mRNA_P-littoralis_Contig7.146.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig7.146.1
Unique NamemRNA_P-littoralis_Contig7.146.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE)

HSP 1 Score: 623 bits (1606), Expect = 1.300e-200
Identity = 590/1190 (49.58%), Postives = 685/1190 (57.56%), Query Frame = 1
Query:    7 LQQMSGGYADDARGPAPAS-SFKTLQRGIPSFKLTDDECARSKRFRHRVPSAGGRDDTGRSSEGGVAMSTLLFEDACTTPDQVAAGPQRVPSFSVASEVFRASHNSSWDSGAGCNIFGFGSASADGEGEDAVQRLDDVTLNDLNFLTTEGVAPSDRPAGTAQRDSSAAAGLDTKPIKSCAATIAGGYNQYITGGGDAGGGHSGNQLQATVPKEEKVVNEITGRTASARDTLSTTSSSRDILGPDITXRKISNSSILGTDVFDLEVGVPAFSASMEEYLNNQLDVAEESLDRSAEDECAFG-------HSASDGSCGCGAEEISSCMDFAEEAGSSPVSSSTRSVVVKSERDRYPGGPDEGSQDTASPPRVKAHGEDVKETTVGRRTRNVRGSQPQQXXXXXXXXXXXXXXXXXXXXXSEYEPP--TPREGKAKNVRXXXXXXXXXTAPRAAKSRGGVVGARMAGLPSAVVRRGT-LKRQTSEDVAARLPLQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSLARKLTQAKKRRRVIIKTASAGLDANVLNSIFTCRSGDIDEDLLLASTDVAKVVQNMKFSRVVNHK------DCKSGDNXXXXXXXXXXXXXXXXXXXXXXXXVQASAVKRPCT---TVPRKTPTSRAVFATPPCFPSKPPAAITSVSTPPPAFEPGGRTKSI------------------VATAKKSGTKSVVKTERVTMPAKRTRKVAASSGKGRKGATVVA-RSVPSAGLAVSSLRRHSAPAAASPGLRKSDSSGLGNIAGGTSKPL----------AAAVVQSGSSSTVFSFGSSQRSRAPMTGYSGVFGTGLHHQ-SLPVPSKGEKSTAITRGKGSSGGVLGRASAAAKPGAGK-SPSDVPPATRVPAWVGARGKRATG-YGEWRGGLSSSRSGLSQQRPSAVSSDSPTTTAPLDN-NMNVSLESSPGGPVQSSXXXXXXXXXXXXXXXXXXXXXPLHHHPYLLHHQFPHPHQQXPYFPHLNWVGGRYTGPPPPQ----QPYGFSVEFMSPVDARFAPPQRGP----YHGFSKVD------GGGQFNAEADAAATPTHR------GTGSAIGXXXXXXXXXXXXXXXXXXXXXA--------AAIFSEDAGPRRTGFMSYLLHQGPQ 3333
            + Q S G  +D+R  AP+S S   LQRGIPSFKL+DDE ARSKRFR+RVPS G RD  G +  GG   +T L      TP   A GP+ V SF++AS+VFR SHNSSW SG G N FGFG AS DGEGEDAVQRLDD TLNDLNF T EG+ P + P  TA R++    GLDTKP  + +++  GG ++Y   G  + GG   + +Q  V KEE VV  I   T SA + L   SS+RD+L       + SN   L  +VF LE G+P FSA+MEEYLN QL+ AE SLD  A DE A G         AS G  G   EE    +  A  AG+SP+ + TRSVVVKSE  R  G      Q T    R +  G  ++     RRTR  RG+Q Q XXXXXXXXXXXXXXXXXXXXX EYEPP  T REGK K  R         T            G R A   SA +RRG+ LKRQTSEDVAARLPL+VLECFYHVPLN+AA+QL+VSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLE+KIK R++ GKDAPSL RKLTQA+KRR+VIIKTASAGLD +VLNSIFTCR GDIDED+LL STDVAK V+ ++F +  +HK      D  +G  XXXXXXXXXXXXXXXXXXXXXXXX                 +KT   RAVFA  P F SKPPA   SV++PPPAFEPGGR                       + +  SG K  +K      PAKR +  A+ + KGRKG T  A RS+ SAG   S  ++    A A+                                 AA   + S+S VFS G     RAPM  YSGVFG GL H  S    S+G    A T+ + S GG  G+   +A   AG+ + S V  A R PAW+G  GKRA G YGEWRGG  S RS  SQQ  S   SDSPTTTA LD+ ++ +SLES P GP Q+S    XXXXXXXXXXXXXXXXX                   X      NW                Q YG       P+D  F+PPQ GP    +H FSKVD      G G   +  D A+ P          TGS       XXXXXXXXXXXXXXXXX         A+  S+D  PRRTGFMSYLLHQ PQ
