mRNA_P-littoralis_Contig726.23.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 279 bits (713), Expect = 2.340e-82 Identity = 166/273 (60.81%), Postives = 189/273 (69.23%), Query Frame = 2
Query: 308 RGTAVLLTPSYNNKGYLMDLGLTLADEQHLPASKKHLAPTTETDAEAKYNRRWAEIKAWAVKAALKANSRAASSGSGGQSSSKRPRMMDFTPRAK-EPRFASYGRGGPRRSTED-GEGVDSEDSEEQQLSLLVDAEIERYNALYIRADELDTRDILPWWRETGRKMFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFTGARDADLNAAEAALDVVNNTAN-DIGV 1117
R +VLLTPSY + +L LT AD QHL K HLAPT +T+ + K N WA+IKA A +AA K +S A ++ GGQ KR TP K PRFAS R R TED GEG DSE++ L V E+ER+ ALY+ A+ELDTR++LPWWR TGRKMFP LAPVAQQV GNQAGAAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KD PMIA KDIR CLP +F G DADL AAEA DV+ NT N DIGV
Sbjct: 358 RNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHS-ARATAEGGQPPLKRL----STPATKARPRFASLARNRVRGDTEDVGEG----DSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG-DADLAAAEATFDVIENTNNSDIGV 620
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 253 bits (647), Expect = 2.610e-76 Identity = 146/273 (53.48%), Postives = 187/273 (68.50%), Query Frame = 2
Query: 308 RGTAVLLTPSYNNKGYLMDLGLTLADEQHLPASKKHLAPTTETDAEAKYNRRWAEIKAWAVKAALKANSRAASSGSGGQSSSKRPRMMDFTPRA-KEPRFASYGRGGPRRSTEDGEGVDSEDSEEQQLSLLVDAEIERYNALYIRADELDTRDILPWWRETGRKMFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFTGARDADLNAAEAALDVVNNTA----NDI 1111
R AVLLTP +N YL L L+ AD ++L KK LAPT +++ AK + WA+IK A +AA + N R+ S G Q KR R T A ++ RF+ +GRG R ST+D + EDSE+++L +V E+E Y +L+I+ADELD R++LPWW+ TG+ +FP+LAPVAQQVFGNQA +QVERDFS G LL PNRSR+DTYWVE++MFL N+ HIP LK PM+A K+IR CLPA+F G RDADL AAEA DV+ NTA NDI
Sbjct: 42 RDAAVLLTPPFNTGKYLEALRLSAADAEYLSIGKKGLAPTMDSEVTAKLDGCWADIKRRAWEAARERNRRSESLDDGVQPLHKRFRGESSTSSATRKSRFSLFGRGDARSSTDD---MADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHG-RDADLMAAEAIFDVLMNTAPPSVNDI 310
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 213 bits (541), Expect = 6.980e-62 Identity = 105/137 (76.64%), Postives = 115/137 (83.94%), Query Frame = 2
Query: 710 IERYNALYIRADELDTRDILPWWRETGRKMFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFTGARDADLNAAEAALDVVNNTAN-DIGV 1117
I+R+ ALY+ A+ELDTR++LPWWR TGRKMFPYLAPVAQQV GNQAGAAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KD PMIA KDIR CLP +F G DADL AAEAA DV+ NT N DIGV
Sbjct: 87 IDRFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG-DADLAAAEAAFDVIENTNNSDIGV 222
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 208 bits (530), Expect = 2.530e-61 Identity = 101/138 (73.19%), Postives = 112/138 (81.16%), Query Frame = 2
Query: 686 LSLLVDAEIERYNALYIRADELDTRDILPWWRETGRKMFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFTGARDADLNAAEAALDVVNNT 1099
L V EIERY++LYI A+ELDTR+ILPWWR+TGRK FPYLAPVAQQVFGNQAGAAQVERDFS C NLL NRSR+DTYWVEM+MFL N++HIP KD PMIA KDI CLP +F G DADL AAEAA DV+ NT
