mRNA_P-littoralis_Contig71.63.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig71.63.1
Unique NamemRNA_P-littoralis_Contig71.63.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: D8LH57_ECTSI (Putative, Dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH57_ECTSI)

HSP 1 Score: 1196 bits (3093), Expect = 0.000e+0
Identity = 593/599 (99.00%), Postives = 597/599 (99.67%), Query Frame = 1 
Query:    1 QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAEGAPLDVDPADDK 1797
            +VAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMG GKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGG+LVAVGDVNGTVSLLEVCESLAVSAGSQEK AIGAMFEREMKQEKNLELRERDLRRAKAAEQ+AKN+ADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAEGAPLDVDPADDK
Sbjct:    2 EVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGAGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGKLVAVGDVNGTVSLLEVCESLAVSAGSQEKGAIGAMFEREMKQEKNLELRERDLRRAKAAEQDAKNKADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAEGAPLDVDPADDK 600
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: A0A835ZH32_9STRA (Putative dynein intermediate chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH32_9STRA)

HSP 1 Score: 1031 bits (2666), Expect = 0.000e+0
Identity = 507/601 (84.36%), Postives = 547/601 (91.01%), Query Frame = 1 
Query:    1 QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNA--RMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAEGAPLDVDPADDK 1797
            QVAYLYTKVRS+FGKHC FKDVPAFLLETVPCS EY  N+V RNPSV+E+DT+ HMSEHEANTER+++KHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYK A+K+LGP+IG CM+QNNT+DIYEEYF+  +VDHSSEPPSAKGLAVFRDP++   IKRTATSINWHPDGPTKIAVSYSIL+FQDPRFM A  RMPV SYVWD +NPN PDV L PPSPLCCLRFNPKSTD LVGGSYNGLINFFDLRKPG   G  +PLE+SVIEKSHHDPVYDVFW+SSKTGNQC SVSTDGQMMWWDTRRL EPTD LQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQ+NLRNRKQNNGISVFDM  GKHHGPIYS+QRNP QNK+FMTVGDWTARIWAED+KTPIMTTKYH AYLT GCFSPTRAGVF+VTRMDGVVD+WDY+YRQNEVAYSHKVGDA LSSI+VQG+ Q GG+LVAVGDVNGTVSLLEVCESLAV  G+QEKAAIGAMFEREMKQEKNLELRERDLRRA+A          +EKKDGKDERMEELLR+VDA FLAMIKEAEDDE+KGA+G  +D DPA+DK
Sbjct:   49 QVAYLYTKVRSDFGKHCRFKDVPAFLLETVPCSEEYCQNFVTRNPSVSEVDTTAHMSEHEANTERVVSKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKGAVKALGPVIGGCMRQNNTVDIYEEYFEDTQVDHSSEPPSAKGLAVFRDPHS---IKRTATSINWHPDGPTKIAVSYSILSFQDPRFMGAANRMPVSSYVWDVLNPNAPDVELIPPSPLCCLRFNPKSTDTLVGGSYNGLINFFDLRKPGGLTGTCLPLESSVIEKSHHDPVYDVFWVSSKTGNQCCSVSTDGQMMWWDTRRLAEPTDVLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQINLRNRKQNNGISVFDMQAGKHHGPIYSVQRNPAQNKFFMTVGDWTARIWAEDIKTPIMTTKYHGAYLTGGCFSPTRAGVFYVTRMDGVVDVWDYYYRQNEVAYSHKVGDAALSSIAVQGSAQAGGRLVAVGDVNGTVSLLEVCESLAVGQGAQEKAAIGAMFEREMKQEKNLELRERDLRRARAXXXXXXXXXXSEKKDGKDERMEELLRRVDAGFLAMIKEAEDDETKGADGG-MDTDPANDK 645
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: A0A7S2QVY7_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVY7_9STRA)

HSP 1 Score: 928 bits (2399), Expect = 0.000e+0
Identity = 465/595 (78.15%), Postives = 514/595 (86.39%), Query Frame = 1 
Query:    1 QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPT---KIAVSYSILNFQDPRFMN-ARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAEGAPL 1773
            +VAYLYTKVR+EFGK   F+D     LE++  + E++ +YV RNPS++E DT+P MSE E NTERL+TK TSMRH+EGGWPKDVD +E SD+ R+RKKAEKDE+YK A+K LGP+IGRCMKQNNTI+IYEEYFDG + DHSSEPPSAKGLAVFRDPN V   KRTATSINWHP+GP    KIAV+YSILNFQD RFMN A+MPV SY+WD MNPNTPD+ L PPSPLCCLRFN KSTD LVGGSYNGL++F+DLRKP A   Q +P ETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTD L LATDSKGGGM LGGSSMEYNQEAGPTKYLVGTEQGIVL +NLRN+K NNGI+V+D GPGKHHGPIYSIQRNPT NK+FMTVGDWTARIW EDLKTPIMTTKYHS+YLTSGC+SPTRAGVF+VTRMDGVVDIWDYFYRQNEVAYSHKVG+  LS+ISVQGN+Q GG+LVAVGDVNGTVSLLEVC+SLA S    EK AI  MFERE KQEKNLELRERDL+R +AAE+           DGKDE+MEELLRKVDADFLAMIKEAEDDESK +EGA L
