mRNA_P-littoralis_Contig7.280.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig7.280.2
Unique NamemRNA_P-littoralis_Contig7.280.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: D7FV54_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV54_ECTSI)

HSP 1 Score: 677 bits (1747), Expect = 6.640e-240
Identity = 363/389 (93.32%), Postives = 375/389 (96.40%), Query Frame = 2
Query:  236 MPTKGGRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAGGLGGGASDSELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSLKRKRRDEQAENVARKKQEAEELAAAKAARRLERAHRAAAEGDADESESNESDAESVEEET 1402
            MPTKGGRRRKTRTHVV PPSGAVGAPE+E+TEK+PKSFVLKKGKVHSNVSDLAEEMRR MEPHTARKLRERAKNTVKDYVSVSS+LGVTHLLVFTQTDKSLSLR+CRTPTGPTLTFKVQQFSL RHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVA VKLQDCRRVVMFNLDK NGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLH LEDISEYVAGG+GGG SDSE+EDEESKITLPDDYVGRGN KSQKSSIRLQELGPRLTLELMKVERG+CEGEVLYHSYVTKTA+EIKAQR KVEKRD+LKRKRRDEQAENVARKKQEAEELAAAKAARRLERA +AAAEGDADE E +ESD ES EEET
Sbjct:    1 MPTKGGRRRKTRTHVVGPPSGAVGAPESEMTEKVPKSFVLKKGKVHSNVSDLAEEMRRVMEPHTARKLRERAKNTVKDYVSVSSVLGVTHLLVFTQTDKSLSLRVCRTPTGPTLTFKVQQFSLMRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTNGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHGLEDISEYVAGGMGGGISDSEVEDEESKITLPDDYVGRGNVKSQKSSIRLQELGPRLTLELMKVERGLCEGEVLYHSYVTKTAEEIKAQRAKVEKRDNLKRKRRDEQAENVARKKQEAEELAAAKAARRLERAQQAAAEGDADE-EGSESDGESGEEET 388          
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: A0A6H5KLG7_9PHAE (Brix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG7_9PHAE)

HSP 1 Score: 597 bits (1539), Expect = 6.660e-208
Identity = 345/469 (73.56%), Postives = 362/469 (77.19%), Query Frame = 2
Query:  236 MPTKGGRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKV-----------------------------------------------VQAKVPDLHALEDISEYVAGGLGGGASDSELEDEESKITLPDDYVGRGNAKSQK---SSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSLKRKRRDEQAENVARKKQEAEELAAAKAARRLERAHRAAAEGDADESESNESDAESVEEETGVKGESRVA-GTGVGRTDGSEVSLDEMQES 1489
            MPTKGGRRRKTRTHVV  PSGAVGAPE+E+TEK+PKSFVLKKGKVHSNVSDLAEEMRR MEPHTARKLRERAKNTVKDYVSVSS+LGVTHLLVFTQTDKSLSLR+CRTPTGPTLTFKV+QFSL RHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVA VKLQDCRRVVMFNLDK NGTVEMRHFAVRATPTGI KAI KV                                               VQAKVPDLH LEDISEYVAGG+GGG SDSE+EDEESKITLPDDYVGRGN KSQK   +SIRLQELGPRLTLELMKVERG+CEGEVLYHSYVTKTA+EIKAQR KVEKRD+LKRKRR+EQAE        AEELAAAK    LERA +A  EGDAD                   GES+ A GT  G  +     LDEM+ES
Sbjct:    1 MPTKGGRRRKTRTHVVGFPSGAVGAPESEMTEKVPKSFVLKKGKVHSNVSDLAEEMRRVMEPHTARKLRERAKNTVKDYVSVSSVLGVTHLLVFTQTDKSLSLRVCRTPTGPTLTFKVRQFSLMRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTNGTVEMRHFAVRATPTGIAKAITKVARSCACVYDGLVRVSSMDTRDSRREPGNVRLPRANKCCGFGVIFLQVVQAKVPDLHGLEDISEYVAGGMGGGISDSEVEDEESKITLPDDYVGRGNVKSQKRRDNSIRLQELGPRLTLELMKVERGLCEGEVLYHSYVTKTAEEIKAQRAKVEKRDNLKRKRREEQAEXXXXXXXXAEELAAAKXXXXLERAQQAXXEGDAD----XXXXXXXXXXXXXXXGESQGAFGTSTGVDESGSDVLDEMEES 465          
