mRNA_P-littoralis_Contig7.87.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig7.87.1
Unique NamemRNA_P-littoralis_Contig7.87.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: A0A6H5LBB4_9PHAE (TsaA-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBB4_9PHAE)

HSP 1 Score: 803 bits (2075), Expect = 2.660e-279
Identity = 450/642 (70.09%), Postives = 499/642 (77.73%), Query Frame = 3 
Query:  261 MGPTIAIALPNMLALSSALVVGFTVGRLVADCGKKETTPSSSSTGSTXXXGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KKKLAPGCLALDAWTRVARSYIKSIGAGDYESLLLLPRAAFIVAGRFTAHAECSRYLVSLGQARAATAGVEQLRILYVNCSWASVGGGEWTSWAVRDFETTRQFLQRNPDISFVYVGRSCVAGSSA--GAARSTQLRHVVPALLRSDAVLVLPRQAEGRGGDGNSTVPEHAAYTDLRL---GSWSRMELAVAAVGQAKVFVAFRAEPFPELVLELQLGKIDVGAMTKQAADALTRGAEK--SKKNAGLAAAACANWLAADLNPLSALEEARGVVAAALKSDDGDVLESIRSMRPIRAAEITASARASMGEEYVEGERELALSMLLFTVLCSQPKERATYTDGFMDDAAKMEISYRPIAVVRSPYRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEALKDLCGFDMIWVISHMHLNKGWNPKVRPPRLPEDRKGLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDALGSDHEAQGDFLPKFSVGATLVHTATGPTSMPGSPTKPVAERP 2162
            MGPT+A+   N+LALSSALVVG+ VGR     GKKET     S       GAK                     XXXXXXXXXXXXXXXXX    KKKLAP CLALDAWTRVARSYIKSIG GDYESLLLLPR  FIVAGRF  +AEC   LVSLGQARAATAGVEQLR+LYV+CSWAS GGGE T WAV+DFETTR +LQRNPD+SFVYVGRSCV GSS+  G  RSTQLRHV PALLRSDAVLVLPR A+  GG+  S       YTD      GS SRM LA+AAVGQAKVFVAFRA  +PE V+EL+LGK +V A  KQA DAL   A K   K  A +   AC NWL ADLNPLSALE+AR VV  A +SDDG+ LE+I+SMRP  A    A+ARA++G+E++  ERELALSMLLF VLCSQ KERATYT+ F++D  KMEISY P+AVVRSPYRERFGTPRQPQVTASVLHGGAQ+G+++F +G GYEEAL+DL GFDMIWV++HMHLNKGWNPKVRPPRLPE+RKGLFSTRSPHRPNAIALS+LRVGRVDAA GVIYVHGLDLLDGTPVLD+KPYIGYCDAFPN+KAGWLDALGSDHE QGDFLPKFSVGATLVHT  G      SPT+  + +P
Sbjct:    1 MGPTVAVVAANILALSSALVVGYAVGRFEGGGGKKETQQHPCSV-----RGAKRRARIKKSEDNSRARAAGLASXXXXXXXXXXXXXXXXXTRSRKKKLAPRCLALDAWTRVARSYIKSIGEGDYESLLLLPRECFIVAGRFVPYAECRDQLVSLGQARAATAGVEQLRVLYVSCSWASAGGGEGTGWAVQDFETTRAYLQRNPDLSFVYVGRSCVVGSSSSTGHVRSTQLRHVAPALLRSDAVLVLPRLAKSPGGEEGSG-STGTRYTDFECSARGSRSRMVLAIAAVGQAKVFVAFRAGSYPESVVELELGKSNVRATAKQAVDALRAAAAKRPQKSTAAVVEEACENWLGADLNPLSALEQARAVVEEAQRSDDGEALENIQSMRP--APSFAANARAALGDEFIGEERELALSMLLFAVLCSQRKERATYTENFVEDVGKMEISYCPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHERQGDFLPKFSVGATLVHTDAGSKR---SPTRTASRKP 631
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BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: A0A835YNQ9_9STRA (TsaA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ9_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.660e-63
Identity = 103/161 (63.98%), Postives = 125/161 (77.64%), Query Frame = 3 
