mRNA_P-littoralis_Contig7.46.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig7.46.1 vs. uniprot
Match: D7FHZ2_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ2_ECTSI) HSP 1 Score: 706 bits (1823), Expect = 1.090e-242 Identity = 478/828 (57.73%), Postives = 555/828 (67.03%), Query Frame = 1
Query: 1 NQSVRSQAGQTRELIVKQAERVAHHTLVADLSEIEEKLSDDEHEYEAKAAKRXXXXXXXXXXIKQTAVKKVVSEASGQLSGTTLLDRMQGLAKLHASAKSAMNFELGRLTETRASAGKVTSADGGPSTSVHRHKVLKDEDLVPDDTVDNGEQDQVHEVLSEEGLDLSYLWMVNVNN-LGPPSRPTSNTERSSNSATKGRGTIATTDGEQHQDSEDEGSGGVGGEVGAQKAQRSGSSDARENGGGGGKITRNKAGAGDEDLAAAKSAGDEPLVGSLEFGTGVEQGPTGGASDVLVGAKAKERADRKE-------GGDXXXXXXKGEQQRAKPRKGRLVPGSLVLTSLSATELPNTEKGLFSKQDPYLVVKWGEQEVRTSAKRDSGKDCSWPKEEFALIVRMKKQLQEPLEIEVWNDNAGDKKPSPDVLIGKAPLPVEHLALASPAA---------------------------LSGTTGXXXXXXXXXXXXXXXXXXXXXKRVVLTVALVPSNGRTRKGKNAPGGVVTLTLAYTPPRRKPPKATKGQEEAMAKRKTDQGDQTATDTDEETLSSIAGLSALSAQGKMNHLSVQELGAAMSKALEGFDVRDELDKIGCLRYAQSIINGGFGQRGAFAHIQEEHLIGCPMFVPHRARKRLLALAELIRLQMTAEKKGVTTAIEARRTNGT--LEGTFNRGYTVDGVTMFNTLAAMAASLEEDRVKAELAIASEATAIEEDLPPRPKSPKPRSAAKEKVDVWLDRADRFKNGAIPREAVKTVIRDALLLNGLPSPRESDVRLSLQHTSTDSQGLHFDRRKLGVELKHLIRNSL 2373
N SV S AGQTREL+VKQAERVA HTLVAD+S++EE++SDDE EYEAKAA+R XXXXXXX + A++ VVS AS +LSG L DRMQGLAKLH SAKSAM FELG+L AGK T A+GG STSVHRHK LKD+DLVPDD+VDNGEQ++V +VL EGLDLSYLW+V+ L ++ TS+TE SS++A G T + + EQ + +D SG G G + Q SG+ A++ G G ++ +KA + A + G E LVGSLE G G G S V KA++RA E G + EQ + K RKGRLVPGSLVLTS+SA +LP+TEKG+FSKQDPYLV +WGEQEVRTSAKRDSGK CSW KEE AL+VR KKQLQEP+EIEVWNDNAGDKKPSPDVLIGK LPV+HLA A PAA XXXXXXXXXXXXXXXXXXXXX A+R +GD+TAT+TD++ LSSIAGLSA S QGK NHLSVQELGA MS+ LEGF++R+EL KI + Q IIN GFGQRGAFA+IQEEHL+G P++ P ARKRLLALAELIRLQM AEK+ VT A+E +G+ RGYT DGV F+TLAAM SLEEDR K EL +E T ++D PP+PK PKPRSAAKEKVDVWLD ADRFKNGAIPREAVKTVIRDALLLNGLPSPRESD ++SLQH STD QGL FDR KLGVEL+HLIR L
Sbjct: 2 NFSVSSGAGQTRELVVKQAERVARHTLVADISKLEERISDDEREYEAKAAERQKEXXXXXXXXXEAAIQNVVSGASSKLSGN-LFDRMQGLAKLHESAKSAMKFELGQLANVGKGAGKATPANGGSSTSVHRHKTLKDDDLVPDDSVDNGEQEEVEDVLGGEGLDLSYLWVVDAGKVLSRSNKSTSDTEGSSHTAKGGTTTDSEQEAEQRRPGDDRVSGN-GDAEGVENEQGSGAHAAKKEGDG--RLPLDKASG--KKSRDATNGGGENLVGSLELGDG--GGENAQPSIAQVDTKAEKRARNTEKRGEAGGGRAGDNGDARPEQPQVKKRKGRLVPGSLVLTSVSAADLPDTEKGVFSKQDPYLVARWGEQEVRTSAKRDSGKACSWVKEEVALLVRTKKQLQEPIEIEVWNDNAGDKKPSPDVLIGKGSLPVKHLASADPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQARR---EGDRTATETDDDALSSIAGLSAWSIQGKRNHLSVQELGAVMSQTLEGFNIREELGKI---EFVQGIINEGFGQRGAFAYIQEEHLVGHPIYAPRGARKRLLALAELIRLQMRAEKEKVT-AVEDIAEDGSPFWSPALERGYTTDGVAFFDTLAAMNYSLEEDRAKLELTKTNEFTTQQQDAPPQPKPPKPRSAAKEKVDVWLDHADRFKNGAIPREAVKTVIRDALLLNGLPSPRESDAKISLQHASTDDQGLRFDRSKLGVELEHLIRREL 814 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.46.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig7.46.1 >prot_P-littoralis_Contig7.46.1 ID=prot_P-littoralis_Contig7.46.1|Name=mRNA_P-littoralis_Contig7.46.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=798bp NQSVRSQAGQTRELIVKQAERVAHHTLVADLSEIEEKLSDDEHEYEAKAAback to top mRNA from alignment at P-littoralis_Contig7:190526..199214- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig7.46.1 ID=mRNA_P-littoralis_Contig7.46.1|Name=mRNA_P-littoralis_Contig7.46.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8689bp|location=Sequence derived from alignment at P-littoralis_Contig7:190526..199214- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig7:190526..199214- >mRNA_P-littoralis_Contig7.46.1 ID=mRNA_P-littoralis_Contig7.46.1|Name=mRNA_P-littoralis_Contig7.46.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2394bp|location=Sequence derived from alignment at P-littoralis_Contig7:190526..199214- (Pylaiella littoralis U1_48)back to top |