Sbjct:   11 EVAYLYTKVRAEFGKDIKFEDSAPETLESILPNDEFEKDYVQRNPSISEFDTTPDMSESECNTERLVTKSTSMRHMEGGWPKDVDPSEMSDMQRYRKKAEKDEEYKTAMKLLGPMIGRCMKQNNTINIYEEYFDGVQADHSSEPPSAKGLAVFRDPNDV---KRTATSINWHPEGPATNGKIAVAYSILNFQDQRFMNDAQMPVSSYIWDIMNPNTPDIELLPPSPLCCLRFNAKSTDTLVGGSYNGLVSFYDLRKPNAPEKQCMPHETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDVLNLATDSKGGGMTLGGSSMEYNQEAGPTKYLVGTEQGIVLAINLRNKKSNNGITVYDSGPGKHHGPIYSIQRNPTHNKFFMTVGDWTARIWVEDLKTPIMTTKYHSSYLTSGCWSPTRAGVFYVTRMDGVVDIWDYFYRQNEVAYSHKVGEDALSTISVQGNMQSGGRLVAVGDVNGTVSLLEVCDSLA-SQQPNEKMAINGMFERETKQEKNLELRERDLKRQRAAEEXXXXXXXXXXXDGKDEKMEELLRKVDADFLAMIKEAEDDESKASEGADL 601
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: A0A7S2FI35_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FI35_9STRA)

HSP 1 Score: 903 bits (2333), Expect = 0.000e+0
Identity = 448/594 (75.42%), Postives = 505/594 (85.02%), Query Frame = 1 
Query:    1 QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTE-YDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAEGAPLDV 1779
            +VAYLYTKVR+EFGKHC+FKDVP  +L+  P   E ++D YV RNP    +DT PHMSEH ANTERL+ ++TSM H EGGWPKDVD TE +D NRFRKKAEKDEDYK A+K+LGP+I RCMKQNNTIDIYEEYF+GD+ DHS EPP+AKGLAVFRDPN V   KRTATSINWHP+GP KIAVSYSIL+FQDPR  NA MP +SY+WD +NPNTP+  L P SPLCCLRFNPKST+ LVGGSYNGL+ F+DLR+      Q+ P ++S+IEKSHHDPVYDVFWISSKTGN CASVSTDGQM+WWD R+L +PTD L L TDSKGGGMVLGGSSM YN EAGPTKYL+GTEQGIVL VNL+++KQNNGI+V+D GPGKHHGPIY+I+RNPT NK+FMTVGDWTARIW ED KTPIMTTKYHSAYLTSGC+SPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGD  LS I+V       G+LV+VGDV GTVSLLEVCESLA    + EK AI  MF+RE KQEKNLE+RERDL+RAKAAE EA+NR  A+KKDGKDE+MEELLRKVDADFLAMIKEAEDDESK +EGA L+ 
Sbjct:    2 EVAYLYTKVRTEFGKHCNFKDVPCEILKEEPVDDESFNDMYVQRNPCTFTVDTCPHMSEHSANTERLVVQNTSMLHREGGWPKDVDPTEPADTNRFRKKAEKDEDYKSAVKALGPVISRCMKQNNTIDIYEEYFEGDQSDHSGEPPTAKGLAVFRDPNHV---KRTATSINWHPEGPAKIAVSYSILSFQDPRAANAHMPKKSYIWDILNPNTPEQELLPQSPLCCLRFNPKSTETLVGGSYNGLVTFYDLRRQ-----QSTPFDSSLIEKSHHDPVYDVFWISSKTGNHCASVSTDGQMLWWDIRKLSQPTDQLLLNTDSKGGGMVLGGSSMTYNTEAGPTKYLIGTEQGIVLGVNLKSKKQNNGITVYDSGPGKHHGPIYAIERNPTHNKFFMTVGDWTARIWFEDTKTPIMTTKYHSAYLTSGCWSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDQELSCIAVSNQA---GRLVSVGDVKGTVSLLEVCESLAAPQAN-EKTAISNMFDRETKQEKNLEVRERDLKRAKAAEAEARNRESADKKDGKDEKMEELLRKVDADFLAMIKEAEDDESKQSEGAGLEA 583
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: A0A7S3HCJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCJ1_9STRA)

HSP 1 Score: 896 bits (2316), Expect = 0.000e+0
Identity = 446/596 (74.83%), Postives = 499/596 (83.72%), Query Frame = 1 
Query:    1 QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPD--GPTKIAVSYSILNFQDPRFMNARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGA-TIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAEGAPLDV 1779
            ++A+LYTK R +FGKH  F  V A  LE +PCS  Y  NY+ RNPS+A  DT+PHMSEHEANTERL+TK +SMRHVEGGWPKDVDFTEQSDV+RFRKKAEKDEDYK A+K+LGPI+ RCMKQ NTIDIYEEYF+GD VDHSSEPPSAKGLAVFRDP      KRTATSINWHPD   P KIAVSYS L FQ+ +F  +RMP QS++WD +NPNTPD  L PPSPLCCLRFNPK+TD+LVGGSYNGLI F+DLR+ G  T  + +P  TSVIEKSHHDPVY+VFWI+SKTGNQC SVSTDGQM+WWDTRRL EPTD+LQL TD K  G +LGGSS+EYN EAGP+KYLVGTEQG+VL VNL+NRKQNNGI+VFD G GKHHGPIYSIQRNP   K F+T+GDWTARIW EDL+TPIMTTKYHS+YLTSGC+SPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKV D  LSSI+VQG  Q GG+LVA+GDV GTVSLLE+CESLAV   + E+ AI  MFEREMKQEKNLE RER+LRR KA E +   R   +KKD KDE+ME LLRKVDADFLAMIKEAEDDESK AE + LD 
Sbjct:   12 ELAHLYTKKRRDFGKHPKFSAVQAEFLEVIPCSDAYKSNYIMRNPSIACFDTAPHMSEHEANTERLVTKSSSMRHVEGGWPKDVDFTEQSDVSRFRKKAEKDEDYKGAVKALGPIVSRCMKQVNTIDIYEEYFEGDNVDHSSEPPSAKGLAVFRDPLDE---KRTATSINWHPDPSAPAKIAVSYSDLTFQNAKFATSRMPQQSFIWDILNPNTPDSELLPPSPLCCLRFNPKNTDSLVGGSYNGLITFYDLRRSGGGTSKETLPFSTSVIEKSHHDPVYEVFWINSKTGNQCVSVSTDGQMLWWDTRRLSEPTDSLQLCTDVKAQGQILGGSSLEYNSEAGPSKYLVGTEQGVVLMVNLKNRKQNNGITVFDQGAGKHHGPIYSIQRNPANTKCFLTIGDWTARIWMEDLRTPIMTTKYHSSYLTSGCWSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVCDPTLSSIAVQGTAQSGGKLVAMGDVTGTVSLLELCESLAVPQ-TNERKAIDLMFEREMKQEKNLEARERELRRQKALETDKSTREAQDKKDAKDEKMEALLRKVDADFLAMIKEAEDDESKAAESSSLDA 603
