mRNA_P-littoralis_Contig697.29.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE) HSP 1 Score: 239 bits (611), Expect = 7.160e-70 Identity = 114/189 (60.32%), Postives = 133/189 (70.37%), Query Frame = 1
Query: 313 DGFVFAIRIGCLLHILHLAVNAGMQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMR 879
+G +FA+RIGC LH+LHLAVNAGM+ RSDSSCISW+ FQNLVFG KGV W KFIRPAETRWMV+W+ AA+LE+RW++VRWL +EWAA LL TPFM YWFK+ CML +PLIRVHAKFC AL K +LSWAYNW+RGEGGY L+G GV +RLP GMR
Sbjct: 259 EGPIFAVRIGCALHVLHLAVNAGMEC--------------------------------RSDSSCISWERFQNLVFGCKGVKWGCKFIRPAETRWMVVWDAAALLEDRWDEVRWLHLEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGRGGVAERLPAGMR 415
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE) HSP 1 Score: 210 bits (535), Expect = 1.150e-61 Identity = 102/166 (61.45%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 382 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMR 879
M+ FFMGPL + SWHEW HLVALL +LWYN SRSDSSCISW+ +NLVF +KGV+W KFIRPAETRWMVI + AA+LEERW++ +T ML +PLIRVHAKFC AL KA+LSWAYNW+RGEGGYFL+G GV +RLPPGMR
Sbjct: 1 MECEFFMGPLGKGSWHEWEDNHLVALLATLWYNISRSDSSCISWRRVKNLVFRAKGVMWICKFIRPAETRWMVIRDAAALLEERWDE------------------------STYMLDDPLIRVHAKFCVALRKAVLSWAYNWIRGEGGYFLEGTGGVAERLPPGMR 142
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: A0A6H5JW26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW26_9PHAE) HSP 1 Score: 189 bits (481), Expect = 3.730e-56 Identity = 89/168 (52.98%), Postives = 118/168 (70.24%), Query Frame = 1
Query: 382 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMR 879
M S FMGPL + SWHEW + H+ +LLG +WYNTSRS SS ++ ++ +V W KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH F L + + WAYNW+ G+GG+FLKG +GV +RL PGMR
Sbjct: 1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSGSSNGKFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLSPGMR 167
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: A0A6H5KSR2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR2_9PHAE) HSP 1 Score: 182 bits (461), Expect = 5.990e-54 Identity = 85/163 (52.15%), Postives = 115/163 (70.55%), Query Frame = 1
Query: 382 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRL 864
M S FMGPL + SWHEW + H+ +LLG +WYNTSRS SS +++ ++ +V W KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH F L + + WAYNW+ G+GG+FLKG +GV +RL
Sbjct: 1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSGSSNGNFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRL 162
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE) HSP 1 Score: 188 bits (477), Expect = 8.040e-53 Identity = 88/168 (52.38%), Postives = 118/168 (70.24%), Query Frame = 1
Query: 382 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMR 879
M S FMGPL + SWHEW + H+ +LLG +WYNTSRS+ S S++ ++ +V W KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH F L + + WAYNW+ G+GG+FLKG +GV +RL P MR
Sbjct: 1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSEPSNASFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLFPAMR 167
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI) HSP 1 Score: 186 bits (472), Expect = 8.820e-52 Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 1
Query: 382 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMR 879
M S++FMGPL + SWHEW + H+ +LLG +WYNTSRS+SS +++ ++ +V W KF+RPAETRWMV+ +GA +L +RWEQV WLF E+AA+ L +T F +YW ++ ML++PL+RVH F L + + WAYNW+RG+GG+FLKG +GV ++L PGMR
Sbjct: 1 MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIKFVRPAETRWMVVMDGAKLLCKRWEQVEWLFCEYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKG-EGVGRQLFPGMR 167
