mRNA_P-littoralis_Contig7.28.1 (mRNA) Pylaiella littoralis U1_48

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: D7FHZ3_ECTSI (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ3_ECTSI)

HSP 1 Score: 2368 bits (6136), Expect = 0.000e+0
Identity = 1218/1287 (94.64%), Postives = 1240/1287 (96.35%), Query Frame = 1

Query:    1 MSYADEGDDIFGDAAPDGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEQEEVDGLYDGGVAXXXXXXXXXXXXXGLGDEEEYDPDAAYAAGGVMDD-DELDPLEEDISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDTVRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQE--EGVEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSKVNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNRSKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECRGCKGKSDVSQIHVPYACKLLFQELMAMCIAPRMFVRADAGAKQIQF 3852
            MSY DEGDD+FGDA P+GE           XXXXXXXXXXXXXXXXXXXX E+   +G   G      XXXXXXXXX        YDPDAAY AGG+MDD DELDPLEEDISQEDAWVVIS+YFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDTVRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQE  EG+EAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKF WTSEIRSFVDNSG+PPSSM+LQMYAKG ++SKVNGG IRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFR SLEEADVIQNQV AQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEE+GGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNV+VGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRG+GDMAVLSAESFERPARENT+GMKHGNYDKLE+DGLVAPGTRVSGTDVLIGKTTPL  GGG +GVTGGPG+RSK+DSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVR+PQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECRGCKGKSDVSQIHVPYACKLLFQELMAMCIAPRMFVRADAGA Q+Q+
Sbjct:    1 MSYEDEGDDVFGDAVPEGEAGVEEDDYGDGXXXXXXXXXXXXXXXXXXXXXERGYENGAAGGXXXEGLXXXXXXXXX--------YDPDAAYGAGGLMDDEDELDPLEEDISQEDAWVVISAYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDTVRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQEDGEGLEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGTQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEEDGLVAPGTRVSGTDVLIGKTTPL--GGGVAGVTGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECRGCKGKSDVSQIHVPYACKLLFQELMAMCIAPRMFVRADAGAVQVQY 1277          

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: A0A835YQ41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ41_9STRA)

HSP 1 Score: 1867 bits (4835), Expect = 0.000e+0
Identity = 903/1185 (76.20%), Postives = 1029/1185 (86.84%), Query Frame = 1

Query:  304 ELDPLEEDISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDTVRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQEEGVEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSKVNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDL--HDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNRSKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECRGCKGKSDVSQIHVPYACKLLFQELMAMCIAPRMFVRADAGAKQIQF 3852
            ELDP EE+I+QEDAW VISSYF+EKGLVRQQLDSFDEF+ +TM E+V+ +G+I++TPE QY+PG +  ++TFQI F QVYL+KP   EKDGS+T+MFPHEARLRNLTY++PLYCDI CK Y+AD      ++            EFLG+VPIMLR SFCVL +R+D+ELTELGECIYDQGGYF+ING +KVLIA ERMS NHVYCF+K+QPSKF W  E RS V+   +P S+MYLQMY KG K+S++ GGQIR  LPY+RTDVP+VL+FRALG+ NDK ILEHIVYDFSD +MMEKFR SLEEADVIQ++  A DFIGKRGSA NVGRNERI YAKGLLQ+E LPHVG    +E KK FFLGY+VHKLLMCSLGRLEEDDRDHYGKKRLDLAG L+AGLFR              Q CLD+G  FV+G AIKS  IT+GL+YSLATGNWGD+KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVGC+LSPILEFLEEWA ENL+EI+P  IA+  CTK+FVNGNW+G+HR+PN+LV+TLV QRR LDID EVSVVRDIK RELRLYTDAGR+CRPLFVV+NN+L IRK HI+DL  +   Y WT+LMQ GVVEY+DTEEEETTM+AM+P DL   GGYS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+YASNYQ+RMDTLAHVLHYP KPLV TR+MEHLHFRELPSG NVVV IM Y+GYNQEDSLIMNQSA+DRGLFRSS+FR++ D+EKAG G+G+MA+LSAE FERP ++  SG + G+YDKL+ DGLV+PGTRVSG+D++IGKTTPLA GG A G+T G    SKRDSST M++HE G +D+VMLTTNQEGFKFCKVRIRNVR+PQIGDKFASRHGQKGTIGMTYRQEDMP+S++GI PD+I+NPHAIPSRMTIA LIE L+GK G+L GTEGDATPFTDVTVA++SS LH++G+QKHGNE MYSGHTGRML +KVFLGPTFYQRLKHLVDDKIHSRSRGPV  LTRQPMEGR RDGGLRMGEMERDCLISHGCANFLRDRLF+NSDAYRVHVC++CGLIA+ANLRK SFECRGC+ K+D+SQ+H+PYACKLLFQELMAMCIAPRMFV   +G K++ F
Sbjct:    8 ELDPHEEEITQEDAWQVISSYFAEKGLVRQQLDSFDEFINNTMQEIVTESGDIRVTPEPQYLPGMEVTKKTFQIKFNQVYLSKPIVIEKDGSVTNMFPHEARLRNLTYSAPLYCDIDCKIYDADNPAAPIDDKASILLAAYWKYEFLGYVPIMLRCSFCVLADRSDRELTELGECIYDQGGYFIINGRQKVLIAQERMSNNHVYCFRKKQPSKFHWVCETRSHVEGGTRPTSTMYLQMYVKGPKHSQIAGGQIRTTLPYVRTDVPIVLIFRALGFVNDKTILEHIVYDFSDAEMMEKFRPSLEEADVIQSRTLALDFIGKRGSAANVGRNERIQYAKGLLQKEVLPHVGTDEASETKKGFFLGYVVHKLLMCSLGRLEEDDRDHYGKKRLDLAGPLVAGLFRTXXXXXXXXXXXXXQKCLDEGRGFVLGVAIKSNTITNGLRYSLATGNWGDQKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGCALSPILEFLEEWATENLEEISPSTIAEKQCTKIFVNGNWIGIHREPNQLVRTLVIQRRCLDIDAEVSVVRDIKERELRLYTDAGRICRPLFVVQNNKLVIRKSHIHDLVSNPEEYNWTSLMQAGVVEYVDTEEEETTMIAMDPSDLAAGGGYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYASNYQVRMDTLAHVLHYPMKPLVCTRSMEHLHFRELPSGVNVVVAIMCYTGYNQEDSLIMNQSAIDRGLFRSSYFRSIVDKEKAGSGVGEMALLSAEQFERPNKDQCSGSRSGSYDKLDADGLVSPGTRVSGSDIIIGKTTPLAQGG-AGGLTAGVNRFSKRDSSTAMKAHESGTIDQVMLTTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPFSVEGITPDLIINPHAIPSRMTIAHLIETLMGKFGLLVGTEGDATPFTDVTVADISSRLHQMGYQKHGNETMYSGHTGRMLTSKVFLGPTFYQRLKHLVDDKIHSRSRGPVAMLTRQPMEGRARDGGLRMGEMERDCLISHGCANFLRDRLFLNSDAYRVHVCNRCGLIAIANLRKQSFECRGCRNKTDISQVHIPYACKLLFQELMAMCIAPRMFVDESSGVKRVHF 1191          