Sbjct:    1 MAQPSSGL-EDSRSQAPSSASSSRLQRGIPSFKLSDDELARSKRFRNRVPSDGSRDGAGSNEGGGATPTTTLGG----TP---APGPRSVSSFTLASDVFRMSHNSSWGSGTGGNFFGFGPASVDGEGEDAVQRLDDATLNDLNFFTMEGIGPGNLPE-TAPRET-LGPGLDTKPTDTRSSSDGGGPDRYSIEGDGSHGGPRSDLVQLAVAKEEMVVPAIVDGTGSASNILRRASSARDVLRSGSMGGRDSNRDFLEGNVFGLEEGLPTFSAAMEEYLNRQLEAAEHSLDDPAGDERALGCMTDARDGGASVGGSGGTGEEXH--LGVAGRAGASPIRNPTRSVVVKSECSRSRGASAGVLQGTTYSQRTQEEGRGLEAKATERRTRYKRGAQ-QXXXXXXXXXXXXXXXXXXXXXXXEYEPPSCTLREGKVKKGRGRRRGAAATTXXXXXXXXXXXSGVRTASASSAFLRRGSSLKRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKARRDGGKDAPSLVRKLTQARKRRKVIIKTASAGLDVSVLNSIFTCRPGDIDEDMLLLSTDVAKAVEKIQFRQHADHKGSGAESDSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKKTSRIRAVFAGTPAFSSKPPAVAKSVASPPPAFEPGGRXXXXXXXXXXXXXXXKTAGNKPTSGSLGSGRKLCMKAGSPAEPAKRFKGDASMTAKGRKGVTAAAARSMSSAGRRASFPQKKCTAATAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTAACSPADSTSPVFSIGRPPHIRAPMISYSGVFGVGLRHTASSRASSRGGDPMAFTKVR-SVGGSSGQTPVSALVTAGECASSQVRQAARAPAWIGGGGKRAKGSYGEWRGGALSLRSSPSQQHLSDAGSDSPTTTATLDSFDLKLSLESPPRGPPQASRPRPXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXNWAAXXXXXXXXXXXXXXQLYG------CPIDICFSPPQHGPGSRGFHAFSKVDDSREATGTGAPRSTGDDASRPPDDKKIGGVSTGSTAAAAAVXXXXXXXXXXXXXXXXXXXXXXXXALASSTSQDTEPRRTGFMSYLLHQAPQ 1161          
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: D7FS12_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS12_ECTSI)

HSP 1 Score: 561 bits (1447), Expect = 1.110e-181
Identity = 417/771 (54.09%), Postives = 484/771 (62.78%), Query Frame = 1
Query:    7 LQQMSGGYADDARGPAPA-SSFKTLQRGIPSFKLTDDECARSKRFRHRVPSAGGRDDTGRSSEGGVAMSTLLFEDACTTPDQVAAGPQRVPSFSVASEVFRASHNSSWDSGAGCNIFGFGSASADGEGEDAVQRLDDVTLNDLNFLTTEGVAPSDRPAGTAQRDSSAAAGLDTKPIKSCAATIAGGYNQYITGGGDAGGGHSGNQLQATVPKEEKVVNEITGRTASARDTLSTTSSSRDILGPDITXRKISNSSILGTDVFDLEVGVPAFSASMEEYLNNQLDVAEESLDRSAEDECAFG--HSASDGSCGCGAEEISSC---MDFAEEAGSSPVSSSTRSVVVKSERDRYPGGPDEGSQDTASPPRVKAHGEDVKETTVGRRTRNVRGSQPQQXXXXXXXXXXXXXXXXXXXXXSEYEPPT--PREGKAKNVRXXXXXXXXXTAPRAAKSRGGVVGARMAGLPSAVVRRG-TLKRQTSEDVAARLPLQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSLARKLTQAKKRRRVIIKTASAGLDANVLNSIFTCRSGDIDEDLLLASTDVAKVVQNMKFSRVVNHKDCKSGDNXXXXXXXXXXXXXXXXXXXXXXXXVQASAVKRPCTTVPRKTPTSRAVFATPPCFPSKPPAAITSVSTPPPAFEPGG----------------RTKSIVATAKK--SGTKSVVKTERVTMPAKRTRKVAASSGKGRKGATVVA 2238
            + Q SGG   D+R  AP+ +S   LQRGIPSFKL+DDE ARSKRFR+RVPS G RD  G S EGG    T   E         A GP+ V SF++AS+VFR SHNSSW SG G N FGFG  S DGEGEDAVQR DD T NDLNF T EG+ PSD P  TA R++S   GLDTKP  + ++T  GG ++Y    G   GG   + LQ  V KEE VV  I   T SA + L   SS+RD+L       + SN   L  +VFDLE G+P FS +MEEYLN QL+ AE SLD  A DE AFG    A DG  G G          +  A   G+SP+   TRSVVVK E  R  G  D   Q T      +  G  ++     RRTR  RG+Q QQ XXXXXXXXXXXXX       SEYEPPT  PREGKAK  R         TA RAAK+  G  G R A + SA +RRG +LKRQTSEDVAARLPL+VLECFYHVPLN+AA+QL+VSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLE+KIK R++ GKDAPSL RKLTQA+KRR+VIIKTASAGLDA+VLNSIFTCR GDIDED+LL+STDVAK V+ ++F +  +HK     ++   XXXXXXXXXXXXXXXX      +A           +KT   RAVFA  P F SKPPA   SV++PPPAFEPG                 +T     T+    SG K  +K  R    AK+T+  A  + KGRKG T  A