Query: 1590 IAVVRSPYRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEALKDLCGFDMIWVISHMHLNKGWNPKVRPPRLPEDRKGLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDALGSDHEAQGDFLP 2072
            I VVRSPY+ERFGTPRQ  VTA VL G AQ G+L+F +G  +E AL+DL GFD +WVIS+MHLN+GWNPKV+PPR P  ++GLFSTRSPHRPN+IALSA+++  VD     + V GLDLLDGTP+LD+KPY+ YCDAFP  K GWL+ L S  E   D+LP
Sbjct:    6 IGVVRSPYKERFGTPRQANVTAGVLEGKAQHGQLVFSRGRNFEVALEDLDGFDYVWVISYMHLNQGWNPKVKPPRGPRVKRGLFSTRSPHRPNSIALSAVKIVSVDPKGLTVTVEGLDLLDGTPILDIKPYVPYCDAFPGAKTGWLEELSSIDEV--DYLP 164
[Close]
BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: A0A7S3XP01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP01_HETAK)

HSP 1 Score: 206 bits (523), Expect = 1.730e-56
Identity = 105/187 (56.15%), Postives = 130/187 (69.52%), Query Frame = 3 
Query: 1521 KERATYTDGFMDDAAKMEISYRPIAVVRSPYRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEALKDLCGFDMIWVISHMHLNKGWNPKVRPPRLPEDRK-GLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWL---DALGSDHEAQGDFL 2069
            K +  YT+ F    +   +S   IAVVRSPY+ERFGTPRQP VT   L G AQ GE++F K   +E AL+DL GF+  W+I++ HLNKGWNPKV+PPR   D K GLF+TRSPHRPN I LSA ++  VD  +GV+ V GLDLLDGTPVLD+KPY+ Y DAFP+ +AGWL   D +  D  A+ D L
Sbjct:   55 KPQQFYTEQFTTPES---VSMETIAVVRSPYKERFGTPRQPVVTKGTLGGSAQIGEIVFKKNRNFEIALQDLEGFEYCWLITYFHLNKGWNPKVKPPRGKHDAKLGLFATRSPHRPNPIGLSACKIHSVDHRQGVVRVAGLDLLDGTPVLDLKPYVPYADAFPHARAGWLNSSDRVTVDDLAEADRL 238
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BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: R1DL83_EMIHU (TsaA-like domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DL83_EMIHU)

HSP 1 Score: 198 bits (504), Expect = 2.770e-53
Identity = 99/180 (55.00%), Postives = 122/180 (67.78%), Query Frame = 3 
Query: 1536 YTDGFMDDAAKMEISYRPIAVVRSPYRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEALKDLCGFDMIWVISHMHLNKGWNPKVRPPRLPEDRK-GLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDALGSDHEAQGDFLP 2072
            YTD F D AA   ++  PI V+RSPY+ERFGTPRQP VT  V  GGAQ+G +      G +  L+ L GFD  W I+ MHLN GW P VRPPR P   K G+F+TR+PHRPN IALSAL+V  VD A   + V GLDLLDGTPVLD+KPY+ Y D+FP  KAGW+D + ++ +  G + P
Sbjct:   32 YTDAFADHAAA-PVTLTPIGVIRSPYKERFGTPRQPTVTTQVSGGGAQRGCIELRPDAGLDHTLRGLAGFDYCWAITLMHLNAGWKPLVRPPRGPRRAKQGVFATRAPHRPNPIALSALKVVEVDEAALRVTVEGLDLLDGTPVLDLKPYVPYADSFPRAKAGWVDEVRAEEDRLGYWPP 210
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BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: A0A7S1WEL1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WEL1_ALECA)

HSP 1 Score: 194 bits (492), Expect = 1.050e-52