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: A0A024TRP0_9STRA (DNA-directed RNA polymerase subunit beta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRP0_9STRA)

HSP 1 Score: 1643 bits (4254), Expect = 0.000e+0
Identity = 806/1183 (68.13%), Postives = 961/1183 (81.23%), Query Frame = 1

Query:  328 ISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDTVRRT---FQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQEEGVEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSKVNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHD---PNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQE--KAGRGIGD-MAVLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNRSKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECRGCKGKSDVSQIHVPYACKLLFQELMAMCIAPRMFVRADAGAKQIQ 3849
            +SQEDAW VIS+YF EKGLVRQQLDSFDEF+Q+TM EL+  + +I+ITPE QY PGQ + R T   +QI FGQ+YL+K T  E DGS + MFPHEARLRNLTY++PLY D++C+ ++A      ++E  E   E    KEF+G +PIMLRS +CVL +++DKELTEL EC+YDQGGYFVINGSEKVLIA ERMS NHVYCFKK   SK+ W  E RS V+   +P S+MY+QMYAK G  S V+G QIRA +PYIR D+PVV++FRALG+  D+ ILEHI YDF+D ++ME+F+ SLEEA VIQ Q  A DFIG+RGSAVNV + +R+ YA+ +LQ+E LPHVG+    E KK +FLGY+VHKLLMCSLGRL EDDRDHYG KRLDLAG LL GLFR LF+KLT++V+ YLQ C+D G  F +  AIKS+ I++GL+YSLATGNWG +KTA+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQAKPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG   +PILEFLEEW+ ENL+EI   +I     TK+FVNGNWVGVHR+PN LV+TL   RR +DID EVSV+RD+  +ELR+YTDAGRVCRPLF+VENNRL ++K+H+  L +    ++ W NL+ +GVVE IDTEEEE  M+AMEPKDL  A    S YTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIY+SN++ RMDT+A++L+YP+KPLVTTRAME+LHFRELPSG N +V I  Y+GYNQEDSLIMNQSA+DRGLFRS+F+R   DQE  K+  GIG     +++E FE+P R     +KHG+Y KL+ DGLVAPGTRVSG+D++IGKT+PL     +S   G      KRD+ST +R+HE+GI+D VMLTTN EGFKF KVR RN+RIPQIGDKFASRHGQKGTIGMTYRQEDMP++I+G+ PDIIVNPHAIPSRMTI  LIECLLGKV   TG EGDATPFTDVTV  +S TLH +G+Q+ GNEV+Y+GHTGR L  ++F+GPTFYQRLKH+VDDKIHSRSRGPV  LTRQP+EGR R+GGLRMGEMERDCLISHG ANFL DRLF NSDAYRVHVCD CG+IA+ANLRKM+FECR C+ K+ +SQ+H+PY+CKLLFQELMAM IAPR+F   +     ++
Sbjct:    9 VSQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELIDDSRDIRITPEAQYNPGQKSNRVTDTIYQIQFGQIYLSKCTMTESDGSTSVMFPHEARLRNLTYSAPLYVDVTCQKFQAGTVPIEEQEPYE---EETTAKEFIGSIPIMLRSKYCVLTDKSDKELTELNECVYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKSSISKYSWVCETRSHVERGARPTSTMYVQMYAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQIIP--TATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVENNRLLLQKQHVVKLQNHKHTHFRWQNLLTEGVVELIDTEEEEVCMIAMEPKDLRNA---RSLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNFRARMDTMANILNYPQKPLVTTRAMEYLHFRELPSGVNAIVAIATYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPHGIGGGSGFMNSEEFEKPTRATCMRLKHGSYHKLDADGLVAPGTRVSGSDIIIGKTSPLP----SSDENGLEARHQKRDASTTLRTHENGIIDSVMLTTNAEGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTIEGVTPDIIVNPHAIPSRMTIGHLIECLLGKVSSQTGDEGDATPFTDVTVQAISDTLHSLGYQRFGNEVLYNGHTGRRLQAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPLEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDLCGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMAMSIAPRLFTMGNPNISAVK 1179          

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: K3XBN8_GLOUD (DNA-directed RNA polymerase subunit beta n=28 Tax=Oomycota TaxID=4762 RepID=K3XBN8_GLOUD)

HSP 1 Score: 1642 bits (4252), Expect = 0.000e+0
Identity = 798/1181 (67.57%), Postives = 958/1181 (81.12%), Query Frame = 1