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: F0YQ52_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQ52_AURAN)

HSP 1 Score: 869 bits (2245), Expect = 2.010e-313
Identity = 442/592 (74.66%), Postives = 492/592 (83.11%), Query Frame = 1 
Query:    1 QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAEGAPLD 1776
            +VAYLYTKVRS+FGK   F+D    +L +V  S E+D ++V RNPSVA LDTSPHMSEHE NTERL+ K++S+RH+EGGWPKDVD  E +DVNR+RKKAEKDEDYK  +K+LGPII RCM+QNNTIDIYEEYF  D+ D S EPPSAKGLAVFRDPNA+   KRTATSI+WHP+GPTKIAVSYSILNFQD RF +AR+PVQSY+WD +NPNTPD  LTPPSPLCCLRFNPKSTD LVGGSYNGL+ F+DLR+ G       PLE+SVIEKSHHDP+YDVFWISSKTGNQCASVSTDGQM+WWDTRRLGEP D L L +D+KG GMVLGGSSMEYN+E  PTKYLVGTEQGIVL +NLRNRKQNNGI+V+D G GKHHGPIYSIQRNPT NK+FMTVGDWTARIW EDLKTPIMTTKYHSAYLTSGC+SPTRAGVF+VTRMDGVVDIWDYFYRQNEVAYSHKVGDA LS+ISV       G+LVAVGD NGTVSLLEVCESLA    + EK AI +M ERE KQEKNLELR+RDLRRA+  + E               +MEE LR VDA+FL MIKEAEDDESK  EG  LD
Sbjct:    2 EVAYLYTKVRSDFGKQVRFEDPETRILFSVAPSDEFDKSFVLRNPSVATLDTSPHMSEHETNTERLVVKNSSIRHMEGGWPKDVDAAEPTDVNRYRKKAEKDEDYKTTMKNLGPIISRCMRQNNTIDIYEEYFSHDDRDWSGEPPSAKGLAVFRDPNAM---KRTATSIHWHPEGPTKIAVSYSILNFQDSRFTSARLPVQSYIWDIINPNTPDTELTPPSPLCCLRFNPKSTDTLVGGSYNGLVTFYDLRRQGG----GSPLESSVIEKSHHDPIYDVFWISSKTGNQCASVSTDGQMLWWDTRRLGEPVDKLLLNSDTKGSGMVLGGSSMEYNKEI-PTKYLVGTEQGIVLSLNLRNRKQNNGITVYDAGAGKHHGPIYSIQRNPTHNKFFMTVGDWTARIWMEDLKTPIMTTKYHSAYLTSGCWSPTRAGVFYVTRMDGVVDIWDYFYRQNEVAYSHKVGDAALSAISVSNG---SGRLVAVGDANGTVSLLEVCESLAAPQAN-EKNAIASMLERETKQEKNLELRDRDLRRAREKKDEXXXXXXXXXXXXXXAKMEEQLRTVDANFLNMIKEAEDDESK-VEGVTLD 580
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: A0A6V1SU02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SU02_HETAK)

HSP 1 Score: 842 bits (2176), Expect = 1.600e-303
Identity = 417/535 (77.94%), Postives = 462/535 (86.36%), Query Frame = 1 
Query:  166 MSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVN--GIKRTATSINWHPDGPTKIAVSYSILNFQDPRFM-NARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAE 1761
            MSEH ANTER +T  +SMRH EGGWPKDVD +EQSDV+RFRKKAEKDE+YK AIK LGP+IG+C++QNNTIDIYEEYF+GD  DHSSEPPSAKGLAVFRDPNA+   G +RTATSINWHP+GPTKIAVSYS+LNFQDPRF+ ++RMP+ SYVWD +NPNTPDV L PP+PL CLR+NPKST+ LVGGSYNGLI F+DLRKPGA  G+A P + SVIEKSHHDPVYDVFW+SSKTGNQC SVSTDGQM+WWDTRRL +P+D L LATD+KGGGMVLGGS++EYN EAGPTK+LVGTEQG+VL VN RN KQNNGI+VFDMGPGKHHGPIYSIQRNPT  K+F+TVGDWTARIW EDLKTPIMTTKYH AYLT+GC+SP RAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGD+PLSSISVQG+VQ GG+LVAVGD NGTVSLLEVC+SL  S    EKAAI AM ERE KQEKNL+LRE               R  AEKKDGKDE+MEELLR VDA FLAMIK AEDDESK  E
Sbjct:    1 MSEHIANTERSVTASSSMRHEEGGWPKDVDPSEQSDVSRFRKKAEKDEEYKNAIKDLGPVIGQCLRQNNTIDIYEEYFEGDAADHSSEPPSAKGLAVFRDPNALGAQGAQRTATSINWHPEGPTKIAVSYSVLNFQDPRFLGSSRMPLPSYVWDIVNPNTPDVELLPPNPLVCLRYNPKSTETLVGGSYNGLITFYDLRKPGAPTGRAAPHDASVIEKSHHDPVYDVFWVSSKTGNQCVSVSTDGQMLWWDTRRLADPSDRLLLATDAKGGGMVLGGSALEYNTEAGPTKFLVGTEQGVVLSVNTRNAKQNNGIAVFDMGPGKHHGPIYSIQRNPTNTKFFLTVGDWTARIWTEDLKTPIMTTKYHPAYLTAGCWSPARAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDSPLSSISVQGHVQGGGRLVAVGDTNGTVSLLEVCDSLG-SPQPNEKAAINAMLERETKQEKNLDLREXXXXXXXXXXXXXXQREAAEKKDGKDEKMEELLRMVDASFLAMIKSAEDDESKATE 534
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: A0A8J2WWZ9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWZ9_9STRA)

HSP 1 Score: 830 bits (2145), Expect = 2.180e-298
Identity = 418/586 (71.33%), Postives = 481/586 (82.08%), Query Frame = 1 
Query:    1 QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGA 1758
            +VAYLYTKVRSEFGK  +F D    +L T+P + E++D+Y+ RNP    +DT P  SEHE NT+RL+TK +S+RH EGGWPKDVD TE +DV R+RKKAEKD+DYK  +K+LGPII RCM+QNNTIDIYEEYF G++ D SSEPPSAKGLAVFRDPN    IKRTATSINWHP+GPTKIAVSYSILNFQDP+F NAR+PV+SY+WD  NPNTPD ALTPPSPLCCLRFNPKSTD LVGGSYNGL++F+DLRK GA      P E SVIEKSHHDPVYD FWISSKTGNQCASVSTDG M+WWDTRRLGEP D LQL+T   G   VLGGS+M+Y++E  PTKY+VGTEQGIVL +NLRNRKQNNGI+V+D   GKHHGPIY+I RN T  K+FMTVGDWTAR+W EDLKTPIMTTKYHSAYLTSGC+S TRAGVFFVTRMDG+VD+WDYFYRQNEVAY+HKVGD  LSSI+   N    G+L++VGDV GTV+L+EVC+SLA    + EK+AIGAM ERE KQEKNLELRERDLRRA+   +      + E+K+ K + MEE LR VDADFL MIKEAEDDE+  A