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: A0A835ZHT7_9STRA (Brix domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHT7_9STRA)

HSP 1 Score: 446 bits (1146), Expect = 1.250e-149
Identity = 235/359 (65.46%), Postives = 286/359 (79.67%), Query Frame = 2
Query:  236 MPTKGGRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAGGLGGGASDSELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSLKRKRRDEQAENVARKKQEAEELAAAKAARR 1312
            MP KGG+R+KT THVV PP G  GA E    +K+P+SFV K GKV   V++L EEMR  MEP+TARKLRER+ N++KD+  VS   GVTHL+ F QT++SL+ RI R P GPTLTFKV Q+ L RHVRALQ+RPVE  QA+KT+PLVVLNNFGD  A  ++KLMKVTLQNMFP+INVA VKL DCRR+V+FN DKA  +VEMRH+A+RA PTGI KAIKKVVQAKVP+LH L+DI+EYV GG GG ASDSE++DEESK+ LPD Y GRGN K+Q+SSIRL ELGPR+++ L KVERG+  G+VLYHSY+TKTA+E+ A + K +++D+LKRKRR+EQ  NVARKK   EE  A KA +R
Sbjct:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEE----DKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGG-GGAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARKKAALEEKKALKAEKR 354          
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: A0A3R7HU96_9STRA (Brix domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HU96_9STRA)

HSP 1 Score: 348 bits (893), Expect = 1.390e-110
Identity = 191/346 (55.20%), Postives = 248/346 (71.68%), Query Frame = 2
Query:  236 MPTKGGRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAG-GLG-GGASDSELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSLKRKRRDEQAENVARK 1267
            MP KGG+RRKTRTHVV         P NE  +  P SFV K GKV S VS L ++MRR M P+TA KLRE+ KNT+KD+V V + +GVTH + FT T+   +L+I R P GPTL+FKV ++SL +H+  + KRPV+ + A K+ PLVVLNNF        +KLM VT QNMFP+I+V  V L +CRRVV+FN +K   TVE R + VRA P G+++++K +V+AKVP+L+ LEDISEYV G G G G ASDSE++DE + +TLPD + GRGN K++KS++RL E+GPRLTL L KVERGICEG+VLYH+Y TKT +E    + K E   +LKR+RR+EQ  NVA+K
Sbjct:    1 MPRKGGKRRKTRTHVVE-------VPGNEKDDT-PMSFVFKMGKVPSVVSTLVQDMRRVMAPYTADKLREKRKNTLKDFVHVGAPMGVTHFIFFTNTEAGTNLKIARIPRGPTLSFKVVKYSLMKHMHLVLKRPVDASLAMKSKPLVVLNNF--TAPDDHIKLMNVTFQNMFPAIDVQTVALSECRRVVLFNYEKETDTVEFRQYVVRAAPLGLSRSVKTIVKAKVPNLNKLEDISEYVLGNGAGIGSASDSEVDDEAAYVTLPDSFRGRGNRKAEKSAVRLTEIGPRLTLSLTKVERGICEGDVLYHAYKTKTPEEAAKAKAKHEAAVALKRQRREEQETNVAKK 336          
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: G4YI29_PHYSP (Brix domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=G4YI29_PHYSP)

HSP 1 Score: 341 bits (875), Expect = 6.610e-108
Identity = 191/352 (54.26%), Postives = 250/352 (71.02%), Query Frame = 2
Query:  236 MPTKGGRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAG-GLG-GGASDSELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSLKRKRRDEQAENVARKKQEAEE 1285
