mRNA_P-littoralis_Contig71.33.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig71.33.1
Unique NamemRNA_P-littoralis_Contig71.33.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: D8LH40_ECTSI (ACT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH40_ECTSI)

HSP 1 Score: 599 bits (1544), Expect = 2.750e-210
Identity = 311/341 (91.20%), Postives = 323/341 (94.72%), Query Frame = 1
Query:    1 MSDLVTPTPTRASDA-GATASXXXXGGDGAAQPAIPAVAELAGERASPPPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLKVDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVFMS 1020
            MSDLV PTP RA +A G  A+XXXX   G    A PAVAELAGE ASPPPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDP S+VYFQRLKVDYTLMTIG+ANTGVME+AL+ELAGRYKMEWSI+YRN+KQKVAILVSKDDHCLYDLLIRHRSGELDC VSTIISNHDKLR+VADMFG+PFVHLPIPPKDQGGKRVQE+QIEEILEKESIDLVVLARYMQILTKDFCDKHW HTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLV+GNKTVVFMS
Sbjct:    1 MSDLVAPTPARAGEAPGVAAAXXXXXXVGGG--ARPAVAELAGETASPPPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPSSAVYFQRLKVDYTLMTIGAANTGVMEQALRELAGRYKMEWSITYRNRKQKVAILVSKDDHCLYDLLIRHRSGELDCVVSTIISNHDKLRNVADMFGVPFVHLPIPPKDQGGKRVQEIQIEEILEKESIDLVVLARYMQILTKDFCDKHWQHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVEGNKTVVFMS 339          
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: A0A8J4BZK0_9CHLO (ACT domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4BZK0_9CHLO)

HSP 1 Score: 389 bits (999), Expect = 2.110e-127
Identity = 191/308 (62.01%), Postives = 239/308 (77.60%), Query Frame = 1
Query:   97 AIPAVAELAGERASPPPA--TFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLKVDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVF 1014
            A P+ + +A   A  PPA  + TA + ++CPDQ GV+AAV+ LL+G+G NI+ +DQF+DP S ++FQR+  DY  + IG  N  V+E+A+ ELA RY M+W ISY+NK +K+AILVSK DHCLYDLLIRHRSGEL C +  IISNH  L+ +A+ F +PF HLP+  K+ G K  QE  IE++L  E ID+++LARYMQI ++ FC++HW HTINIHHSFLPAF GA+PYH+AH RGVKIIGATAH+AT +LDAGPII+Q VTRI+H DSV DMIRKGRDLER+VLARAVRWHL   VLV  NKTVVF
Sbjct:   61 AAPSPSPVASGIADAPPAQTSLTANLLLQCPDQKGVIAAVSQLLYGFGCNIIASDQFSDPSSGMFFQRITFDYIDIVIGPGNMSVLERAIGELAARYSMKWQISYKNKVKKMAILVSKQDHCLYDLLIRHRSGELRCHIPLIISNHPDLKHIAETFEVPFHHLPLS-KEPGKKESQEAAIEQLLVSEQIDVMILARYMQIFSQGFCERHWQHTINIHHSFLPAFEGARPYHRAHERGVKIIGATAHFATAELDAGPIIDQGVTRITHRDSVEDMIRKGRDLERMVLARAVRWHLDDRVLVFNNKTVVF 367          
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: A0A836C2F7_9CHLO (ACT domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C2F7_9CHLO)

HSP 1 Score: 387 bits (994), Expect = 1.110e-126
Identity = 185/291 (63.57%), Postives = 233/291 (80.07%), Query Frame = 1
Query:  142 PPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLKVDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVF 1014
            P A  TA + ++CPDQ GV+AAV+ LL+G+G NIV +DQFTD  S+ +FQR+  D++ + IG  NT V+E+A+ ELA R++M+W ++Y+NK +++AILVSK DHCLYDLLIRHRSGEL CE+  IISNH  L+ +AD FG+PF H+PI   D+  K  QE  IE++L KE ID+++LARYMQI T  FC++HW HTINIHHSFLPAF GA+PYH+AH RGVKIIGATAH+AT +LDAGPII+Q V+RI+H DSV DMIRKG+DLERLVLARAVRWHL   V+V  NKTVVF