Identity = 89/174 (51.15%), Postives = 124/174 (71.26%), Query Frame = 3 
Query: 1536 YTDGFMDDAAKMEISYRPIAVVRSPYRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEAL--KDLCGFDMIWVISHMHLNKGWNPKVRPPRLPEDRKGLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDALGSDHE 2051
            +TD F      ++++ R I VVRSPY+ERFG PRQP ++  VL G AQ+G + F      + AL  KDL GF+ IW++ ++HLN+GW+P+V PPR    ++GLF+TRSPHRPN I+LSA ++  VDA    + V GLDLLDGTPVLDVKPY+ YCD++P+ +AGW+D +  +H+
Sbjct:   31 HTDAF---PTPLQVTLRTIGVVRSPYKERFGCPRQPPISKGVLGGSAQEGTIQFLDNPDGDIALALKDLEGFERIWIVGYLHLNEGWSPRVTPPRGARQKRGLFATRSPHRPNHISLSACQLLSVDAKAKTLTVRGLDLLDGTPVLDVKPYVPYCDSYPSARAGWIDEVEGEHD 201
[Close]
BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: A0A2V3J262_9FLOR (tRNA (Adenine(37)-N6)-methyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J262_9FLOR)

HSP 1 Score: 194 bits (493), Expect = 4.280e-52
Identity = 93/173 (53.76%), Postives = 119/173 (68.79%), Query Frame = 3 
Query: 1536 YTDGFMDDAAKMEISYRPIAVVRSPYRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEALKDLCGFDMIWVISHMHLNKGWNPKVRPPRLPEDRKGLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDALGSDHEA 2054
            YTD F       ++S   I VVRS Y+ERFGTPRQP VT + L    Q   +  ++   Y+ AL+ L  F+  WVIS+ HLN+G+NP V PPR P  ++G+F+TRSPHRPN+I LS +R+  VD  KG+I+V G+DLLDGTPVLDVKPY+ YCD+FP  KAGWLD L  D +A
Sbjct:   55 YTDDF---ETPTQVSLNTIGVVRSLYKERFGTPRQPNVTKNTLGNQMQPATIQLYESCKYDLALRGLAQFEYCWVISYFHLNQGFNPLVTPPRGPRKKQGVFATRSPHRPNSIGLSCIRITGVDEKKGLIHVLGVDLLDGTPVLDVKPYVPYCDSFPKAKAGWLDTLREDMKA 224
[Close]
BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: A0A0G4F040_VITBC (TsaA-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F040_VITBC)

HSP 1 Score: 191 bits (486), Expect = 2.970e-51
Identity = 101/191 (52.88%), Postives = 126/191 (65.97%), Query Frame = 3 
Query: 1548 FMDDAAKME-ISYRPIAVVRSPYRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEALKDLCGFDMIWVISHMHLNKGWNPKVR--PPRLPEDRKGLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDALGSDHEAQ------GDFLPKFSVGAT 2093
            + +DA   E I   PI VVRSPY+ERFGTPRQP VT   L G  Q   +   +GHGYE  L+D+ GF+ +W+I++MHLN+GW  KVR  P +LP  R GLF+TR+PHRPN +ALSA+ V  VD   G +++ GLDLLDGTPVLD+KPY+ Y DAFP+  AGWLD    D E Q      G  LP +  G T
Sbjct:   77 YAEDADVPEAIEMHPIGVVRSPYKERFGTPRQPVVTEGTLGGVKQNATVQLLRGHGYEACLEDVEGFERVWLITYMHLNQGWRSKVRVYPRKLPR-RLGLFATRAPHRPNQLALSAVEVVGVDVDAGQLHILGLDLLDGTPVLDIKPYVPYADAFPDSAAGWLDQY--DREQQMGRDEFGHELPPWCAGDT 264
[Close]
BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: A0A812QIS2_9DINO (TrmO protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812QIS2_9DINO)

HSP 1 Score: 192 bits (487), Expect = 3.020e-51