Sbjct:    2 EVAYLYTKVRSEFGKQTNFSDQDTRILHTIPQTDEFEDDYIPRNPVCTTVDTCPTYSEHETNTDRLVTKASSIRHAEGGWPKDVDPTEPADVQRYRKKAEKDDDYKANMKALGPIISRCMRQNNTIDIYEEYFAGEDRDWSSEPPSAKGLAVFRDPNE---IKRTATSINWHPEGPTKIAVSYSILNFQDPKFSNARLPVESYIWDVTNPNTPDQALTPPSPLCCLRFNPKSTDTLVGGSYNGLVSFYDLRKSGA------PQECSVIEKSHHDPVYDCFWISSKTGNQCASVSTDGNMLWWDTRRLGEPVDALQLSTGKDGA--VLGGSAMDYHKEV-PTKYVVGTEQGIVLAINLRNRKQNNGIAVYDQNHGKHHGPIYAIHRNQTHTKFFMTVGDWTARVWMEDLKTPIMTTKYHSAYLTSGCWSSTRAGVFFVTRMDGIVDVWDYFYRQNEVAYTHKVGDCALSSIA---NDATTGRLLSVGDVEGTVALMEVCDSLATPQHN-EKSAIGAMLERETKQEKNLELRERDLRRARDKAKGETGETE-EEKEAKAQAMEEQLRAVDADFLNMIKEAEDDEATAA 570
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: A0A067CMM6_SAPPC (Uncharacterized protein n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CMM6_SAPPC)

HSP 1 Score: 791 bits (2042), Expect = 1.600e-282
Identity = 392/587 (66.78%), Postives = 464/587 (79.05%), Query Frame = 1 
Query:    1 QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAE 1761
            ++AY YTK R  FG+HC FK V A +LE +P +  +D +YV R P VA LDT+P MSEHE NTERLITK++SMRHVEGGWPKDVD  EQ+DV RFRKK EKD++YK A+K LGP+  R +KQNNTI+IY++YF       ++E PSAKGLAVFRDP +V   +RT + I+WHP+ P ++A  Y ILNFQDP+F+NARMP  SY+WD +NPNTP+V L P SPLCCLR+NPKS D LVGGSYNGLI+FFD+RK G++     P+ETS+IE SHHDPVYDVFWISSKTGNQC SVSTDG M+WWD R L +PT  + L+      G VLGGSSMEYN EAGPTKYLVGTEQGIVL VNLRN KQNNGI+V+D G GKHHGPIY++QRNPT NK+F+T+GDWTAR+W EDLKTPIM+T YH +Y+T+GC+SPTRAGVFFVTRMDGVVD+WD+FYRQN  AYSHKVGD PLSSI+VQGN Q GG+LVAVGD NG +SLLEV + LA S  S EKAAI  MFERE K+EKNLE RE++ +R KA   + K     E    KDE+MEELLR VDA+FL MIKEAED E+K  E
Sbjct:    2 ELAYQYTKPRRTFGRHCDFKHVEAKVLEAIPATDSFDHDYVKRRPMVARLDTTPDMSEHEVNTERLITKNSSMRHVEGGWPKDVDSAEQNDVQRFRKKVEKDDEYKQAVKFLGPVAERGLKQNNTINIYQDYFAHMGEPATTEQPSAKGLAVFRDPESV---RRTVSKIDWHPESPQRMAACYCILNFQDPKFVNARMPANSYIWDVLNPNTPEVVLKPLSPLCCLRYNPKSVDQLVGGSYNGLISFFDIRKSGSS-----PVETSMIEHSHHDPVYDVFWISSKTGNQCVSVSTDGSMLWWDIRHLAQPTHRIMLSDKD---GQVLGGSSMEYNTEAGPTKYLVGTEQGIVLSVNLRNIKQNNGITVYDTGAGKHHGPIYTVQRNPTHNKFFLTIGDWTARVWCEDLKTPIMSTTYHDSYVTAGCWSPTRAGVFFVTRMDGVVDVWDFFYRQNVAAYSHKVGDVPLSSIAVQGNAQSGGKLVAVGDSNGMISLLEVSDGLA-SPQSNEKAAINGMFERETKREKNLEAREKEQKRKKATMDDGKVE---ELPSTKDEKMEELLRSVDANFLNMIKEAEDTENKNME 573
[Close]
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Match: A0A2D4CF06_PYTIN (Uncharacterized protein n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4CF06_PYTIN)

HSP 1 Score: 788 bits (2034), Expect = 3.660e-281
Identity = 390/587 (66.44%), Postives = 460/587 (78.36%), Query Frame = 1 
Query:    1 QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAELDTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAEKDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGLAVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNARMPVQSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDLRKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMMWWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQGIVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCESLAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADAEKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAE 1761
            ++AYLYTK RS FG+HC FK V A +LET+P +   + +YV R P V  LDT+P MSEHE NTERLITKH+SMRHVEGGWPKDVD  EQSDV RFRKKAEKD+D+K A+K LGP++ R +KQNNTI+IY++YF       ++E PSAKGLAVFRDP  V   KRT + I+WHP+ P K+A  Y IL+FQDP+F +ARMP  SY+WD MNPNTP+  L P SPL C+R+NPKS D LV GSYNGL+ FFDLRK GAT     P ETSVIE SHHDPVYDVFWISSKTGNQC SVSTDG M+WWD R L +PT  + L       G+  GGSSMEYN EAGPTKYLVGTEQG+VL +NLRN KQNNGI+V+D G GKHHGPIYSIQRNPT NK+FMT+GDWTAR+W EDLKTPIM+T YH +Y+T+GC+SPTRAGVFFVTRMDGVVDIWD+FYRQNEVAYSHKVGD  LS+ISVQGN   GG+L AVGDVNG +SL+E+ + LA +    EKAAI  MFERE K+EKNLE +E++++R KA  +E K+  +      KD++MEELLR VDA+FL MIKEAED E+K  E
