mRNA_P-littoralis_Contig682.13.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig682.13.3
Unique NamemRNA_P-littoralis_Contig682.13.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: A0A6H5JCH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH5_9PHAE)

HSP 1 Score: 423 bits (1088), Expect = 1.870e-134
Identity = 311/560 (55.54%), Postives = 352/560 (62.86%), Query Frame = 3 
Query:  156 TMARLGRRRALLVCLVELVRIPAGGWLSAH-AFINSASXXXXXXXXXXXXXGRHDFQQXXXRQLNLTPTEEWRWRGMMRRRPRSVAMQASQGAFPSLARIPLPPGGGIYEGQKNEKEKREEADFNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLVHELSTVFRLSYDGSRQQ---------------------------------------VRVTWHFILDASPMVARPIHVDGTSVYSLSSKGLVRRHEVETIIVNGTPVKPPFAQAWMHLPPWVTQGLNGGAAGAPGLTSSXXXXXXXXXXGTVRG---GWRNVGGRSGGRFGREGSGKLRDVSERAPATIVSGLGGTALSFQG-AGVAAAVAGRRRPSEPLAEAIGKDSARFRVISSSSVWKAASEGSGGEGSSLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----------FWPIEYDGPLGCETSFDCTGGYVCCDLIVIKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQ 1673
            TMA   R+  LL+CLVELV  PA    SA  AF+N+                    Q+    QL ++            RR    A QASQG FPS+AR P+P  G IYEG+K EKEKRE+A+FN N+GKV++TLRE Y  + DEPL+FDIYTPDLQLRDPSGV+LTGLPAYKRMF T RF RKTLVH++STVFRLSYDGSRQQ                                       VRVTWH +LDA+PMVARP+H+DGTSVY LS++GLVRRH++ETIIVNGTPVKPPFAQAWM LP WVTQG +GG AGAPG+TS           G VRG    +   G RSGG+F R                I   L GTA++FQG A V AA   RRR  + L  A+G D++                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            WPI+Y GPL CETSFDCTGGYVCCDL+V+KICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQ
Sbjct:    8 TMACSKRKGTLLLCLVELVCYPADVGSSARQAFVNAGISSSSRNCCS---------QRVKHHQLKVSM-----------RRTCGAASQASQGVFPSVARSPMP-AGEIYEGEKKEKEKREQAEFNTNLGKVIDTLREDYPTMLDEPLNFDIYTPDLQLRDPSGVILTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQDDEQLLVHPCEMQPWTGRNDWPSVIGSVGNNAPSSRGRVVRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDLETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGMTS-------VSSSGGVRGEIDDFDRSGRRSGGKFERR---------------IPMDLSGTAMAFQGLAEVRAASITRRR--KGLLAAVGFDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQ 522
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BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: D8LJ76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ76_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 1.400e-129
Identity = 266/405 (65.68%), Postives = 294/405 (72.59%), Query Frame = 3 