Sbjct:   78 PQAGLTANLLLQCPDQKGVIAAVSQLLYGFGCNIVSSDQFTDSISNQFFQRITFDFSEIVIGPGNTAVLERAIGELASRFRMKWKLAYKNKIKRLAILVSKQDHCLYDLLIRHRSGELRCEIPFIISNHPDLKHIADTFGVPFHHMPI---DKSSKDSQEKAIEDLLAKEQIDVLILARYMQIFTTGFCERHWEHTINIHHSFLPAFEGARPYHRAHERGVKIIGATAHFATAELDAGPIIDQAVSRITHRDSVDDMIRKGKDLERLVLARAVRWHLDDRVMVYNNKTVVF 365          
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: A0A835WEU7_CHLIN (ACT domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WEU7_CHLIN)

HSP 1 Score: 387 bits (993), Expect = 1.420e-126
Identity = 181/287 (63.07%), Postives = 233/287 (81.18%), Query Frame = 1
Query:  154 FTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLKVDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVF 1014
             +A + + CPDQ GV+AAV+ LL+G+G NIV +DQFTD  SS++FQR+  D++ + IG  NT V+E+A+ ELA R+ M+W I+Y+NK +++A+LVSK DHCLYDLLIRHRSGEL CE+  IISNH  L+ +AD FG+PFVHLP+   D+  K  QE  +E+++++E+ID+V+LARYMQI T+ FC++HW HTINIHHSFLPAF GA+PYH+AH RGVKIIGATAH+AT +LDAGPII+Q V RI+H D+V DMIRKGRDLER+VLARAVRWHL   V+V  NKTVVF
Sbjct:   79 LSANLLLICPDQKGVIAAVSQLLYGFGCNIVASDQFTDSSSSMFFQRITFDFSEIVIGPGNTAVLERAIAELANRFNMKWKIAYKNKVKRMAVLVSKQDHCLYDLLIRHRSGELRCEIPFIISNHPDLKHIADTFGVPFVHLPL---DKNNKEAQEEALEKLIKEENIDVVILARYMQIFTQGFCERHWEHTINIHHSFLPAFEGARPYHRAHERGVKIIGATAHFATAELDAGPIIDQAVARITHRDNVEDMIRKGRDLERMVLARAVRWHLDDRVMVYNNKTVVF 362          
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: A0A7S0RP56_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RP56_9CHLO)

HSP 1 Score: 386 bits (992), Expect = 3.330e-126
Identity = 183/297 (61.62%), Postives = 240/297 (80.81%), Query Frame = 1
Query:  124 GERASPPPATFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLKVDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVF 1014
            G  AS P  T +A + ++CPD  GVVAA++ LL+G+G NIV +DQFTD  ++++FQR++ D++ + IG  NT V+E+A+ ELA R++M+W++SY++K++++A+LVSK DHCLYDLLIRH+SGEL C++  IISNH  L+ +ADMFG+PF HLP+  +D   K+ QE +IE +L +  ID ++LARYMQI T +FC++HW+HTINIHHSFLPAF GAKPYH+AH RGVKIIGATAHYAT++LDAGPII+Q   RI+H DSV DMIRKGRDLERLVLARAVRWHL   +LV  NKTVVF
Sbjct:   84 GGAASGPSKTTSATLLLQCPDTKGVVAALSQLLYGFGCNIVSSDQFTDTDTNMFFQRIEFDFSDLIIGPGNTSVLERAIAELARRFEMKWTVSYQSKRKRLALLVSKLDHCLYDLLIRHKSGELFCDIPIIISNHPDLKHIADMFGVPFRHLPLAGRD---KKEQEAEIEAVLAEHDIDTIILARYMQIFTPEFCNRHWAHTINIHHSFLPAFEGAKPYHRAHERGVKIIGATAHYATSELDAGPIIDQHTARITHRDSVHDMIRKGRDLERLVLARAVRWHLDDRILVFNNKTVVF 377          
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: A0A836B620_9CHLO (ACT domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B620_9CHLO)

HSP 1 Score: 384 bits (986), Expect = 1.960e-125
Identity = 182/287 (63.41%), Postives = 229/287 (79.79%), Query Frame = 1
Query:  154 FTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLKVDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVF 1014