Query:  328 ISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDTVRRT--FQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQEEGVEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSKVNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHD---PNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQE--KAGRGIGDMAVLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNRSKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECRGCKGKSDVSQIHVPYACKLLFQELMAMCIAPRMFVRADAGAKQIQ 3849
            +SQEDAW VISSYF EKGLVRQQLDSFDEF+Q+TM ELV  +  I+I PE QY PGQ+       + I+FGQ+YL+KPT  E DGS + MFPHEARLRNLTY +PLY D+ C+ Y+A     +  + +   ++ E PKEF+G VPIMLRS +CVL ++TDKELTEL EC+YDQGGYF+INGSEKVLIA ERMS NHVYCF+K   SK+ W  E RS V++  +P S+MY+QMY + G  S + G QIRA +PYIR D+PVV++FRALG+  D+ ILEHI YDFSD ++ME+F+ SLEEA VIQ Q  A DFIG+RGSA+NV + +RI YA+ +LQ+E LPHVG+    E KK +FLGY+VHKLLMCSLGR+ EDDRDHYG KRLDLAG LL GLFR LF+KLT++V+ +LQ C+D G  F +  AI+S+ IT+GL+YSLATGNWG +KTA+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQA+PRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG   +PILEFLEEWA ENL+EI P +I  +  TK+FVNGNWVGVHR+PN L++TL   RR +DID EVSV+RD+  +ELR+YTDAGRVCRPLF+VE+N+L ++K  +  L +    NY W NL+  GVVE IDTEEEE  M+AMEPKD+   G  +  +THCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIY SN++ RMDT+A+VL+YP+KPLVTTRAME+LHFRELPSG N +VGI  Y+GYNQEDSLIMNQSA+DRGLFRS+F+R   DQE  K+  G G     + E FE+P+REN  G+++G+Y KL+ DGLVAPGTRVSG D++IGKT+PL      S  +       KRD+ST +RSHE+GI+D VMLTTN +GFKF KVR RN+RIPQIGDKFASRHGQKGTIGMTYRQEDMP++++GI PDIIVNPHAIPSRMT+  L+ECLLGKV   TG EGDATPFTDVTV  ++ TLH +G+QKHGNEV+YSGHTGR L  ++F+GPTFYQRLKH+VDDKIHSRSRGPV  LTRQPMEGR R+GGLRMGEMERDCLISHG ANFL DRLF NSDAYRVHVCD CG+IA+ANLRKM+FECR C+ K+ +SQ+H+PY+CKLLFQELM+M IAPR+F   +   ++++
Sbjct:   27 VSQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQELVDDSRSIRINPEAQYAPGQNKANTDTIYNISFGQIYLSKPTMTEADGSTSVMFPHEARLRNLTYAAPLYVDVVCEKYQAPASGPADLDQIAPYDQVETPKEFIGMVPIMLRSQYCVLTHKTDKELTELNECVYDQGGYFIINGSEKVLIAQERMSNNHVYCFRKTGASKYSWVCETRSHVEHGVRPTSTMYVQMYQRSGGKSAITGNQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFSDAELMERFKPSLEEAFVIQEQEVALDFIGRRGSAINVSKADRIRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGGLFRILFKKLTKDVKSFLQKCVDNGKDFNLTLAIRSRTITNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAQPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQIIPHS--TKIFVNGNWVGVHREPNELIRTLRSLRRCVDIDAEVSVIRDLMNKELRIYTDAGRVCRPLFIVEDNQLLLQKDQVVKLQNHKITNYRWHNLLTDGVVELIDTEEEEVCMIAMEPKDV---GAGTKVHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYCSNFRARMDTMANVLNYPQKPLVTTRAMEYLHFRELPSGINAIVGIASYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPMGAGGAGGSNCEEFEKPSRENCLGLRNGSYHKLDADGLVAPGTRVSGNDIIIGKTSPLP----TSEDSSLEQRHQKRDASTALRSHENGIIDSVMLTTNADGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTVEGITPDIIVNPHAIPSRMTVGHLVECLLGKVSSQTGDEGDATPFTDVTVQAIADTLHNLGYQKHGNEVLYSGHTGRRLTAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPMEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDICGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMSMSIAPRLFTLGNPNHQKLR 1198          

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: F0WJN8_9STRA (DNA-directed RNA polymerase subunit beta n=4 Tax=Oomycota TaxID=4762 RepID=F0WJN8_9STRA)

HSP 1 Score: 1639 bits (4243), Expect = 0.000e+0
Identity = 803/1175 (68.34%), Postives = 958/1175 (81.53%), Query Frame = 1