Query:  462 PGGGIYEGQKNEKEKREEADFNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLVHELSTVFRLSYDGSRQQVRVTWHFILDASPMVARPIHVDGTSVYSLSSKGLVRRHEVETIIVNGTPVKPPFAQAWMHLPPWVTQGLNGGAAGAPGLTSSXXXXXXXXXXGTVRGGWRNVGGRSGGRFGREGSGKLRDVSERAPATIVSGLGGTALSFQG-AGVAAAVAGRRRPSEPLAEAIGKDSARFRVISSSSVWKAASEGSGGEGSSLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFWPIEYDGPLGCETSFDCTGGYVCCDLIVIKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQ 1673
            P G IYEG+KNEKEKRE+ +FN N+GKV++TLRE Y  + DEPL+F+IYTPDLQLRDPSGVVLTGLPAYKRMF T RF RKTLVH++STVFRLSYDGSRQQVR+TWH +LDA+PMV RP+H+DGTSVY LS++GLVRRH+VETIIVNGTPVKPPFAQAWM LP WVTQG +GG AGAPG+ S           G V GG  +       R GR  SG   +   R P      L GTA++FQG AGV AA   R                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   WPI+Y GPL CETSFDCTGGYVCCDL+V+KICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQ
Sbjct:    2 PAGEIYEGEKNEKEKREQTEFNTNLGKVIDTLREDYATMLDEPLNFEIYTPDLQLRDPSGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRITWHLVLDATPMVVRPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGMIS------VSSSSGDVWGGMDDFN-----RSGRRRSGG--NFERRIPVD----LSGTAMAFQGLAGVRAASITRXXXXXXX--------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQ 357
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BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: A0A6H5KRU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRU5_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.190e-58
Identity = 186/424 (43.87%), Postives = 240/424 (56.60%), Query Frame = 3 
Query:  402 SVAMQASQGAFPSLARIPLP---PGGGIYEGQKNEKEKREEADFNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLVHELSTVFRLSYDGSRQQVRVTWHFILDASPMVARPIHVDGTSVYSLSSKGLVRRHEVETIIVNGTPVKPPFAQAWMHLPPWVTQGLNGGAAGAPGLTSSXXXXXXXXXXGTVRGGWRNVGGRSGGRFGREGSGKLRDVSERAPATIVSGLGGTALSFQGAGVAAAVAGRRRPSEPLAEAIGKDSARFRVISSSSVWKAASEGSGGEGSSLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFWPIEYDGPLGCETSFDCTGGYVCCDLIVIKICCSNGVMQRKPGDLIPSLIPIPGRGRTELD 1664
            S A  AS   FPS+ R P P      G  +    E++  +  DF  N+GKV+ TLRE Y  IF +P  FDI+T +++LRDP+GV   G+  YKR+FATLRF R+T +++ +T FRL+YD S+QQVRVTW+ +L       RPI+VDG S Y ++S GL  RH++ET++VNG  V+PPFA AW++LP WV++G     +GA     +                   +GG                    AP  +     G A    GA   AA     R    L     +  +   ++ +  V +     SG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      W       L CETS+DCTGG VCCD +++K+CCSNG+ Q K G+LIPSL+PIPGRGR E D
Sbjct:   91 SGAQLASSLIFPSITRQPRPGIIARDGTEDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKAR-QRPIYVDGISAYHINSDGLAHRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPSGAGAALPTPHAV---------------IGG--------------------APTQLFEQQQGEAEDAVGAMFDAA-----RTDSELRGDYMQALSTVLMMDTDGVSE-----SGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNNAGGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNEND 468