             +A + + CPDQ GV+AAV+ LL+G+G NIV +DQFTD  SS++FQR+  D++ + IG  NT V+E+A+ ELA R+ M+W ISY NK +++A+LVSK DHCLYDLLIRHRSGEL CE+  IISNH  L+ +AD F +PFVHLP+   D+  K  QE  +E++L+ E ID+V+LARYMQI T+ FC++HW HTINIHHSFLPAF GA+PYH+AH RGVKIIGATAH+AT +LDAGPII+Q V RI+H D+V DMIRKGRDLER+VLARAVRWHL   V+V  NKTVVF
Sbjct:   85 LSANLLLICPDQKGVIAAVSQLLYGFGCNIVASDQFTDSSSSMFFQRITFDFSEIVIGPGNTAVLERAIAELANRFNMKWKISYTNKVKRMAVLVSKQDHCLYDLLIRHRSGELRCEIPLIISNHPDLKHIADTFDVPFVHLPL---DKNNKEAQEEALEKLLKDEKIDVVILARYMQIFTQGFCERHWEHTINIHHSFLPAFEGARPYHRAHERGVKIIGATAHFATAELDAGPIIDQAVARITHRDNVEDMIRKGRDLERMVLARAVRWHLDDRVMVYNNKTVVF 368          
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: A0A836CC35_9STRA (Formyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC35_9STRA)

HSP 1 Score: 379 bits (972), Expect = 3.620e-125
Identity = 184/248 (74.19%), Postives = 214/248 (86.29%), Query Frame = 1
Query:  280 VYFQRLKVDYTLMTIGSAN-TGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVFMS 1020
            +YFQRL++DY+ + +   N + VM  A++ELA ++ M W++SY N  ++V +LVSKDDHCLYD+LIRHRSGEL C+V TI+SNH+ LR VADMFGIPF HLPIPPK  GGKR QE+QIE +LE E IDL+VLARYMQILT +FCDK+WS TINIHHSFLPAF GA+PYH+AH RGVKIIGATAHYATTDLDAGPIIEQDVTRI+HSDSVADMIRKGRDLERLVLARAVRWH+A AV+V GNKTVVF S
Sbjct:    1 MYFQRLRLDYSQIHVSPNNMSAVMTTAIEELAVKHDMTWTLSYDNVPKRVVLLVSKDDHCLYDILIRHRSGELACDVVTIVSNHEALRPVADMFGIPFRHLPIPPKADGGKRAQELQIEALLEAERIDLIVLARYMQILTPEFCDKYWSRTINIHHSFLPAFEGARPYHRAHVRGVKIIGATAHYATTDLDAGPIIEQDVTRINHSDSVADMIRKGRDLERLVLARAVRWHIADAVIVHGNKTVVFES 248          
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: A8IBF9_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IBF9_CHLRE)

HSP 1 Score: 378 bits (970), Expect = 3.060e-124
Identity = 177/279 (63.44%), Postives = 225/279 (80.65%), Query Frame = 1
Query:  178 CPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLKVDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVF 1014
            CPDQ GV+AAV+ LL+G+G NIV +DQFTD  S ++FQR+  D++ + IG  NT V+E+A+ ELA R+ M+W I+Y+NK +++A+LVSK DHCLYDLLIR RSGEL CE+  IISNH  L+ +AD F +PFVHLP+   D+  K  QE  +E+++++E ID+V+LARYMQI T+ FC++HW HTINIHHSFLPAF GA+PYH+AH RGVKIIGATAH+AT +LDAGPII+Q V RI+H D+V DMIRKGRDLER+VLARAVRWHL   V+V  NKTVVF
Sbjct:   12 CPDQKGVIAAVSQLLYGFGCNIVASDQFTDSSSGMFFQRITFDFSEIVIGPGNTAVLERAIAELANRFNMKWKIAYKNKVKRMAVLVSKQDHCLYDLLIRLRSGELRCEIPFIISNHPDLKHIADTFNVPFVHLPL---DKNNKEAQEEALEKLIKEEKIDVVILARYMQIFTQGFCERHWEHTINIHHSFLPAFEGARPYHRAHERGVKIIGATAHFATAELDAGPIIDQAVARITHRDNVEDMIRKGRDLERMVLARAVRWHLDDRVMVYNNKTVVF 287          
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: A0A5J4Y4F6_9CHLO (Formyltetrahydrofolate deformylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4F6_9CHLO)

HSP 1 Score: 379 bits (974), Expect = 1.250e-123
Identity = 189/285 (66.32%), Postives = 224/285 (78.60%), Query Frame = 1
Query:  160 AVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLKVDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVF 1014