Query:  328 ISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQ-----DTVRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQEEGVEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSKVNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHD---PNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMA----VLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNRSKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECRGCKGKSDVSQIHVPYACKLLFQELMAMCIAPRMF 3816
            +SQEDAW VISSYF EKGLVRQQLDSFDEF+Q+TM ELV  +  I+I PE QY PGQ     DT+   + I FGQ+YL+KPT  E DGS + MFPHEARLRNLTY++PLY D+ C+ ++A+    ++ E +E  ++ E PKEF+G VPIMLRS +CVL ++TDKELTEL EC+YDQGGYF+INGSEKVLIA ERMS NHVYCF+K   SK+ W  E RS V++  +P S+MY+QMY + G  S ++G QIRA +PYIR D+PVV++FRALG+  D+ ILEHI YDF+D ++ME+F+ SLEEA VIQ Q  A DFIG+RGSA+NVG+ +RI YA+ +LQ+E LPHVG+    E KK +FLGY+VHKLLMCSLGR+ EDDRDHYG KRLDLAG LL  LFR LF+KLT++V+ YLQ C+D G  F +  AI+S+ IT+GL+YSLATGNWG +KTA+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQA+PRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG   +PILEFLEEWA ENL+EI P +I  +  TK+FVNGNWVGVHR+PN LV+TL   RR +DID EVSV+RD+  RELR+YTDAGRVCRPLF+VE N+L ++K+ +  L +    NY W NL+  GVVE IDTEEEE  M+AMEPKD+   G  +  YTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+Y SN++ RMDT+A+VL+YP+KPLVTTRAME LHFRELPSG N +VGI  Y+GYNQEDSLIMNQSA+DRGLFRS+F+R   DQE+     G  A    V + E FE+P+R+N  G++HG+Y KL+ DGLVAPGTRVSG D++IGKT+PL      S  +       KRD+ST +RSHE+GI+D VMLTTN +GFKF KVR RN+RIPQIGDKFASRHGQKGTIGMTYRQEDMP++++GI PDIIVNPHAIPSRMT+  LIECLLGKV   TG EGDATPFTDVTV  ++ TLH +G+Q+HGNEV+YSGHTGR L  ++F+GPTFYQRLKH+VDDKIHSRSRGPV  LTRQPMEGR R+GGLRMGEMERDCLISHG ANFL DRLF NSDAYRVHVCD CG+IA+ANLRKM+FECR C+ K+ +SQ+H+PY+CKLLFQELM+M IAPR+F
Sbjct:   55 VSQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQELVDDSRHIRINPEAQYTPGQAKAATDTI---YVIQFGQIYLSKPTMTEADGSTSVMFPHEARLRNLTYSAPLYVDVVCQKFQANATGPTKIEEMEPYDQVETPKEFIGMVPIMLRSQYCVLTHKTDKELTELNECVYDQGGYFLINGSEKVLIAQERMSNNHVYCFRKSGVSKYSWVCETRSHVEHGVRPTSTMYVQMYQRSGGKSAISGNQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAINVGKADRIRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGSLFRILFKKLTKDVKTYLQKCVDNGKDFNLTLAIRSRTITNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAQPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQIIPHS--TKIFVNGNWVGVHREPNELVRTLRSLRRCVDIDAEVSVIRDLMNRELRIYTDAGRVCRPLFIVEENQLLLQKEQVVKLQNHKITNYRWHNLLTDGVVELIDTEEEEVCMIAMEPKDV---GLGTQQYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYCSNFRARMDTMANVLNYPQKPLVTTRAMEFLHFRELPSGINAIVGIASYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPHGGSAATALVSNCEEFEKPSRDNCLGLRHGSYHKLDADGLVAPGTRVSGNDIIIGKTSPLP----VSEDSSLEQRHQKRDASTSLRSHENGIIDSVMLTTNADGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTLEGITPDIIVNPHAIPSRMTVGHLIECLLGKVSSQTGDEGDATPFTDVTVQAIADTLHNLGYQRHGNEVLYSGHTGRPLTAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPMEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDICGIIAIANLRKMTFECRNCRNKTQISQLHIPYSCKLLFQELMSMSIAPRLF 1217          

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: B8C598_THAPS (DNA-directed RNA polymerase subunit beta n=2 Tax=Bacillariophyta TaxID=2836 RepID=B8C598_THAPS)

HSP 1 Score: 1636 bits (4236), Expect = 0.000e+0
Identity = 800/1189 (67.28%), Postives = 964/1189 (81.08%), Query Frame = 1

Query:  328 ISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQD----------TVRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTY----EADVGDRSQEEG--VEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSKVNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLH-----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEAGG--YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNRSKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECRG--CKGKS-DVSQIHVPYACKLLFQELMAMCIAPRMF 3816
            ++QEDAW VIS+YF EKGLVRQQLDSFDEF+Q+TM ELV  +G I+++PE+Q++ G D          T ++ F++ FGQVYL+KPT  EKDG++T+MFPHEARLRNLTY +PLY D++   Y    + +VGD +++ G  V  EE R   KEFLG+VPIMLRS FCVL ++ D +L +LGECIYDQGGYFVINGSEKV++A ERMS NHVY FKK+QPSKF W  E RS V+NS +P S++Y+QMY KGGK + + G QIR+ LPYIRTD+PVV++FRALGY  D+ I+EH+VYD +D +MM+ FR SLEEA VIQ Q  A DFIG+RGSA +V +++RI YA G+LQ+E LPHVG     E KK FFLGY VHKLLMC LGR +EDDRDH+GKKRLDLAG LL GLFR LFRKLT++VRK+LQ CLD+G  F +G AIKS  I+DGLKYSLATGNWGDK   +KAGVSQVLNRLTYAS+LSHLRR NTPL R GKQAKPRQLHN+HWG +CPAETPEGQAVGLVKN+ALMAYI+ G S  P++EFLEE++ ENL +I P +IA+ N  K+FVNGNWVG+HRDP +LV T    RR +DID EVS+VRDI   E+R+YTDAGR+CRPLF+V +  L I+K HI+ L           WT+L+ +G+VEY+DTEEEETTM+AMEPKDL+   G  YS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSG NVVV IM+Y+GYNQEDSLIMNQSA+DRGLFRSS++R  NDQEK+   +G +  L++E FERPA +N  GMK G+Y KL+DDGLV+PGTRVSG DVLIGKT P+        +   P   +KRD ST M+++E+GIVD V+++T +EG++F KVRIRNVRIPQ+GDKFASRHGQKGTIGMTYRQEDMP++ +GIVPDIIVNPHAIPSRMTIAQLIEC+LGKV V  G EGDATPFTDV V ++S  LH +G+Q+HGNE MY GHTGR LN +VF+GPTFYQRLKHLVDDK+HSR+RGPV  LTRQP+EGR RDGGLRMGEMERDCLI+HGCANF+RDR F NSD YR+H+C++CGL A +NL+KM++ECR   C G    + Q+ +PYACKLLFQEL +MCI+PR++
Sbjct:    8 VTQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELVDDSGSIRVSPEIQHLVGYDEANFDETMNSTTKKVFEVKFGQVYLSKPTTVEKDGTVTNMFPHEARLRNLTYAAPLYVDVTMNEYRVGNDVNVGDPAEDMGEPVSTEEAR---KEFLGYVPIMLRSLFCVLSDKDDAQLADLGECIYDQGGYFVINGSEKVIVAQERMSNNHVYAFKKKQPSKFSWVIETRSQVENSTRPTSTLYIQMYQKGGKGA-IEGNQIRSTLPYIRTDIPVVIIFRALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEEAFVIQKQEVALDFIGRRGSARDVTKDDRIRYAAGILQKEVLPHVGTEEHCETKKGFFLGYAVHKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHFNIGAAIKSNHISDGLKYSLATGNWGDKGNTSKAGVSQVLNRLTYASSLSHLRRSNTPLARTGKQAKPRQLHNSHWGMVCPAETPEGQAVGLVKNMALMAYITTGTSQVPVMEFLEEFSTENLTDILPSVIAEPNTCKIFVNGNWVGIHRDPKQLVHTFRSLRRMIDIDAEVSIVRDIPESEVRIYTDAGRICRPLFIVTDQELAIKKHHISQLQGVSPDQKKLTWTDLLMEGLVEYVDTEEEETTMIAMEPKDLDMTVGEPYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNVVVAIMIYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYNDQEKSS-SVGSVGALNSEFFERPAFDNCKGMKTGDYGKLDDDGLVSPGTRVSGDDVLIGKTAPM------DAIANTPSRYTKRDCSTSMKANENGIVDNVLISTTKEGYRFTKVRIRNVRIPQVGDKFASRHGQKGTIGMTYRQEDMPFTCEGIVPDIIVNPHAIPSRMTIAQLIECILGKVAVFQGCEGDATPFTDVHVDDISKRLHAMGYQRHGNEAMYQGHTGRPLNARVFIGPTFYQRLKHLVDDKVHSRARGPVAMLTRQPLEGRARDGGLRMGEMERDCLITHGCANFIRDRFFCNSDQYRIHICERCGLTAQSNLKKMTYECRTPTCVGLPYKICQVEIPYACKLLFQELQSMCISPRIY 1185          