Sbjct: 4 LMQHVSQEIERYHSLYITAEELDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNGG-DADLAAAEAAFDVIKNT 140
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 181 bits (458), Expect = 6.030e-45 Identity = 115/265 (43.40%), Postives = 153/265 (57.74%), Query Frame = 2
Query: 317 AVLLTPSYNNKGYLMDLGLTLADEQHLPASKKHLAPTTETDAEAKYNRRWAEIKAWAVKAALKANSRAASSGSGGQSSSKRPRMMDFTPRAKE---PRFASYGR--GGPRRSTEDGEGVDSEDSEEQQLSLLVDAEIERYNALYIRADELDTRDILPWWRETGRKMFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFTGARDADLNAAEAALDVVNN 1096
A LLTP ++ ++ + L D+++LP++ APT + + AK + W EIK AV+A +K AASSG G KR R R + FA++GR GG S + G+ V+ E V EI RY +++ +++L ++L +W TGR FP L VAQQ FG+Q AA VERDFS CG LVPNRSR++ YWVEM+MFL N+K IP + P I KDIRKCLPAKF G D DL +AE ALD + N
Sbjct: 590 ACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEA-VKKEQAAASSGPGAAGVFKRARTAGXXXRRRPVDGDEFAAFGRSVGGVEESKQ-GDAVEQE----------VANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGT-DEDLLSAEMALDPLRN 841
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.170e-44 Identity = 84/108 (77.78%), Postives = 88/108 (81.48%), Query Frame = 2
Query: 797 MFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFTGARDADLNAAEAALDVVNNTAN-DIGV 1117
MFPYLAPVAQQV GNQAGAAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KD PMIA KDIR CLP +F G DADL AAEAA DV+ N N DIGV
Sbjct: 1 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG-DADLAAAEAAFDVIENINNSDIGV 107
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.240e-39 Identity = 105/246 (42.68%), Postives = 137/246 (55.69%), Query Frame = 2
Query: 317 AVLLTPSYNNKGYLMDLGLTLADEQHLPASKKHLAPTTETDAEAKYNRRWAEIKAWAVKAALKANSRAASSGSGGQSSS--KRPRMMDFTPRAK---EPRFASYGRGGPRRSTEDGEGVDSEDSEEQQLSLLVDAEIERYNALYIRADELDTRDILPWWRETGRKMFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFT 1039
A LLTP ++ YL + LT ++ +L A +APT++ D K WAEIK AV A +R A G GGQ S KR R P + E F+ +G S DG VD + E V EI RY ++++ +L D+L +W + G++MFP L VAQQ FG+QA AAQ+ERDFS CG NRSR + YW+EM+M LK NY+ IP KD P I KDIRKCLPAK++
Sbjct: 346 ACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEG-GGQGSDPFKRARTSGAVPSRRKNYEDDFSMFGCNEVAPSQSDGGDVDFVEEE-------VSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKYS 583
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE) HSP 1 Score: 151 bits (382), Expect = 1.120e-37 Identity = 95/173 (54.91%), Postives = 107/173 (61.85%), Query Frame = 2
Query: 605 ASYGRGGPRRSTED-GEGVDSEDSEEQQLSLLVDAEIERYNALYIRADELDTRDILPWWRETGRKMFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFTGARDADLNAAEAALDVVNNTAN-DIGV 1117
+S G+ R T+D GEG DSE++ L V E+ER+ ALY+ A E V GNQAGAAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KD PMIA KDIR CLP +F G DADL AAEAA DV+ NT N DIGV
Sbjct: 183 SSLGKNRVRGDTKDVGEG----DSEDKVLMQQVSQELERFQALYMTAGE---------------------------VLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIRTCLPPRFNGG-DADLAAAEAAFDVIENTNNSDIGV 323