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: A0A6H5KH75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH75_9PHAE) HSP 1 Score: 166 bits (419), Expect = 1.110e-43 Identity = 91/231 (39.39%), Postives = 122/231 (52.81%), Query Frame = 1
Query: 382 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKF--------------------------------CGALHKA-------------------------------ILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMR 879
M S FMGPL + SWHEW + H+ +LLG +WYNTSRS+SS +++ ++ +V W KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH F G L+K + WAYNW+ G+GG+FLKG +GV +RL PGMR
Sbjct: 1 MTSALFMGPLGKGSWHEWERDHIFSLLGMVWYNTSRSESSNANFQRWKRIVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAAKGSXCERWEQVEWLFCEYAAGNLNKTTYRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLSPGMR 230
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: A0A6H5KE81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE81_9PHAE) HSP 1 Score: 141 bits (356), Expect = 2.800e-37 Identity = 70/139 (50.36%), Postives = 94/139 (67.63%), Query Frame = 1
Query: 469 LWYNTSRSDSSCISWKIFQNLVFGSKGVL--WKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMR 879
+WYNTSRS+SS ++ +Q LV W KFI+PAETRWMV+ +GA IL ERW++V WLF EWAA + +T + +YW K+ LQ+PL+ V F L + + WAYNW+RG+GG+FLK +GV +RL PGMR
Sbjct: 2 VWYNTSRSNSSNTNFLRWQKLVADEFPAAKPWTKKFIKPAETRWMVVMDGAKILFERWDEVAWLFGEWAACNIGKTTYRNYWLKSAVALQDPLMLVQVMFAARLGELVFDWAYNWIRGKGGFFLKC-EGVGRRLFPGMR 139
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: A0A6H5KP72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP72_9PHAE) HSP 1 Score: 129 bits (324), Expect = 3.230e-33 Identity = 69/166 (41.57%), Postives = 95/166 (57.23%), Query Frame = 1
Query: 382 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMR 879
M SL+FMGPL + SWHEW + H+ +LLG +WY+TSRS+SS N F +RW++V L E+AA+ L +T F +YW ++ ML+NPL+RVH F L + + WA NW+RG+GG+FLKG +GV +RL PGMR
Sbjct: 1 MTSLYFMGPLGKGSWHEWERDHVFSLLGMVWYSTSRSESS--------NANF------------------------------QRWKRVEKLVREYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKG-EGVGRRLFPGMR 127
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE) HSP 1 Score: 129 bits (324), Expect = 3.710e-32 Identity = 69/166 (41.57%), Postives = 95/166 (57.23%), Query Frame = 1
Query: 382 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISWKIFQNLVFGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMR 879
M SL+FMGPL + SWHEW + H+ +LLG +WY+TSRS+SS N F +RW++V L E+AA+ L +T F +YW ++ ML+NPL+RVH F L + + WA NW+RG+GG+FLKG +GV +RL PGMR
Sbjct: 1 MTSLYFMGPLGKGSWHEWERDHVFSLLGMVWYSTSRSESS--------NANF------------------------------QRWKRVEKLVREYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKG-EGVGRRLFPGMR 127 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig697.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig697.29.1 >prot_P-littoralis_Contig697.29.1 ID=prot_P-littoralis_Contig697.29.1|Name=mRNA_P-littoralis_Contig697.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=224bp MADSAQGRGQQPQSNNQSQQAESEPAPAAAASAFDGFVFAIRIGCLLHILback to top mRNA from alignment at P-littoralis_Contig697:138139..139020- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig697.29.1 ID=mRNA_P-littoralis_Contig697.29.1|Name=mRNA_P-littoralis_Contig697.29.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=882bp|location=Sequence derived from alignment at P-littoralis_Contig697:138139..139020- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig697:138139..139020- >mRNA_P-littoralis_Contig697.29.1 ID=mRNA_P-littoralis_Contig697.29.1|Name=mRNA_P-littoralis_Contig697.29.1|organism=Pylaiella littoralis U1_48|type=CDS|length=672bp|location=Sequence derived from alignment at P-littoralis_Contig697:138139..139020- (Pylaiella littoralis U1_48)back to top |