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: A0A1E7ERG7_9STRA (DNA-directed RNA polymerase subunit beta n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7ERG7_9STRA)

HSP 1 Score: 1622 bits (4201), Expect = 0.000e+0
Identity = 796/1192 (66.78%), Postives = 965/1192 (80.96%), Query Frame = 1

Query:  307 LDPLEEDISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDT----------VRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTY----EADVGDRSQEEGVEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSKVNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDK-KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLH----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNRSKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECR--GCKGK-SDVSQIHVPYACKLLFQELMAMCIAPRMF 3816
            +D  E  ++QED+W VIS+YF EKGLVRQQLDSFDEF+Q+TM ELV S+G+++++PELQ+M G +            +  F+I FGQVYL+KPT  EKDG++T+MFPHEARLRNLTY++PLY D++   Y    EA++ D +++ G EAE      KEFLG+VPIMLRS FCVL ++ D +L++LGECIYDQGGYFVINGSEKV+IA ER+S NHVY F+K+QPSKF W  E RS V+NS +P S++Y+QMY KGG+ + + G QIR+ LPYIRTDVPVV++FRALGY  D+ I+EH+VYD +D +MM+ FR SLEEA VIQ Q  A DFIG+RGSA +V +++RI YA  +LQ+E LPHVG+    E KK FF+GY VHKLL C LGR EEDDRDH+GKKRLDLAG LL GLFR LFRKLT +VR++LQ CLD+G  F +G AIKS  +TDGLKYSLATGNWGDK  +A KAGVSQVLNRLTYAS+LSHLRR NTPL R GKQAKPRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYI+ G +  P++EFLEE++ ENL +I P ++A+ N  K+FVNGNWVGVHRDP  LV T    RR +DID EVS+VRDI  +E+R+YTDAGR+CRPLFVV+  +L I+K+HI  L     +    WT+L+ +G+VEYIDTEEEETTMVAM+P DL     YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSG N +VGI+VY+GYNQEDSLIMNQSA+DRGLFRSS++R   DQEKA   +G +  L++E FE+P ++ T GMKHG Y KL++DGLVAPGTRVSG D+LIGKT P+         T  P   +KRD ST M+++E+GIVD V+++T +EG++F KVRIRNVR PQ+GDKFASRHGQKGTIGMTYRQEDMP++++GIVPDIIVNPHAIPSRMTIAQLIECLLGKV V  G EGDATPFTDVTV ++S+ LH +G+QK GNE ++ GHTGR +  +VF+GPTFYQRLKHLVDDK+HSR+RGPV  LTRQP+EGR RDGGLRMGEMERDCLI+HGCANF+RDR F NSD YR+H+C++CGL A ANL+KM++ECR   C  K + + QI +PYACKLL QE+M+MCI+ R++
Sbjct:    1 MDLEENPVTQEDSWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELVDSSGDLRVSPELQHMVGYNDEDDADAAFAETKPVFEIKFGQVYLSKPTTVEKDGTVTNMFPHEARLRNLTYSAPLYVDVTMNQYRVAREANITDPNEDMG-EAENTENAKKEFLGYVPIMLRSLFCVLSDKDDADLSDLGECIYDQGGYFVINGSEKVIIAQERLSNNHVYAFRKKQPSKFSWVIETRSQVENSSRPVSTLYIQMYQKGGRGA-IEGNQIRSTLPYIRTDVPVVVIFRALGYVADRDIIEHVVYDLTDGEMMDMFRPSLEEAFVIQRQEVALDFIGRRGSARDVTKDDRIRYASAILQKEVLPHVGVEEHCETKKGFFIGYAVHKLLSCKLGRAEEDDRDHFGKKRLDLAGPLLGGLFRLLFRKLTLDVRRHLQRCLDEGKHFNIGAAIKSNHVTDGLKYSLATGNWGDKGASAPKAGVSQVLNRLTYASSLSHLRRCNTPLARTGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQVPVMEFLEEFSTENLTDILPSVVAEPNTCKIFVNGNWVGVHRDPRALVDTFRSLRRMVDIDAEVSIVRDIAAKEVRIYTDAGRICRPLFVVQEQQLVIKKQHIMQLQGLSGEKKLTWTDLLMEGIVEYIDTEEEETTMVAMDPVDLNADESYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVGILVYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYIDQEKAS-SVGTLGTLNSEIFEKPTQDKTRGMKHGEYGKLDEDGLVAPGTRVSGDDILIGKTAPM------DSSTNMPSRYTKRDCSTSMKANENGIVDNVLISTTKEGYRFTKVRIRNVRTPQVGDKFASRHGQKGTIGMTYRQEDMPFTVEGIVPDIIVNPHAIPSRMTIAQLIECLLGKVVVFQGCEGDATPFTDVTVEDISTRLHAMGYQKFGNEHLFQGHTGRPMCARVFIGPTFYQRLKHLVDDKVHSRARGPVAMLTRQPLEGRSRDGGLRMGEMERDCLITHGCANFIRDRFFCNSDQYRIHICERCGLTAQANLKKMTYECRTPACHDKPTAICQIEIPYACKLLLQEMMSMCISTRIY 1183          

