mRNA_P-littoralis_Contig7.61.3 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: D7FS17_ECTSI (PNP_UDP_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS17_ECTSI) HSP 1 Score: 355 bits (911), Expect = 7.010e-113 Identity = 198/299 (66.22%), Postives = 218/299 (72.91%), Query Frame = 3
Query: 99 YLLHANAVPLTADRRVLHLELGEGDVANNIVTVGSEARSEILASLLTATTTR---------------------------------RSKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPAVATMTKTTTIGDGSSAAAHQRGEPYVFYGVAPADKGLSEALLQELKRSLGGEIDKAGEAGGDSGATAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQLLHLARLCRKTR 896
YLLHANAVPLTAD RVLHLEL G+VANNIVTVGSE R EILASLL T RSKRGFVTHTG +NGVPVSI+LINMGYPNMDF VREVRAVT GPL IVRLGSCAGLRPDLPVG+VAVASEGS+ I QNPDAW +G++A +GEPY+F+GVAPAD+ LSEALL+ELKRSL G KAG + G G TAVVGCLNASADSFYSSQGRLDPSFEDRN D++ +LL RHP AG+FEMETFQLLHLARLCRK++
Sbjct: 7 YLLHANAVPLTADGRVLHLELRSGEVANNIVTVGSEGRGEILASLLDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAW--------------EGTAARGETQGEPYLFHGVAPADEELSEALLKELKRSLDG---KAGGSDGGGG-TAVVGCLNASADSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSK 287
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: A0A410UCT3_PHYCP (Uridine phosphorylase n=1 Tax=Phytophthora capsici TaxID=4784 RepID=A0A410UCT3_PHYCP) HSP 1 Score: 191 bits (484), Expect = 2.980e-51 Identity = 118/268 (44.03%), Postives = 155/268 (57.84%), Query Frame = 3
Query: 108 HANAVPLTADRRVLHLELGEGDVANNIVTVGSEARSEILASLLTAT--TTRRSKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPAVATMTKTTTIGDGSSAAAHQRGEPYVFYGVAPADKGLSEALLQELKRSLGG-EIDKAGEAGGDSGATAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQLLHLARLCRKTRQS 902
+ NA+P +D VLHL L G VAN IV+VGS R+++LA LL T S RGF T++G GVPVSI+ MG PNMDF+VRE RAV NGP+ I+R G+C +R ++P G+V V +GSI + +NPDA+ P + + Y V P+ LS+AL+ ++ L + A D A V LNA+A SFYSSQGRLD +F+DRNE LV+ L HPD T EMETF LL LA+ R + Q+
Sbjct: 5 NTNAMPTHSDGTVLHLGLRAGQVANRIVSVGSLGRAKVLAQLLDEGHFETFESARGFTTYSGKVKGVPVSIVATGMGVPNMDFVVRETRAVVNGPMTIIRFGTCGAVREEVPPGSVVVNGKGSIMVTRNPDAFFPGASEE------------------DCYRVSRVMPSSSTLSKALVASMEDKLTALRAEPVIAASSDCDALRVFDGLNATACSFYSSQGRLDSNFDDRNEKLVEDLTTAHPDLYTVEMETFHLLDLAQRSRGSIQA 254
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: A0A7S1RXB5_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RXB5_ALECA) HSP 1 Score: 189 bits (479), Expect = 2.150e-50 Identity = 112/255 (43.92%), Postives = 148/255 (58.04%), Query Frame = 3
Query: 141 RVLHLELGEGDVANNIVTVGSEARSEILASLLTATTTR------RSKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPAVATMTKTTTIGDGSSAAAHQRGEPYVFYGVAPADKGLSEALLQELKRSLGGEIDKAGEAGGDSGATAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQLLHLARLCR 887
RVLHL L +G+++ I+ VG AR+++LA LL T S RGF+T+TG F G VS++ I MG MDF VRE RA GP+ +VRLG+ GL+ +PVG+VAVA+ GSI + +N A+A H PY+ PAD LS A+L+E+++SLG + VG LN +ADSFYSSQGRLDP F D N LV ++ +HP+A T EMETFQLLHLA+ C+