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BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: A0A8J5XCD4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCD4_DIALT)

HSP 1 Score: 108 bits (269), Expect = 8.800e-22
Identity = 64/196 (32.65%), Postives = 103/196 (52.55%), Query Frame = 3 
Query:  390 RRPRSVAMQASQGAFPSLARIPLPPGGGIYE----------GQKNEKEKREEADFNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLVHELSTVFRLSYDG-SRQQVRVTWHFILDASPMVARPIHVDGTSVYSLSSKGLVRRHEVETIIVNGTPVKPPFAQAWMH 944
            RRP    +  S  + P++  +P P    + +          G  ++ E++ + +F  NVGKV++TL+  Y  +F++  DF I+   ++L DPSGV + GL  Y+  F  LR  R T+        ++ Y G    +VRV W+    ++    R   +DG S Y+LS +GLVRRH ++ IIVNG  V+ PF   W++
Sbjct:   18 RRPAVRHVLRSSVSPPAVPTVPSPAASTVKQEDGAPFFNSNGPHDDDERKRQTEFRLNVGKVIDTLQTDYPVLFEQSPDFSIFESCIELTDPSGVSIRGLSMYRSCFTLLRLMRYTMA-SAEMKCKVCYAGWDPYKVRVRWNLAFSSALSPGRTYFIDGVSAYTLSERGLVRRHSLDNIIVNGREVEQPFL-TWIN 211
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BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: A0A7R9WVZ4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVZ4_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.080e-19
Identity = 52/141 (36.88%), Postives = 78/141 (55.32%), Query Frame = 3 
Query:  510 EEADFNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLVHELSTV-FRLSYDGSRQQVRVTWHFILDASPMVARPIHVDGTSVYSLS-SKGLVRRHEVETIIVNGTPVKPPF 926
            E  +F  N+GK ++T+R+    I     D+ IY  D+ + DPSGV + GL  YK     L+   K    E S + FR+ YD  R  ++V+W+ +L     + RP++VDG SVY L    G +  H+ E +I+N TPV PP+
Sbjct:   72 ERREFQMNLGKAMDTIRKDMPEILRRKPDYSIYHKDITVVDPSGVTIQGLDNYKSSIKFLQTFLKFWFKERSGLQFRMVYDFCRSSIKVSWNAVLIPKVPLGRPVYVDGISVYKLDVESGKIMEHKFENLIINNTPVVPPY 212
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BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: A0A7S2NRZ5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NRZ5_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 9.880e-17
Identity = 46/140 (32.86%), Postives = 83/140 (59.29%), Query Frame = 3 
Query:  522 FNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLVHELSTVF--RLSYDGSRQQVRVTWHFILDASPM--VARPIHVDGTSVYSL-SSKGLVRRHEVETIIVNGTPVKPPF 926
            F  N+GK ++TLR+ Y  +     +F+I++ D+ + DPSGV ++GL  YK  F  L+   K   +   ++   R+ YD +R  +R++W+ +L    +  V   ++VDG S+Y + +S G +  H+VE +++N  PV+PP+