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: A0A7S1FRA3_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRA3_9STRA)

HSP 1 Score: 1620 bits (4194), Expect = 0.000e+0
Identity = 806/1235 (65.26%), Postives = 978/1235 (79.19%), Query Frame = 1

Query:  241 GDEEEYDPDAAYAAGGVMDDDELDPLEEDISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVS-SAGEIKITPELQYMPGQDT----------VRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTYEADVG----DRSQEEGVEAEEEREN-----------PKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSK------VNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENN--RLRIRKKHINDLHDPNYG---WTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEA---GGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNRSKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECR--GCKGKS-DVSQIHVPYACKLLFQELMAMCIAPRMF 3816
            GDEE  + +      G   D+ +D L+E ++QED+W VIS+YF+EKGLVRQQLDSF+EF+Q+TM ELV  S+G++++TPE+Q++ G D           VRR F++ FGQVYL+KPT+ E DG++T+MFPHEARLRN+TY++PLY D++   Y  D      D  Q+E  +  E +++           PKEFLG+VPIMLRS FCVL ++ D +L +LGECIYDQGGYF+INGSEKV++A ERMS NHVY F K+ PSKF W  E RS V+NS +P S++Y+QMY KGG+  +      + G QIR  LPYIRTDVP+V+VFRALGY  D+ I+EH+VYD +D +MM+ FR SLEE+ VIQ Q  A DFIG+RGSA +V +++RI YA G+LQ+E LPHVG  AG E+KK +FLGY VHKLLMC LGR  EDDRDH+GKKR+DLAG LL GLFR LFRKLT++VR++LQ CL++   F +G AIKS  ITDGLKYSLATGNWGDK ++ KAGVSQVLNRLTYAS LSHLRR+NTPL R GKQAKPRQLHN+HWG +CPAETPEGQAVGLVKNLALMAYI+ G +  P+LEFLEE++ ENL ++ P +IA+ + +K+FVNGNWVG+HRDP  LV+     RR +DID EVS+VRDI   E+R+YTDAGR+CRPLFVV++   R+ + K  I  L D       W +L+  G+VEYIDTEEEETTM+AMEPKDLEE+   GGYSSTYTHCEIHP+MILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSG N +VGIM+Y+GYNQEDSLI+NQSA+DRGLFRSS+FR  +DQEK   G G    L++E+FERP  +N  GMKHG Y KL++DGLV PG+RVSG D+LIGKT PL      + V   P   +KRD ST M+S ++GIVD VM++T +EG++F KVRIRN RIPQIGDKFASRHGQKGTIGMTYRQEDMP+S +GIVPDIIVNPHAIPSRMTIAQLIECLLGKV V  G EGDATPFTDVTV ++S  LH +G+QKHGNE MY GHTG+ L  +VFLGPTFYQRLKHLVDDK+HSR+RGPV  LTRQP+EGR RDGGLRMGEMERDCLI+HGCANF+RDR F+NSD YR+H+C++CGL+A +NL+KM++ECR  GC G    + Q+ +PYACKLLFQEL AMCI PR+F
Sbjct:   12 GDEEHEEVEEVIVCDG---DEVVDDLDEIVTQEDSWAVISAYFAEKGLVRQQLDSFNEFIQNTMQELVDDSSGDVRVTPEVQHIVGYDEAEVEETEHSGVRRLFEVQFGQVYLSKPTSVEVDGTVTNMFPHEARLRNMTYSAPLYVDVTMNEYRQDANAAPEDLEQDEDEDDPEGKKSHLGEKVHTERAPKEFLGYVPIMLRSLFCVLSDKDDAQLADLGECIYDQGGYFIINGSEKVIVAQERMSNNHVYAFNKKPPSKFSWVIETRSQVENSTRPTSTLYIQMYHKGGRAGRGVDGAGIEGNQIRTTLPYIRTDVPIVVVFRALGYVADRDIIEHVVYDLTDGEMMDIFRPSLEESYVIQRQDVALDFIGRRGSAKDVTKDDRIRYASGILQKEMLPHVGTEAGCESKKGYFLGYAVHKLLMCRLGRANEDDRDHFGKKRIDLAGPLLGGLFRVLFRKLTKDVRRHLQRCLEESRHFNLGAAIKSNHITDGLKYSLATGNWGDKGSSAKAGVSQVLNRLTYASTLSHLRRMNTPLARTGKQAKPRQLHNSHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQVPVLEFLEEFSTENLTDVLPSVIAEPSVSKIFVNGNWVGIHRDPKSLVKQCRSLRRMVDIDAEVSIVRDINESEVRIYTDAGRICRPLFVVDDREQRMVVTKSDIARLQDEGGNRATWNDLLMNGIVEYIDTEEEETTMIAMEPKDLEESRRGGGYSSTYTHCEIHPAMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVGIMIYTGYNQEDSLILNQSAIDRGLFRSSYFRCYSDQEK---GSGASNPLNSETFERPLHDNCRGMKHGEYGKLDEDGLVQPGSRVSGEDILIGKTAPLE----TNSVM--PSRYTKRDCSTPMKSTDNGIVDNVMISTTKEGYRFTKVRIRNTRIPQIGDKFASRHGQKGTIGMTYRQEDMPFSAEGIVPDIIVNPHAIPSRMTIAQLIECLLGKVVVFQGVEGDATPFTDVTVEDISKRLHAMGYQKHGNEAMYQGHTGKPLCARVFLGPTFYQRLKHLVDDKVHSRARGPVAMLTRQPLEGRSRDGGLRMGEMERDCLITHGCANFIRDRFFLNSDQYRIHICERCGLLAQSNLKKMTYECRTPGCVGLPYKICQVEIPYACKLLFQELQAMCITPRIF 1234          