Sbjct:    2 ELAYLYTKPRSTFGRHCDFKSVDAKVLETIPSTDTLESDYVKRRPMVTRLDTTPDMSEHEVNTERLITKHSSMRHVEGGWPKDVDPAEQSDVQRFRKKAEKDDDFKQAVKFLGPVVDRALKQNNTINIYQDYFAHMGEPATTEQPSAKGLAVFRDPEPV---KRTISKIDWHPESPAKMAACYCILHFQDPKFSSARMPANSYIWDVMNPNTPETTLRPASPLVCMRYNPKSVDQLVAGSYNGLLTFFDLRKSGAT-----PAETSVIEHSHHDPVYDVFWISSKTGNQCCSVSTDGWMLWWDIRHLAQPTHKILLHDKD---GLSFGGSSMEYNTEAGPTKYLVGTEQGVVLSINLRNAKQNNGITVYDTGAGKHHGPIYSIQRNPTHNKFFMTIGDWTARLWCEDLKTPIMSTAYHDSYVTAGCWSPTRAGVFFVTRMDGVVDIWDFFYRQNEVAYSHKVGDVALSAISVQGNASSGGKLFAVGDVNGMISLMELSDGLA-TLQPNEKAAINGMFERETKREKNLEAKEKEMKRRKAMAEEGKHEDNGSSH--KDDKMEELLRTVDANFLGMIKEAEDSENKNME 574
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig71.63.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH57_ECTSI0.000e+099.00Putative, Dynein intermediate chain n=1 Tax=Ectoca... [more]
A0A835ZH32_9STRA0.000e+084.36Putative dynein intermediate chain n=1 Tax=Tribone... [more]
A0A7S2QVY7_9STRA0.000e+078.15Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A7S2FI35_9STRA0.000e+075.42Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3HCJ1_9STRA0.000e+074.83Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
F0YQ52_AURAN2.010e-31374.66Uncharacterized protein n=2 Tax=Aureococcus anopha... [more]
A0A6V1SU02_HETAK1.600e-30377.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2WWZ9_9STRA2.180e-29871.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A067CMM6_SAPPC1.600e-28266.78Uncharacterized protein n=10 Tax=Saprolegniaceae T... [more]
A0A2D4CF06_PYTIN3.660e-28166.44Uncharacterized protein n=3 Tax=Pythium TaxID=4797... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig71contigP-littoralis_Contig71:227217..233510 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog44056.XP_009033999.1
Preferred nameDNAI2
PFAMsWD40
Model size1800
Max annot lvl2759|Eukaryota
KEGG koko:K10409,ko:K11143
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001539,GO:0001578,GO:0003008,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005858,GO:0005875,GO:0005886,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007320,GO:0007368,GO:0007389,GO:0007600,GO:0007605,GO:0007618,GO:0007620,GO:0008150,GO:0009605,GO:0009612,GO:0009628,GO:0009799,GO:0009855,GO:0009897,GO:0009986,GO:0009987,GO:0010996,GO:0015630,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019953,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0030425,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0032991,GO:0034622,GO:0035082,GO:0036126,GO:0036157,GO:0036158,GO:0036477,GO:0040011,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044782,GO:0045503,GO:0045504,GO:0046692,GO:0048609,GO:0048856,GO:0048870,GO:0050877,GO:0050896,GO:0050954,GO:0051179,GO:0051674,GO:0051704,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0071944,GO:0097014,GO:0097223,GO:0097447,GO:0097458,GO:0097729,GO:0098552,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494
Exons13
Evalue3.3e-314
EggNOG OGsKOG1587@1|root,KOG1587@2759|Eukaryota
Ec32 ortholog descriptionputative, Dynein intermediate chain
Ec32 orthologEc-24_000630.1
Descriptiondynein heavy chain binding
Cds size1800
COG categoryS
BRITEko00000,ko00001,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig71.63.1prot_P-littoralis_Contig71.63.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig71 227217..233510 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791480.6254592-CDS-P-littoralis_Contig71:227216..2273181680791480.6254592-CDS-P-littoralis_Contig71:227216..227318Pylaiella littoralis U1_48CDSP-littoralis_Contig71 227217..227318 -
1680791480.6392262-CDS-P-littoralis_Contig71:227782..2278961680791480.6392262-CDS-P-littoralis_Contig71:227782..227896Pylaiella littoralis U1_48CDSP-littoralis_Contig71 227783..227896 -
1680791480.6499844-CDS-P-littoralis_Contig71:228563..2286591680791480.6499844-CDS-P-littoralis_Contig71:228563..228659Pylaiella littoralis U1_48CDSP-littoralis_Contig71 228564..228659 -
