mRNA_P-littoralis_Contig71.8.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig71.8.1
Unique NamemRNA_P-littoralis_Contig71.8.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 3.720e-44
Identity = 111/278 (39.93%), Postives = 155/278 (55.76%), Query Frame = 1
Query:   55 DTRTLTVLELQKAVRCLLRGEPIDPATRQKCEKDDYRMYGIRV-----------GIKVTSQDLEKTGEIIAVKMDEKDCFNKFTIRWGQTGGGKIEQYSTHDVLRDADKGQDGVSLLDDEDRFGVFVLAVLCMVFTHVHYFIAHNDKIKR---KYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGMLKS--DAGVVDELKEEKSCLKMMGLEHSDVTA--SSLLFRNKRFHSTHIPLVNHFVRGAQAAWKLGRLVSMESCMAPLSANEL 834
            + R LT+L+L +A  CL +G P+     +KCEK++Y +YGI V           G +VTS D  + GE++  KMDE   +  FT+ W +    +   YST DVLRD D  Q   +L + +++ GVF+LA LCMV   V+ FI  N K++          L  D+  D    R + WE+TK A A DTL   E+  L S  D G+  E+ EEK+C +MMGL + D  A  + L+   + F   H+  VNHFVRGAQA+++LGR  +M S M  LS NEL
Sbjct:  599 EVRNLTLLDLTEAASCLDKGNPVSEEIWRKCEKENYGLYGITVRRAGPTGETIPGTEVTS-DKGRRGELVEAKMDEG--YTVFTVEWSEGKSNRRSAYSTEDVLRDRDDNQGVATLEEAKEKMGVFLLATLCMVNAQVYRFITKNTKLENVSVSSETRPLARDKTVDITKGRNHAWEETKKARAVDTLMDNEVTFLDSSEDKGLRVEM-EEKTCFEMMGLIN-DARAHFTGLVRSTEDFQDKHLAFVNHFVRGAQASFRLGRPTNMASSMIHLSVNEL 871          
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: D7FZH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH0_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 5.830e-43
Identity = 104/278 (37.41%), Postives = 158/278 (56.83%), Query Frame = 1
Query:   34 SDERTKSDTRTLTVLELQKAVRCLLRGEPIDPATRQKCEKDDYRMYGIRV------GIKVTSQDLEKTGEIIAVKMDEKDCFNKFTIRWGQTGGGKIEQYSTHDVLRDADKGQDGVSLLDDEDRFGVFVLAVLCMVFTHVHYFIAHNDKIKRKYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGMLKS--DAGVVDELKEEKSCLKMMGLE-HSDVTASSLLFRNKRFHSTHIPLVNHFVRGAQAAWKLGRLVSMESCMAPLSANELKL 840
            + ++T ++ R LT L++ +A  CL +G P+     +K EK+DY +YGI        G KVTS +    GE++  +  +   +N FTI W  +   K  +Y T DVLRD D GQ  VSL +   R   F+ +  CM     H FI +N K+        L +D++ D ++ RK+ WE+T+ A A D L   E+ +LKS  D  ++ E+K  KSC   MGL+ ++ +    L+  N+ F+S H+P +NHFVRGAQA+++LGR +S+ S M  +S NEL L
Sbjct:  910 ASKKTINEVRNLTYLDITRASTCLDKGLPVGEDIWRKLEKEDYGLYGITTRREEVSGTKVTSAN--NKGEVVVARRVKG--YNTFTIEWSDSRK-KNSEYKTGDVLRDRDDGQGVVSLGEATRRIERFLRSARCMADVQFHEFITNNVKVHDAKSTRPLSQDKSDDIINGRKHAWEETEAACAVDMLLPNEIDLLKSGEDPDLLGEMKAPKSCFAFMGLDDYARIGQFGLIKSNEDFNSKHLPFLNHFVRGAQASFRLGRPISLASSMVFMSVNELPL 1182          
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.830e-41
Identity = 113/296 (38.18%), Postives = 160/296 (54.05%), Query Frame = 1
Query:   19 MHIKISDERTKSDTRTLTVLELQKAVRCLLRGEPIDPATR------QKCEKDDYRMYGIRV--------------GIKVTSQDLEKTGEIIAVKMDEKDCFNKFTIRWGQTGGGKIEQYSTHDVLRDADK--GQDGV-SLLDDEDRFGVFVLAVLCMVFTHVHYFIAHND-KIKRKYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGML-KSDAGVVDELKEEKSCLKMMGLEHSDVTASSLLFRNK-RFHSTHIPLVNHFVRGAQAAWKLGRLVSMESCMAPLSAN 828