Identity = 99/182 (54.40%), Postives = 127/182 (69.78%), Query Frame = 3 
Query: 1536 YTDGFMDDAAKMEISYRPIAVVRSPYRERFGTPRQPQVTASVLHGGAQQG--ELIFFKGHGYEE---ALKDLCGFDMIWVISHMHLNKGWNPKVRPPRLPEDRKGLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDAL----GSDHEA 2054
            +TD F      ME+S + +AVVRSPY+ERFG PRQP VT  VL G A  G  EL+    +  E+   AL++L GF+ IWVIS++H+N+GW+  V PPR P  ++GLF+TR+PHRPN I LSA R+  VDAAK  + VHGLDLLDGTPVLD+KPY+ YCD+F   +AGWL+ +    G DH A
Sbjct:   74 HTDAF---PTPMEVSMQTLAVVRSPYKERFGCPRQPTVTEGVLGGEAGAGFLELVPSDQNPEEKLRMALRELSGFEFIWVISYLHMNEGWSASVTPPRGPRRKRGLFATRAPHRPNHIGLSACRLLGVDAAKLQVSVHGLDLLDGTPVLDIKPYVPYCDSFAGARAGWLEEIDEANGRDHLA 252
[Close]
BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: UPI001AD54E4C (tRNA (Adenine(37)-N6)-methyltransferase n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI001AD54E4C)

HSP 1 Score: 188 bits (477), Expect = 3.470e-51
Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = 3 
Query: 1560 AAKME-ISYRPIAVVRSPYRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEALKDLCGFDMIWVISHMHLNKGWNPKVRPPRLPEDRKGLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDALGSD 2045
            AA++E +    I  V SPY+ERFGTPRQP VT   L   AQ+  +    G  +E+ALKDL GF+ IWV++ +HLN+GWNP+V PPR P+ ++GLF+TR+PHRPN+I LSAL++  +D     + V G+DLLDGTPVLD+KPYI Y DAFP  +AGWL+ L SD
Sbjct:   14 AARVERVECEIIGYVHSPYKERFGTPRQPPVTEQTLDDRAQEAMIELVPGRNFEQALKDLEGFEYIWVLAWLHLNEGWNPQVIPPRGPKVKRGLFATRAPHRPNSIGLSALKLVGIDGR--TLKVSGIDLLDGTPVLDIKPYIPYSDAFPKARAGWLEGLKSD 174
[Close]
BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Match: A0A7S3A0C0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0C0_9RHOD)

HSP 1 Score: 189 bits (480), Expect = 8.440e-51
Identity = 87/154 (56.49%), Postives = 108/154 (70.13%), Query Frame = 3 
Query: 1575 ISYRPIAVVRSPYRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEALKDLCGFDMIWVISHMHLNKGWNPKVRPPRLPEDRKGLFSTRSPHRPNAIALSALRVGRVDAAKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDAL 2036
            +S + I VVRSPY+ERFGTPRQ  V    +    Q GE+       YE AL+ L GFD  WVI  MHLN GWNP V PPR P  ++G+F+TR+PHRPN I+LSAL++ RVD    +++V GLDLLDGTP+LD+KPY+ Y DAFPN  AGWLD +
Sbjct:   48 MSVQAIGVVRSPYKERFGTPRQATVWEQSIGNAPQDGEIHLIGDPRYEHALRGLDGFDYCWVICWMHLNTGWNPLVTPPRGPRTKQGIFATRAPHRPNPISLSALKITRVDYKNRIVHVKGLDLLDGTPILDIKPYVPYADAFPNAAAGWLDNI 201
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LBB4_9PHAE2.660e-27970.09TsaA-like domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YNQ9_9STRA2.660e-6363.98TsaA-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3XP01_HETAK1.730e-5656.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1DL83_EMIHU2.770e-5355.00TsaA-like domain-containing protein n=1 Tax=Emilia... [more]