            MP KGG+RRKTRTHVV  P    G  +++     P SFV K GKV   VS L ++MRR M P+TA KLRE+ KNT+KD+V V + +GVTH + FT T+   +L+I R P GPTL+FKV ++SL + +  + KRPV+ + A K+ PLVVLNNF        +KLM VT QNMFP+I+V  V L +CRRVV+FN +K   TVE R + +RA P G++K++K +V+AKVP+L+ LEDISEYV G G G G ASDSE++DE S +TLPD + GRGN K++KS++RL E+GPRLTL L KVERGICEG+VLYH+Y TKT +E    + K E   +LKR+  +EQ  NVA KKQEA++
Sbjct:    1 MPRKGGKRRKTRTHVVEAP----GVEKDDS----PMSFVFKMGKVPGVVSTLVQDMRRVMAPYTADKLREKRKNTLKDFVHVGAPMGVTHFIFFTNTEAGTNLKIARIPRGPTLSFKVTKYSLMKQMHLVVKRPVDASAALKSKPLVVLNNF--TAPDDHIKLMNVTFQNMFPAIDVQTVALSECRRVVLFNYEKETDTVEFRQYVIRAAPLGLSKSVKTIVKAKVPNLNKLEDISEYVLGNGAGIGSASDSEVDDEASHVTLPDSFRGRGNRKAEKSAVRLTEIGPRLTLSLTKVERGICEGDVLYHAYKTKTPEESAKAKAKHEAALALKRQXXEEQEANVA-KKQEAKD 341          
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: W7U3H8_9STRA (Brix domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3H8_9STRA)

HSP 1 Score: 338 bits (868), Expect = 7.220e-108
Identity = 188/370 (50.81%), Postives = 248/370 (67.03%), Query Frame = 2
Query:  251 GRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAG------GLGGGASDSELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSLKRKRRDEQAENVARKKQEAEELAAAKAARRLERAHRAAAE 1342
            G+RRK RTHV   P       E E   +IPK+ VL+KG+       L  E+RR M P TA +L+ER  N +KD+ +V+  LG+TH+L  +QT  SLSL I R P GPTLTFKV+++ L  HVRA QKRP E   AY+T+PLVVLNNFGD  +   VKLMK+T QNMFP +NV  V+L DCRR+V+++ +   G VE RHFA+RA P+ + K++K++VQ K+P L  + DISE++ G      G  G ASDSE+EDE S + LPD + GRGN KSQKS+IRL ELGPRL L LMKV+RG  EG+V+YH Y+ KT +E++A   K +    LK++RR+EQ  NVARK+ + +E    K  R+  RA +  AE
Sbjct:    2 GKRRKRRTHVPVNPEQQQSLTEEE---RIPKTMVLRKGRTTPEAGALVTELRRLMGPETAARLKERRTNRMKDFAAVAGHLGLTHILSLSQTPASLSLHIARFPRGPTLTFKVERYCLQHHVRATQKRPYESLSAYQTAPLVVLNNFGDVSSPPYVKLMKITFQNMFPPLNVNTVRLTDCRRIVLYDYEADTGVVEQRHFAIRAAPSELHKSVKRLVQTKIPRLGKMTDISEFILGPALQAYGGAGAASDSEVEDEASHVILPDRFRGRGNLKSQKSAIRLAELGPRLRLRLMKVQRGFMEGDVIYHDYIKKTPEEVRALEAKAKAERELKKRRREEQEGNVARKELKLKEAQERKIERQAARAAKREAE 368          
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: K3WA45_GLOUD (Brix domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA45_GLOUD)

HSP 1 Score: 340 bits (873), Expect = 8.230e-108
Identity = 185/332 (55.72%), Postives = 240/332 (72.29%), Query Frame = 2
Query:  236 MPTKGGRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNF-GDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAG-GLGGGA-SDSELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSL 1222
            MP KGGRRRKTRTHVV  P       E + T   P SFV K GKV S VS L ++MRR M P+TA KLRE+ KNT+KD+V + + LGVTH + FT T+   +L+I R P GPTL+FKV  +SL RH+  + KRPV+ + A KT PLVVLNNF GD+     +KLM  T QNMFP+I+V  V+L +CRRVV+FN +K    VE R + VRATP GI+K++K +V+AK+P+L  LEDISEY+ G G G GA SDSE++DE + +TLPD + GRGN K++KS++RL E+GPRLTL+L KVER ICEG+VLYH+Y+TKT +E  A ++K +K  +L