Sbjct:   81 FELNLGKAMDTLRKDYPKMLTREPNFEIFSDDISVVDPSGVQISGLSNYKSSFRFLQTLIKWFYNSDRSIIQHRMVYDWARSSIRISWNAVLVPKVVGNVRNSLYVDGISIYKMDASSGKIVEHKVEKMMINNIPVRPPY 220
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BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: K0SJZ8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJZ8_THAOC)

HSP 1 Score: 83.6 bits (205), Expect = 8.270e-13
Identity = 46/141 (32.62%), Postives = 78/141 (55.32%), Query Frame = 3 
Query:  519 DFNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLVHELS---TVFRLSYDGSRQQVRVTWHFILDASPMVA---RPIHVDGTSVYSLSSK-GLVRRHEVETIIVNGTPVKP 920
            +F  ++G+ V+TL+  Y  +  +   + IY  D+++ DP+GV L GLP YKR F+ +    +    E     T  R +YD +R+ +RV+W+  L    +     R +H+DG S YSL  + GL+  H+V  +++N   V+P
Sbjct:  225 EFEMSLGRAVDTLKADYPKLLTKDPSWHIYHQDIEVIDPTGVSLHGLPYYKRAFSFIHTLVQWFYCEEKSGLTSIRCAYDWARKVIRVSWNVELTPKKIYGGEWRMLHIDGISEYSLDRESGLITEHKVTNLLINDQAVRP 365
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BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: A0A1Z5KK75_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK75_FISSO)

HSP 1 Score: 82.4 bits (202), Expect = 1.060e-12
Identity = 46/145 (31.72%), Postives = 79/145 (54.48%), Query Frame = 3 
Query:  519 DFNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLV--HELSTVFRLSYDGSRQQVRVTWHFILDASPMVARPI--------HVDGTSVYSLSS-KGLVRRHEVETIIVNGTPVKP 920
            +F   VG+ ++ LR  Y  I  +  +F+IY+ D+++ DPSGV + G+ AYK  F  L    + +      S  FR+ +D +RQ +R+ W+     + ++ R I        HVDG SVY +S   G + +H +E +++N  P++P
Sbjct:   81 EFELRVGRALDILRSDYPDILTKQPNFNIYSNDIEVVDPSGVKVHGISAYKNSFRILHALVRFIYCPARSSLTFRMCFDKARQNIRIHWN-----AEVIPREIFGGSRTTLHVDGISVYEISQVTGEIVQHRIEHLLMNNMPIQP 220
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BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: A0A7S2BP96_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BP96_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.150e-12
Identity = 44/146 (30.14%), Postives = 76/146 (52.05%), Query Frame = 3 
Query:  492 NEKEKREEADFNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLVHELSTV-FRLSYDGSRQQVR--VTWHFILDASPMVARPIHVDGTSVYSLSSKGLVRRHEVETIIVNGTPVKP 920
            ++K   E  +FN NVG  ++TLR     +  +  D  I+  D+++ DP+G  L G+  Y +M+  LR      + + S +  R  +D SR  +R  V+    +   P  A P+H+D  S Y   +KG+V +H V+ + ++GT  +P
Sbjct:   44 SDKTANEAQEFNLNVGSAIDTLRSDIPSLLHKAPDLSIFRDDVRVFDPNGEKLRGIAQYSQMYRVLRGMSSIALQDSSKIDARFFFDKSRSTLRSKVSAKLWIHGMPASAEPMHIDVVSSYEFDAKGIVMKHTVDRVDIDGTRTEP 189
[Close]
BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Match: A0A8J5XGT7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XGT7_DIALT)