Sbjct:    1 MAQPSGGL-QDSRSQAPSLASSSRLQRGIPSFKLSDDELARSKRFRNRVPSDGSRDGAG-SHEGGGPTPTTTLEGI------PAPGPRSVSSFTLASDVFRMSHNSSWGSGTGSNFFGFGLPSVDGEGEDAVQRFDDATFNDLNFFTMEGIGPSDLPE-TAPRETSGP-GLDTKPTDTRSSTDGGGPDRYSIERGGTHGGPRSDPLQPAVAKEEMVVPAIVDGTGSASNILRRASSARDVLRSASMSGRDSNRDFLEGNVFDLEGGLPTFSTAMEEYLNRQLEAAEHSLDDPAGDERAFGCMAGARDGGAGVGXXXXXXXXXXLGVAGRVGASPIEHPTRSVVVKQECRRSRGASDGVLQGTTHSQCTQEEGGGLETKAAERRTRCKRGTQ-QQKXXXXXXXXXXXXXEYADSSQSEYEPPTCTPREGKAKKGRGRRRGAAATTATRAAKTSSGSSGVRTASVSSAFLRRGGSLKRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKTRRDGGKDAPSLVRKLTQARKRRKVIIKTASAGLDASVLNSIFTCRPGDIDEDMLLSSTDVAKAVEKVQFRQDADHKG-SGAESDSAXXXXXXXXXXXXXXXXVESYGPRAKPPSXXXXXXXKKTTRIRAVFAATPAFCSKPPAVAKSVASPPPAFEPGXXXXXXXXXXXXXXXXXKTAGNKPTSGSLGSGGKLCMKAGRPAEAAKKTKGDAPMTAKGRKGVTAAA 759          
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.150e-36
Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 1402 KRQTSEDVAARLPLQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSLARKLTQAKKRRRVIIKTASAGLDANVLNSIFTCR 1752
            KRQTSE+VA RLP+ VLE FYHVPLN+AA++LSVSLTMLKKLCR YG+KRWPHRQVSSL+K+  KLEEKI +  +  K A +L  K    + +R +IIKTASAGLD +VLN++F  R
Sbjct:    2 KRQTSEEVAKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEKI-LGASDDKAAAALRAKAGPLRTKRELIIKTASAGLDPDVLNAVFAAR 117          
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.360e-20
Identity = 57/136 (41.91%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 1381 VVRRGTLKRQTSEDVAARLPLQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSLARKLTQAKKRRRVIIKTASAGLDANVLNSIFTCRSGDIDEDLLLAS 1788
            V   G   RQ S +V  R+ L VLE  Y  PL  AA++L VS TMLKKLCR YG++RWPHRQ+ S++K   K  +  + +  S  D  +   ++   +K+R +++KTAS GL+A++ ++IF  R G++D D L +S
Sbjct:   82 VDEHGVKIRQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQ-ARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARPGELDADQLFSS 216          
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.320e-15
Identity = 46/125 (36.80%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 1426 AARLPLQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSLARKLTQAKKRRRVIIKTASAGLDANVLNSIFTCRSGDIDEDLLLASTDVA 1800
            A  + L++L+ FY+VPL   AK+L +SLT+LKK+CR YG++RWPHRQ+ S++K+  +L E+I     S ++   L  +L   +K++R++ + AS+GL + + N++F      ++ED +  +   A
Sbjct:   11 ADNITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGA-TSHEERAELQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEDAVFDAPGAA 134          
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: A0A835YW93_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW93_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.210e-15