            A + I+CPDQ GVVAA+A LL+G+G NI+E+DQ+TD  +  YFQR++ DY+   +G  NT V+E A+ ELA RY+MEW I Y NK ++VAILVSK DHCLYDLLIR ++GEL C+V  IISNH  L  +A  FG+ F HLP+P  D   K  QE  IE++LE+  IDL+VLARYMQI ++DFC +H  HTINIHHSFLPAF GAKPYHKAH RGVKIIGATAH+AT +LDAGPIIEQDVTRI+H DSV DM+RKGRDLERLVLARAVRW L   VLV GNKTVVF
Sbjct:   84 ASLLIQCPDQKGVVAALAQLLYGFGCNILESDQYTDQTTGTYFQRIRFDYSECLVGPTNTQVLEHAVGELAMRYEMEWRIYYDNKVKRVAILVSKLDHCLYDLLIRLKAGELSCQVPVIISNHPDLAPIAQQFGVAFRHLPLPRADAESKLQQEAAIEQLLEELDIDLLVLARYMQIFSQDFCARHADHTINIHHSFLPAFEGAKPYHKAHERGVKIIGATAHFATAELDAGPIIEQDVTRITHRDSVKDMLRKGRDLERLVLARAVRWVLEDRVLVHGNKTVVF 368          
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Match: A0A2P6VS75_9CHLO (Formyltetrahydrofolate deformylase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VS75_9CHLO)

HSP 1 Score: 369 bits (946), Expect = 1.250e-120
Identity = 173/282 (61.35%), Postives = 219/282 (77.66%), Query Frame = 1
Query:  172 IKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLKVDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDDHCLYDLLIRHRSGELD-CEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQGGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSFLPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDSVADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVF 1014
            IKCPD  GVVA+VA LL G+G NI+ +DQF+D  + ++FQR+  DY+ M +G  NT V+E+ + E+A +Y M+W +SY  K++++A+LVSK DHCLYDLLIR  +GE++ C +  I+SNH  L  VA  F IP+ HLPI PKD   K  QE  IE ILE+E I+L+VLARYMQI +KDFCD+HW HTINIHHSFLPAF GA+PYH+AH RGVK+IGATAHYAT+DLD GPII QDVT +SH D+V DM+RKGRDLER VLA+AVRWHL   ++V  N+TV+F
Sbjct:    7 IKCPDSKGVVASVAQLLFGFGCNIISSDQFSDIAADMFFQRVVFDYSDMLVGPGNTAVLERGITEVARKYSMDWRVSYSTKQKRMALLVSKLDHCLYDLLIRVENGEMENCTIPIILSNHPDLEVVAKRFNIPYRHLPITPKDAASKAAQEAAIEGILEEEGINLIVLARYMQIFSKDFCDRHWRHTINIHHSFLPAFEGARPYHRAHERGVKVIGATAHYATSDLDCGPIIAQDVTHVSHRDAVPDMVRKGRDLERTVLAKAVRWHLQDRIIVHDNRTVLF 288          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig71.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH40_ECTSI2.750e-21091.20ACT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8J4BZK0_9CHLO2.110e-12762.01ACT domain-containing protein n=2 Tax=Volvox TaxID... [more]
A0A836C2F7_9CHLO1.110e-12663.57ACT domain-containing protein n=1 Tax=Edaphochlamy... [more]
A0A835WEU7_CHLIN1.420e-12663.07ACT domain-containing protein n=2 Tax=Chlamydomona... [more]
A0A7S0RP56_9CHLO3.330e-12661.62Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A836B620_9CHLO1.960e-12563.41ACT domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A836CC35_9STRA3.620e-12574.19Formyl transferase n=1 Tax=Tribonema minus TaxID=3... [more]
A8IBF9_CHLRE3.060e-12463.44Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A0A5J4Y4F6_9CHLO1.250e-12366.32Formyltetrahydrofolate deformylase n=1 Tax=Treboux... [more]
A0A2P6VS75_9CHLO1.250e-12061.35Formyltetrahydrofolate deformylase n=1 Tax=Micract... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig71contigP-littoralis_Contig71:134128..140346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LH40