1680791480.6711955-CDS-P-littoralis_Contig71:229248..2293531680791480.6711955-CDS-P-littoralis_Contig71:229248..229353Pylaiella littoralis U1_48CDSP-littoralis_Contig71 229249..229353 -
1680791480.6828837-CDS-P-littoralis_Contig71:229620..2297551680791480.6828837-CDS-P-littoralis_Contig71:229620..229755Pylaiella littoralis U1_48CDSP-littoralis_Contig71 229621..229755 -
1680791480.70063-CDS-P-littoralis_Contig71:230195..2303811680791480.70063-CDS-P-littoralis_Contig71:230195..230381Pylaiella littoralis U1_48CDSP-littoralis_Contig71 230196..230381 -
1680791480.7168376-CDS-P-littoralis_Contig71:230743..2309461680791480.7168376-CDS-P-littoralis_Contig71:230743..230946Pylaiella littoralis U1_48CDSP-littoralis_Contig71 230744..230946 -
1680791480.7278278-CDS-P-littoralis_Contig71:231287..2314531680791480.7278278-CDS-P-littoralis_Contig71:231287..231453Pylaiella littoralis U1_48CDSP-littoralis_Contig71 231288..231453 -
1680791480.73762-CDS-P-littoralis_Contig71:231790..2319321680791480.73762-CDS-P-littoralis_Contig71:231790..231932Pylaiella littoralis U1_48CDSP-littoralis_Contig71 231791..231932 -
1680791480.75033-CDS-P-littoralis_Contig71:232137..2322981680791480.75033-CDS-P-littoralis_Contig71:232137..232298Pylaiella littoralis U1_48CDSP-littoralis_Contig71 232138..232298 -
1680791480.762109-CDS-P-littoralis_Contig71:232501..2326241680791480.762109-CDS-P-littoralis_Contig71:232501..232624Pylaiella littoralis U1_48CDSP-littoralis_Contig71 232502..232624 -
1680791480.7737598-CDS-P-littoralis_Contig71:233016..2331111680791480.7737598-CDS-P-littoralis_Contig71:233016..233111Pylaiella littoralis U1_48CDSP-littoralis_Contig71 233017..233111 -
1680791480.7850215-CDS-P-littoralis_Contig71:233338..2335101680791480.7850215-CDS-P-littoralis_Contig71:233338..233510Pylaiella littoralis U1_48CDSP-littoralis_Contig71 233339..233510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig71.63.1

>prot_P-littoralis_Contig71.63.1 ID=prot_P-littoralis_Contig71.63.1|Name=mRNA_P-littoralis_Contig71.63.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=600bp
QVAYLYTKVRSEFGKHCSFKDVPAFLLETVPCSTEYDDNYVARNPSVAEL
DTSPHMSEHEANTERLITKHTSMRHVEGGWPKDVDFTEQSDVNRFRKKAE
KDEDYKIAIKSLGPIIGRCMKQNNTIDIYEEYFDGDEVDHSSEPPSAKGL
AVFRDPNAVNGIKRTATSINWHPDGPTKIAVSYSILNFQDPRFMNARMPV
QSYVWDTMNPNTPDVALTPPSPLCCLRFNPKSTDNLVGGSYNGLINFFDL
RKPGATIGQAVPLETSVIEKSHHDPVYDVFWISSKTGNQCASVSTDGQMM
WWDTRRLGEPTDTLQLATDSKGGGMVLGGSSMEYNQEAGPTKYLVGTEQG
IVLQVNLRNRKQNNGISVFDMGPGKHHGPIYSIQRNPTQNKYFMTVGDWT
ARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYF
YRQNEVAYSHKVGDAPLSSISVQGNVQVGGQLVAVGDVNGTVSLLEVCES
LAVSAGSQEKAAIGAMFEREMKQEKNLELRERDLRRAKAAEQEAKNRADA
EKKDGKDERMEELLRKVDADFLAMIKEAEDDESKGAEGAPLDVDPADDK*
back to top

mRNA from alignment at P-littoralis_Contig71:227217..233510-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig71.63.1 ID=mRNA_P-littoralis_Contig71.63.1|Name=mRNA_P-littoralis_Contig71.63.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6294bp|location=Sequence derived from alignment at P-littoralis_Contig71:227217..233510- (Pylaiella littoralis U1_48)
CAGGTCGCTTACCTTTACACCAAGGTCCGCTCCGAGTTTGGTAAGCACTG
CTCTTTCAAGGACGTGCCGGCGTTTCTATTGGAAACGGTGCCGTGCTCGA
CGGAGTACGATGACAATTACGTCGCGCGGAACCCCAGCGTCGCCGAGCTC
GATACGTCTCCGCACATGTCTGGTAAGAGAAACACCAACACAGCGAAATA
TGTGGTACATTTATATCTAATGATAGGGCACGGCCGAATCACGTCAGCGT
GGAGCGGAGTGATGTTCAACGCCTACGCTGCTCTGCCTGTAATTATAGAA
TGAGTCGATCGCTGAGAGGTAACAGCAGTTTTGCTAAAATGTCTGACTCC
CACGTTGGCTGCATTGCGCGCGGTCATGCTATGATAATGTGTTGATCAGA
GCACGAGGCGAACACCGAGAGATTGATAACCAAACACACGTCGATGCGCC
ACGTGGAAGGAGGCTGGCCAAAGGACGTCGATTTCACAGAGCAGGTGGAT
GAACGGAGCCCATTCTTGTGTATAGGACTTCGCTCGTTCGGAATAATGGG
ATGAAAATACAACACACACACATCCACACATACTGCGCTCAATGTTCTCT
TCATGTAGTCTATGACGGGCCGTACAAGTGCGGCTATGAAACACATACCG
CACACGTAGACGAAACCGTTGGACCGTAGTGCAAATTGATTTCAGCGTCT
GTACGTTCTCGATCACTAAGCAGCGTAGACTTCTTTCAATCGCGACAGGC
CTAAATGACTAGTCTCTCAAAATACTGATATAAAAACAAACAGAATGAAA
AAAGCTCACGCCCACGCCCACCGCCTACCGTTGCAATCTACGCCTCTGGC