            M  +I   RTK DTR+LT L ++KA+         DP  R      +K EK DYR+YGI+V              G  V     +KTGE+    +DE   +N F I+W   GG  +  YST DVL  A++  G  GV S  DD+ R  +F+  VLCMV   V  ++  +D KIKR+   V L ++  + T+ LR   W+  +  + ADT+  +E  +L KS  G+++E + + S    +GL+    T ++    N  RFH  H+  VNHFVRGAQ++WKLGR  S+ESC+APLSA 
Sbjct:  719 MLAEIKKARTKQDTRSLTYLHIEKALG--------DPTGRDFSDVVEKLEKFDYRLYGIKVMGQGGRVRSRPGQKGTLVRDVHRKKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSV--YSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGGGLLEEARRDGSLFMALGLDRYRATNTTGFVTNGYRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAG 1004          
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: A0A6H5L2T9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T9_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 2.600e-33
Identity = 85/212 (40.09%), Postives = 123/212 (58.02%), Query Frame = 1
Query:  211 EKTGEIIAVKMDEKDCFNKFTIRWGQTGGGKIEQYSTHDVLRDADK--GQDGV-SLLDDEDRFGVFVLAVLCMVFTHVHYFIAHND-KIKRKYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGML-KSDAGVVDELKEEKSCLKMMGLEHSDVTASSLLFRNK-RFHSTHIPLVNHFVRGAQAAWKLGRLVSMESCMAPLSAN 828
            +KTGE+    +DE   +N F I+W   GG  +  YST DVL  A++  G  GV S  DD+ R  +F+  VLCMV   V  ++  +D KIKR+   V L ++  + T+ LR   W+  +  + ADT+  +E  +L KS  G+++E + + S    +GL     T ++    N  RFH  H+  VNHFVRGAQ++WKLGR  S+ESC+APLSA 
Sbjct:   26 KKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSV--YSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGGGLLEEGRRDGSLFMALGLGRYRATNTTGFVTNGCRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAG 235          
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: D8LMU9_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU9_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 4.090e-33
Identity = 91/267 (34.08%), Postives = 150/267 (56.18%), Query Frame = 1
Query:   52 SDTRTLTVLELQKAVRCLLRGEPIDPATRQKCEKDDYRMYGIRVG-IKVTSQDLE-KTGEIIAVKMDEKDCFNKFTIRWG---QTGGGKIEQYSTHDVLRDADKGQDGVSLLDDE-DRFGVFVLAVLCMVFTHVHYFIAHNDKIKRKYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGMLKSDAGVVDELKEEKSCLKMMGLEHSDVTASSLLFRNKRFHSTHIP----LVNHFVRGAQAAWKLGRLVSMESCMAPLS 822
            SDTR LT  ++ +AVR +     ID A  +K EK+D R+YGI V  +  T  +L+ + G ++A K D  D + +F +      + G G  +  ++  +L  A    +G+   +DE  R G    ++  +V+  V+ F+  +DK+KRK + V L   E  + + LR++ W+Q K A A++ +N  ELG+L SD  +  EL+++ S +K++ +         LL      H  + P     V+H+++GAQAA+KLGR++S+ESCMAPLS