PFAMsACT,Formyl_trans_N
Model size1900
Max annot lvl2759|Eukaryota
KEGG rclassRC00026,RC00111
KEGG koko:K01433
KEGG ReactionR00944
KEGG Pathwayko00630,ko00670,map00630,map00670
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009853,GO:0009987,GO:0019752,GO:0034641,GO:0042558,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046653,GO:0051186,GO:0071704,GO:1901360,GO:1901564
Exons9
Evalue2.6e-216
EggNOG OGsCOG0299@1|root,KOG3076@2759|Eukaryota
Ec32 ortholog descriptionFormyl transferase, N-terminal
Ec32 orthologEc-24_000430.1
EC3.5.1.10
Descriptionphosphoribosylglycinamide formyltransferase activity
Cds size1023
COG categoryF
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig71.33.1prot_P-littoralis_Contig71.33.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig71 134128..139469 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791479.090351-CDS-P-littoralis_Contig71:134127..1343251680791479.090351-CDS-P-littoralis_Contig71:134127..134325Pylaiella littoralis U1_48CDSP-littoralis_Contig71 134128..134325 +
1680791479.1061409-CDS-P-littoralis_Contig71:134886..1349961680791479.1061409-CDS-P-littoralis_Contig71:134886..134996Pylaiella littoralis U1_48CDSP-littoralis_Contig71 134887..134996 +
1680791479.1197395-CDS-P-littoralis_Contig71:135517..1355751680791479.1197395-CDS-P-littoralis_Contig71:135517..135575Pylaiella littoralis U1_48CDSP-littoralis_Contig71 135518..135575 +
1680791479.133551-CDS-P-littoralis_Contig71:136531..1366201680791479.133551-CDS-P-littoralis_Contig71:136531..136620Pylaiella littoralis U1_48CDSP-littoralis_Contig71 136532..136620 +
1680791479.143767-CDS-P-littoralis_Contig71:137261..1373451680791479.143767-CDS-P-littoralis_Contig71:137261..137345Pylaiella littoralis U1_48CDSP-littoralis_Contig71 137262..137345 +
1680791479.155211-CDS-P-littoralis_Contig71:137939..1380271680791479.155211-CDS-P-littoralis_Contig71:137939..138027Pylaiella littoralis U1_48CDSP-littoralis_Contig71 137940..138027 +
1680791479.1701562-CDS-P-littoralis_Contig71:138574..1386931680791479.1701562-CDS-P-littoralis_Contig71:138574..138693Pylaiella littoralis U1_48CDSP-littoralis_Contig71 138575..138693 +
1680791479.1823306-CDS-P-littoralis_Contig71:138968..1390921680791479.1823306-CDS-P-littoralis_Contig71:138968..139092Pylaiella littoralis U1_48CDSP-littoralis_Contig71 138969..139092 +
1680791479.1950321-CDS-P-littoralis_Contig71:139316..1394691680791479.1950321-CDS-P-littoralis_Contig71:139316..139469Pylaiella littoralis U1_48CDSP-littoralis_Contig71 139317..139469 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791479.2052538-UTR-P-littoralis_Contig71:139469..1403461680791479.2052538-UTR-P-littoralis_Contig71:139469..140346Pylaiella littoralis U1_48UTRP-littoralis_Contig71 139470..140346 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig71.33.1

