA from alignment at P-littoralis_Contig73:334270..347564- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig73.60.11 ID=mRNA_P-littoralis_Contig73.60.11|Name=mRNA_P-littoralis_Contig73.60.11|organism=Pylaiella littoralis U1_48|type=mRNA|length=13295bp|location=Sequence derived from alignment at P-littoralis_Contig73:334270..347564- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig73:334270..347564- >mRNA_P-littoralis_Contig73.60.11 ID=mRNA_P-littoralis_Contig73.60.11|Name=mRNA_P-littoralis_Contig73.60.11|organism=Pylaiella littoralis U1_48|type=CDS|length=3552bp|location=Sequence derived from alignment at P-littoralis_Contig73:334270..347564- (Pylaiella littoralis U1_48)back to top |