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 1405 RQTSEDVAARLPLQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEE 1605
            RQ+S +V+ R+ L VLE  Y++PL  AAK+L VS TMLKKLCR YG++RWPHRQ+ S+DK   K +E
Sbjct:    2 RQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQKHQE 68          
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI)

HSP 1 Score: 88.6 bits (218), Expect = 5.930e-15
Identity = 45/125 (36.00%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 1399 LKRQTSEDVAARLPLQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSLARKLTQAKKRRRVIIKTASAGLDANVLNSIFTCRSGDIDED 1773
            +++ T++     + L++L+ +Y+VPL   AK+L +SLT+LKK+CR +G++RWPHRQ+ S++K    L E+I    NS  +   L  ++   +K+RR++ K AS+GL   + N+IF      + E+
Sbjct:    2 IRQSTTQIEPEEITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINSV-NSPDEHAELRNQIGLLEKKRRLVTKGASSGLHTAMRNAIFLANPEHLQEE 125          
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.140e-14
Identity = 42/116 (36.21%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 1426 AARLPLQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSLARKLTQAKKRRRVIIKTASAGLDANVLNSIFTCRSGDIDED 1773
            A ++ L++L+ +Y+VPL   AK+L +SLT+LKK+CR +G++RWPHRQ+ SL+KT  +L+E+ +    + + A  +  +L   +K++R++ + AS+GL + + N++F      ++E+
Sbjct:    8 ADQITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHA-EIEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEE 122          
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: A0A835YN08_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN08_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.660e-14
Identity = 40/101 (39.60%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 1441 LQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSLARKLTQAKKRRRVIIKTASAGLDANVLNSIF 1743
            L++L+  ++ PL   A++  VSLTM+K+LCR  G++RWPHRQ+ SLDK   +LEE+I     S ++   L  ++   +K+RR++ + AS+GL + + N++F
Sbjct:    5 LELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISAT-TSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALF 104          
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Match: D7FN15_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN15_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-13
Identity = 43/122 (35.25%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 1369 LPSAVVRRGTLKRQTSEDVAARLPLQVLECFYHVPLNLAAKQLSVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSLARKLTQAKKRRRVIIKTASAGLDANVLN 1734
            LP   V +   KR+   D+A R+P++++  +++ PL ++A+ + +S+T LK+LCR +GVKRWPHRQ+S L++T   LE +    +   ++  ++  +L Q  +RR VII+ A    D +  N