Sbjct:    1 MPRKGGRRRKTRTHVVEAPGS-----EKDST---PMSFVFKMGKVPSVVSTLVQDMRRVMAPYTADKLREKRKNTIKDFVHIGAPLGVTHFIFFTNTEAGTNLKIARIPRGPTLSFKVVGYSLMRHLHLIHKRPVDASLAMKTKPLVVLNNFTGDED---HIKLMNATFQNMFPAIDVQTVQLSECRRVVLFNYEKETDHVEFRQYVVRATPLGISKSVKTIVKAKIPNLAKLEDISEYIMGNGAGAGATSDSEIDDESAHVTLPDSFRGRGNRKAEKSAVRLTEIGPRLTLKLTKVEREICEGDVLYHAYLTKTPEE--AAKLKAKKEQAL 319          
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: A0A8K1CBH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBH2_PYTOL)

HSP 1 Score: 341 bits (874), Expect = 8.760e-108
Identity = 181/334 (54.19%), Postives = 241/334 (72.16%), Query Frame = 2
Query:  236 MPTKGGRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAGGL-----GGGASDSELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSL 1222
            MP KGGRRRKTRTHV         APE++ T   P SFV K GKV S VS+L ++MRR M P+TA +LRE+ KNT+KD+VS+ + LGVTH + FT T+ S +++I R P GPTL+FKV  +SL R V  + KRPV+ + A+ +SPLVVLNNF   +    +KLM VT QNMFP+I+V  V+L +CRRVV+FN +K   TVE R + +RATP G++K++K +V+AK+P+L+ LEDISEYV G       GG  SDSE++DE + +TLPD + GRGN KS+KS++RL E+GPRLTL+L KVER ICEG+VLYH+YV+KT +E    + K E+  +L
Sbjct:    1 MPKKGGRRRKTRTHVAER-----AAPEDDNT---PMSFVFKMGKVPSVVSELVQDMRRVMAPYTADRLREKRKNTLKDFVSIGAPLGVTHFMFFTSTEASTNMKIARIPRGPTLSFKVVGYSLMRQVHLIHKRPVDASAAFHSSPLVVLNNFTGTE--DHIKLMNVTFQNMFPAIDVQTVQLSECRRVVLFNYEKETDTVEFRQYVIRATPLGLSKSVKTIVRAKIPNLNMLEDISEYVLGNSSRVDNGGVTSDSEVDDETTHVTLPDTFRGRGNQKSEKSAVRLAEVGPRLTLQLSKVEREICEGDVLYHAYVSKTPEEAARDKAKREEAQAL 324          
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: A0A6G0XQ99_9STRA (Brix domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ99_9STRA)

HSP 1 Score: 337 bits (864), Expect = 1.820e-106
Identity = 176/344 (51.16%), Postives = 247/344 (71.80%), Query Frame = 2
Query:  236 MPTKGGRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNF-GDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAGGLGGG-ASDSELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSLKRKRRDEQAENVA 1261
            MP KGG+R+KTRTHV         +  N   +K PKSFV K GK  S V  L ++MR+ M P TA +LRE+ KNT++D+V V++ LGV+H L F+ T    ++++ R P GPTL+FKV+ +SL +H+ ++QKRPV+ + A+KTSPLVVLNNF GD+      KL+ VT QNMFP+I+V  ++L +CRRVV+F+ DK  G VE R F +RA P G++K++K +V++KVP+L  +EDISE+V GG   G  SDSE++DE + + LPD + GRGN KS+KS++RL E+GPR+TL+L KVER +C+G+VLYH+YV KT +E    + K +  ++LKRKRR+EQ  NVA
Sbjct:    1 MPRKGGKRKKTRTHV--------SSAANNADDKTPKSFVFKMGKAPSCVISLVQDMRQVMLPFTADRLREKKKNTIQDFVHVAAPLGVSHFLAFSHTTAGTNMKLVRLPRGPTLSFKVESYSLMKHIHSVQKRPVDSSLAFKTSPLVVLNNFTGDED---HAKLLNVTFQNMFPAIDVQTIQLSECRRVVLFHYDKETGLVEFRQFVIRAMPLGLSKSVKTLVKSKVPNLGNMEDISEFVFGGANTGMTSDSEVDDESAHVVLPDKFRGRGNQKSEKSAVRLAEVGPRMTLKLTKVERDVCDGDVLYHAYVQKTPEEAAKLKAKKDMANALKRKRREEQEANVA 333          
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Match: A0A662XFB5_9STRA (Brix domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XFB5_9STRA)

