mRNA_P-littoralis_Contig685.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig685.11.1 vs. uniprot
Match: D7G1V5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V5_ECTSI) HSP 1 Score: 146 bits (369), Expect = 3.530e-42 Identity = 81/151 (53.64%), Postives = 99/151 (65.56%), Query Frame = 1
Query: 1 MLAAAVAVENNWAELTRPYLKSQPNKGVGRNSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 453
MLAA+ V+ + + +LK Q N+GVGR A+RKLAK RSQ E A+ A+ AC+ GW G+EYF V KEC GA AA T E+ +DVSHAQAGKL+ QA AL+ VY KLL G S FE A L + V T+KQWE EYR KGHI +
Sbjct: 1 MLAASQEVDKHEKDWQPAFLKRQSNRGVGRKEALRKLAKHRSQLEKASLASAACKAGWEKGLEYFRAVAKECNGAVAA-TSAGLEETIDVSHAQAGKLLTQAQALRAVYSKLLQGVSKRQAFEGSAEFLELAVGTIKQWELEYRTKGHIVL 150
BLAST of mRNA_P-littoralis_Contig685.11.1 vs. uniprot
Match: A0A6H5LDJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDJ5_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.450e-35 Identity = 77/149 (51.68%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 4 LAAAVAVENNWAELTRP-YLKSQPNKGVGRNSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHI 447
++ AV + E+ RP +LK Q N+GVGR A+RKLAK RSQ E AA A+ ACR GW G +YF V KEC A A ++ E L VSHAQAG L L+A+ALKG+Y KLL G S FEE A V ST+++WE YR KGHI
Sbjct: 1 MSDAVKEAHQQEEVYRPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQFAVAVSSAGLNESVL-VSHAQAGSLQLKALALKGLYHKLLRGVSKRQAFEETAEFFEVASSTLREWELSYRTKGHI 148
BLAST of mRNA_P-littoralis_Contig685.11.1 vs. uniprot
Match: D8LEU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU9_ECTSI) HSP 1 Score: 128 bits (321), Expect = 1.040e-34 Identity = 73/149 (48.99%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 1 MLAAAVAVENNWAELTRPYLKSQPNKGVGRNSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHI 447
M AA V+ + + + +LK Q N+GV R A+ KLA RSQ E AA A+ A + GW GVEYF V KEC A AA T ++ +DVSHAQAGKL+++A+AL+ VY KLL G S FE A + + T+KQWE EYR KGHI
Sbjct: 28 MFDAAREVDRHEKDWRQAFLKRQSNRGVRRTEALGKLANHRSQLEKAALASAARKAGWEKGVEYFRAVVKECQSAVAA-TSAGLDETMDVSHAQAGKLLIKALALRAVYSKLLEGVSRREAFEASAEFVEMSEGTIKQWELEYRTKGHI 175
BLAST of mRNA_P-littoralis_Contig685.11.1 vs. uniprot
Match: A0A6H5JGM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM4_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.820e-22 Identity = 65/153 (42.48%), Postives = 81/153 (52.94%), Query Frame = 1
Query: 4 LAAAVAVENNWAELTRP---YLKSQPNKGVGRNSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 453
++ AV + E+ RP +LK Q N R A+RKL K RSQ E AA A+ ACR GW G +YF V KEC A A + + AG L +A+ALKG+Y KLL G FEE A V ST+++WE YR KGHI V
Sbjct: 143 MSDAVKEAHQQEEVYRPAXAFLKRQSN---SRKEALRKLTKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAVTS----------AGLNAGSLQFKALALKGLYHKLLRGVPKRQAFEETAEFFQVASSTLREWELSYRTKGHIQV 282
BLAST of mRNA_P-littoralis_Contig685.11.1 vs. uniprot
Match: A0A6H5K534_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K534_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 2.940e-21 Identity = 63/151 (41.72%), Postives = 78/151 (51.66%), Query Frame = 1
Query: 4 LAAAVAVENNWAELTRP-YLKSQPNKGVGRNSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 453
++ AV + E RP +LK Q N+G+ E AA A+ ACR GW G +YF V KEC A A + E L VSH QAG L +A+AL G+Y KLL G S FEE A V ST+++WE YR KGHI V
Sbjct: 191 MSDAVKEAHQQEEACRPAFLKRQSNRGL----------------EKAAAASAACRSGWERGQDYFRVVIKECQSAVAVTSAGLNESVL-VSHTQAGSLQFKALALNGLYHKLLRGVSKRQAFEETAEFFEVAFSTLREWELSYRTKGHIQV 324
BLAST of mRNA_P-littoralis_Contig685.11.1 vs. uniprot
Match: A0A6H5KFI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI8_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 4.830e-14 Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 253 EQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHI 447
++P+DVSHAQAGKL+ +A AL+GVY KLL G S FEE A L V V T+KQWE EYR KG I
Sbjct: 4 QEPIDVSHAQAGKLLTKAHALRGVYSKLLKGVSKRQAFEESAEFLQVSVGTIKQWELEYRTKGRI 68
BLAST of mRNA_P-littoralis_Contig685.11.1 vs. uniprot
Match: A0A6H5KDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP5_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 3.200e-10 Identity = 36/69 (52.17%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 247 DAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 453
D ++ + VSHAQAG L +A+ALKG+Y KLL G S FEE A V ST ++WE YR KGHI V
Sbjct: 52 DPKESVFVSHAQAGSLQFKALALKGLYHKLLRGVSKRQAFEETAEFFEVASSTPREWELSYRTKGHIQV 120
BLAST of mRNA_P-littoralis_Contig685.11.1 vs. uniprot
Match: A0A6H5KM80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM80_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 1.530e-6 Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 262 LDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWERE 426
+DVSHAQAGKL+++A+AL+ V KLL G S FE A + + T+KQWE E
Sbjct: 1 MDVSHAQAGKLLIKALALRAVSTKLLKGVSRREAFEASAEFIEMSEGTIKQWELE 55 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig685.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig685.11.1 >prot_P-littoralis_Contig685.11.1 ID=prot_P-littoralis_Contig685.11.1|Name=mRNA_P-littoralis_Contig685.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=151bp MLAAAVAVENNWAELTRPYLKSQPNKGVGRNSAIRKLAKKRSQWENAATAback to top mRNA from alignment at P-littoralis_Contig685:58775..59533+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig685.11.1 ID=mRNA_P-littoralis_Contig685.11.1|Name=mRNA_P-littoralis_Contig685.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=759bp|location=Sequence derived from alignment at P-littoralis_Contig685:58775..59533+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig685:58775..59533+ >mRNA_P-littoralis_Contig685.11.1 ID=mRNA_P-littoralis_Contig685.11.1|Name=mRNA_P-littoralis_Contig685.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=453bp|location=Sequence derived from alignment at P-littoralis_Contig685:58775..59533+ (Pylaiella littoralis U1_48)back to top |