Sbjct:   46 LPPRDVSKAGSKREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRTLGDLEAQHDAARGE-EEIAAVEEELRQLHRRREVIIERAFESDDESTRN 166          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE17_9PHAE1.300e-20049.58RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FS12_ECTSI1.110e-18154.09Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A835Z7T4_9STRA4.150e-3664.96RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
A0A836CMG7_9STRA3.360e-2041.91RWP-RK domain-containing protein n=1 Tax=Tribonema... [more]
A0A835Z1M5_9STRA1.320e-1536.80Putative NIN-like transcription factor n=1 Tax=Tri... [more]
A0A835YW93_9STRA2.210e-1558.21RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
H6WBB7_VAULI5.930e-1536.00Putative NIN-like transcription factor n=1 Tax=Vau... [more]
A0A835YTG3_9STRA2.140e-1436.21Putative NIN-like transcription factor n=1 Tax=Tri... [more]
A0A835YN08_9STRA7.660e-1439.60RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
D7FN15_ECTSI1.500e-1335.25Putative NIN-like transcription factor n=1 Tax=Ect... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:652355..655840 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTZ5
PFAMsRWP-RK
Model size3411
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.13e-12
EggNOG OGs2E5A6@1|root,2SC46@2759|Eukaryota
Ec32 ortholog descriptionNIN-like transcription factor
Ec32 orthologEc-12_006900.1
DescriptionRWP-RK domain
Cds size3411
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791454.1444008-CDS-P-littoralis_Contig7:652354..6542131680791454.1444008-CDS-P-littoralis_Contig7:652354..654213Pylaiella littoralis U1_48CDSP-littoralis_Contig7 652355..654213 +
1680791454.156703-CDS-P-littoralis_Contig7:654288..6558401680791454.156703-CDS-P-littoralis_Contig7:654288..655840Pylaiella littoralis U1_48CDSP-littoralis_Contig7 654289..655840 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.146.1prot_P-littoralis_Contig7.146.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig7 652355..655840 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig7.146.1

>prot_P-littoralis_Contig7.146.1 ID=prot_P-littoralis_Contig7.146.1|Name=mRNA_P-littoralis_Contig7.146.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1137bp
MALQQMSGGYADDARGPAPASSFKTLQRGIPSFKLTDDECARSKRFRHRV
PSAGGRDDTGRSSEGGVAMSTLLFEDACTTPDQVAAGPQRVPSFSVASEV
FRASHNSSWDSGAGCNIFGFGSASADGEGEDAVQRLDDVTLNDLNFLTTE
GVAPSDRPAGTAQRDSSAAAGLDTKPIKSCAATIAGGYNQYITGGGDAGG
GHSGNQLQATVPKEEKVVNEITGRTASARDTLSTTSSSRDILGPDITSRK
ISNSSILGTDVFDLEVGVPAFSASMEEYLNNQLDVAEESLDRSAEDECAF
GHSASDGSCGCGAEEISSCMDFAEEAGSSPVSSSTRSVVVKSERDRYPGG
PDEGSQDTASPPRVKAHGEDVKETTVGRRTRNVRGSQPQQRQQQPQQGQR
HESDEQTENSQSEYEPPTPREGKAKNVRGRGRAAAAATAPRAAKSRGGVV
GARMAGLPSAVVRRGTLKRQTSEDVAARLPLQVLECFYHVPLNLAAKQLS
VSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEEKIKVRKNSGKDAPSL
ARKLTQAKKRRRVIIKTASAGLDANVLNSIFTCRSGDIDEDLLLASTDVA
KVVQNMKFSRVVNHKDCKSGDNDSDSDSENDSDSDSDSDSDSDSDSVQAS
