mRNA_P-littoralis_Contig716.34.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig716.34.1
Unique NamemRNA_P-littoralis_Contig716.34.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 487 bits (1254), Expect = 3.000e-170
Identity = 228/273 (83.52%), Postives = 249/273 (91.21%), Query Frame = 1
Query:    4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNT 822
            +VLACLTIL RGN FGSIY LSWMS+  VQK FH+FC+HFATEMYD+HI+LPS+ NGELD+VMG+YEKLGFPGAMGSTDVTHI WSRCPYNQ RSYTGKEGKPTVGYQVTV+H GRVLAVTEGFTGSTNDKTIIC D AVD+IR DKQY EK F V+K DGTT+TL+GCYLIVDNGYHKWR LIEP+KYP++E D+ FS RLESVRKDVECFFGILK RFRILKLAMTYQKQERLDYVFFTCCILHNMLHT+DGM  LEE+VNWVGSAEL+NT
Sbjct:  127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNT 399          
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 436 bits (1120), Expect = 7.400e-151
Identity = 201/268 (75.00%), Postives = 225/268 (83.96%), Query Frame = 1
Query:    4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSA 807
            +VLA LTIL RGNCF SIY +SWMS+  VQ  FHKFCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI WS+CPYN ARSYTGKEG PTVGYQVTV+H GR +AVTEGFT STNDKT +CWDA V++IR D QYTEK FDVY  DGTT TL+GCYL+VDNGYHKW+ L+EPTKYP++E DI FS RLESVRKDVECFFGILK  FRI K+AM Y +QER+D VFFTCCILHNMLHT+DGMD L EN  WV SA
Sbjct:   98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSA 365          
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 9.100e-144
Identity = 200/296 (67.57%), Postives = 228/296 (77.03%), Query Frame = 1
Query:    4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYT----------------------------EKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSA 807
            +VLA LTIL RGNCF SIY +SWMS+  VQ  FHKFC+HFA EMYD+ I+LP++ +G+LD VM +Y++LGF GA+GS DVTHIAWSRCPYNQARSYTGKEG PT+ YQVTVDH GR +AVTEGFTGSTNDKTI+CWD AV++I  DK YT                            EK FDVY  DGTT TL+GCYL+VDNGYHKW+ LIEP+KYP++E D+ FS RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTC ILHNMLHT+DGMD L EN NWV SA
Sbjct:   85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSA 380          
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 6.460e-135
Identity = 185/274 (67.52%), Postives = 216/274 (78.83%), Query Frame = 1
Query:    1 LQVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNT 822
            LQVLA LTIL +GNCF SI+ +SWMS+  VQ  FHKFC+ FA EMYD+HI+LP++ +G+L  VM +Y++LG                 CPYNQARSYTGK+  PT+ YQVTVDH  R +AVTEGFTGSTNDKTI+CWDAAVD+IR DKQYTEK FD+Y  DGTT TL+GCY + DNGYHKW+ LIEP+KYP++E+D+ FS RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT+DGMD L EN NWV SA +  T
Sbjct:   19 LQVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTT 275          
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 3.740e-130
Identity = 172/230 (74.78%), Postives = 199/230 (86.52%), Query Frame = 1
Query:  133 MYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNT 822
            MYD+HI+LP++ +G+LD V+ +Y++LGF GAMGS DVTHIAWSRCPYNQARSYTGKEG PT+GYQVTVDH GR +AVTEGFTGSTNDKT +CWDAAV++IR DKQYTEK FDVY  DGTT TL+GCY++VDNGYHKW+ LIEP+KYP++E D+ FS RLESVRKDVECFFGILK R RIL LAM +Q QER+D VFFTCCILHNMLHT+DGMD L EN NWV SA +  T
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTT 230          
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 5.940e-130
Identity = 184/276 (66.67%), Postives = 216/276 (78.26%), Query Frame = 1
Query:    1 LQVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWE 828
            L+VLACL ILARGNCF  IY +S++S      TFH+F ++FA EMY +HI+LP+    +  KVM +Y++LGF GA GSTDVTHI W  CPYNQARSYTGKEG PTV YQVTVDHT RVLAVT GFTGSTNDK+II +D AV +IR D  Y+EK+F VY+ADGT   L+GCYL+VDNGYHKW TLI P+KYPI + D+ FS RLESVRKDVECFFGI+K RFRILKL++ Y KQE +D VFFTCCILHNMLH+YD    +EE  NW G+A L N WE
Sbjct:  157 LKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWE 430          