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: A0A7S3PZE7_9STRA (DNA-directed RNA polymerase subunit beta n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3PZE7_9STRA)

HSP 1 Score: 1615 bits (4181), Expect = 0.000e+0
Identity = 808/1190 (67.90%), Postives = 960/1190 (80.67%), Query Frame = 1

Query:  328 ISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDT----------VRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTY----EADVGDRSQEEG--VEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSKVNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDK-KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVV-ENNRLRIRKKHINDLH-----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNR-SKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFECRG--CKGKSDV-SQIHVPYACKLLFQELMAMCIAPRMF 3816
            ++QEDAW VIS+YF EKGLVRQQLDSFDEF+Q+TM ELV  +  I+++PELQ++ G D            ++ F+I+FGQVYL+KPT  EKDG++T++FPHEARLRNLTY +PLY D++   Y    +A++ D  ++ G  V  EE R   KEFLG+VPIMLRS FCVL ++ D +L++LGECIYDQGGYFVINGSEKV+IA ERMS NHVY FKK+QPSKF W  E RS V+NS +P S++YLQMY KGGK + + G QIR+ LPYIRTD+PVV++FRALGY  D+ I+EH+VYD +D +MM+ FR SLEEA VIQ Q  A DFIG+RGSA +V +++RI YA G+LQ+E LPHVG     EA+K FFLGY VHKLLMC LGR +EDDRDH+GKKRLDLAG LL GLFR LF KLT++VRK+LQ CLD+G  F +G AIKS  ITDGLKYSLATGNWGDK  +A KAGVSQVLNRLTYASALSHLRR NTPL R GKQAKPRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYI+ G + +PILEFLEE++ ENL +I P +IA+ N  K+FVNGNWVG+HRDP  LV T    RR +DID EVS+VRDI   E+R+YTDAGR+CRPLFVV E+  + I+K HI  L           W++L+  G+VEY+DTEEEET M+AMEPKDL ++  YSSTYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSG N +V IMVY+GYNQEDSLI+NQSA+DRGLFRSS++R  NDQEKA   +G +  L+AE FE+P  ++  GMKHG Y KL+DDGLV PGTRVSG D+LIGKT PL         T G  +R +KRD ST M+++E+GIVD VM++T +EG++F KVRIRNVRIPQIGDKFASRHGQKGTIGM YRQEDMP++ +GIVPDIIVNPHAIPSRMTIAQLIECLLGKV V  G EGDATPFTDVTV ++S  LH +G+QKHGNE +Y GHTGR L  +VF+GPTFYQRLKHLVDDKIHSR+RGPV  LTRQP+EGR R GGLRMGEMERDCLI+HGCANF+RDR F NSD YR+H+C++CGL A ANL+KM++ECR   C G+++   QI +PYACKLLFQEL +MCI+ R+F
Sbjct:   44 VTQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELVDDSSNIRVSPELQHLVGYDEELMEEENGALTKKVFEIHFGQVYLSKPTTVEKDGTVTNIFPHEARLRNLTYAAPLYVDVTMNEYRVRRDANITDPLEDLGKPVSTEEAR---KEFLGYVPIMLRSLFCVLGDKDDAQLSDLGECIYDQGGYFVINGSEKVIIAQERMSNNHVYAFKKKQPSKFSWVIETRSQVENSTRPTSTLYLQMYQKGGKGA-IEGNQIRSTLPYIRTDIPVVIIFRALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEEAFVIQRQDVALDFIGRRGSAKDVTKDDRIRYASGILQKEVLPHVGTEENCEARKGFFLGYAVHKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFSKLTKDVRKHLQRCLDEGKHFNIGAAIKSNHITDGLKYSLATGNWGDKGASAPKAGVSQVLNRLTYASALSHLRRCNTPLARTGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQAPILEFLEEFSTENLTDILPSVIAEPNTCKIFVNGNWVGIHRDPKTLVDTFRSLRRVVDIDAEVSIVRDIPEAEVRIYTDAGRICRPLFVVTEDQEMAIKKHHILQLQGVLQDQKKLSWSDLLMDGLVEYVDTEEEETAMIAMEPKDLGDS--YSSTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVAIMVYTGYNQEDSLILNQSAIDRGLFRSSYYRCYNDQEKAS-SVGTIGSLTAEKFEKPLFDSCRGMKHGEYGKLDDDGLVQPGTRVSGDDILIGKTAPLD-------STAGMASRFTKRDCSTSMKANENGIVDNVMVSTTKEGYRFTKVRIRNVRIPQIGDKFASRHGQKGTIGMNYRQEDMPFTAEGIVPDIIVNPHAIPSRMTIAQLIECLLGKVVVFQGCEGDATPFTDVTVEDISKRLHAMGYQKHGNEAIYQGHTGRPLCARVFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRARGGGLRMGEMERDCLITHGCANFMRDRFFCNSDQYRIHICERCGLTAQANLKKMTYECRTPMCVGRANTFCQIEIPYACKLLFQELHSMCISTRIF 1219          