Sbjct:  211 SDTRYLTRNDVTEAVRQMKAEIEIDGAIIRKMEKEDPRLYGITVDPVSGTQVELDSRKGRVVAAKRDA-DGYLEFRVELDGKQRKGKGTNKTLNSRQLLESA--VSEGIVRWEDEVKRMGKAFCSIFALVYVLVYKFVISDDKVKRKVNPVKLEGKERTEALKLRRFAWDQIKSARASEVINAHELGLLASDEELQRELQQDNSLVKVLNINLDTYPGLMLLEDEHEQHMDYAPQHYSTVDHYIKGAQAAYKLGRVMSLESCMAPLS 474          
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: D8LHA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA1_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.630e-31
Identity = 92/282 (32.62%), Postives = 153/282 (54.26%), Query Frame = 1
Query:    1 MEKQAKMHIKISDERTKSDTRTLTVLELQKAVRCLLRGEPIDPATRQKCEKDDYRMYGIRVG-IKVTSQDLE-KTGEIIAVKMDEKDCFNKFTIRWG---QTGGGKIEQYSTHDVLRDADKGQDGVSLLDDE-DRFGVFVLAVLCMVFTHVHYFIAHNDKIKRKYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGMLKSDAGVVDELKEEKSCLKMMGLEHSDVTASSLLFRNKRFHSTHIPLVNHFVRGAQAAWKLGRLVSMESCMAPLSAN 828
            M+ Q ++  K   +R   DTR LT  ++ +AVR +   + ID    QK EK+D R+YGI    +  T  +L+ K G ++A + D  D + K+ +      +   G  +  +T  +L  A  G +GV   + E DR      A+L +V+  V+ F+    ++KRK   V L  ++ ++ ++LR++ WE+ KGA A   +N  E  +L SD G+  EL E+ +  +++G+       S L+   + +   H   V+H+V+GAQAA+KLGR++S +SCMAPLS  
Sbjct:    1 MDAQREIAKKKKKDRPIPDTRYLTRNDVIEAVRAIKAEKEIDSVIMQKMEKEDPRLYGITADPVSGTLVNLDGKKGRVVAARRDV-DGYLKYCVELEGKHRKTKGIAKNVNTRQLLEAA--GGEGVVRWEKEVDRVTTVFCAILSLVYVPVYKFVTIVPRVKRKVKPVDLKGEDGKEAVELREFAWEKIKGAPATHVVNDHEKKLLASDEGLEQELCEKGTLARVLGINLD--AYSGLVHEPRDYAKQHYSTVDHYVKGAQAAYKLGRVMSFQSCMAPLSVG 277          
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: D7FKZ5_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ5_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 3.800e-31
Identity = 95/298 (31.88%), Postives = 156/298 (52.35%), Query Frame = 1
Query:   31 ISDERTKSDTRTLTVLELQKAVRCLL--RGEPIDPATRQKCEKDDYRMYGIRV--------------GIKVTSQDLEKTGEIIAVKMDEKDCFNKFTIRWGQTGGGKIEQYSTHDVLRDADK--GQDGVSLLDDEDRFGVFVLAVLCMVFTHVH-YFIAHNDKIKRKYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGMLKS--DAGVVDELKEEKSCLKMMGLE-HSDVTASSLLFRNKRFHSTHIPLVNHFVRGAQAAWKLGRLVSMESCMAPLSANEL--KLPRQI 852
            I  +R K+D R LT+ E++ A+  +    G   D A + K  K DYR+YGI V              G KV   D  + G +    +D++ C   FT++WG+    +  ++  +DVL  A+     D V++ DD+ R  +F+  VLCMV   V  Y  +  +++ R+ +   L  +    TM +RK  +E+ +  ++A T+  +E+ +L+S  D  +V +L++  S   M+GL+   D     L++  + FH   +   NHF+RGAQ AWKLGR  S ESC+ P+SA  +  +LP +I
Sbjct:  833 IRGDRAKADHRYLTLCEIKAALMDVDGDTGGDFDTAWK-KLGKIDYRLYGITVMGRRLRGKGVQYEKGTKVRDSD-GREGVVAGYSLDKETCSGLFTVQWGEK---ETTEHGLYDVLELAENFGDPDVVTIGDDKWRVRMFLRGVLCMVNVQVRRYTTSSENRVTRRRNLYTLPSESADRTMAMRKTAYEEIQDVSSASTMTPYEIKILESPSDPELVRDLEKAGSFFTMLGLDGFKDTQELGLVYVREEFHKRQVEFANHFIRGAQVAWKLGRPTSFESCLVPVSAGGVYTELPSEI 1125          
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: A0A6H5JX39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX39_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 2.470e-26