Sbjct: 37 RVLHLGLADGELSGRILAVGHPARADLLAKLLEPEETGGSLFRLASDRGFLTYTGLFKGERVSVVAIGMGLSMMDFFVREARAAVRGPMAVVRLGTSGGLKASVPVGSVAVATGGSILVQRNYGAFA----------------GGEVHNGDSPYLISSPCPADTELSTAVLREVQQSLGEGM--------------AVGGLNVTADSFYSSQGRLDPCFADCNRSLVDDVVRQHPEAVTMEMETFQLLHLAKCCK 261
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: A0A7S2SVQ5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVQ5_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.100e-50 Identity = 113/266 (42.48%), Postives = 160/266 (60.15%), Query Frame = 3
Query: 114 NAVPLTADRRVLHLELGEGDVANNIVTVGSEARSEILASLLTATTTR-----------RSKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPAVATMTKTTTIGDGSSAAAHQRGEPYVFYGVAPADKGLSEALLQELKRSLGGEIDKAGEAGGDSGATAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQLLHLAR 878
NAVP T + +VLH+++G +VA IVTVG+ +R+ +LA + S RGF T+TG +GVP+S+I I MG P MDF++RE+R++ GP+ +VR G+C GL+ +P GTV VA+ GS+ + +NPD++APA +IG S + PY GVAPAD LS A+ EL +L E+ G + G +N +ADSFY SQ R DP+F+DR + L+++LL+R+P T EMETFQL LAR
Sbjct: 45 NAVPRTQEGKVLHVDVGPQEVAPRIVTVGAASRARLLAGHFDGVNGQDPQRVPGVLYHESSRGFTTYTGTVDGVPLSVIAIGMGMPMMDFMIREIRSIVEGPMIMVRYGTCGGLQEQVPEGTVVVAALGSVSVTRNPDSFAPA--------SIGLPSPS-------PYNISGVAPADVLLSNAVGAELSSTLKREV----------GVQTMFG-MNVTADSFYGSQARKDPNFDDRGDGLLESLLSRYPGLMTMEMETFQLFDLAR 284
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: A0A4D9CWQ0_9STRA (PNP_UDP_1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWQ0_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.490e-49 Identity = 116/262 (44.27%), Postives = 150/262 (57.25%), Query Frame = 3
Query: 114 NAVPLTADRRVLHLELGEGDVANNIVTVGSEARSEILASLLTATT---TRRSKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPA-VATMTKTTTIGDGSSAAAHQRGEPYVFYGVAPADKGLSEALLQELKRSLGGEIDKAGEAGGDSGATAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQLLHLARLCR 887
NAVP D LHL L EG +A+ I++VG R+ ++A L ++ + S RGF T+TG F VSII I MG P MDFLVRE R + + PL I R G+C L PD+ VG+V VAS GS+ + +NPDA+ P ++ T I ++ A PY+ + AD L++ALL ELK LG E + G +N SA SFYSSQGR D F+DRNEDL+ L RHP + EME+FQLL LAR R
Sbjct: 35 NAVPRNFDSTTLHLGLKEGQIASRILSVGCPGRAALIAKALDKSSPIFSHTSPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTSSGTSADEINPIATGGAPHVRPPYLVFAPQLADPILTQALLGELKEQLGSEHVRRG--------------MNVSACSFYSSQGRRDVFFDDRNEDLLDMLRERHPSLASMEMESFQLLALARASR 282
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: A0A329RWV8_9STRA (PNP_UDP_1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RWV8_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.770e-49 Identity = 116/268 (43.28%), Postives = 154/268 (57.46%), Query Frame = 3
Query: 108 HANAVPLTADRRVLHLELGEGDVANNIVTVGSEARSEILASLLT--ATTTRRSKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPAVATMTKTTTIGDGSSAAAHQRGEPYVFYGVAPADKGLSEALLQELKRSLGG-EIDKAGEAGGDSGATAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQLLHLARLCRKTRQS 902