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 8.260e-125
Identity = 175/272 (64.34%), Postives = 212/272 (77.94%), Query Frame = 1
Query:    4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRN 819
            QVLACL IL+RGN F  IY +S++S   V  TFH+FCK+FA E+YD+++YLP+    +L KVM +Y+++GFPGA+GSTDVTHI W  CPYNQAR YTGKEGKPTV +QVTVDH+GRVLAVT GFTG+TNDKTII +D AV +IR D  YTE+K+ +Y  DG     +GCYL+VDNGYHKWRTLI P+K PI   D+ FS RLES RKDVEC+FGILK RFRI KLA+ + KQE +D VFFTCCILHNMLH++D   ++ E  NW GSA L N
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT--GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352          
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 2.160e-123
Identity = 175/273 (64.10%), Postives = 213/273 (78.02%), Query Frame = 1
Query:    1 LQVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRN 819
            L+VLACL IL+RGN F  IY +S++S   V  TFH+FCK+FA E+YD+++YLP+    +L KVM +Y+++GFPGA+GSTDVTHI W  CPYNQAR YTGKEGKPTV +QVTVDH+GRVLAVT GFTG+TNDKTII +D AV +IR D  YTE+K+ +Y  DG     +GCYL+VDNGYHKWRTLI P+K PI   D+ FS RLES RKDVEC+FGILK RFRI KLA+ + KQE +D VFFTCCILHNMLH++D   ++ E  NW GSA L N
Sbjct:  173 LKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT--GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443          
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.710e-110
Identity = 158/268 (58.96%), Postives = 196/268 (73.13%), Query Frame = 1
Query:   25 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWE 828
            +L +GNCF  +  LS MS ++ Q TFHKFC+HFA EM+D+HIYLP+     LD+VMG + +LG+ GA GSTDVTHI W+ CP+   RS+TGKEG PT+ Y VTVDH GR LAVT GFTG+TNDKTII +D+ V++IR   QYTE+++ + KA+GT +   GC+LIVDNGYH+W TLI P+KYP   ED  FS  LESVRKDV CF        RILKL M Y K+E +D +FFTCCILHNMLHT+DG+D  EEN +W GSA   + WE
Sbjct:   43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPT--GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWE 300          
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 2.250e-99
Identity = 139/194 (71.65%), Postives = 159/194 (81.96%), Query Frame = 1
Query:    4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEE 585
            +VLA LTIL RGNCF SIY +SWMS+  VQ  FH FCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI W++CPYN  RSYTGKEG PT+GYQVTV+H GR  AVTEGFTGSTNDKTI+CWDAAV++IR DKQYTEK FDVY  DGTT TL+GCYL+VDNGYHKW+ L+   + P   E
Sbjct:  125 KVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVPAERE 318          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig716.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBE2_9PHAE3.000e-17083.52Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE7.400e-15175.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE9.100e-14467.57DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JUX7_9PHAE6.460e-13567.52DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI3.740e-13074.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAU4_9PHAE5.940e-13066.67Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE8.260e-12564.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.160e-12364.10Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE1.710e-11058.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI7_ECTSI2.250e-9971.65Transposon protein, putative, Pong sub-class n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig716contigP-littoralis_Contig716:129233..130276 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size828
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons2
Evalue6.13e-131
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size828
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791490.9421656-CDS-P-littoralis_Contig716:129232..1295201680791490.9421656-CDS-P-littoralis_Contig716:129232..129520Pylaiella littoralis U1_48CDSP-littoralis_Contig716 129233..129520 -