HSP 1 Score: 337 bits (864), Expect = 2.560e-106
Identity = 181/338 (53.55%), Postives = 242/338 (71.60%), Query Frame = 2
Query:  260 RKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVSDLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKSLSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAGGLGG--GASDSELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICEGEVLYHSYVTKTADEIKAQRIKVEKRDSLKRKRRDEQAENVARK 1267
            RKTRTHVV  P    GA +++     P SFV K GKV S VS L  +MRR M P+TA KLRE+ KNT+KD+V V + LGVTH + FT T+   +L++ R P GPTL+FKV++F+L  H+  + KRPV+ + A+K  PLVVLNNF        +KLM VT QN+FP+I+V  V L +CRRVV+FN +K   TVE R + +RA P G+++++K +V+AKVPDL+ LEDISE+V G   G   ASDSE++DE + +TLPD + GRGN K++KS++RL E+GPRLTL L KVERGICEG+VLYHSY++KT +E    + K E+  +LKRKRR++Q  NVA+K
Sbjct:    4 RKTRTHVVEAP----GAEKDDT----PMSFVFKMGKVPSVVSSLVADMRRVMAPYTADKLREKRKNTLKDFVHVGAPLGVTHFIFFTSTEAGTNLKLARIPRGPTLSFKVERFTLMHHMHLVHKRPVDASLAFKAKPLVVLNNF--TAPDDHIKLMNVTFQNLFPAIDVQTVALAECRRVVLFNYEKDTDTVEFRQYVIRAAPLGLSRSVKTIVKAKVPDLNKLEDISEFVLGNGAGVASASDSEVDDEAAHVTLPDTFRGRGNRKAEKSAVRLSEIGPRLTLSLTKVERGICEGDVLYHSYLSKTPEEAAKAKAKHEEAKALKRKRREDQDANVAKK 331          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.280.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV54_ECTSI6.640e-24093.32Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KLG7_9PHAE6.660e-20873.56Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835ZHT7_9STRA1.250e-14965.46Brix domain-containing protein (Fragment) n=1 Tax=... [more]
A0A3R7HU96_9STRA1.390e-11055.20Brix domain-containing protein n=3 Tax=Phytophthor... [more]
G4YI29_PHYSP6.610e-10854.26Brix domain-containing protein n=6 Tax=Peronospora... [more]
W7U3H8_9STRA7.220e-10850.81Brix domain protein n=1 Tax=Nannochloropsis gadita... [more]
K3WA45_GLOUD8.230e-10855.72Brix domain-containing protein n=1 Tax=Globisporan... [more]
A0A8K1CBH2_PYTOL8.760e-10854.19Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XQ99_9STRA1.820e-10651.16Brix domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A662XFB5_9STRA2.560e-10653.55Brix domain-containing protein n=2 Tax=Nothophytop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:1112811..1115869 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FV54
Preferred namePPAN
PFAMs7tm_1,Brix
Model size1825
Max annot lvl2759|Eukaryota
KEGG rclassRC02020,RC02021
KEGG koko:K08387,ko:K14593,ko:K14859
KEGG ReactionR07320,R07321
KEGG Pathwayko00906,ko04080,map00906,map04080