TCGGTACACTGCTGGCTCGGTGCATTGTCGCTCCAGTCGGACGTGAATCG
ATTTCGCAAGAAGGCAGAAAAGGATGAGGATTACAAGATTGCAATCAAGA
GCTTGGGGCCCATCATTGGGCGGTGCATGAAGCAAAACAACACAATCGAT
ATCTACGAGGTGGGGAGCGAGCACAAAAAATGTCATGAGAAGTCACTCGG
AGAACACGGAAAAAGAGTTTCATAAAACCCATCGATAGAACTCGCGTGTC
TGCTGTGATAGATTGCAGCTGCCGATAGAGCTGTGTGTTTTGAATCTATT
GCACGCTTGCCAATGTGCATTTTCCAGCTACAACCCTCAAATAATTGCTG
CTTGCGCACCAGGAATATTTCGATGGAGACGAGGTGGACCATTCCAGCGA
GCCTCCGAGCGCGAAAGGGCTGGCGGTTTTTCGTGACCCTAACGCAGTAA
ACGGGATTAAGAGAACGGCGACATCCATCAACTGGCATCCGGACGGGCCG
ACGAAGATTGCTGTTTCGTATAGGTTTGTTTGGTTGCGCCGCCACGACGG
CCACACTTGTCTGCGAGCTGCAGCTAGGTCGAACAAGGACATAGCGTAAA
AGAGATTGGCGGGTTCGACCGTGAGATTCTCCCCTACACCCACGTACGCC
CGTCTACCCGACGTCGAAGGTCGCCTGTCTGTCATGCACTGAACTCCTCC
CAAAAATCGCGTTGGCCGAATGTCGCAGCATTCTCAACTTTCAAGACCCA
CGATTCATGAATGCACGGATGCCGGTCCAGTCGTACGTATGGGATACTAT
GAACCCAAATACCCCGGACGTGGCGCTCACACCCCCAAGCCCCTTATGCT
GCTTGCGATTCAACCCGAAGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GATAGAGAGAGAGAGCCGAAGATCTCATACTTCTACCGCTTCAGGGTGAC
TGCTACTGTGTGCAGCAACGCGATCAAACCGTTGCATGCGGCACAGCATG
CTGCTGACGAGTAGTCAACTTCTCCATGCCAACGGACGATAGTTCTTGGT
ACATGTATCTGAGCTGGGGCGTAGAGAGTAACATGTTTACGGCAGCGAAC
GCCCGACTTAACTAGGTACTCGTGATTCAGCTTTCATGAAGCTTCAGTAG
TGTTTATTTCTGAGCTAACCCTTCAAAACCTCGTGCCGCCTGTTACATGA
ACTAAAGAGCACGGACAACCTTGTGGGTGGGTCCTACAACGGGTTGATCA
ACTTCTTCGACCTGCGAAAGCCAGGTGCTACCATTGGACAGGCGGTGCCC
CTAGAGACGTCCGTGATTGAAAAGAGTCACCACGACCCCGTGTACGACGT
ATTCTGGATTTCCTCCAAGACAGGTGAACCGCTGTGGACAGAGGGGATAA
ATGATACAACAAGCGTGCAACGGGGAAAGTTGCGCCATAGATGAAGACAT
GGTCTGGTGGTGAATGGGCATAGCTATTGCCCTCTCTATATAGCTGTGGA
AATCTATGTCAAGCAACACATTGGTGCGTTGGCAGAGTTCTCACGGGAGA
ACGTCCCCGCTTTTATTGATGCGTAGCCCCCACTAAGCTCGATTCTCGTA
GAACTCCCATTTCCCTCCTCCCACAACATTATTATTGCTGCAAATTCTTG
CACTTAATCGCCCTGACATCACCTTCAGAACCTTATACCTGACCTGCGGT
TGATGTCGTGTCAGGCAACCAGTGCGCGTCGGTGTCGACCGACGGGCAGA
TGATGTGGTGGGACACGCGTCGATTGGGGGAGCCCACCGACACGCTGCAG
CTGGCGACAGACTCGAAGGGGGGTGGGATGGTCCTTGGTGGTAGTTCGAT
GGAATACAACCAGGAGGCTGGCCCGACCAAGTACCTGGTGGGGACGGAAC
AGGGTATCGTGTTGCAGGTGAGAACAATAGTAAATGCACCAGTATCTATC
TTGTGTTGGCATCGCGGAAGAACCAAACATACGAGGTAAAAGTATGTCAT
ACGGCGGAAGGTCGAAGGAGGCGTGAGGTACTCCGAAGAGGTAGGCGCAA
GATGCTACAAAAAAACTACTGTACCGTCGGTGGGAGCACATGTGGGCCCA
GTTTGCCGAATCGTTGCCTGCGTCTACTTATTTTTTGGAGTAAATTGCGT
CGAATCACTAAGCATTTGTTTTGCCCGCCTTGAATGGGAAAATGTACCTC
TTTCTGATGTAGTCTCTCCAGAGCCGCGAAATCGTTGGTTGCGAAAGTTG
TTTGATCAGAACACTTGAATTTGCGGCAGGTTAATCTTCGCAACAGGAAG
CAAAACAACGGTATCAGCGTGTTTGATATGGGTCCGGGCAAGCACCACGG
GCCCATCTACAGCATTCAACGCAACCCCACGCAAAACAAGTATTTCATGA
CCGTCGGCGACTGGACAGCGAGAATATGGGCCGAGGACCTTAAGACTCCC
ATCATGACGACCAAGGTGATCAGTCAAACCGTAGTTTTGACCGAAGTGGC
ACGCTGCGAAAATTGTACAAAGGGTCGTGTCGTGCGTGTTGTGCAGACGA
TGCTGCTCAATTTCAGAAAAAGGGCAACAAATTTTGGCCAAGTGAGTTTT
GCTCGAAGTTCAGTACTTCATATAGTTCGTTCTCTGTCGCATGCATTGTG
TGATGGTACGACCCCAAAGCTTTAGAAACTTATTCCAGTAAAGTTCAAAC
CCCGGAAGATTTGTCAGGCCCAAGTATTCTCCATTGTTGACGCCGCAGGT
GTATTCTGATTGTAGTTCAAAGAAAAATGTGATGCTCCATCGGATAAAAA
AGACTCCGTATATGTATGCTTTTGGGTCGCGTGGATCCCTGTTTCGCCCA
ATAGAAACATAACGGCTGCTGCGTTGCCGCGCACCATGCCTGCTTTCTGT
CGCAGTACCACAGTGCGTACTTAACGAGCGGGTGCTTTAGCCCCACGAGG
GCAGGCGTTTTCTTCGTGACAAGGATGGACGGCGTTGTTGACATCTGGGA
CTACTTCTACCGCCAAAACGAAGTCGCCTATAGTCACAAGGTGGGTGTAT
TCCGCTTTCTCCACTGCTCGGCTTTGGGATATTGCGAAATCTGGGGGGTC
CCCCGTCCCATACAGGCCTAGCACATGTGATCCCTGGGCACACCTGTGCC
GGAATAAAGTAGATGGGGTCCCAAAGCTAGATAGCTGTCGTCTGCCTACC
TGCCCCACGAGCCCCTTGAGGGGCAGCAACAAAATCCTAGACATCGAGTT
TCCAGCCCCCATCGTGCTGCGCGTTTTCGCTTCACTTCTTTCGGTTTACG
GCACCAGGTAGGAGACGCTCCTCTCAGCTCTATCTCGGTGCAGGGCAACG
TCCAAGTAGGTGGACAGCTGGTGGCCGTCGGAGATGTAAACGGCACGGTG
TCGCTTTTAGAGGTGAGTGGCGGCAGCATTCACCATCTGCAGATGCATTT
ACATTGACTCGGTCATGTCGCAGAACCGTACCTTGGGACGTCGAGGAAAC
GAAACACGTAAGGACTTCGAGACATGGTGCATACACGTAGATTTACTCCA
CACCACAAAAACGCTCTGGGTGCGATCCAAGCACCAATTGGAGCGATCCA
AGCACCCATTGGCGGTAACCATATTTTTTTGAATGAGAAAGGACGTGAGA
AGGTCCATGATTTGACCTCGCCCGCGGGGCAGGGTATATGCCTCAAATGC
GGAAGATGCACACTGTAGATATTTTTCGAATACTCCAATAAACGTGAAGC
TTTGGCTCGTGACGGACACGCTGGGCAAAGTCGTCGTACGTGTCTCAAAC