+ NA+P +D VLHL + G VAN +V+VGS R+++LA LL T S RGF T TG+ GV VSI+ MG PNMDF+VRE RA+ GP+ I+R G+C +R ++ G+V V+ GS+ I +NPDA+ P G+ E Y V P+ LS+AL+ + LG + A D A +V LNA+A SFYSSQGRLDP+F+DRNE LV+ L H D T EMETF LL LA+ R + Q+
Sbjct: 5 NTNAMPTQSDGTVLHLGVKAGQVANRVVSVGSLGRAKLLAQLLDDGQFETIESARGFTTFTGEMKGVQVSIVATGMGVPNMDFVVRETRAIVEGPMIIIRFGTCGAVRKEIAPGSVVVSGNGSVMITRNPDAFFP--------DATGE----------EYYRVSRVMPSSPALSKALVAAMNDKLGALRAEPIIAASIDRDALSVFDGLNATACSFYSSQGRLDPAFDDRNEQLVENLTKTHQDLYTVEMETFHLLDLAQRSRGSIQA 254
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: G4ZZA4_PHYSP (PNP_UDP_1 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZZA4_PHYSP) HSP 1 Score: 181 bits (460), Expect = 1.430e-48 Identity = 112/256 (43.75%), Postives = 146/256 (57.03%), Query Frame = 3
Query: 108 HANAVPLTADRRVLHLELGEGDVANNIVTVGSEARSEILASLLTATT--TRRSKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPAVATMTKTTTIGDGSSAAAHQRGEP-YVFYGVAPADKGLSEALLQELKRSLGG-EIDKAGEAGGDSGATAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQL 863
+ N +P +D VLHL + G VAN +V+VGS +R+++LA LL T S RGF T TG GVPVS+I MG PNMDF+VRE RAV GP+ I+R G+C ++ ++ G+V V+ +GS+ + +NPDA+ P A GE Y V PA LS+AL+ ++ LG + A A D V LNA+A SFYSSQGRLD F+DRNE LV+ L HPD T EMETF L
Sbjct: 5 NTNLMPTHSDSTVLHLGVKAGQVANRVVSVGSLSRAKLLAQLLDDAKFDTFESPRGFTTFTGKKKGVPVSVIATGMGVPNMDFVVRETRAVVQGPMSIIRFGTCGSVQEEVTPGSVVVSGKGSVMVTRNPDAFFPDAA-------------------GEDCYRVSRVMPASPALSKALVASMESKLGALRTEPAIGASSDRDRVGVFDGLNATACSFYSSQGRLDSDFDDRNEHLVEDLTKTHPDLHTVEMETFHL 241
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: A0A5D6YBV4_9STRA (PNP_UDP_1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBV4_9STRA) HSP 1 Score: 181 bits (459), Expect = 2.630e-47 Identity = 120/289 (41.52%), Postives = 167/289 (57.79%), Query Frame = 3
Query: 72 MSASNQCAPYLLH--ANAVPLTADRRVLHLELGEGDVANNIVTVGSEARSEILASLLTA--TTTRRSKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPAVATMTKTTTIGDGSSAAAHQRGEPYVFYGVAPADKGLSEAL--LQELKRSLGGEID--------KAGEAGGDSGA---TAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQLLHLARLCR 887
+ A + C+ +L+ NA+P AD VLHL + G+VAN +V+VGS R+ +LA +L T S RGF TG+ GV VSII MG PNMDF+VRE RA+ +GP+ I+R G+C G++ +P G+V V+S+GS+ I +NPDA+ D ++ A H R V PA LS ++ Q+ R+L D ++ EA + A V G LNA+A SFYSSQGR+D +F+DRNE +V+ LLA HP+ + EMETF LL LA+ R
Sbjct: 18 LRAPSTCSSVMLYENTNAMPKHADGTVLHLGVKHGEVANRVVSVGSLDRARVLAGMLDGGQVATHESSRGFTVFTGEMLGVSVSIIATGMGAPNMDFVVRETRAIVDGPMAIIRFGTCGGIQQGVPPGSVVVSSQGSVSIVRNPDAF------------FADAAADAEHYR-----VSRVMPASAPLSMSVRATQQQSRTLEARRDCKSLLSIMESREAEFQTLAGKKVGVYGGLNATACSFYSSQGRIDAAFDDRNERVVENLLAGHPELHSLEMETFHLLDLAQRSR 289
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: A0A7S3BCG4_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BCG4_9VIRI) HSP 1 Score: 181 bits (459), Expect = 3.880e-47 Identity = 111/260 (42.69%), Postives = 147/260 (56.54%), Query Frame = 3