A0A7S1WEL1_ALECA1.050e-5251.15Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A2V3J262_9FLOR4.280e-5253.76tRNA (Adenine(37)-N6)-methyltransferase n=1 Tax=Gr... [more]
A0A0G4F040_VITBC2.970e-5152.88TsaA-like domain-containing protein n=2 Tax=Vitrel... [more]
A0A812QIS2_9DINO3.020e-5154.40TrmO protein n=1 Tax=Symbiodinium sp. CCMP2456 Tax... [more]
UPI001AD54E4C3.470e-5155.21tRNA (Adenine(37)-N6)-methyltransferase n=2 Tax=Pl... [more]
A0A7S3A0C0_9RHOD8.440e-5156.49Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:428383..432701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FI01
PFAMsChloroa_b-bind,UPF0066
Model size3239
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons4
Evalue3.93e-288
EggNOG OGsCOG1720@1|root,KOG2942@2759|Eukaryota
Ec32 ortholog descriptionTsaA-like domain
Ec32 orthologEc-12_006540.1
DescriptiontRNA (adenine-N6-)-methyltransferase activity
Cds size1953
COG categoryV
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.87.1prot_P-littoralis_Contig7.87.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig7 429409..432441 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791451.5600893-UTR-P-littoralis_Contig7:428382..4294081680791451.5600893-UTR-P-littoralis_Contig7:428382..429408Pylaiella littoralis U1_48UTRP-littoralis_Contig7 428383..429408 -
1680791451.622357-UTR-P-littoralis_Contig7:432441..4327011680791451.622357-UTR-P-littoralis_Contig7:432441..432701Pylaiella littoralis U1_48UTRP-littoralis_Contig7 432442..432701 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791451.5712433-CDS-P-littoralis_Contig7:429408..4296681680791451.5712433-CDS-P-littoralis_Contig7:429408..429668Pylaiella littoralis U1_48CDSP-littoralis_Contig7 429409..429668 -
1680791451.5881479-CDS-P-littoralis_Contig7:430040..4302771680791451.5881479-CDS-P-littoralis_Contig7:430040..430277Pylaiella littoralis U1_48CDSP-littoralis_Contig7 430041..430277 -
1680791451.60297-CDS-P-littoralis_Contig7:430640..4307351680791451.60297-CDS-P-littoralis_Contig7:430640..430735Pylaiella littoralis U1_48CDSP-littoralis_Contig7 430641..430735 -
1680791451.6128583-CDS-P-littoralis_Contig7:431080..4324411680791451.6128583-CDS-P-littoralis_Contig7:431080..432441Pylaiella littoralis U1_48CDSP-littoralis_Contig7 431081..432441 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig7.87.1

>prot_P-littoralis_Contig7.87.1 ID=prot_P-littoralis_Contig7.87.1|Name=mRNA_P-littoralis_Contig7.87.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=651bp
MGPTIAIALPNMLALSSALVVGFTVGRLVADCGKKETTPSSSSTGSTSTR