TCTCAAACACGCTTGATCTGCTGTGGTCGTTAGTGAGCTGGTGCATGAAT
CACGAAAACTGACTCGAATCTAATAAGTCGGACCGTTTCCCACGCAGCAC
TGTGATGCGTCACCGCGCAAGCTCGCAGGACAGTAAAACATGTACCCACT
CGTGGTTGACCGAACGCTTGCGTCTGCTTTCTTATTTTGGCCGTATGGCA
GGTGTGCGAGTCTTTGGCTGTGAGTGCAGGCAGCCAGGAAAAAGCGGCGA
TCGGTGCCATGTTCGAGAGGGAAATGAAGCAAGAGAAGAACCTCGAGGTG
ACCAATTTCAATGATTTTATCTTGTAATAACAAACGTCTCGGCTTAGCTA
CATGCATTCTCCCCAAACTGATTGTTATTGAGTAGCACACGATACCGCGC
CAAAACCCATTTTCTTGGAATGTATTGTTTGCATGTACGTACTCTAATGC
CTCGGTTACCGTCATGTCTTGGCGAGTGCGTAACCGCAAAATGATGGTCC
GGCTGACACAAAGCAAAGAGAATGTGCAGAAGACTCTCTCTCCCATACAC
CTTTCTTGTCGTTTCATCATCCCAAACGGGGGCCCACGGCCACATGTGCC
ACACAACAAGTGCTGATGGGTGCGCCGTACGTGCTTCGCACCAAACGGCG
GCTGGGTTAGTGTGATACGGTCCTTACAGGTTTGAGCTGTGTGCGATATC
TTACGTTCTTAGTACAAAGCAACGAACGATCAATTGTCGAAATATGCCGA
GAATGCTATGACGCCACCAACAAAGACAAATACGAAGTAATGAATGGCCC
GAAACAGCCGTACTGTCTCGTGAACTTTTTCCTTTAGTCGGAAAGAGTGC
CGAGCTCCAGAATAAATCGTGCAAGCAATGAAGTTCGATAACGGATGGCT
GGCTGTTCACCTCCCTCCCACATCTCCGCCCTGGCTATAATTACTCTGCC
TGCTGACTCAACAGCTGCGGGAGAGAGACTTACGGCGAGCGAAGGCGGCC
GAGCAAGAAGCCAAGAACAGGGCCGACGCGGAGAAGAAGGATGGAAAGGA
CGAGCGGATGGAGGAGCTCTTGCGAAAGGTGGGGGGAAACTCACAGGGCG
GATGGAATGACAAAAACAGTATTATTTCCTGCGACTAATTGCTTCGGTGC
ACGATGATGGTATAGTCCGCACTGAGACATGGATGAAGTGAAAGGGTCAT
ACAAAATACGAGCCATGGCAAATATACCACATAGCTCCCGACCTTTCGCC
ATACGACGCGCCGTGCCGTAGCTCTAACGGTGTTGCTGTGGAGTACTACT
GCTCGGAGAACGAGAGGGAATGCCACCCGCCTCCTACTCTGCAAAGATTG
ACATTGCTACAGCAAGATACACTGGTTGCCGTTTACGTGTACACTTTGCG
GTGCGTTTGTTGGGTGACGCTGTCCACACGCAATATTTCACTCGCTTCTG
TACTTGATCGGGGGAGGTAATTATACATTTCCATCTCTCACATCCCCCCC
CTCCCACCTCCCGCTAAAATTTCATGAATTTGCAACAAAAAGGTGGACGC
CGATTTCCTAGCGATGATCAAAGAGGCAGAGGACGACGAGAGCAAGGGGG
CGGAAGGAGCACCGCTAGACGTAGACCCAGCCGATGACAAGTGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig71:227217..233510-

>mRNA_P-littoralis_Contig71.63.1 ID=mRNA_P-littoralis_Contig71.63.1|Name=mRNA_P-littoralis_Contig71.63.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1800bp|location=Sequence derived from alignment at P-littoralis_Contig71:227217..233510- (Pylaiella littoralis U1_48)
CAGGTCGCTTACCTTTACACCAAGGTCCGCTCCGAGTTTGGTAAGCACTG
CTCTTTCAAGGACGTGCCGGCGTTTCTATTGGAAACGGTGCCGTGCTCGA
CGGAGTACGATGACAATTACGTCGCGCGGAACCCCAGCGTCGCCGAGCTC
GATACGTCTCCGCACATGTCTGAGCACGAGGCGAACACCGAGAGATTGAT
AACCAAACACACGTCGATGCGCCACGTGGAAGGAGGCTGGCCAAAGGACG
TCGATTTCACAGAGCAGTCGGACGTGAATCGATTTCGCAAGAAGGCAGAA
AAGGATGAGGATTACAAGATTGCAATCAAGAGCTTGGGGCCCATCATTGG
GCGGTGCATGAAGCAAAACAACACAATCGATATCTACGAGGAATATTTCG
ATGGAGACGAGGTGGACCATTCCAGCGAGCCTCCGAGCGCGAAAGGGCTG
GCGGTTTTTCGTGACCCTAACGCAGTAAACGGGATTAAGAGAACGGCGAC
ATCCATCAACTGGCATCCGGACGGGCCGACGAAGATTGCTGTTTCGTATA
GCATTCTCAACTTTCAAGACCCACGATTCATGAATGCACGGATGCCGGTC
CAGTCGTACGTATGGGATACTATGAACCCAAATACCCCGGACGTGGCGCT
CACACCCCCAAGCCCCTTATGCTGCTTGCGATTCAACCCGAAGAGCACGG
ACAACCTTGTGGGTGGGTCCTACAACGGGTTGATCAACTTCTTCGACCTG
CGAAAGCCAGGTGCTACCATTGGACAGGCGGTGCCCCTAGAGACGTCCGT
GATTGAAAAGAGTCACCACGACCCCGTGTACGACGTATTCTGGATTTCCT
CCAAGACAGGCAACCAGTGCGCGTCGGTGTCGACCGACGGGCAGATGATG
TGGTGGGACACGCGTCGATTGGGGGAGCCCACCGACACGCTGCAGCTGGC
GACAGACTCGAAGGGGGGTGGGATGGTCCTTGGTGGTAGTTCGATGGAAT
ACAACCAGGAGGCTGGCCCGACCAAGTACCTGGTGGGGACGGAACAGGGT
ATCGTGTTGCAGGTTAATCTTCGCAACAGGAAGCAAAACAACGGTATCAG
CGTGTTTGATATGGGTCCGGGCAAGCACCACGGGCCCATCTACAGCATTC
AACGCAACCCCACGCAAAACAAGTATTTCATGACCGTCGGCGACTGGACA
GCGAGAATATGGGCCGAGGACCTTAAGACTCCCATCATGACGACCAAGTA
CCACAGTGCGTACTTAACGAGCGGGTGCTTTAGCCCCACGAGGGCAGGCG
TTTTCTTCGTGACAAGGATGGACGGCGTTGTTGACATCTGGGACTACTTC
TACCGCCAAAACGAAGTCGCCTATAGTCACAAGGTAGGAGACGCTCCTCT
CAGCTCTATCTCGGTGCAGGGCAACGTCCAAGTAGGTGGACAGCTGGTGG
CCGTCGGAGATGTAAACGGCACGGTGTCGCTTTTAGAGGTGTGCGAGTCT
TTGGCTGTGAGTGCAGGCAGCCAGGAAAAAGCGGCGATCGGTGCCATGTT
CGAGAGGGAAATGAAGCAAGAGAAGAACCTCGAGCTGCGGGAGAGAGACT
TACGGCGAGCGAAGGCGGCCGAGCAAGAAGCCAAGAACAGGGCCGACGCG
GAGAAGAAGGATGGAAAGGACGAGCGGATGGAGGAGCTCTTGCGAAAGGT
GGACGCCGATTTCCTAGCGATGATCAAAGAGGCAGAGGACGACGAGAGCA
AGGGGGCGGAAGGAGCACCGCTAGACGTAGACCCAGCCGATGACAAGTGA
back to top