mRNA_P-littoralis_Contig716.8.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: A0A6H5KTK2_9PHAE (VOC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK2_9PHAE) HSP 1 Score: 236 bits (601), Expect = 4.870e-71 Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 3
Query: 102 MRARSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFETGGTPLVLKAAASEAACSVGYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 461
MRARSVILLIRDVGKGV FYGEGGLGLAL+HSSDTMAEFETGGTPLVLK AASEAACSVGYSPLLCFDVPDMDHAVQRAL MGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL
Sbjct: 1 MRARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFETGGTPLVLKMAASEAACSVGYSPLLCFDVPDMDHAVQRALGMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 120
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: W7TYR3_9STRA (VOC domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYR3_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.510e-39 Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 3
Query: 111 RSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFETGGTPLVLKAAASEAACSVGYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQP 443
R+V+L++RD+ V FYG+ GLGLAL SD AEF+TGGTPLVLK A EA CS GYSPLLCFDV DMD + R L +G LDGPIKYP +G + IRSPDGHM+GLF+P
Sbjct: 9 RNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVADGEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEP 119
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: A0A8K1CQB9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQB9_PYTOL) HSP 1 Score: 134 bits (337), Expect = 2.220e-33 Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = 3
Query: 102 MRARSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFET-GGTPLVLKAAASEAACSVGYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 461
MR R V++L RD+ + FY EG LGL L SSDT AEF+T PL +K A SEAACS GYSP L FD+ D+ AV R L++G +DGPIKYPAHG VA++RSPDG M+GL++P+ E +
Sbjct: 1 MRLRQVLVLSRDLARSTQFYQEG-LGLKLLRSSDTFAEFDTRSSVPLCVKLAQSEAACSTGYSPFLNFDIQDLSEAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPNSWENV 120
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: D0NG00_PHYIT (VOC domain-containing protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=D0NG00_PHYIT) HSP 1 Score: 134 bits (337), Expect = 2.280e-33 Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = 3
Query: 105 RARSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFET-GGTPLVLKAAASEAACSVGYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 461
R R +++L RD+ + FY EG LGL L SSDT AEF+T G PL +K A SEAACS GYSP L FD+PD+ AV R L++G +DGPIKYPAHG VA++RSPDG M+GL++P+ E +
Sbjct: 3 RLRQLMVLSRDLARSKQFYQEG-LGLKLLRSSDTYAEFDTQAGVPLCIKLAQSEAACSSGYSPFLNFDIPDLSDAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPNSWENV 121
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: K3WVE3_GLOUD (VOC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVE3_GLOUD) HSP 1 Score: 132 bits (332), Expect = 1.070e-32 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 3
Query: 102 MRARSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFET-GGTPLVLKAAASEAACSVGYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 461
MR R V++L RD+ + F+ EG LGL L SSDT AEF+ G PL +K A +EAACS GYSP L FD+ D+ V R L+MG +DGPIKYPAHG VA+IRSPDG M+GL++P+ E +
Sbjct: 1 MRLRQVLILSRDLARSTRFFQEG-LGLKLLRSSDTFAEFDIKAGVPLCIKLAQNEAACSTGYSPFLNFDIQDLSDTVPRLLMMGAIMDGPIKYPAHGKVAAIRSPDGVMIGLYEPNSWENV 120
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: D8LGD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD4_ECTSI) HSP 1 Score: 130 bits (327), Expect = 1.420e-32 Identity = 62/67 (92.54%), Postives = 62/67 (92.54%), Query Frame = 3
Query: 270 CSV---GYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 461
CSV YSPLLCFDVPDMDHAVQRAL MGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL