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000027,GO:0000463,GO:0000470,GO:0000746,GO:0000747,GO:0001558,GO:0001560,GO:0002164,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007154,GO:0007275,GO:0007276,GO:0007292,GO:0007444,GO:0008150,GO:0008152,GO:0008361,GO:0009605,GO:0009791,GO:0009888,GO:0009987,GO:0009991,GO:0010467,GO:0010876,GO:0016043,GO:0016070,GO:0016072,GO:0019843,GO:0019915,GO:0019953,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030687,GO:0031668,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0035295,GO:0040008,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0046483,GO:0048513,GO:0048609,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051235,GO:0051704,GO:0051716,GO:0060429,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0090066,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904
Exons6
Evalue7.73e-243
EggNOG OGsKOG2963@1|root,KOG2963@2759|Eukaryota
EC5.3.99.8
Descriptionribosomal large subunit assembly
Cds size1296
COG categoryO
BRITEko00000,ko00001,ko01000,ko03009,ko04030
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.280.2prot_P-littoralis_Contig7.280.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig7 1113046..1115575 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791458.940944-UTR-P-littoralis_Contig7:1112810..11130451680791458.940944-UTR-P-littoralis_Contig7:1112810..1113045Pylaiella littoralis U1_48UTRP-littoralis_Contig7 1112811..1113045 +
1680791459.0253139-UTR-P-littoralis_Contig7:1115575..11158691680791459.0253139-UTR-P-littoralis_Contig7:1115575..1115869Pylaiella littoralis U1_48UTRP-littoralis_Contig7 1115576..1115869 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791458.9574687-CDS-P-littoralis_Contig7:1113045..11130691680791458.9574687-CDS-P-littoralis_Contig7:1113045..1113069Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1113046..1113069 +
1680791458.9685512-CDS-P-littoralis_Contig7:1113278..11136921680791458.9685512-CDS-P-littoralis_Contig7:1113278..1113692Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1113279..1113692 +
1680791458.9777422-CDS-P-littoralis_Contig7:1113947..11141691680791458.9777422-CDS-P-littoralis_Contig7:1113947..1114169Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1113948..1114169 +
1680791458.9912403-CDS-P-littoralis_Contig7:1114509..11146761680791458.9912403-CDS-P-littoralis_Contig7:1114509..1114676Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1114510..1114676 +
1680791459.001316-CDS-P-littoralis_Contig7:1114894..11150121680791459.001316-CDS-P-littoralis_Contig7:1114894..1115012Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1114895..1115012 +
1680791459.0103736-CDS-P-littoralis_Contig7:1115224..11155751680791459.0103736-CDS-P-littoralis_Contig7:1115224..1115575Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1115225..1115575 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig7.280.2

>prot_P-littoralis_Contig7.280.2 ID=prot_P-littoralis_Contig7.280.2|Name=mRNA_P-littoralis_Contig7.280.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=432bp
MPTKGGRRRKTRTHVVAPPSGAVGAPENELTEKIPKSFVLKKGKVHSNVS
DLAEEMRRAMEPHTARKLRERAKNTVKDYVSVSSILGVTHLLVFTQTDKS