>prot_P-littoralis_Contig71.33.1 ID=prot_P-littoralis_Contig71.33.1|Name=mRNA_P-littoralis_Contig71.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=341bp
MSDLVTPTPTRASDAGATASAAAAGGDGAAQPAIPAVAELAGERASPPPA
TFTAVINIKCPDQTGVVAAVAHLLHGYGINIVETDQFTDPFSSVYFQRLK
VDYTLMTIGSANTGVMEKALQELAGRYKMEWSISYRNKKQKVAILVSKDD
HCLYDLLIRHRSGELDCEVSTIISNHDKLRSVADMFGIPFVHLPIPPKDQ
GGKRVQEVQIEEILEKESIDLVVLARYMQILTKDFCDKHWSHTINIHHSF
LPAFMGAKPYHKAHARGVKIIGATAHYATTDLDAGPIIEQDVTRISHSDS
VADMIRKGRDLERLVLARAVRWHLASAVLVDGNKTVVFMS*
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mRNA from alignment at P-littoralis_Contig71:134128..140346+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig71.33.1 ID=mRNA_P-littoralis_Contig71.33.1|Name=mRNA_P-littoralis_Contig71.33.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6219bp|location=Sequence derived from alignment at P-littoralis_Contig71:134128..140346+ (Pylaiella littoralis U1_48)
ATGAGCGATCTGGTCACACCGACGCCCACCAGGGCAAGCGATGCGGGTGC TACGGCGTCTGCTGCTGCCGCGGGCGGCGACGGGGCTGCTCAGCCGGCCA TACCGGCCGTGGCAGAGCTAGCCGGGGAGCGTGCATCGCCACCCCCGGCC ACCTTCACAGCCGTCATCAACATCAAGTGCCCCGACCAGACTGGAGTGGT GAGTCACGACAAACTGAACACGAGTGAATGGAACAGCACTGAAGATGCAC TGACAGTATGCCAGACCTAATTTTTTTCTCCCGCGTCGATAGAAGTCCAA CTATTTTCGTTTCATCGCTTACGGCTATGATAGTGGTGTTGTAAAAAAAT GCTGTCTGCCGTGTCGACCACTGACTGTGTGTAACCAAACCAGAGGCAGT CAGTAGTAAGGTCCCTTATCAATATTAGGAACGTGATTTCAACGGTACTC GCCGCAAGATCACCGAGCGTCTGTCTGTGGCGCCTGTGTTATTCTTGTCC CAACCCGATGAAATATGACAGTAATTCGATTGAAAGCTGCTTCCTAACGG TAACGCACGGTACATGCACGGGGTGCGTGTACCTCAATTTTTTTCCTGTC AAATGTGCTAGTTTGTGTACTGCAGGTGTTAAACCATATACTTCACGGGG GGTGAGAGCATACGTGCATTTGTCTCCACTTGTGCGTGCCACTTGTGCGT GCTTTGTGTGGTAATCCCTCTTTATTGTGTCGCTAATGAATCTCGTTGGC TCGACGCAGGTGGCAGCCGTGGCGCACCTGCTGCACGGATACGGTATTAA CATCGTGGAGACGGACCAGTTCACCGACCCGTTCTCGTCGGTGTACTTTC AGCGCTTGAAGGTGGACTAGTGAGTGGTGCCCTTCGTTTCTACTTCCTCT CGTGCCAATTGTTTGTAAATTTAACGGCAACTGCTGTCCTACGAGGTGCT AACTATTCTGACAGTTCCATACGTTCTGTCCTGTAACTTCGTTTTCTTTC ATTCCGACTGTTCTGTACGCCGATCGGGAGCAGACACCGGCCCATGTACA ATGCTTCCCCTTAAACGCCTCCTGTGTATCATACGTCGCCGCAAAAGGGA CCCTCTCTCTGAGGTCCCCCACCTTCACATGCTAGCCACGGCCAATGGCC TTTGCCTTCCTTCGCGGAGTAGTTTCGTCCTTCTATCCTACTGTTCGGCA CGACCCTGCTGTGGTTTTTGTCACATCACACCACCGCTCTTACACATCAC TTTACGTCACCACTGCTATGTGTCAATTCACCGCCTCCATTTCATACCAA TACATGCCGCTGCCGCAATCTGTCAAATAAATGTCACGGCCCGACCCTCC TTGAATGTTCCTCCTACCGCTGTTGACGATTGCTCCTCAGCACCCTGATG ACCATCGGGTCAGCGAATACGGGCGTTATGGAGAAAGCTCTCCAAGAGGT GCGTATTATCGTTACGGTTGTCACGTTTCGCGCCCCGTCGCCTCAACGAC GGAATGCCTTAGACATGTTCTTATTCTCATTGATATTTTTTTCACACCTA TATTGGCCCGCTGGCATCTGGAGATTTCGATAGCTTGTATAATATCATAC ACACAAAAAGGAAGAAGCAACTTAAAAATCAGGGCAGCAAGTCAACCATC GGCCCGCTGTGCTGTTGGGTGTTTGTACTTTGGCTTCCCTACTCGATACC GTCGCCCCTCCTATTCGCAAGAGACCAAAGTCTGTGAAGTGCGCGATTCT GACCTCTTGAGACTAACACGGAAACCACAAACGAGAGATTTGGCTTAAGA GAGATTTGGCTTAAGGTCGACAAAGCAATTGAAACGTTTGGTAAGACTGC CTCTTTGGTAGGCAAGCAGGGATCTCACTCTCCGCGATTCGCTTTTTCGC TGCCTGTTTTTTTGTCTTCGTCCCCCGCATATCAACGGATTGGACTGATC