AVKRPCTTVPRKTPTSRAVFATPPCFPSKPPAAITSVSTPPPAFEPGGRT
KSIVATAKKSGTKSVVKTERVTMPAKRTRKVAASSGKGRKGATVVARSVP
SAGLAVSSLRRHSAPAAASPGLRKSDSSGLGNIAGGTSKPLAAAVVQSGS
SSTVFSFGSSQRSRAPMTGYSGVFGTGLHHQSLPVPSKGEKSTAITRGKG
SSGGVLGRASAAAKPGAGKSPSDVPPATRVPAWVGARGKRATGYGEWRGG
LSSSRSGLSQQRPSAVSSDSPTTTAPLDNNMNVSLESSPGGPVQSSSSRA
PPPPTPPAPPPPPAPPLPLHHHPYLLHHQFPHPHQQHPYFPHLNWVGGRY
TGPPPPQQPYGFSVEFMSPVDARFAPPQRGPYHGFSKVDGGGQFNAEADA
AATPTHRGTGSAIGEGGGEGGGEAQGAATTAPTAAAAAIFSEDAGPRRTG
FMSYLLHQGPQSPSPGSCPSPPAPPSAPVRATNFDL*
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mRNA from alignment at P-littoralis_Contig7:652355..655840+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig7.146.1 ID=mRNA_P-littoralis_Contig7.146.1|Name=mRNA_P-littoralis_Contig7.146.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3486bp|location=Sequence derived from alignment at P-littoralis_Contig7:652355..655840+ (Pylaiella littoralis U1_48)
ATGGCACTGCAGCAGATGAGCGGTGGTTACGCGGACGACGCGAGGGGCCC AGCGCCAGCGAGCAGCTTCAAAACGCTGCAGCGTGGCATCCCCAGCTTTA AGCTCACGGATGACGAGTGCGCCAGGTCTAAGAGGTTCCGCCATCGAGTC CCTAGCGCTGGTGGTCGCGATGACACCGGCAGAAGTAGCGAGGGAGGTGT GGCGATGTCCACGCTCTTATTTGAAGATGCCTGCACAACGCCAGACCAGG TAGCAGCGGGCCCGCAACGAGTGCCGTCGTTCTCGGTTGCTAGTGAAGTC TTCCGCGCGTCTCACAACTCCAGCTGGGACTCCGGCGCGGGGTGTAATAT TTTCGGCTTCGGGTCTGCGAGTGCGGACGGCGAGGGTGAGGATGCCGTTC AGAGGCTCGACGACGTAACCTTAAACGATCTGAACTTCCTGACCACGGAG GGCGTTGCCCCCAGCGACAGGCCAGCAGGCACAGCGCAAAGAGATTCGTC CGCCGCCGCCGGGCTGGACACGAAGCCAATCAAAAGTTGCGCTGCAACCA TAGCAGGAGGCTACAACCAGTATATTACTGGGGGTGGCGACGCTGGCGGA GGCCACAGCGGTAACCAGCTGCAGGCAACCGTCCCGAAAGAAGAAAAGGT GGTAAACGAGATTACCGGCAGGACCGCCAGCGCCCGTGACACCCTGAGCA CAACGAGTAGCAGCCGCGATATATTGGGACCTGATATTACGAGCAGGAAA ATCAGTAACTCCAGCATCTTGGGAACAGATGTGTTTGACCTGGAGGTGGG CGTACCGGCCTTCTCTGCCTCCATGGAAGAGTACTTGAACAACCAACTGG ACGTCGCCGAGGAATCTTTGGACCGTTCAGCTGAAGATGAGTGTGCTTTC GGACACAGCGCTAGCGACGGCAGCTGCGGCTGCGGTGCAGAAGAAATCTC CTCGTGCATGGATTTTGCTGAGGAGGCTGGCTCCTCGCCTGTCTCCTCCT CAACTCGTTCTGTAGTGGTTAAGTCCGAGCGTGACCGTTACCCCGGTGGC CCAGATGAAGGCTCGCAAGATACAGCCTCCCCTCCGCGCGTCAAAGCCCA CGGAGAAGATGTCAAGGAAACCACCGTCGGCCGGCGTACCAGGAATGTGA GGGGCTCGCAACCGCAACAACGGCAGCAACAGCCGCAGCAGGGGCAGAGG CATGAGAGCGACGAACAGACCGAAAACAGCCAAAGTGAGTATGAACCTCC CACGCCGAGGGAGGGCAAGGCAAAGAATGTGCGGGGAAGGGGGCGCGCCG CCGCTGCCGCCACTGCCCCGCGGGCGGCAAAGTCTAGGGGTGGTGTTGTC GGGGCGCGAATGGCGGGCTTGCCAAGCGCTGTTGTTCGCCGAGGCACGCT CAAGAGGCAGACCTCTGAGGACGTGGCCGCGAGACTCCCTCTACAAGTGC TGGAATGCTTCTACCATGTTCCTCTCAACCTCGCGGCGAAGCAGCTGAGC GTCAGCCTCACAATGCTGAAGAAGCTGTGCAGGGCGTACGGGGTGAAGCG CTGGCCTCACCGCCAGGTGAGTAGCCTGGACAAGACCACCTCTAAGCTAG AGGAGAAGATAAAGGTGCGCAAGAATAGCGGGAAGGACGCGCCTTCCCTC GCGAGAAAGCTCACGCAGGCCAAGAAGCGCCGCCGCGTCATCATCAAGAC CGCCAGCGCTGGCCTCGACGCTAACGTCCTCAACTCTATCTTCACCTGCC GCTCGGGCGACATCGACGAGGACTTGCTTCTTGCAAGCACTGACGTAGCT AAAGTCGTCCAGAACATGAAGTTCTCGCGGGTGGTCAACCATAAGGACTG