HSP 1 Score: 77.0 bits (188), Expect = 4.200e-12
Identity = 47/130 (36.15%), Postives = 68/130 (52.31%), Query Frame = 3 
Query:  507 REEADFNRNVGKVVETLRESYQHIFDEPLDFDIYTPDLQLRDP-SGVVLTGLPAYKRMFATLRFARKTLVHELSTVFRLSYDGSRQQVRVTWHFILDASPMVARP-IHVDGTSVYSLSSKGLVRRHEVET 890
            R ++DF+ NVG+ ++ L+  Y  +       DI+   +QL D  +G+VLTG  AY R  + LR+     +    T   L +D    Q+R  W   L      A P + VDG SVYSL S+GLV RHE+ +
Sbjct:   44 RPQSDFHANVGRCIDALQREYPTMLMLEPTLDIFAEHVQLVDAHTGLVLTGKRAYARALSALRWVAGASLSSAETGVLLVFDPIASQIRARWSAKLHLRGREAEPPVVVDGVSVYSLDSRGLVCRHELRS 173
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig682.13.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5JCH5_9PHAE1.870e-13455.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ76_ECTSI1.400e-12965.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRU5_9PHAE1.190e-5843.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J5XCD4_DIALT8.800e-2232.65Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7R9WVZ4_9STRA1.080e-1936.88Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2NRZ5_9STRA9.880e-1732.86Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
K0SJZ8_THAOC8.270e-1332.62Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1Z5KK75_FISSO1.060e-1231.72Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2BP96_9STRA1.150e-1230.14Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A8J5XGT7_DIALT4.200e-1236.15Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig682contigP-littoralis_Contig682:75638..83798 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJ76
PFAMsDUF2358
Model size2895
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons4
Evalue1.2e-136
EggNOG OGs2CYHV@1|root,2S4H3@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-02_005050.1
DescriptionUncharacterized conserved protein (DUF2358)
Cds size1527
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig682.13.3prot_P-littoralis_Contig682.13.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig682 76339..82588 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791419.430889-UTR-P-littoralis_Contig682:75637..757251680791419.430889-UTR-P-littoralis_Contig682:75637..75725Pylaiella littoralis U1_48UTRP-littoralis_Contig682 75638..75725 +
1680791419.4483306-UTR-P-littoralis_Contig682:76268..763381680791419.4483306-UTR-P-littoralis_Contig682:76268..76338Pylaiella littoralis U1_48UTRP-littoralis_Contig682 76269..76338 +