GGCCGATGCATGGGCGGGCCTGTGGATCAATGCACCATTCAATCGGTCGT TGGGTGACTTCCTTGTCTGGATGGGTTGACGGATTGATCGCGGGGGATGG ACTAAAATCGAATGGACTGACTGGACGGACTAAAATCGAATGGACTGGAT GAAAATTTTAAAACGGGCTGGCTACTCGATGGACTACTTAACTCATTGAT CAATGGGAAAATCGGCTCCACGTTCCATGATGCACGAACGGGCCAATCAA CGGCCGCTACTCGATGGACTACTTTACTCATTGATCAATGGGGAAATCGG CTCCACGTTCCATGATGCACGAACGGGCCAATCAACGGCCGGATGGTGGT AAAATGGGTGAACGGGCGATGTGGGTGGACACGTGACTGACTGGGTGATG GGGCGATGGTGAACTCTGGGCGACTTCATTTGGCGGGTCAACCGCAATAT CCAGCTGGCCGGCCGGTACAAAATGGAGTGGTCCATCTCGTACCGCAATA AGAAACAGAAGGTCGCCATTTTAGTTTCCAAGGACGATCATTGGTGAGAG CTCTTTTTCTTTTTTTTTCGACGCCCCGCTCGATACACGCAGTGGTGTGG TGCAAAGACTGTTCGTTCGTGCGTGCGAATGTGTGTGTCTGTGTTTTTGC GTGTCTGCGTGTCTGCGTCGTCGTTCCCGTGCCGCGATTAGGAGGTGATC CACAGCAGGCGTCAGCAGACAAAACTGACCAGACGCTTACAGTGTGTAAT ATCTTCTTCGGGTGTCCTTTTCGACACTGGTATTCTCGTGTGACCAAGAC GACGCGCCTTCTGTCAGTGGTTGAGTTGACGACGTATTACAATTTCGCCT TTCCCGGCACTGACGAGGCACTCTTTTGCCGCCGTGGTGAAGATATCGAG CTTCGACATGTAACAAGCCGAAGGAGTCGGCCCCGTGTGTCATCTAACCC TTTCGCGATGAAATACGGCACGTGCGTGCCAGTGGCCCGCTCCGTCCCTT CACATTTTCACAACCCTCGATTACCCGCGGACTTACCCATCGGTGACCCA CGGAATAACCCGCCGATAATCATGGAATAAACCCCCTTGTTGTCTGTGCC GTTCGTGTCGTCCGCGCCACGAATCGTAATCCCACGGGAACGCATGAACA AACAAAAAAATGCAACGGACGGACGTGCCACCAGCCTGTATGACCTTCTC ATCAGGCACCGGAGCGGAGAGCTCGATTGCGAGGTGTCCACGATAATCAG CAACCACGACAAGCTCAGGTGAAGCAACGATCGAAGGTCTTCACCATCAT GAGCAATCACGACAAGCTCACGTGATACGCGAAATGGTGACTCAATAATC CCAGGAGAATATAAATAGGATACAAAATTGTCCTCTCGGGCAATTTCCAG TAAAACACTAGATCGTTCCGCTGCAGTGCAAAGTACCACACCCGAACGTG AGTTACTCTCTGTAAAGAAATCGATATCATACATATCGTACGATCTCACT TTTTGCGAAAATCAACATTCGATATTTAAGCTTGGTTTTCAAAGAGTCCA TAATCTTTCGTTTTCGACGCCCGTTCCTACACTTTTTGTCAGGACGGCGA CAGAGGTCTGCAGCCTGAAACCACACCCCAACACGACCTGACATTTCGAT CAACGTCTGTTCTTGTGGGCTGAACAGAAATAACGCTTCGACGATTCCAT GCCTGAACTGTTTGTCGTTGATGCGCTAGGCCGATCGAACCCCGAAGTAA TATGTTGCTGTGTGTCTGCTGTGCTATGCTGTACTGTGGTACTGTACGCT GTGCTGTGTGCCGTGTGCCGTGTGCCGTGTGCGTGTGGTGTTTGTGTGCG TTTTCTTTTCAGATCCGTGGCCGACATGTTCGGCATTCCGTTTGTCCATT TGCCAATTCCTCCAAAAGATCAGGGGGGAAAGCGAGTGCAGGAAGTACAG GTACGATGCAATGGATGATCCAAATGCATAACTGCGGAAGTACTACTCTG TACTTGTGTCATTGGTAGCTGCTGCGACTGCTGCTGCTGTTGCTGCTGTG ATGTGATGGCGCTGTCGGTTATACGATTGTCATCAGGCTTCCCACCGAAG ACGCCTGGTAAAGACGCTGCTGTTGTGTGGTCGATGTCCTACCTTGTACA TACGGTAGTGCACCTCTCTTTCCGTCGGTGCTATCCATCCATGTCCCTGC TATGTAGCACGCGTTTATTTGCTCGTTTTTGTTAACACGTAAATGTGGGG GGTCTCGACGAAGATTCGCTCTGCGTGGTCCACCGCGGCTTTTCCAGAGT TTCTCTGGGAGAGAGACGATAGATGAGGCGAAAAACAAGGGGAAAAGTGA GGTGGTTATTGAGAAACCATGGACAGACGATTTTTACCATTTTACCCCGC TCTCTGTTGTTGCTCATATATGTTTATTTAAGTGTGAGTACCTCGTCGAG AATTTCGAACTTATCAACAATTTTTTTTTTAATCGGTTTCTCCGTAGATT GAAGAGATCTTGGAAAAGGAGTCGATCGACCTCGTCGTGCTGGCGCGGTA CATGCAGATCCTCACCAAAGACTTTTGCGACAAGCATTGGAGTCACACCA TCAACATCCACCACAGGTATGTGTGCGGGTGTGTTCTTGTGTTTGTGGGT GTGCGTGTAGTTTTCGGTGGATTACAACTATTCTCCCACACCAACAAGAA GACCATTCGTCCCTGATACAGTAGTCGATGCTATCGCGGAACGAGTGTCA CACAAGCTCATCGTGTTCTGTAGTATTTGGTATACTCGAAGTATCATTTA TCTTTGACATCCGAGCTTTTTCTTCCCGTTTAACGTTACACCTGGTAATT