1680791490.9591076-CDS-P-littoralis_Contig716:129736..1302761680791490.9591076-CDS-P-littoralis_Contig716:129736..130276Pylaiella littoralis U1_48CDSP-littoralis_Contig716 129737..130276 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig716.34.1prot_P-littoralis_Contig716.34.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig716 129233..130276 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig716.34.1

>prot_P-littoralis_Contig716.34.1 ID=prot_P-littoralis_Contig716.34.1|Name=mRNA_P-littoralis_Contig716.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=276bp
LQVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHI
YLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGK
EGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQY
TEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFS
GRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNML
HTYDGMDNLEENVNWVGSAELRNTWE
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mRNA from alignment at P-littoralis_Contig716:129233..130276-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig716.34.1 ID=mRNA_P-littoralis_Contig716.34.1|Name=mRNA_P-littoralis_Contig716.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1044bp|location=Sequence derived from alignment at P-littoralis_Contig716:129233..130276- (Pylaiella littoralis U1_48)
TTGCAGGTCCTGGCCTGCCTTACCATACTGGCCAGGGGAAACTGTTTCGG AAGCATCTACATGCTTTCATGGATGAGCAGCACCGTAGTGCAGAAGACTT TCCACAAATTTTGCAAGCACTTCGCGACGGAGATGTACGACGACCACATC TACCTCCCGTCGGACGGAAACGGCGAGCTTGATAAAGTCATGGGAGAGTA CGAGAAGCTGGGGTTTCCGGGCGCGATGGGTTCCACTGATGTTACCCACA TCGCGTGGAGTAGATGCCCCTACAACCAAGCCCGTTCGTACACCGGCAAG GAAGGCAAGCCCACGGTCGGGTACCAGGTGACGGTCGACCACACTGGGCG CGTGTTGGCTGTTACAGAGGGATTCACCGGGTCCACCAACGACAAGACGA TCATCTGCTGGGATGCAGCGGTGGATCAGATTCGTCGCGACAAGCAGTAC ACGGAAAAAAAGTTCGACGTCTACAAAGCGGATGGTACCACGCAAACCCT GGAGGGGTGCTACTTGATCGTCGACAACGGATATCACAAGGTAAAAATAC GTGAATGACGTTGAACGCACTTCTCTTGTTGAAGGGTCAAGTGTTGTATT TCAGAAATCGCTAAACGTGGTGCCGGTTGGCGCGCTCCAAATTGTCTTTA AGATTCTCGGGTGTGTCGTGTCCACCGTGTACGCGGTACTCATGAAGAGG AGACACTGACCTTGAAATACTCCCTTTGTCCGCCTCTGTCTTTCGTTCCA TTCAAGTGGCGTACGTTGATCGAGCCCACCAAATACCCGATAACCGAGGA AGACATTCGGTTCTCGGGGAGGTTGGAGAGCGTGCGGAAGGATGTGGAGT GCTTTTTCGGTATCCTGAAGGCCCGCTTCAGAATACTCAAGCTCGCCATG ACCTACCAGAAGCAGGAGCGCCTGGACTACGTGTTCTTCACGTGCTGCAT CCTGCACAATATGCTTCATACCTACGACGGCATGGACAACCTGGAGGAGA ACGTCAACTGGGTCGGTAGCGCCGAGCTCCGGAACACGTGGGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig716:129233..130276-

>mRNA_P-littoralis_Contig716.34.1 ID=mRNA_P-littoralis_Contig716.34.1|Name=mRNA_P-littoralis_Contig716.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=828bp|location=Sequence derived from alignment at P-littoralis_Contig716:129233..130276- (Pylaiella littoralis U1_48)
TTGCAGGTCCTGGCCTGCCTTACCATACTGGCCAGGGGAAACTGTTTCGG
AAGCATCTACATGCTTTCATGGATGAGCAGCACCGTAGTGCAGAAGACTT
TCCACAAATTTTGCAAGCACTTCGCGACGGAGATGTACGACGACCACATC
TACCTCCCGTCGGACGGAAACGGCGAGCTTGATAAAGTCATGGGAGAGTA
CGAGAAGCTGGGGTTTCCGGGCGCGATGGGTTCCACTGATGTTACCCACA
TCGCGTGGAGTAGATGCCCCTACAACCAAGCCCGTTCGTACACCGGCAAG
GAAGGCAAGCCCACGGTCGGGTACCAGGTGACGGTCGACCACACTGGGCG
CGTGTTGGCTGTTACAGAGGGATTCACCGGGTCCACCAACGACAAGACGA
TCATCTGCTGGGATGCAGCGGTGGATCAGATTCGTCGCGACAAGCAGTAC
ACGGAAAAAAAGTTCGACGTCTACAAAGCGGATGGTACCACGCAAACCCT
GGAGGGGTGCTACTTGATCGTCGACAACGGATATCACAAGTGGCGTACGT
TGATCGAGCCCACCAAATACCCGATAACCGAGGAAGACATTCGGTTCTCG
GGGAGGTTGGAGAGCGTGCGGAAGGATGTGGAGTGCTTTTTCGGTATCCT
GAAGGCCCGCTTCAGAATACTCAAGCTCGCCATGACCTACCAGAAGCAGG
AGCGCCTGGACTACGTGTTCTTCACGTGCTGCATCCTGCACAATATGCTT
CATACCTACGACGGCATGGACAACCTGGAGGAGAACGTCAACTGGGTCGG
TAGCGCCGAGCTCCGGAACACGTGGGAG
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