Query: 123 PLTADRRVLHLELGEGDVANNIVTVGSEARSEILASLLTATTTRR-----SKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPAVATMTKTTTIGDGSSAAAHQRGEPYVFYGVAPADKGLSEALLQELKRSLGGEIDKAGEAGGDSGATAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQLLHLARLCR 887
P D RV HL+ GDVAN I++VG R+E LAS+L R S RGFVTHTG + G PVS+I MG NMD +VRE RAV +G + IVR+G+C GL+P PVGT+ +AS+G+ +NPDA+A D S+ E + F PAD LS AL +++ +G T+VV +N +A SFYSSQGR D +F+DRN+DL L+ +P+A + EMETF LL + R R
Sbjct: 58 PTDPDGRVYHLQFRRGDVANRIISVGDVGRAEFLASMLEPALDGRVHKVVSSRGFVTHTGRYGGQPVSVIATLMGVSNMDMVVREARAVVDGEMVIVRVGTCGGLQPAAPVGTIVIASKGAASCYRNPDAFAD------------DADSSE-----ELFRFSKPIPADDALSTALAANMRKHVGET-------------TSVVEGMNVTACSFYSSQGRSDAAFDDRNDDLTDVLVEHYPEAMSLEMETFHLLDMCRASR 287
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Match: A0A7R9Y8J0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y8J0_9VIRI) HSP 1 Score: 179 bits (455), Expect = 7.800e-47 Identity = 116/263 (44.11%), Postives = 147/263 (55.89%), Query Frame = 3
Query: 108 HANA-VPLTADRRVLHLELGEGDVANNIVTVGSEARSEILASLLTATTTR-----RSKRGFVTHTGDFNGVPVSIILINMGYPNMDFLVREVRAVTNGPLHIVRLGSCAGLRPDLPVGTVAVASEGSIFIGQNPDAWAPAVATMTKTTTIGDGSSAAAHQRGEPYVFYGVAPADKGLSEALLQELKRSLGGEIDKAGEAGGDSGATAVVGCLNASADSFYSSQGRLDPSFEDRNEDLVKTLLARHPDAGTFEMETFQLLHLAR 878
+ANA P D RV HL GDVAN I++VG R+E L+++L S RGFVT+TG +N PVSII MG NMD +VRE RAV +G + +VRLG+C GL+PD PVGTV VAS+G+ +NPDA+ P G G Y F PAD +S L++ L+ SL T VV L+ +A SFYSSQGR+D +F D NEDL + L+ R+PDA + EMETF LL L R
Sbjct: 31 YANANFPKDPDGRVYHLGFRRGDVANRIISVGDVGRAEFLSTMLEPAADGIVHKVMSSRGFVTYTGRYNDEPVSIIATLMGVANMDMVVREARAVIDGDMAVVRLGTCGGLQPDAPVGTVVVASKGAASCYRNPDAFGP-------DADAGVGK----------YHFSKPVPADGEMSALLVENLRASL-------------DDTTPVVEGLDVTACSFYSSQGRVDAAFIDHNEDLTERLVERYPDAMSLEMETFHLLDLCR 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.61.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig7.61.3 >prot_P-littoralis_Contig7.61.3 ID=prot_P-littoralis_Contig7.61.3|Name=mRNA_P-littoralis_Contig7.61.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=407bp MSASNQCAPYLLHANAVPLTADRRVLHLELGEGDVANNIVTVGSEARSEIback to top mRNA from alignment at P-littoralis_Contig7:279660..287987+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig7.61.3 ID=mRNA_P-littoralis_Contig7.61.3|Name=mRNA_P-littoralis_Contig7.61.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=8328bp|location=Sequence derived from alignment at P-littoralis_Contig7:279660..287987+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig7:279660..287987+ >mRNA_P-littoralis_Contig7.61.3 ID=mRNA_P-littoralis_Contig7.61.3|Name=mRNA_P-littoralis_Contig7.61.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1221bp|location=Sequence derived from alignment at P-littoralis_Contig7:279660..287987+ (Pylaiella littoralis U1_48)back to top |