1680791419.5126083-UTR-P-littoralis_Contig682:82588..837981680791419.5126083-UTR-P-littoralis_Contig682:82588..83798Pylaiella littoralis U1_48UTRP-littoralis_Contig682 82589..83798 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791419.4776826-CDS-P-littoralis_Contig682:76338..768151680791419.4776826-CDS-P-littoralis_Contig682:76338..76815Pylaiella littoralis U1_48CDSP-littoralis_Contig682 76339..76815 +
1680791419.4883935-CDS-P-littoralis_Contig682:80766..808951680791419.4883935-CDS-P-littoralis_Contig682:80766..80895Pylaiella littoralis U1_48CDSP-littoralis_Contig682 80767..80895 +
1680791419.5022779-CDS-P-littoralis_Contig682:81667..825881680791419.5022779-CDS-P-littoralis_Contig682:81667..82588Pylaiella littoralis U1_48CDSP-littoralis_Contig682 81668..82588 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig682.13.3

>prot_P-littoralis_Contig682.13.3 ID=prot_P-littoralis_Contig682.13.3|Name=mRNA_P-littoralis_Contig682.13.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=509bp
MARLGRRRALLVCLVELVRIPAGGWLSAHAFINSASSSRRSSSSGGGSSG
RHDFQQQQQRQLNLTPTEEWRWRGMMRRRPRSVAMQASQGAFPSLARIPL
PPGGGIYEGQKNEKEKREEADFNRNVGKVVETLRESYQHIFDEPLDFDIY
TPDLQLRDPSGVVLTGLPAYKRMFATLRFARKTLVHELSTVFRLSYDGSR
QQVRVTWHFILDASPMVARPIHVDGTSVYSLSSKGLVRRHEVETIIVNGT
PVKPPFAQAWMHLPPWVTQGLNGGAAGAPGLTSSSSSSSSSSSSGTVRGG
WRNVGGRSGGRFGREGSGKLRDVSERAPATIVSGLGGTALSFQGAGVAAA
VAGRRRPSEPLAEAIGKDSARFRVISSSSVWKAASEGSGGEGSSLPAAGG
EEEGRSSSSTHDEEDRGSGKGETASEESKVTNTRKKKKKKFWPIEYDGPL
GCETSFDCTGGYVCCDLIVIKICCSNGVMQRKPGDLIPSLIPIPGRGRTE
LDQCQMAR*
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mRNA from alignment at P-littoralis_Contig682:75638..83798+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig682.13.3 ID=mRNA_P-littoralis_Contig682.13.3|Name=mRNA_P-littoralis_Contig682.13.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=8161bp|location=Sequence derived from alignment at P-littoralis_Contig682:75638..83798+ (Pylaiella littoralis U1_48)
GGGCGATCACGCGTAATACACGCAAAATAATCGTCTCGAAAACGTCGACG
GAGAGGGATGGCTGGACTACAGTAGTACCGGCCCGCAAGTAAGAAACACA
TGAGTAAGAAAATGAGGCTTGGATACTTTTGAAAATTAATTTAAGAAATT
CGGCGTGAACACACTGGCTCCGAATCCGCTCAGAAGCCGGCCCCATTTAA
ATATTACTTCGAAGTATCATATGGAAGCTAATAAACGGCGTGCTCTCACG
GTGGTCACAAAACAAGAAATCCAGGCTCAGGGGTGATATTCAGTGTCCTA
TGTGCGGGCCGGTGTACTGCCGTACAGACAGGCAGTTGGTGAATATCCCC
GAAGGAGAAGTAAAGGTGGAGGAAAAACAAAGACTCAGGTGTTGGGCTTC
GTTCTTTGTGACCCCGGGCGGGGTGGTGCCCTCAACTTGAACCGAAAGGT
GTAGACCGGCGTCCAGTCCATCCAGCAGTATTTTACAAATGCGGGAAGGG
AAAAAAGATCGGATGGATCCAACCGTCGTCGTGATTTTTTTAGAACTTCG
ACCCCAGTCCCCGCACGATGACACCGCTTCACACATGTGTTTTCGAACTC
CCGGGGGGCACGACAACAACAACAACATCAGGCAGGGTACGGCGTGATTT
GGTCAAACGTGCATGTGACACGAGGGAGAGTCAGTGCGTTCGACAACCAC