TAAATCTGGGTCAGAATCGGACGAATCGGACGAATCGGACGACGACGACA GCGACAGCGACGACAGCGACAGCGACGGCGACAGCGACAACGACAGCGAC AGCGACAGCGAAAACGACAGCGACAGCGACAGCGACAGCGACAGCGACAG CGACAGCGACAGCGTCCAAGCCTCTGCGGTCAAGCGGCCGTGTACTACTG TCCCGCGGAAAACACCGACCAGTCGTGCCGTGTTCGCAACCCCTCCATGC TTCCCCTCCAAACCTCCTGCTGCTATCACGTCCGTGTCCACACCCCCGCC TGCTTTCGAGCCTGGTGGGCGCACAAAGAGCATCGTCGCCACTGCCAAGA AATCGGGTACGAAATCCGTCGTGAAAACGGAGCGCGTGACGATGCCGGCC AAGAGGACTAGGAAGGTAGCTGCGTCGTCGGGGAAGGGTCGAAAAGGGGC GACAGTTGTAGCACGGTCGGTACCATCCGCGGGCCTTGCGGTGTCCAGTC TGCGGAGACACAGCGCGCCGGCGGCCGCGTCACCGGGCTTGCGCAAATCC GACAGTTCTGGCCTCGGCAACATTGCTGGCGGCACCAGTAAACCACTGGC CGCTGCCGTCGTACAGTCGGGTTCCTCTTCTACGGTGTTTTCGTTCGGTA GTTCTCAACGCAGCAGAGCGCCGATGACCGGCTACTCTGGTGTGTTTGGC ACGGGTCTGCACCACCAATCTCTGCCGGTGCCCAGCAAGGGAGAAAAATC AACGGCAATTACACGAGGAAAGGGGAGCAGTGGAGGGGTGCTTGGACGGG CGTCCGCTGCTGCAAAGCCAGGAGCCGGGAAAAGTCCTTCTGACGTGCCA CCGGCTACGCGAGTGCCAGCATGGGTCGGGGCCCGGGGCAAACGGGCGAC GGGCTATGGGGAATGGCGCGGAGGTCTGTCGAGCTCGCGGTCAGGACTTT CCCAGCAGCGCCCCTCGGCCGTGAGTTCTGACTCTCCGACAACTACCGCT CCCCTGGACAACAACATGAACGTGAGCCTGGAGTCTTCTCCTGGGGGGCC GGTTCAATCGTCCTCCTCCCGGGCGCCGCCGCCCCCAACGCCCCCGGCGC CCCCGCCGCCCCCCGCGCCGCCGCTTCCCCTCCACCATCACCCCTATCTG CTGCACCACCAGTTCCCGCATCCGCATCAGCAGCACCCGTACTTCCCCCA CCTCAACTGGGTTGGCGGGCGATACACAGGGCCGCCGCCGCCGCAACAGC CCTACGGGTTTTCCGTGGAGTTCATGTCCCCCGTCGACGCCCGCTTTGCC CCGCCGCAGCGTGGACCGTACCACGGATTTTCCAAGGTGGACGGTGGCGG CCAGTTCAACGCTGAGGCCGACGCCGCCGCCACTCCGACTCACCGTGGTA CCGGTAGCGCGATAGGTGAGGGCGGGGGAGAGGGCGGGGGAGAGGCACAG GGGGCGGCGACGACGGCACCGACGGCCGCGGCTGCAGCCATCTTCTCCGA AGATGCAGGACCTCGTCGCACGGGATTTATGAGCTACCTACTGCACCAAG GGCCCCAGAGCCCATCCCCGGGCTCCTGCCCCTCTCCTCCCGCCCCTCCT TCCGCACCCGTCAGGGCAACAAATTTTGACTTGTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig7:652355..655840+

>mRNA_P-littoralis_Contig7.146.1 ID=mRNA_P-littoralis_Contig7.146.1|Name=mRNA_P-littoralis_Contig7.146.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3411bp|location=Sequence derived from alignment at P-littoralis_Contig7:652355..655840+ (Pylaiella littoralis U1_48)
ATGGCACTGCAGCAGATGAGCGGTGGTTACGCGGACGACGCGAGGGGCCC
AGCGCCAGCGAGCAGCTTCAAAACGCTGCAGCGTGGCATCCCCAGCTTTA
AGCTCACGGATGACGAGTGCGCCAGGTCTAAGAGGTTCCGCCATCGAGTC
CCTAGCGCTGGTGGTCGCGATGACACCGGCAGAAGTAGCGAGGGAGGTGT
GGCGATGTCCACGCTCTTATTTGAAGATGCCTGCACAACGCCAGACCAGG
TAGCAGCGGGCCCGCAACGAGTGCCGTCGTTCTCGGTTGCTAGTGAAGTC
TTCCGCGCGTCTCACAACTCCAGCTGGGACTCCGGCGCGGGGTGTAATAT
TTTCGGCTTCGGGTCTGCGAGTGCGGACGGCGAGGGTGAGGATGCCGTTC
AGAGGCTCGACGACGTAACCTTAAACGATCTGAACTTCCTGACCACGGAG
GGCGTTGCCCCCAGCGACAGGCCAGCAGGCACAGCGCAAAGAGATTCGTC
CGCCGCCGCCGGGCTGGACACGAAGCCAATCAAAAGTTGCGCTGCAACCA
TAGCAGGAGGCTACAACCAGTATATTACTGGGGGTGGCGACGCTGGCGGA
GGCCACAGCGGTAACCAGCTGCAGGCAACCGTCCCGAAAGAAGAAAAGGT
GGTAAACGAGATTACCGGCAGGACCGCCAGCGCCCGTGACACCCTGAGCA
CAACGAGTAGCAGCCGCGATATATTGGGACCTGATATTACGAGCAGGAAA