LSLRICRTPTGPTLTFKVQQFSLTRHVRALQKRPVEVNQAYKTSPLVVLN
NFGDKQASSQVKLMKVTLQNMFPSINVAAVKLQDCRRVVMFNLDKANGTV
EMRHFAVRATPTGITKAIKKVVQAKVPDLHALEDISEYVAGGLGGGASDS
ELEDEESKITLPDDYVGRGNAKSQKSSIRLQELGPRLTLELMKVERGICE
GEVLYHSYVTKTADEIKAQRIKVEKRDSLKRKRRDEQAENVARKKQEAEE
LAAAKAARRLERAHRAAAEGDADESESNESDAESVEEETGVKGESRVAGT
GVGRTDGSEVSLDEMQESEDEEEGEEEEREE*
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mRNA from alignment at P-littoralis_Contig7:1112811..1115869+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig7.280.2 ID=mRNA_P-littoralis_Contig7.280.2|Name=mRNA_P-littoralis_Contig7.280.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3059bp|location=Sequence derived from alignment at P-littoralis_Contig7:1112811..1115869+ (Pylaiella littoralis U1_48)
TCTTGTCCCTGTGTGGGTTGTATGAAAATGTCGTGGACCCAAAGATGCAG GTGTGGACGTTTCAAAACTAAAGGGGGCGCCGGTGGGGTATTCCTACCCC CGGACATCTCGGACTTCCCGAACGTCCGCGCCGCCGTCCACATCCAGACA ACATTTGATTGTGGATTGGGATTGGCCGCAGGCAGTCACCTGGCATCTGT TGATTCCTGGCCTGATTCCTGCTACACACGTGATCATGCCAACAAAGGGA GGCCGACGGGTGAGAGTGATGCATTGGCTAGCTTTGTTTTATGCACGCAT GTAGCAGTGCGACAGCAACAAACACACACAAACACACACACATACACAAA CGATTTTCTACTGCCGTGTGAAGAGCATACAGCTTCTCGTCAAGCCAGAC ATCACTGACCCAGCGCGACACATCACTGACCCAGCGCACCCACCTCATCC CTCTCTTGTTTCTCGCAGAGGAAAACCCGCACACATGTCGTCGCACCACC ATCGGGAGCAGTTGGGGCTCCTGAAAATGAACTAACGGAGAAGATCCCGA AGAGCTTCGTGCTGAAGAAGGGAAAGGTCCATTCGAATGTCTCCGACCTT GCCGAGGAGATGCGGCGGGCCATGGAGCCCCACACAGCTCGCAAGCTACG AGAGCGGGCCAAGAACACCGTCAAGGACTACGTGTCGGTATCTAGCATCC TCGGCGTGACCCACCTCCTAGTCTTCACACAGACCGACAAGAGCTTGAGC CTGCGTATTTGCCGAACACCAACCGGGCCGACCCTTACGTTCAAGGTTCA GCAGTTCTCGCTCACGAGGCACGTGCGGGCGCTCCAGAAACGGCCAGTGG AGGTCAATCAGGCGTACAAGACATCTCCCTTGGTAGGTGGTGGTCAAAGA AGCAATGCTCGTACTGCTGTACGCCATGCAGGAATGATTGATTTTTTGTT TGTTTTTTATATTGGCGGGGGGGTGTTCGGTTGGGTCGGTAGAAAAATCT CGACCTTGGAGGAATGGTATCATATCAACACCGGTACAAATGGCTGACAC CTGCTGCCCTCTTCATCTCCACTCGAACATACGAAGCGCATCTTAACAGC AAGTTAATGGGAGCTGCTGCTTTTTGCTGTTAAGCAGGTTGTGCTCAATA ACTTTGGAGACAAGCAGGCCTCGTCCCAAGTTAAGCTGATGAAGGTTACT CTACAGAACATGTTCCCGTCAATCAACGTGGCGGCGGTCAAGTTGCAAGA TTGCCGACGAGTGGTGATGTTCAACCTCGACAAGGCCAACGGTACTGTCG AGATGAGACACTTCGCTGTTCGCGCCACTCCAACAGGCATCACCAAGGCA ATCAAGAAGGTATTCAGCTAGAGGGTGTGTGCTATGCCGCAGAGAGCGTG GCGGTGGTACTCGAGCAGTGGTGATGACACTGATGGTTTGTTTCTCCGTC CTAAGGTAGCAGTTCTTCGCTCGACGGCATGGTCACTTGTAAAATTTGGT TTGTACGGGGTTCATGAGAAGATAGCAACACATTCTTGGTTTGGTTCTAC AGTATCGTACGGGTTTCCGAGGCATGAACTTCAGACGAAGCACACTCCCA AGGTGCCCAGAGAAGTATTTATTTCGATACTTCGGAAGGAAGGTATCCTC GCAATTATTCGTCGGTCTAACGCAGCCGGCATGGTTTGATTTTCTGCAGG TGGTCCAAGCGAAGGTGCCCGACTTGCACGCTCTGGAGGACATCAGTGAG TATGTCGCGGGAGGCTTAGGCGGAGGTGCATCGGATAGTGAACTTGAGGA CGAGGAATCGAAGATCACCCTGCCAGACGACTACGTCGGTCGAGGAAACG CCAAGTCGCAAAAGAGGCGAGACTCGGCGAAAACGAGTGCCATGAATAGC CGTTGACATGGCGGTTGATGGATGCTACTGCTGTTGTTTACGCCGCGTTT TGGTGAATATTTCGGGTTCTTGCCCGGCGAGCACAACTCTACGGAGGATG