CATGGCTCGTTTAGGCAGGCGAAGGGCACTATTGGTGTGCTTGGTAGAAC
TAGTGCGCATTCCAGCCGGCGGATGGCTTTCAGCCCATGCCTTCATCAAC
TCTGCCAGCAGCAGCAGGCGGAGCAGCAGCAGCGGCGGGGGTAGCAGCGG
GAGACACGACTTTCAACAACAACAGCAGCGGCAGTTGAACCTCACGCCGA
CTGAGGAATGGCGATGGCGAGGCATGATGCGCCGACGACCACGCAGCGTT
GCGATGCAGGCATCCCAAGGTGCATTCCCCTCGTTGGCCAGGATCCCGCT
GCCCCCGGGCGGCGGCATCTATGAAGGCCAAAAGAACGAGAAGGAAAAAC
GAGAGGAGGCCGACTTCAACAGGAATGTCGGCAAAGTGGTAGAGACTCTG
CGGGAGAGCTATCAGCACATCTTCGACGAGCCCTTGGACTTCGACATCTA
CACTCCGGACTTGCAGCTTCGCGATCCGGTGAGACCCCGCCTTGCTGTTG
CTGCTACTACTGCTGTACCGCTGTTCGTTCTTCTGTTTTCGGTGCGTGTT
GCTACTGCTGATCGGTGCTCCGGGGGCGTTTCGCAGCTAGATCGTTCATG
ATGCATCTGGTTGGTGCCTCGGTCTCCAGTCTCTTCTTCTTGAAGGCAGG
CCTGCCCTCCCCACTGCTGCTGCTGTGTCGAGTTTCTTTAAAAAAAAAAA
AAAACAGACACATCACACGTACGTACAGCGGTAGTGGTGTTTTGTTTTTT
TTAACTTACATAAAAAAAATATCAATGTCTTGGCAAGAAAATAAAAAACA
TCAATGTGTTCGCCTCTCTCCAGACAAGGATCTGGAGCGGATATTGCAAC
GAACAGAAAGAGTGGAATACGTCTACCAGTGTTTCTATACTCAGCAGACA
ATGTACCGTTGCAGCTCCCCTGAGGGTATCAGGCTCAACAAGACAATTTG
GTGGTCGTCTTGTGTGACACACGTTACACCATGAGTTTGAGTGTTTGCGA
TCTATATTTGTGCTGTTTGCATCATCCTTGGCATGGTGATGGTGGTGATT
TGATGCTTTTCGTGCAGCAGTAGATTTTACGTTTCTACAGACAAGAACAC
CGCTTTGAATTCCACAAATATATGCAATCTACCCTCATGGTACTACATAC
TTTACGTTTTTATACGTATAACGAAGTACGATCCATCCGTGATGGCCCAT
TCACGAAGGACATGCATGTGTATAGCTACGTTACTCTCCACAACTCATAC
TATAATCGCATGTACTTATTATGTAGCGGGGTGCAACATATATTCTACAT
TCGATAGCCTCACCAAGTTTGACGTGTAAGTTGTCCAGTGCGGTTCATTT
GATGCAGAATGGTGTTTCAGAGTTCGACGATTCACCTCTATTCGGCGGCG
CGGGGTCACTCTTCATTAAAGGTGACAGGAATATAGGACACGCTCGGAAA
AGCACACGGTGTGGTCATAAGTATTAATCATACGATACGAGATGCTCAGT
CAGGCTCAGGCTAGAGAAGAAGGCGAGTAAGGCTATCGCATAGTCGACCA
TTTTCTCCGATCCTATGTACAAATCCGGTCATCGTTCCGATCCTCTTCTG
GATTCCCGGACAAGTCGTTACTTCGGAGACCATGAGGGAATGTTTGTCCG
GCAGATCTCTCCTATTCTGTGTGTTTTGGATGATGTAATTTCAGGGAGCA
CGTGTGCACGTGTGTCTCCATTTTCCCTTACAAGGAAAACGCGATTCCAT
GGTGTGACAGAGACAGCAGCAGTATCCACCGTAGTATTGTGCTTTCACTT
CCCCCACGGAAAAAAAAACTCCTGTGTTGACTTCCTACTGTGTGACCCCG
GTTGGCGCGTCTACCTACCCGAAAGGTGTAGAGTGGCGTCCAACTAAAGG
GACGACAACACACACACACATATGGAAGAGGATCCTTTTTTATTTGGTGA
AACTGCACTACAGCCAGTCAGGGTGGGGAGACATGTTTATTTTTCATGTA
CCCGATCTGGGGCTTTTCTTCACATTGAGCGTGAAAGTGGAAAGCGATCA
ATTCGTGAGTAAACAAAATTCGATCGTACCACCGACGAGGGAAAGGGATT
GCTGCCATCGACGAGGGAAAGGGATCGCTGTCCCCTTTCTCGCGATAAAA
GCTCAACCAAACAAGGCAAGCACCGCAGAGGGAAGTAGTGGAGAAAAAAA
AAAAAAAAACTCCTGTGTTGACTTCCCCCTGTGTGACCCCGGTTGGAGCG
TCTACCTACCCGAAAGGTGCAGAGTGGCGTCCAATGAAAGGGATGACAAC
ACACACACTTATCAAAATCTGCGTGATCTCCCCCCCGTGAGGAGGGGATA
TATTTTTTGTGAAAAAATGCACCCCCCTTTGCGGAGCAGAAATAATCGTG
GATGGGGGAGTTTTTTTTTCACACCCCAACAAAGCGTCAGTCGTGATGCG
TTGTGATCGTATGATCGTAAGTAGTGGCGGAAATGAGTTGGAAAAAGAAA
