mRNA_P-littoralis_Contig707.20.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE) HSP 1 Score: 141 bits (356), Expect = 4.800e-38 Identity = 63/92 (68.48%), Postives = 77/92 (83.70%), Query Frame = 1
Query: 4 SRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 279
++YHPE NAIER WG++K+IERR CDYS+ SLL RLP TLS+++LSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 376 AKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 467
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 142 bits (359), Expect = 1.560e-37 Identity = 64/92 (69.57%), Postives = 77/92 (83.70%), Query Frame = 1
Query: 4 SRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 279
++YHPE NAIER WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 1017 AKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 1108
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 141 bits (356), Expect = 3.070e-37 Identity = 63/92 (68.48%), Postives = 77/92 (83.70%), Query Frame = 1
Query: 4 SRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 279
++YHPE NAI+R WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 569 AKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 660
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE) HSP 1 Score: 125 bits (314), Expect = 1.770e-32 Identity = 56/83 (67.47%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 31 IERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 279
+R WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 255 FQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 337
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 103 bits (256), Expect = 9.420e-24 Identity = 45/65 (69.23%), Postives = 56/65 (86.15%), Query Frame = 1
Query: 4 SRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATG 198
++YHPE NAIER WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ G
Sbjct: 452 AKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A2I1GI64_9GLOM (Uncharacterized protein n=11 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1GI64_9GLOM) HSP 1 Score: 82.0 bits (201), Expect = 3.270e-16 Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 1 FSRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 279
+ ++H ECN IER WG +K RR C Y+ L+KR+P L S+ ++ IRK+AR SW Y++AY GL+G + K+ HR + ++ ++
Sbjct: 506 YPKFHCECNFIERFWGFAKRETRRICSYNFADLMKRVPEVLVSVPITTIRKFARKSWRYMDAYDKGLEGRTAEWAVSKYKSHRRLPENIENLM 598
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A2N1N172_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N1N172_9GLOM) HSP 1 Score: 80.5 bits (197), Expect = 1.100e-15 Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 1 FSRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 279
+ ++H ECN IER WG +K RR C Y+ L+K++P L S+ ++ IRK+AR SW Y++AY GL+G + K+ HR + ++ ++
Sbjct: 411 YPKFHCECNFIERFWGFAKRETRRICSYNFAELMKQVPEVLVSVPVTTIRKFARKSWRYMDAYDKGLEGRTAEWAVSKYKSHRRIPENIEKLM 503
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A1Y2GP19_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GP19_9FUNG) HSP 1 Score: 74.7 bits (182), Expect = 2.050e-14 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 1 FSRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHR 249
+ +YH E N IE WG SK R CDY+ K L + +PA L+S+++ IRK+AR S+ Y++AY GL G + KK+ HR
Sbjct: 123 YPKYHCELNFIEMFWGASKRYTRANCDYTFKGLQETIPAALASVTILSIRKYARRSFRYMDAYRKGLSGRVAELQAKKYKSHR 205
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A2N0RQZ2_9GLOM (Uncharacterized protein n=4 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N0RQZ2_9GLOM) HSP 1 Score: 76.3 bits (186), Expect = 3.490e-14 Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 1 FSRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDG 207
+ ++H ECN IER WG +K RR C Y+ L+KR+P L S+ ++ IRK+AR SW Y++AY GL+G
Sbjct: 504 YPKFHCECNFIERFWGFAKRETRRICSYNFADLMKRVPEVLISVPITTIRKFARKSWRYMDAYDKGLEG 572
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Match: A0A1E3Q3R2_LIPST (Uncharacterized protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3Q3R2_LIPST) HSP 1 Score: 71.6 bits (174), Expect = 3.550e-14 Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 1 FSRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAY 189
+ R+H ECN IERVWG +K R CDYS SL +R+P L ++ + IRK+AR SW ++EAY
Sbjct: 2 YPRFHCECNFIERVWGETKRRARLDCDYSYSSLKQRVPVILDTIPVEKIRKFARRSWRFIEAY 64 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig707.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig707.20.1 >prot_P-littoralis_Contig707.20.1 ID=prot_P-littoralis_Contig707.20.1|Name=mRNA_P-littoralis_Contig707.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=93bp FSRYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRback to top mRNA from alignment at P-littoralis_Contig707:79243..79521+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig707.20.1 ID=mRNA_P-littoralis_Contig707.20.1|Name=mRNA_P-littoralis_Contig707.20.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=279bp|location=Sequence derived from alignment at P-littoralis_Contig707:79243..79521+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig707:79243..79521+ >mRNA_P-littoralis_Contig707.20.1 ID=mRNA_P-littoralis_Contig707.20.1|Name=mRNA_P-littoralis_Contig707.20.1|organism=Pylaiella littoralis U1_48|type=CDS|length=279bp|location=Sequence derived from alignment at P-littoralis_Contig707:79243..79521+ (Pylaiella littoralis U1_48)back to top |