GAKRRARIRKSEDNSRARAAGLASPSSTETSQRNKNLSRRTRNRKKKLAP
GCLALDAWTRVARSYIKSIGAGDYESLLLLPRAAFIVAGRFTAHAECSRY
LVSLGQARAATAGVEQLRILYVNCSWASVGGGEWTSWAVRDFETTRQFLQ
RNPDISFVYVGRSCVAGSSAGAARSTQLRHVVPALLRSDAVLVLPRQAEG
RGGDGNSTVPEHAAYTDLRLGSWSRMELAVAAVGQAKVFVAFRAEPFPEL
VLELQLGKIDVGAMTKQAADALTRGAEKSKKNAGLAAAACANWLAADLNP
LSALEEARGVVAAALKSDDGDVLESIRSMRPIRAAEITASARASMGEEYV
EGERELALSMLLFTVLCSQPKERATYTDGFMDDAAKMEISYRPIAVVRSP
YRERFGTPRQPQVTASVLHGGAQQGELIFFKGHGYEEALKDLCGFDMIWV
ISHMHLNKGWNPKVRPPRLPEDRKGLFSTRSPHRPNAIALSALRVGRVDA
AKGVIYVHGLDLLDGTPVLDVKPYIGYCDAFPNMKAGWLDALGSDHEAQG
DFLPKFSVGATLVHTATGPTSMPGSPTKPVAERPTQEVFEKKISRCHVVK
*
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mRNA from alignment at P-littoralis_Contig7:428383..432701-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig7.87.1 ID=mRNA_P-littoralis_Contig7.87.1|Name=mRNA_P-littoralis_Contig7.87.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4319bp|location=Sequence derived from alignment at P-littoralis_Contig7:428383..432701- (Pylaiella littoralis U1_48)
GCAGCACCAACTCTGTTGACGTTATACCGGCCTCGAACGTGATGATCCCA
ATTTCCATGTGATATCCATTTCTGCTGTCGGTGTTACGGCCAACGTCGAC
AAATTCTGCGGAGAAAAATCAGGTCCAGACTCGGAGAGTCTGTCGCGTAC
AGAGAGAAAGACGTGCATAAACACACCGAGCGCTACGCTGCTGTACCTGG
GACAAAAGACGGCAGCAGTCATCGGATCTTTCATTTTCGCTCGACCAAGG
GGTAACAGCAATGGGCCCAACCATTGCCATTGCTCTTCCCAACATGTTGG
CTCTGTCTTCGGCCTTGGTAGTTGGGTTTACGGTTGGAAGGTTAGTCGCC
GATTGCGGCAAAAAGGAGACAACACCGAGCAGCAGCAGCACCGGCAGCAC
CAGCACCAGAGGGGCCAAGCGCCGAGCTCGGATACGGAAGAGCGAGGACA
ATTCCAGGGCGAGAGCTGCCGGGCTGGCGTCCCCATCTTCGACAGAGACA
AGCCAGAGAAACAAAAACCTATCGCGGAGAACGCGGAATCGCAAGAAAAA
GTTGGCGCCTGGCTGTCTCGCGCTCGATGCATGGACTCGGGTTGCAAGAT
CCTATATCAAGAGCATCGGGGCGGGAGACTACGAGTCACTTCTGCTGCTT
CCGAGAGCGGCCTTTATCGTCGCCGGGAGATTCACAGCCCACGCAGAATG
CAGCAGATACCTTGTTTCGCTTGGGCAGGCGAGAGCGGCCACTGCTGGCG
TCGAGCAGCTACGCATTCTCTACGTGAATTGCTCGTGGGCGAGTGTTGGG
GGTGGGGAGTGGACGAGCTGGGCGGTTCGGGACTTTGAGACCACGCGCCA
GTTCCTTCAGCGTAACCCCGATATCTCGTTTGTTTACGTCGGTCGATCCT
GCGTGGCGGGGAGCTCCGCCGGGGCAGCGAGGTCGACACAGCTGCGCCAT
GTTGTACCAGCTCTCCTTCGGTCGGATGCCGTCCTTGTCCTCCCACGCCA
GGCGGAAGGGCGTGGAGGCGATGGAAACTCTACAGTCCCAGAGCACGCTG
CTTACACCGACCTCAGGCTCGGTTCTTGGTCTCGAATGGAGCTTGCCGTG
GCCGCCGTCGGCCAGGCGAAGGTGTTCGTCGCTTTCCGCGCCGAGCCATT
CCCTGAATTGGTCTTGGAGCTCCAGCTAGGGAAGATCGACGTAGGAGCAA
TGACGAAGCAAGCTGCGGATGCACTCACAAGGGGTGCGGAGAAGTCAAAG
AAGAACGCGGGGTTGGCGGCGGCAGCATGTGCCAACTGGCTCGCCGCAGA
CCTGAACCCTCTTTCAGCACTCGAGGAGGCCAGGGGGGTAGTGGCCGCTG
CGCTGAAGTCGGATGACGGCGATGTTCTAGAGAGTATCCGAAGCATGCGA
CCAATTCGAGCAGCCGAAATTACGGCGAGCGCGCGAGCCTCTATGGGCGA
GGAGTACGTAGAAGGCGAGCGGGAGCTTGCGCTGTCGATGCTGCTGTTTA
CGGTGCTTTGTTCGCAACCCAAGGAGCGTGCCACTTACACGGACGGCTTC