ATCAGTAACTCCAGCATCTTGGGAACAGATGTGTTTGACCTGGAGGTGGG
CGTACCGGCCTTCTCTGCCTCCATGGAAGAGTACTTGAACAACCAACTGG
ACGTCGCCGAGGAATCTTTGGACCGTTCAGCTGAAGATGAGTGTGCTTTC
GGACACAGCGCTAGCGACGGCAGCTGCGGCTGCGGTGCAGAAGAAATCTC
CTCGTGCATGGATTTTGCTGAGGAGGCTGGCTCCTCGCCTGTCTCCTCCT
CAACTCGTTCTGTAGTGGTTAAGTCCGAGCGTGACCGTTACCCCGGTGGC
CCAGATGAAGGCTCGCAAGATACAGCCTCCCCTCCGCGCGTCAAAGCCCA
CGGAGAAGATGTCAAGGAAACCACCGTCGGCCGGCGTACCAGGAATGTGA
GGGGCTCGCAACCGCAACAACGGCAGCAACAGCCGCAGCAGGGGCAGAGG
CATGAGAGCGACGAACAGACCGAAAACAGCCAAAGTGAGTATGAACCTCC
CACGCCGAGGGAGGGCAAGGCAAAGAATGTGCGGGGAAGGGGGCGCGCCG
CCGCTGCCGCCACTGCCCCGCGGGCGGCAAAGTCTAGGGGTGGTGTTGTC
GGGGCGCGAATGGCGGGCTTGCCAAGCGCTGTTGTTCGCCGAGGCACGCT
CAAGAGGCAGACCTCTGAGGACGTGGCCGCGAGACTCCCTCTACAAGTGC
TGGAATGCTTCTACCATGTTCCTCTCAACCTCGCGGCGAAGCAGCTGAGC
GTCAGCCTCACAATGCTGAAGAAGCTGTGCAGGGCGTACGGGGTGAAGCG
CTGGCCTCACCGCCAGGTGAGTAGCCTGGACAAGACCACCTCTAAGCTAG
AGGAGAAGATAAAGGTGCGCAAGAATAGCGGGAAGGACGCGCCTTCCCTC
GCGAGAAAGCTCACGCAGGCCAAGAAGCGCCGCCGCGTCATCATCAAGAC
CGCCAGCGCTGGCCTCGACGCTAACGTCCTCAACTCTATCTTCACCTGCC
GCTCGGGCGACATCGACGAGGACTTGCTTCTTGCAAGCACTGACGTAGCT
AAAGTCGTCCAGAACATGAAGTTCTCGCGGGTGGTCAACCATAAGGACTG
TAAATCTGGCGACAACGACAGCGACAGCGACAGCGAAAACGACAGCGACA
GCGACAGCGACAGCGACAGCGACAGCGACAGCGACAGCGTCCAAGCCTCT
GCGGTCAAGCGGCCGTGTACTACTGTCCCGCGGAAAACACCGACCAGTCG
TGCCGTGTTCGCAACCCCTCCATGCTTCCCCTCCAAACCTCCTGCTGCTA
TCACGTCCGTGTCCACACCCCCGCCTGCTTTCGAGCCTGGTGGGCGCACA
AAGAGCATCGTCGCCACTGCCAAGAAATCGGGTACGAAATCCGTCGTGAA
AACGGAGCGCGTGACGATGCCGGCCAAGAGGACTAGGAAGGTAGCTGCGT
CGTCGGGGAAGGGTCGAAAAGGGGCGACAGTTGTAGCACGGTCGGTACCA
TCCGCGGGCCTTGCGGTGTCCAGTCTGCGGAGACACAGCGCGCCGGCGGC
CGCGTCACCGGGCTTGCGCAAATCCGACAGTTCTGGCCTCGGCAACATTG
CTGGCGGCACCAGTAAACCACTGGCCGCTGCCGTCGTACAGTCGGGTTCC
TCTTCTACGGTGTTTTCGTTCGGTAGTTCTCAACGCAGCAGAGCGCCGAT
GACCGGCTACTCTGGTGTGTTTGGCACGGGTCTGCACCACCAATCTCTGC
CGGTGCCCAGCAAGGGAGAAAAATCAACGGCAATTACACGAGGAAAGGGG
AGCAGTGGAGGGGTGCTTGGACGGGCGTCCGCTGCTGCAAAGCCAGGAGC
CGGGAAAAGTCCTTCTGACGTGCCACCGGCTACGCGAGTGCCAGCATGGG
TCGGGGCCCGGGGCAAACGGGCGACGGGCTATGGGGAATGGCGCGGAGGT
CTGTCGAGCTCGCGGTCAGGACTTTCCCAGCAGCGCCCCTCGGCCGTGAG
TTCTGACTCTCCGACAACTACCGCTCCCCTGGACAACAACATGAACGTGA
GCCTGGAGTCTTCTCCTGGGGGGCCGGTTCAATCGTCCTCCTCCCGGGCG
CCGCCGCCCCCAACGCCCCCGGCGCCCCCGCCGCCCCCCGCGCCGCCGCT
TCCCCTCCACCATCACCCCTATCTGCTGCACCACCAGTTCCCGCATCCGC
ATCAGCAGCACCCGTACTTCCCCCACCTCAACTGGGTTGGCGGGCGATAC
ACAGGGCCGCCGCCGCCGCAACAGCCCTACGGGTTTTCCGTGGAGTTCAT
GTCCCCCGTCGACGCCCGCTTTGCCCCGCCGCAGCGTGGACCGTACCACG
GATTTTCCAAGGTGGACGGTGGCGGCCAGTTCAACGCTGAGGCCGACGCC
GCCGCCACTCCGACTCACCGTGGTACCGGTAGCGCGATAGGTGAGGGCGG
GGGAGAGGGCGGGGGAGAGGCACAGGGGGCGGCGACGACGGCACCGACGG
CCGCGGCTGCAGCCATCTTCTCCGAAGATGCAGGACCTCGTCGCACGGGA
TTTATGAGCTACCTACTGCACCAAGGGCCCCAGAGCCCATCCCCGGGCTC
CTGCCCCTCTCCTCCCGCCCCTCCTTCCGCACCCGTCAGGGCAACAAATT
TTGACTTGTAG
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