CGATGATTTGTTGGGTACCGCTGCCGTCCTAGTCGCTTGATCTCCTCCGT TACAACTGTGCAATTACGTTTGATTTGATCACAGCTCAATCCGCCTCCAA GAGCTCGGACCGCGGCTAACTCTTGAGCTCATGAAGGTGGAACGAGGTAT ATGCGAGGGAGAGGTACTCTACCACAGTTATGTCACCAAGACTGCGGATG AGGTGAGCTATCAAGGGTAGTGTTGTCGAGTTCCGGCAGGGCTCGCAGTA CGTCTCGTTCAAGAGTGGTACAGTCAGGAGAAAATATGTTTGTGATGTGT TTGTTGCAACCGCAAATATGTAAGTTCATGGTATCGCGTTCTCGTTGCTC GCGCCATACTCGTGTTTGTGGACCTAATCCACAAAAATACTGGAATTGCC TTCGGCCCACGCAGATCAAGGCGCAGCGGATTAAGGTGGAGAAACGAGAT AGTCTCAAACGCAAGCGCCGCGATGAGCAGGCAGAAAATGTGGCCAGAAA AAAGCAGGAAGCCGAAGAGTTGGCGGCAGCGAAGGCTGCTCGACGGCTTG AGAGGGCACATCGGGCGGCCGCTGAAGGAGACGCGGACGAGAGCGAGAGC AACGAAAGCGACGCGGAAAGCGTAGAAGAGGAGACTGGCGTAAAGGGAGA AAGCCGGGTGGCGGGTACAGGCGTAGGTCGTACAGACGGATCGGAGGTGT CGTTAGATGAAATGCAGGAAAGCGAGGACGAAGAAGAGGGGGAAGAGGAG GAGAGGGAGGAGTAAAAGCGAAGCGAGTTTTCTGTGTGGGGATGGTCAGT CAATAAGAGTTTTCATGAAATGCACTTTTCCAATACAGGTGCATTTGAGC AATGGGAGGTGACCATCGAAAGAACGCAACACTTTGGCACCAGTTCAGCA CAAATTGCTACGACCAAGGGCTTGAACTGATGAGGTAAATACCATCTACC CACTGCTCCTGAGTTCACCGCAGCCTGTGTCCTGTGTTCACAGCTATCTT GTCGGAGGCGCGTTATTATTGGGGTCCCTTTTTTGTGAAAAATGACTAGA GGCGTTTTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig7:1112811..1115869+

>mRNA_P-littoralis_Contig7.280.2 ID=mRNA_P-littoralis_Contig7.280.2|Name=mRNA_P-littoralis_Contig7.280.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1296bp|location=Sequence derived from alignment at P-littoralis_Contig7:1112811..1115869+ (Pylaiella littoralis U1_48)
ATGCCAACAAAGGGAGGCCGACGGAGGAAAACCCGCACACATGTCGTCGC
ACCACCATCGGGAGCAGTTGGGGCTCCTGAAAATGAACTAACGGAGAAGA
TCCCGAAGAGCTTCGTGCTGAAGAAGGGAAAGGTCCATTCGAATGTCTCC
GACCTTGCCGAGGAGATGCGGCGGGCCATGGAGCCCCACACAGCTCGCAA
GCTACGAGAGCGGGCCAAGAACACCGTCAAGGACTACGTGTCGGTATCTA
GCATCCTCGGCGTGACCCACCTCCTAGTCTTCACACAGACCGACAAGAGC
TTGAGCCTGCGTATTTGCCGAACACCAACCGGGCCGACCCTTACGTTCAA
GGTTCAGCAGTTCTCGCTCACGAGGCACGTGCGGGCGCTCCAGAAACGGC
CAGTGGAGGTCAATCAGGCGTACAAGACATCTCCCTTGGTTGTGCTCAAT
AACTTTGGAGACAAGCAGGCCTCGTCCCAAGTTAAGCTGATGAAGGTTAC
TCTACAGAACATGTTCCCGTCAATCAACGTGGCGGCGGTCAAGTTGCAAG
ATTGCCGACGAGTGGTGATGTTCAACCTCGACAAGGCCAACGGTACTGTC
GAGATGAGACACTTCGCTGTTCGCGCCACTCCAACAGGCATCACCAAGGC
AATCAAGAAGGTGGTCCAAGCGAAGGTGCCCGACTTGCACGCTCTGGAGG
ACATCAGTGAGTATGTCGCGGGAGGCTTAGGCGGAGGTGCATCGGATAGT
GAACTTGAGGACGAGGAATCGAAGATCACCCTGCCAGACGACTACGTCGG
TCGAGGAAACGCCAAGTCGCAAAAGAGCTCAATCCGCCTCCAAGAGCTCG
GACCGCGGCTAACTCTTGAGCTCATGAAGGTGGAACGAGGTATATGCGAG
GGAGAGGTACTCTACCACAGTTATGTCACCAAGACTGCGGATGAGATCAA
GGCGCAGCGGATTAAGGTGGAGAAACGAGATAGTCTCAAACGCAAGCGCC
GCGATGAGCAGGCAGAAAATGTGGCCAGAAAAAAGCAGGAAGCCGAAGAG
TTGGCGGCAGCGAAGGCTGCTCGACGGCTTGAGAGGGCACATCGGGCGGC
CGCTGAAGGAGACGCGGACGAGAGCGAGAGCAACGAAAGCGACGCGGAAA
GCGTAGAAGAGGAGACTGGCGTAAAGGGAGAAAGCCGGGTGGCGGGTACA
GGCGTAGGTCGTACAGACGGATCGGAGGTGTCGTTAGATGAAATGCAGGA
AAGCGAGGACGAAGAAGAGGGGGAAGAGGAGGAGAGGGAGGAGTAA
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