ATGGACGACGCGGCTAAAATGGAGATATCTTACCGCCCCATTGCGGTGGT
AAGATCACCTTACCGTGAGAGGTAGGATGTTGTTCGAGTATACCCCATAT
TTGAGTTTACCCCATATTTACTCTTTTGAACGGTCGGGTGCTATACGGGT
GTCCTACTATTTTCGTTGTGCAGCTTTGCACCCTGTTTCTCAAGTAATTG
TGTGCGCTCTTGCCTGAGCGTCTGTCGTGGCTACTGCCTTCCAATTCCAT
CGTGTGTGATAGAAATGAACCCGCATTGCTGTAGTCTAATCTACGCATGT
GGTGATCAATTTGTATTTTTGGTCGAGATCAACAACCATCTATGAACGCT
CTCTCCCCCAAAATATCACACCCACAAGAACACAAGCAATCGCTGCCATA
CTTGCTCGTGTAAAAGGTTTGGGACGCCGCGGCAACCGCAAGTGACCGCC
TCGGTGCTGCATGGGGGAGCTCAGCAAGGGGAGCTTATTTTTTTCAAGGG
GCATGGCTACGGTACGTATGTACAATAATAGCGTGATGCTCGAAGAAAGA
TGTCCTTGTTGCCTCGCTGTAAAGTGGTTCGATTGGTGCCGTGCTCTCCT
TTTCATCGAGAGACCATCTTGGACTGACAGTTTCATGTAGCACATTGCGA
TGATGCCCTTCGTTAAAGCCTCGTACGCATACTGTACCCGCCACTGCTCT
TGCTGTTGTCATATCATGATATAAAGCAGCCACGCTTGATCTGCGAAGAA
CGCTCTTCCTCATATCGCTCCTGTGCTTCGTACGTTATTCTGGCCGCGAA
AGATGAGCGGCAGCTAAACCATTCAACGATGATATCCACGCCTGCTCCCT
GTGTTTGTCATTCGATGCCGACAGAGGAAGCGTTGAAAGATTTATGCGGT
TTTGACATGATCTGGGTGATCTCCCACATGCACCTCAACAAGGGATGGAA
TCCCAAGGTCCGCCCCCCCCGTCTACCGGAGGACCGCAAGGGCCTGTTCT
CCACCCGAAGCCCACATAGGCCGAATGCAATTGCCCTATCGGCCCTACGC
GTGGGTCGGGTAGATGCGGCAAAGGGTGTGATTTACGTGCACGGCCTGGA
CCTACTCGATGGTGAGGGGGAAACGCTCAAATCATCTTATGCGAACAGCG
TGTGCATGCACGTGTCTTTTGTGTACTTGTTGGGTTTCTTTATTGTAAGC
CTCATGTGTACCTGATATGTATCAAGTTGCGAAACGGCGCGTGCGTTGTT
TCAGTTGTGAATATTAAGTTGCAGAAATGTTTGGGATTGTTTATTTTTTG
TCGAGAGGATCACATCCTGCCACGCCCTCCTTCCGCTCCGCTGTTCTGGA
GTTGGATTTACAGCCTGATGGCTAGCCTCGTGCGTCTGCGGCTATATCGT
CTTGACACGGCTAATTTCTTCGTATCAACATTTTTACTTGGCTCGGTTGT
TCGTCGCCACTGGTGCTAAACGTTGCCTGACAGGTACGCCCGTTCTAGAC
GTGAAACCCTATATTGGCTACTGCGACGCATTTCCCAACATGAAGGCCGG
CTGGCTAGATGCTCTTGGGTCAGATCACGAGGCCCAGGGAGATTTCCTGC
CCAAGTTTAGCGTGGGTGCTACGCTGGTGCACACTGCCACTGGTCCCACG
AGCATGCCAGGCTCTCCTACCAAACCGGTGGCCGAACGACCTACGCAAGA
GGTTTTTGAAAAAAAAATCTCGCGATGCCATGTGGTAAAATGAACAGTAT
TGCATTTGAAAGCAGCAGAGTACAAGAATCATACTTCGAAGTATGATGTA
GCGTGCCTGGCATTGTTTAAAGCTATCTGACGGTTCCGCGACGGAGTGCG
ATATTTTGGGAGCTGTCGTTCACCGGTTTGTGTCCTCATAGCAGCAGTAC
TGCATCAAAGGGCGGCGGAGCAGGTATGTGCCAGGAGGTGTTAAGCGGTA
GAGAAGGTAAAAAGAGGCAGGTGGCGATTCACCAAACACGTCGGTCAGCT
TCAAGCCATCCCAGTATAACGTGTTCGTTGATTTCCTTTGCTCGAACGAT
GGTCTCACTTTGAGCCCTGAGTTTTAAATACGTATCATACGTTATACGTA
CCCAAAAGTGGTGAACGTCCAGCAAGTAGTACTGCTGTACCGGTATGTCT
CCTGGAGCGTTTTGATTTTATTTATTTTGAGCCCAGCGCCAGTTAGAGCT
GGGACTACACATGTCATGATATTTTTGTTGTACCCTAGATATGGAAAGTC
ATGTTGTCGCTGCCGTCGCCAGATGCACCAAGATCGGGCGAACTTTGGAC
GAAGAAGCCCCCGTTGTTGCCACCATCGCGGGGTATCAAAGCTGTACTTT
GTCGATCCTTGCGTTCTCCTCTATCTGTGTCACGGGTTAGCCACACGCGT
GCGCGTTTGTGGGTGTGGGTGTGGTTGGGGGTGTGGGTGTAGGCGTGGGT
ATAGGTGTTGGTGTGTTGTGTATTGTCATCATATACGTGCATTATTCTGA
CGCAAGTTCATTCTGGACGCCAGTCTTCACCTTTTGGTACAAGTTGGGCG