Identity = 82/264 (31.06%), Postives = 141/264 (53.41%), Query Frame = 1
Query:   52 SDTRTLTVLELQKAVRCLLRGEPIDPATRQKCEKDDYRMYGIRVG-IKVTSQDLE-KTGEIIAVKMDEKDCFNKFTIRWGQTGGGKIEQYSTHDVLRDADKGQDGVSLLDDE-DRFGVFVLAVLCMVFTHVHYFIAHNDKIKRKYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGMLKSDAGVVDELKEEKSCLKMMGLEHSDVTASSLLFRNKRFHST-----HIPLVNHFVRGAQAAWKLGRLVSMESCMAPL 819
            SDTR LT  ++ +AVR +     ID A  +K EK+D R+YGI V  +  T  +L+ + G ++A                   G G  +  +T  +L  A    +G+   +DE  R      ++  +V   V+ F  ++D++KRK + V L   E  +   LR++ W+Q K A A++ +N  EL +L SD  +  EL+++ S ++++ + + D     +L +++  H       H   ++H+++GAQAA+KLGR++S+ESCMAPL
Sbjct:  668 SDTRYLTRNDVTEAVRQMKAAIEIDGAILRKMEKEDPRLYGITVDPVSGTQVELDSRKGRVVA-------------------GKGTNKTLNTRQLLESA--VGEGIGRWEDEVKRMEKAFCSIFALVHVPVYKFAINDDEVKRKVNPVKLEGKEKTEAFKLRRFAWDQIKSARASEVINAHELCLLASDEELQRELRQDNSLVQVLNI-NLDTYPGLMLLKDEHEHQMDYAPQHYSTIDHYIKGAQAAYKLGRVMSLESCMAPL 909          
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: A0A6H5JY76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY76_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 2.430e-25
Identity = 74/194 (38.14%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  268 FTIRWGQTGGGKIEQYSTHDVLRDADKGQDGVSLLDDEDRFGVFVLAVLCMVFTHVHYFIAHNDKIKR---KYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGMLKSDAGVVDELKEEKSCLKMMGLEHSDVTA--SSLLFRNKRFHSTHIPLVNHFVRGAQAAWKLGRLVSMESCMAPLSANEL 834
            FT+ W +    +   YST DVLRD D  Q   +L + +++ GVF+LA LCMV   V+ FI  N K++          L  D+  D    R + WE+TK                  D G+  E+ EEK+C +MMGL + D  A  + L+   + F   H+ LVNHFVRGAQA+++LGR  +M S M  LS NEL
Sbjct:    8 FTVEWSEGKSNRRSSYSTEDVLRDRDDNQGVATLEEAKEKMGVFLLATLCMVNVQVYRFITKNTKLENVSVSSETRPLARDKKVDITKGRNHAWEETK-----------------KDKGLRVEM-EEKACFEMMGLIN-DARAHFTGLVRSTEDFQDKHLALVNHFVRGAQASFRLGRPTNMASSMIHLSVNEL 182          
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Match: A0A6H5K3D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D8_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 4.720e-19
Identity = 82/278 (29.50%), Postives = 138/278 (49.64%), Query Frame = 1
Query:    1 MEKQAKMHIKISDERTKSDTRTLTVLELQKAVRCLLRGEPIDPATRQKCEKDDYRMYGIRVGIKVTSQDLEKTGEI-IAVKMDEKDCFNKFTIRWGQTGGGKIEQYSTHDVLRDADKGQDGVSLLDDEDRFGVFVLAVLCMVFTHVHYFIAHNDKIKRKYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGMLKSDAGVVDELKEEKSCLKMMGLEHSDVTASSLLFRNKR-FHSTHIPLVNHFVRGAQAAWKLGRLVSMESCMAPLSAN 828
            M+ Q  +  K  ++R   DTR LT  ++ +A R +   E ID     K EK   R++G     +V +   +  G +   VK++ K    K          G  ++ +T  +L +A  G+  V   ++  R      A+L  V   ++ F+ ++ K+KRK   V L  +E    +++RK+ W + + A A   +N  E  +L SD  +  EL E  +  +++G   +++ A S L R ++ +   H    +H+V+ AQAA+KLGRL+S ESCMAPLS  