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 154 bits (388), Expect = 6.160e-37 Identity = 105/266 (39.47%), Postives = 145/266 (54.51%), Query Frame = 2
Query: 314 TAVLLTPSYNNKGYLMDLGLTLADEQHLPASKKHLAPTTETDAEAKYNRRWAEIKAWAVKAALKANSRAASSGSGGQSSS--KRPRMM---DFTPRAKEPRFASYGRGGPRRSTEDGEGVDSEDSEEQQLSLLVDAEIERYNALYIRADELDTRDILPWWRETGRKMFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFTGARDADLNAAEAALDVVNN 1096
++ LLTP Y++ ++ + LT + +LP L PTT+ D E K W IK A++A + ++A SG GG + KR R A E FA G + G+ D L V EI+R AL + + +L RD+L +W+++GR FP L VAQQ FG+QA AAQ+ERDFS G L NR+R+D YWVEM++FLK N++ IP D P + K IR+CLPAKF G + L+A E ALD + N
Sbjct: 242 SSCLLTPPYSSGIHISAMKLTEEEGDYLPTGLTVLTPTTDEDVEDKKAEAWGMIKKRAIQAVKEDQAQANGSGDGGGDAGPFKRARTSGNGSARNDAGEDHFAVLCTAGAVEQSGSGDDGD----------LSVAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKGTNEYLLDA-EMALDPLEN 496
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.470e-33 Identity = 100/264 (37.88%), Postives = 131/264 (49.62%), Query Frame = 2
Query: 317 AVLLTPSYNNKGYLMDLGLTLADEQHLPASKKHLAPTTETDAEAKYNRRWAEIKAWAVKAALKANSRAASSGSGGQSSSKRPRMMDFTPRAKEPRFASYGRGGP--RRSTEDGEGVDSEDSEEQQLSLLVDAEIERYNALYIRADELDTRDILPWWRETGRKMFPYLAPVAQQVFGNQAGAAQVERDFSACGNLLVPNRSRIDTYWVEMLMFLKVNYKHIPALKDTPMIADKDIRKCLPAKFTGARDADLNAAEAALDVVNNTA 1102
A LLTP ++ ++ + LT D +LP S +APT + + AK + W EI+ AV++ RA S +GG GGP R T G + ++ A +E R ++L +W TG+ FP L VAQQ FGNQA AA VERDFS CG +VPNRSR+D YWVEM+MFLK N+ + + P I KDIRKCLPAKF G + LNA E AL ++N A
Sbjct: 268 ACLLTPPFSEGRHVSAMRLTAEDAMYLPNSSNIIAPTADFEVTAKLDWAWTEIRKRAVESVKTEQDRAGGSDAGGG-------------------------GGPFKRAHTSGGRSARNPTDPDEFTDSGRTAAVEEAR----RMTSCSRSEVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRI-NIPQIDPKDIRKCLPAKFEGTDEDHLNA-EMALYPLSNDA 500 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig726.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig726.23.1 >prot_P-littoralis_Contig726.23.1 ID=prot_P-littoralis_Contig726.23.1|Name=mRNA_P-littoralis_Contig726.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=254bp MDLGLTLADEQHLPASKKHLAPTTETDAEAKYNRRWAEIKAWAVKAALKAback to top mRNA from alignment at P-littoralis_Contig726:128679..130686- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig726.23.1 ID=mRNA_P-littoralis_Contig726.23.1|Name=mRNA_P-littoralis_Contig726.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2008bp|location=Sequence derived from alignment at P-littoralis_Contig726:128679..130686- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig726:128679..130686- >mRNA_P-littoralis_Contig726.23.1 ID=mRNA_P-littoralis_Contig726.23.1|Name=mRNA_P-littoralis_Contig726.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=762bp|location=Sequence derived from alignment at P-littoralis_Contig726:128679..130686- (Pylaiella littoralis U1_48)back to top |