CAACAGCCGGGGTGGTCACAAAGCAGGAGGAGAGTCAACACTGATGTGTT
TTTTCCTTCCACCCTTCCTTCTGCGTTGCTTGCCTTGAATTTTATCGCGA
GAAGGGTTCGACCCTGGTCCTTTCCCTCATCGATTCTCGCGTCCAATTTC
GTTCACTCGCGTATAATTCTTGTTCTTCTGGCCGTCTCGCCGACATTTAT
TTCCACATGTCGTCAGTCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig7:428383..432701-

>mRNA_P-littoralis_Contig7.87.1 ID=mRNA_P-littoralis_Contig7.87.1|Name=mRNA_P-littoralis_Contig7.87.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1953bp|location=Sequence derived from alignment at P-littoralis_Contig7:428383..432701- (Pylaiella littoralis U1_48)
ATGGGCCCAACCATTGCCATTGCTCTTCCCAACATGTTGGCTCTGTCTTC
GGCCTTGGTAGTTGGGTTTACGGTTGGAAGGTTAGTCGCCGATTGCGGCA
AAAAGGAGACAACACCGAGCAGCAGCAGCACCGGCAGCACCAGCACCAGA
GGGGCCAAGCGCCGAGCTCGGATACGGAAGAGCGAGGACAATTCCAGGGC
GAGAGCTGCCGGGCTGGCGTCCCCATCTTCGACAGAGACAAGCCAGAGAA
ACAAAAACCTATCGCGGAGAACGCGGAATCGCAAGAAAAAGTTGGCGCCT
GGCTGTCTCGCGCTCGATGCATGGACTCGGGTTGCAAGATCCTATATCAA
GAGCATCGGGGCGGGAGACTACGAGTCACTTCTGCTGCTTCCGAGAGCGG
CCTTTATCGTCGCCGGGAGATTCACAGCCCACGCAGAATGCAGCAGATAC
CTTGTTTCGCTTGGGCAGGCGAGAGCGGCCACTGCTGGCGTCGAGCAGCT
ACGCATTCTCTACGTGAATTGCTCGTGGGCGAGTGTTGGGGGTGGGGAGT
GGACGAGCTGGGCGGTTCGGGACTTTGAGACCACGCGCCAGTTCCTTCAG
CGTAACCCCGATATCTCGTTTGTTTACGTCGGTCGATCCTGCGTGGCGGG
GAGCTCCGCCGGGGCAGCGAGGTCGACACAGCTGCGCCATGTTGTACCAG
CTCTCCTTCGGTCGGATGCCGTCCTTGTCCTCCCACGCCAGGCGGAAGGG
CGTGGAGGCGATGGAAACTCTACAGTCCCAGAGCACGCTGCTTACACCGA
CCTCAGGCTCGGTTCTTGGTCTCGAATGGAGCTTGCCGTGGCCGCCGTCG
GCCAGGCGAAGGTGTTCGTCGCTTTCCGCGCCGAGCCATTCCCTGAATTG
GTCTTGGAGCTCCAGCTAGGGAAGATCGACGTAGGAGCAATGACGAAGCA
AGCTGCGGATGCACTCACAAGGGGTGCGGAGAAGTCAAAGAAGAACGCGG
GGTTGGCGGCGGCAGCATGTGCCAACTGGCTCGCCGCAGACCTGAACCCT
CTTTCAGCACTCGAGGAGGCCAGGGGGGTAGTGGCCGCTGCGCTGAAGTC
GGATGACGGCGATGTTCTAGAGAGTATCCGAAGCATGCGACCAATTCGAG
CAGCCGAAATTACGGCGAGCGCGCGAGCCTCTATGGGCGAGGAGTACGTA
GAAGGCGAGCGGGAGCTTGCGCTGTCGATGCTGCTGTTTACGGTGCTTTG
TTCGCAACCCAAGGAGCGTGCCACTTACACGGACGGCTTCATGGACGACG
CGGCTAAAATGGAGATATCTTACCGCCCCATTGCGGTGGTAAGATCACCT
TACCGTGAGAGGTTTGGGACGCCGCGGCAACCGCAAGTGACCGCCTCGGT
GCTGCATGGGGGAGCTCAGCAAGGGGAGCTTATTTTTTTCAAGGGGCATG
GCTACGAGGAAGCGTTGAAAGATTTATGCGGTTTTGACATGATCTGGGTG
ATCTCCCACATGCACCTCAACAAGGGATGGAATCCCAAGGTCCGCCCCCC
CCGTCTACCGGAGGACCGCAAGGGCCTGTTCTCCACCCGAAGCCCACATA
GGCCGAATGCAATTGCCCTATCGGCCCTACGCGTGGGTCGGGTAGATGCG
GCAAAGGGTGTGATTTACGTGCACGGCCTGGACCTACTCGATGGTACGCC
CGTTCTAGACGTGAAACCCTATATTGGCTACTGCGACGCATTTCCCAACA
TGAAGGCCGGCTGGCTAGATGCTCTTGGGTCAGATCACGAGGCCCAGGGA
GATTTCCTGCCCAAGTTTAGCGTGGGTGCTACGCTGGTGCACACTGCCAC
TGGTCCCACGAGCATGCCAGGCTCTCCTACCAAACCGGTGGCCGAACGAC
CTACGCAAGAGGTTTTTGAAAAAAAAATCTCGCGATGCCATGTGGTAAAA
TGA
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