BLAST of mRNA_P-littoralis_Contig7.28.1 vs. uniprot
Match: F0YGN2_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGN2_AURAN)

HSP 1 Score: 1613 bits (4177), Expect = 0.000e+0
Identity = 806/1240 (65.00%), Postives = 958/1240 (77.26%), Query Frame = 1

Query:  325 DISQEDAWVVISSYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQ-DTVRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCK-------------------------------------TYEADVGDRSQEEGVEAEEER--------------------ENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFLWTSEIRSFVDNSGKPPSSMYLQMYAKGGKNSKVNGGQIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRSSLEEADVIQNQVTAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEN--------------NRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVVVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTSGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLAGGGGASGVTGGPGNRSKRDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRIPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVGVLTGTEGDATPFTDVTVANVSSTLHKIGFQKHGNEVMYSGHTGRMLNTKVFLGPTFYQRLKHLVDDKIHSRSRGPVMNLTRQPMEGRGRDGGLRMGEMERDCLISHGCANFLRDRLFINSDAYRVHVCDKCGLIAVANLRKMSFEC--RGCK-GKSDVSQIHVPYACKLLFQELMAMCIAPRMFV 3819
            +I+QEDAW VIS+YF+EKGLVRQQLDSFDEF+Q+TM ELV  +GE+ + PE QY PGQ      T+ + F QVY++KPTA EKDG+ ++MFPHEARLRN+TY SP+Y DISC                                      TYE      S ++ ++  EE                     ++PKEFLG+VPIMLRS FCVL +++DKEL ELGECIYDQGGYFVINGSEKV++A ERMS NHVYCF+K+QP K+ W  E RS V++  +P S++Y+QMY K G+     G QIR  LPY+R DVPV++VFRALG+  D+ ILEH+VYDFSDT+MME+ R SL+EA VIQNQ  A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG    ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V  YLQ C+D G  F + +AIKS+ +TDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALM+Y+SVG   SPILEFLEEW+MENL+EI+P  IA    TK+FVNG+WVGVHRDP+ L  TL   RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL +VE                 LR+RK H+  L + + GWT L+ +G+VE IDTEEEET M+AM P DL E   YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q RMDTL+HVLHYP+KPL TTRAMEHLHFRELPSG N +V IM Y+GYNQEDSLIMNQ+A+DRGLFRS+F+RT +D+E   +GI D      E+FERP R+  + M+HG+Y+K++ DGLV+PG RVSG+D+L+GKT+P       SG+       SKRDSST MR +E G+VD+VML+TNQ+G KF KVR R +RIPQIGDKFASRHGQKGTIGMTY QEDMPW+ DG+ PDIIVNPHAIPSRMTI  L+ECL  KVG LTG EGDATPFTDV+V  ++  LH++G+ +HGNEVMYSGHTGR+++ KVFLGPTFYQRLKHLVDDKIH+RSRGPV  LTRQPMEGR RDGGLRMGEMERDCLISHG ++FLRDR+F NSD Y +HVC  CGLIA A+LRK +F C  + C+   S + ++H+PYACKLLFQELMAMCIAPR+ V
Sbjct:    2 EITQEDAWTVISAYFAEKGLVRQQLDSFDEFIQNTMQELVDDSGELVVKPEAQYAPGQLAATPSTYFVLFNQVYVSKPTATEKDGTTSNMFPHEARLRNMTYASPMYVDISCVEQKQASPLRQGCAAELEIHGDWYPCVITKLSDGYATVTYEVVGPIHSGDDQIQVVEEHHVDVSARVRLINGGSSTHRIDSPKEFLGYVPIMLRSRFCVLADKSDKELCELGECIYDQGGYFVINGSEKVVVAQERMSNNHVYCFRKKQPHKYSWVVECRSHVEHGARPTSTIYMQMYNKAGRGQS-QGNQIRVTLPYVRVDVPVIVVFRALGFVADRDILEHVVYDFSDTEMMERLRPSLDEAFVIQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDDGRDFNLASAIKSRVVTDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRVYTDAGRVCRPLLIVEAASTVTRVRSQEATFQELRLRKSHVQKLVNGDLGWTQLLVKGLVELIDTEEEETAMIAMIPSDLNEP--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQRMDTLSHVLHYPQKPLATTRAMEHLHFRELPSGVNAIVAIMCYTGYNQEDSLIMNQAAIDRGLFRSTFYRTYSDKEH-NKGIWDSPEYLQETFERPNRDECTAMRHGSYEKIDSDGLVSPGVRVSGSDILVGKTSPSW----HSGLKAERSGPSKRDSSTTMRPNESGLVDQVMLSTNQDGMKFTKVRTRTIRIPQIGDKFASRHGQKGTIGMTYAQEDMPWTRDGVSPDIIVNPHAIPSRMTIGHLVECLQSKVGALTGKEGDATPFTDVSVDQIAGVLHELGYHRHGNEVMYSGHTGRIIHAKVFLGPTFYQRLKHLVDDKIHARSRGPVTMLTRQPMEGRARDGGLRMGEMERDCLISHGVSSFLRDRMFANSDPYSIHVCTLCGLIAHADLRKRAFWCNNKDCQHANSSIVRVHIPYACKLLFQELMAMCIAPRIQV 1233