Sbjct:  550 MDAQRAIAKKKKEDRPIPDTRYLTRNDVIEAARAIRAKEEIDSVIMPKLEK---RIHG-----RVVAARRDVDGSLQYRVKLESKHRKTK----------GTNKKLNTRQLL-EAAVGKGVVRWEEEVKRVRKVFCAILSFVCCPLYKFVTNDPKVKRKVKPVNLKGEEGTKAVEIRKFAWNEIQDAPATHVVNDHEKKLLASDERLEQELGENGTLARVLG---TNLDAYSRLMRERKDYAKQHYSTADHYVKVAQAAYKLGRLMSFESCMAPLSVG 805          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig71.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LH64_ECTSI3.720e-4439.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZH0_ECTSI5.830e-4337.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4R3_9PHAE1.830e-4138.18PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L2T9_9PHAE2.600e-3340.09Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LMU9_ECTSI4.090e-3334.08PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D8LHA1_ECTSI1.630e-3132.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FKZ5_ECTSI3.800e-3131.88PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JX39_9PHAE2.470e-2631.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY76_9PHAE2.430e-2538.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3D8_9PHAE4.720e-1929.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig71contigP-littoralis_Contig71:33038..34053 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1016
Hectar predicted targeting categoryother localisation
Exons1
Cds size861
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791478.7387812-CDS-P-littoralis_Contig71:33037..338981680791478.7387812-CDS-P-littoralis_Contig71:33037..33898Pylaiella littoralis U1_48CDSP-littoralis_Contig71 33038..33898 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791478.7535274-UTR-P-littoralis_Contig71:33898..340531680791478.7535274-UTR-P-littoralis_Contig71:33898..34053Pylaiella littoralis U1_48UTRP-littoralis_Contig71 33899..34053 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig71.8.1prot_P-littoralis_Contig71.8.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig71 33038..33898 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig71.8.1

>prot_P-littoralis_Contig71.8.1 ID=prot_P-littoralis_Contig71.8.1|Name=mRNA_P-littoralis_Contig71.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=287bp
MEKQAKMHIKISDERTKSDTRTLTVLELQKAVRCLLRGEPIDPATRQKCE
KDDYRMYGIRVGIKVTSQDLEKTGEIIAVKMDEKDCFNKFTIRWGQTGGG
KIEQYSTHDVLRDADKGQDGVSLLDDEDRFGVFVLAVLCMVFTHVHYFIA
HNDKIKRKYHCVALGEDENQDTMDLRKYVWEQTKGAAAADTLNGFELGML
KSDAGVVDELKEEKSCLKMMGLEHSDVTASSLLFRNKRFHSTHIPLVNHF
VRGAQAAWKLGRLVSMESCMAPLSANELKLPRQIER*