AGAACCGTCTTATCCTTCTTTTTCGATCTTGTTGCGAACAGCTTTCTTCC GGCATTCATGGGGGCAAAGCCGTACCACAAGGCCCACGCGCGCGGGGTGA AGATCATCGGCGCAACTGCCCACTACGCCACCACCGACCTGGACGCTGGT CCCATCATCGAACAGGTATGATACGATGTGGTAACCTATACTTCGAAGTA CTTCGTACATGAAAGCATGACGACCAAATCGCGCAAAGGCCGAGTCTCTG GAAACAGCAAACAGGATTTTCATCATAGGCGTTTCCCGACTTTATTGCTT TTGTACCATCTCTAGGACAGCAATGCTTATCTGCGTCCTTGTCGCTGCCT TTACCGCTGCTTTCCACCGCCGAAAATGGCTGTCGACAGGACGTTACTCG CATCAGCCACAGCGACTCGGTTGCGGATATGATACGCAAAGGTCGCGACC TGGAGAGATTGGTGCTGGCAAGAGCAGTTCGCTGGCACCTTGCGAGCGCG GTGCTGGTGGACGGTAACAAAACCGTCGTCTTCATGTCTTAATTGACATC AGTTTTGGTATCATTTGCGTTGGGCGGTCTTTAGTGCAACCAAATTTTTG TCTTACTTGGTATGTGCGCCTCAACAAATCTTGAACATTGCTTGGATTGT TGATCTGATGTGCGACAAATTTGCGACAAACCCCCAGTCTTTCTAGAGTT GGTCGCCATCATCTCGGATTGATGGGGTAATCGGTCTCGCGTTTTCTAAC TTTCCTTCTGGTAGTCTTTCAGCCAAATTTTGGCGACTGCAACCTTGCCG TTTGAAGATCCCCCATGTGCGAGAAGTCGACGGGGCGCTTACTTTGCGCC GTTCGTTTACGCCCCTCTCTACCGGGGGCGTCAGAGAGTATCTCTGTTTT CGTTTTGTTTGTGTTCTTTCTCACCCTAGCTCGATTTCGGTGTCGACTGT TACGAACACTGCGGGTACCACATGTGTCGTATCTTCCGCCGTACAGTATG CTGTCTCTCTCGTCGATGTATAACTTTCCGGTGTACGTGTAACGCTGATC CGGAGGGAAACTCGAGGCTTTCCAGGTCTGTCTAATAGAAAAACGGGTGC ATGAGAGTGTCCGTTGTGTTCCTTTGAGAAAGCGTAGAGCCGACCAGTAG GAGGACGTCTGGTTTTTGGTTCTTTGTTATTTACAGGCAGTGACGTGTGC AAGTACATCAATTGTGTCCATGACACGCTGTCGTGGTCGTCTTTTGACAT TTTTCTCTGGATATTTTTTCTCAAAAGTGTGTTTTCGGTTTAATGTCGAC CGTGTTGTGTTGATGATGGCCTCTTGTTCTTGCTGTTAAGTTCGACTGCT GAAAAAAGTGTAACGAAATGATGAGTCCTGCTCACGGATTCACGAACCCG AAATAATATATACAAGGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig71:134128..140346+

>mRNA_P-littoralis_Contig71.33.1 ID=mRNA_P-littoralis_Contig71.33.1|Name=mRNA_P-littoralis_Contig71.33.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1023bp|location=Sequence derived from alignment at P-littoralis_Contig71:134128..140346+ (Pylaiella littoralis U1_48)
ATGAGCGATCTGGTCACACCGACGCCCACCAGGGCAAGCGATGCGGGTGC
TACGGCGTCTGCTGCTGCCGCGGGCGGCGACGGGGCTGCTCAGCCGGCCA
TACCGGCCGTGGCAGAGCTAGCCGGGGAGCGTGCATCGCCACCCCCGGCC
ACCTTCACAGCCGTCATCAACATCAAGTGCCCCGACCAGACTGGAGTGGT
GGCAGCCGTGGCGCACCTGCTGCACGGATACGGTATTAACATCGTGGAGA
CGGACCAGTTCACCGACCCGTTCTCGTCGGTGTACTTTCAGCGCTTGAAG
GTGGACTACACCCTGATGACCATCGGGTCAGCGAATACGGGCGTTATGGA
GAAAGCTCTCCAAGAGCTGGCCGGCCGGTACAAAATGGAGTGGTCCATCT
CGTACCGCAATAAGAAACAGAAGGTCGCCATTTTAGTTTCCAAGGACGAT
CATTGCCTGTATGACCTTCTCATCAGGCACCGGAGCGGAGAGCTCGATTG
CGAGGTGTCCACGATAATCAGCAACCACGACAAGCTCAGATCCGTGGCCG
ACATGTTCGGCATTCCGTTTGTCCATTTGCCAATTCCTCCAAAAGATCAG
GGGGGAAAGCGAGTGCAGGAAGTACAGATTGAAGAGATCTTGGAAAAGGA
GTCGATCGACCTCGTCGTGCTGGCGCGGTACATGCAGATCCTCACCAAAG
ACTTTTGCGACAAGCATTGGAGTCACACCATCAACATCCACCACAGCTTT
CTTCCGGCATTCATGGGGGCAAAGCCGTACCACAAGGCCCACGCGCGCGG
GGTGAAGATCATCGGCGCAACTGCCCACTACGCCACCACCGACCTGGACG
CTGGTCCCATCATCGAACAGGACGTTACTCGCATCAGCCACAGCGACTCG
GTTGCGGATATGATACGCAAAGGTCGCGACCTGGAGAGATTGGTGCTGGC
AAGAGCAGTTCGCTGGCACCTTGCGAGCGCGGTGCTGGTGGACGGTAACA
AAACCGTCGTCTTCATGTCTTAA
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