Sbjct: 14 CSVLLSRYSPLLCFDVPDMDHAVQRALGMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 80
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: A0A7S2RR76_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RR76_9STRA) HSP 1 Score: 130 bits (326), Expect = 7.540e-32 Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 3
Query: 102 MRARSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFETG---GTPLVLKAAASEAACSVGYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQ 440
+R R V++L RDVG+ + FYG GLGL +R +SD+ AEF+ G GT L+ EA CS GYSP+L FDV DMD + R +++GG LDGPIKYP HG +AS+RSP+G M+GLF+
Sbjct: 2 IRFRRVLVLTRDVGECLNFYGSEGLGLRVRFASDSYAEFDCGDKHGTTFALQKVEREAECSTGYSPMLHFDVEDMDSLIGRLIMLGGRLDGPIKYPVHGKLASLRSPNGQMIGLFE 117
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: A0A5D6XRH0_9STRA (VOC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRH0_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.410e-31 Identity = 63/121 (52.07%), Postives = 84/121 (69.42%), Query Frame = 3
Query: 102 MRARSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFET-GGTPLVLKAAASEAACSVGYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 461
MR R V++L RDV + F+ EG LGL L +SDT AEF+T G L +K A +EAACS GYSP L FD D+ + R L++G +DGPIKYPAHG VA++RSPDG M+GL++P+ + +
Sbjct: 1 MRLRQVLILSRDVARSTQFFQEG-LGLKLLRASDTFAEFDTQSGAALCIKLAQNEAACSAGYSPFLNFDTQDLSDTIPRLLMLGAIMDGPIKYPAHGKVAAVRSPDGVMIGLYEPNSWDNV 120
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: A0A6A5BKG1_NAEFO (VOC domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BKG1_NAEFO) HSP 1 Score: 126 bits (316), Expect = 1.850e-30 Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = 3
Query: 111 RSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFETGGTPLVLKAAASEAACSVGYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQ 440
++++LLI+DV K V FY EG LG+ + H S+ AE ++G + L EAAC+ GYSP LCFDV MD + + + MG LDGPIKYP+HG VAS+RSPDGHM+GLF+
Sbjct: 9 KNIMLLIKDVPKSVKFYSEG-LGMQVNHVSEHWAELQSGQMKVCLNKVEGEAACTTGYSPFLCFDVTQMDKTIYKLIEMGAVLDGPIKYPSHGKVASLRSPDGHMLGLFE 117
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Match: A0A484DRS8_BRELC (VOC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRS8_BRELC) HSP 1 Score: 124 bits (312), Expect = 9.310e-30 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 3
Query: 105 RARSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFET-GGTPLVLKAAASEAACSVGYSPLLCFDVPDMDHAVQRALVMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQPDDQEGL 461
R R V++L RD+ + FY E GLGL L SS+T AE++ G PL +K A SEAACS GYSP L FD+ D+ AV R L+MG +DGPIKYP HG VA++RSPDG M+GL++P+ + +
Sbjct: 18 RLRQVLVLSRDLARSKQFY-EKGLGLKLLRSSETYAEYDIRAGVPLCIKLAQSEAACSSGYSPFLNFDIRDLCEAVPRMLMMGAIMDGPIKYPVHGKVAALRSPDGVMIGLYEPNSWDNV 136 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig716.8.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig716.8.2 >prot_P-littoralis_Contig716.8.2 ID=prot_P-littoralis_Contig716.8.2|Name=mRNA_P-littoralis_Contig716.8.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=121bp MRARSVILLIRDVGKGVAFYGEGGLGLALRHSSDTMAEFETGGTPLVLKAback to top mRNA from alignment at P-littoralis_Contig716:46950..54896+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig716.8.2 ID=mRNA_P-littoralis_Contig716.8.2|Name=mRNA_P-littoralis_Contig716.8.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7947bp|location=Sequence derived from alignment at P-littoralis_Contig716:46950..54896+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig716:46950..54896+ >mRNA_P-littoralis_Contig716.8.2 ID=mRNA_P-littoralis_Contig716.8.2|Name=mRNA_P-littoralis_Contig716.8.2|organism=Pylaiella littoralis U1_48|type=CDS|length=363bp|location=Sequence derived from alignment at P-littoralis_Contig716:46950..54896+ (Pylaiella littoralis U1_48)back to top |