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mRNA from alignment at P-littoralis_Contig71:33038..34053+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig71.8.1 ID=mRNA_P-littoralis_Contig71.8.1|Name=mRNA_P-littoralis_Contig71.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1016bp|location=Sequence derived from alignment at P-littoralis_Contig71:33038..34053+ (Pylaiella littoralis U1_48)
ATGGAGAAACAAGCGAAAATGCATATCAAGATCTCGGATGAGAGGACTAA AAGTGACACGAGAACCTTGACCGTACTCGAATTACAAAAAGCCGTGCGGT GTTTGTTGCGAGGAGAGCCTATCGATCCGGCCACCCGGCAGAAATGTGAG AAGGACGACTATCGCATGTACGGTATTCGTGTCGGAATCAAGGTGACAAG CCAAGACCTAGAGAAGACGGGTGAAATCATCGCTGTTAAAATGGACGAGA AAGATTGTTTCAACAAGTTTACGATACGATGGGGACAAACAGGTGGTGGA AAGATCGAACAGTACTCTACACACGACGTTCTTCGCGACGCCGACAAGGG ACAAGACGGTGTTTCTCTTCTTGACGACGAGGACCGATTCGGCGTTTTTG TACTCGCCGTGCTATGCATGGTTTTTACCCACGTCCACTACTTCATCGCC CATAACGACAAAATTAAGAGAAAGTACCATTGTGTCGCGCTGGGCGAAGA CGAGAATCAGGATACTATGGATCTTCGGAAGTATGTGTGGGAACAAACCA AGGGTGCGGCAGCGGCGGACACGTTGAATGGGTTCGAACTCGGTATGCTC AAATCCGACGCTGGCGTGGTCGATGAGCTCAAGGAGGAAAAGTCTTGTCT AAAAATGATGGGACTGGAACACAGTGATGTTACGGCATCGAGTCTCTTGT TCAGAAACAAGAGATTCCATTCTACACACATACCTCTGGTCAATCATTTC GTGCGAGGAGCTCAGGCCGCATGGAAGTTGGGTCGGTTGGTCAGCATGGA GTCGTGTATGGCCCCTCTTTCTGCGAACGAGCTCAAGCTTCCCCGCCAGA TCGAGAGATAACGGACCGTGAAAAAGGCCTAACGATTTACCAGATGGAAA CGAACGACGCGGACAAGTACGGTCTGCCCACGAGGGCGCTGTTGGCGCGA GCGAAAGTTGGTGACGGGACCTCCTCCCACTGGCTCTCACACTACCCGCT ATACCGGATTTTTTTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig71:33038..34053+

>mRNA_P-littoralis_Contig71.8.1 ID=mRNA_P-littoralis_Contig71.8.1|Name=mRNA_P-littoralis_Contig71.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=861bp|location=Sequence derived from alignment at P-littoralis_Contig71:33038..34053+ (Pylaiella littoralis U1_48)
ATGGAGAAACAAGCGAAAATGCATATCAAGATCTCGGATGAGAGGACTAA
AAGTGACACGAGAACCTTGACCGTACTCGAATTACAAAAAGCCGTGCGGT
GTTTGTTGCGAGGAGAGCCTATCGATCCGGCCACCCGGCAGAAATGTGAG
AAGGACGACTATCGCATGTACGGTATTCGTGTCGGAATCAAGGTGACAAG
CCAAGACCTAGAGAAGACGGGTGAAATCATCGCTGTTAAAATGGACGAGA
AAGATTGTTTCAACAAGTTTACGATACGATGGGGACAAACAGGTGGTGGA
AAGATCGAACAGTACTCTACACACGACGTTCTTCGCGACGCCGACAAGGG
ACAAGACGGTGTTTCTCTTCTTGACGACGAGGACCGATTCGGCGTTTTTG
TACTCGCCGTGCTATGCATGGTTTTTACCCACGTCCACTACTTCATCGCC
CATAACGACAAAATTAAGAGAAAGTACCATTGTGTCGCGCTGGGCGAAGA
CGAGAATCAGGATACTATGGATCTTCGGAAGTATGTGTGGGAACAAACCA
AGGGTGCGGCAGCGGCGGACACGTTGAATGGGTTCGAACTCGGTATGCTC
AAATCCGACGCTGGCGTGGTCGATGAGCTCAAGGAGGAAAAGTCTTGTCT
AAAAATGATGGGACTGGAACACAGTGATGTTACGGCATCGAGTCTCTTGT
TCAGAAACAAGAGATTCCATTCTACACACATACCTCTGGTCAATCATTTC
GTGCGAGGAGCTCAGGCCGCATGGAAGTTGGGTCGGTTGGTCAGCATGGA
GTCGTGTATGGCCCCTCTTTCTGCGAACGAGCTCAAGCTTCCCCGCCAGA
TCGAGAGATAA
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