GGGGGGGGGGGAGAGGATTTCACCACGTGGAACACAAAGGGAAAATAGAG
ATCGGGGGGGGGGTTCTTTTCGAAAACAAGATTTACCCCCAAGGATGAAT
CGATGTTTTGCCAGTTTTTCGGCGACCTCTTTCGGGGGAGGGGGGCATAT
CAAAGCAGATTACAGCAGAATCTCTGTTTTTCGGAGTCCTCGTCGTGTGC
GTTTGTTAAGTTTCTTCGTCGTTCGCATTCAAGCCTTTGCTTTCTATGTG
AGTTCTGTTCGTAGCTCAATTCTTTTTTTCTAAAACCATCGGTTTGTTTG
TTTCTCTCTTGCTTCATGTAGCTTTTTTTTCGGACGGGGTTGATCGAGTG
TCGGGGGAACCCATGTTGTTTCGTGATTTGTGCCGCATAATGTCATTACT
CGAGCGCAAGTGTACTCCCACGAGTTTTTTGTTCTCGTACGTAAAGCAAC
AGGCACCCCCGCGTGATGCTCCTCTAGGTCCTCGTCTAGAGCCAACAACG
AACACATTGATGTCTTTTGTACGAAAACAAAAAAAAAAGTTCATCTTGTT
TAGAGTTTTTTTTACAACAGAGGTGCACATCTCCATGTTTGGTGTCACAC
ACCCCACAGGAGAGTGCGGTAGCAACACTTCTTTGCTCGGATATTCCACA
CCTATTTGTTCCTGGACCTCGGAAGAGGGTGTGGCAGGAGCAATTCTTCT
CTAGCCGTGGAGATACCGCATCCTCTGGTACAGCTGAGTCCAGACGATTG
GCCGTTTTTTTTTTGTCACACCCATAACATAAAGAAAATAAACACTACGC
ACGATGCACGCCCCCGAAAGGATATCATATCACCACACCGTCTGATCACT
TTTTTCGAACACGCCACCACGATGTTATGACCGAGGTCCGAGGTGTGCTG
TCTCATGCCACCTACTACCAAGCGGTAGTGGCCATCAGCGCTCTTTTCCA
ACCTTTCGTCACCCCGAACCCAAGCTCTACACCTCCGCCGAGAAAATATG
CGGCCGGCGATACTCCCTGATACATGTGTTAATTCTCACATAAGCTCACC
ACCCAAAGTCCAGCCCGTGGTCACAAACCCGACACATATCATACCGTGCT
ATCATAGAACGAAAGTATATACATATCTCCAGCAGCTGTGCATACAACAC
TTCGCCACAGTGCAGGGCTGCAACCGATAAAAGGACGTCTCAACGGAGAA
GAAAGTGGACATCGACATCTGCTCAAGAAAAAAAAAAAAAAGGCATCGAG
GGTTTTCGTACAGAGTTCCCACAGAGATCTCCGGTCCGGAGTTGGGCAAG
GTTCTACCAGTCACCGGGGCGGCCTTAACATTCTCTCATGACCGGTACAT
CACTTTCCCCCCCAACACCTGGAAGTCTACATACGTCTATCGCAAAGACA
GGCGGAAGTCATGTTTTTTTTTCAGCAGCGCCGCACGATGAACAAATACA
CAACACTGGCCACTTATGTCTATTTTTCTATGGCACTTTCGGTCAGACAG
GGAGGGGGCGGTGGTGTCTCGGCACAGCAGTGGAAGAGCGCATCGGAGAC
GCACACTCTGTCTTCATTCGTGAACACGGCTCTGTTGCAGAGAGTCAACC
TTCCACCTCGTCTCCCCGCGCCCCTTCGCTTTAATAGACATTCGTACGTT
TCGTGCCATTCGCAGCATTTATTGAACCTGGGGATCATGGGGCTACTATT
GATGACGTTGTTGCTGTTGTTGTTGCTGGTGGTGGTGGTGGTGGTGGTGG
TGGTGGTGGTAATGCGTTCATATTTATCACCGTTCTGACCATCTACCCAG
CACCTCCACATTTCGCACAATCAAAGCCCACTCTCGCTGATAACCCCCCC
CCCCTCCCCCCCCCTCCTCGCCCGCCGGCCCCCCTACACCTACAAATCAT
CCCTCGATATTGGAAACCCACCAACCCAGTCCGGTGTGGTGCTGACGGGG
TTGCCGGCGTACAAGAGGATGTTCGCAACGCTTCGATTCGCGCGGAAGAC
GCTTGTTCACGAGCTTTCGACCGTGTTCCGCCTCTCCTACGACGGCTCTC
GGCAGCAGGTGAACAGGCGCCAAGAGAATACGCGAGCTGTCATATCGTGC
TGTGGTGGTGGTGGTTGTGGTGGTGGTGGCGGCGGCGGCGGTGGCGGTGG
CAGATCTTTGTTTGAATTCCTTACGGTATGATAGTGTAAGCTCGAGCCGA
TAGCCATGAGCACGGTGCGAGCCCATGCCCACGGAATATGTAGGCGCTAC
CATACTTGCTGTGGTACCCTCAGAGGATCAGCGCAGACCCGTGGGGTCGC
CGGGTAGTCAGACCGGTTTTGGACGTGACAACAACCATGGTTAACACGTA
TGTGTGTATGCGTTGTGGTTTGTCATCCCATCTCAACCTGGACACCAGTC
TACGCCTTTCGTTGTAAGTTGGTCGCCACCAGCAGGGGTGTGGTCACACA
GGAGGAATGTCAACGCACTTTTTTTTTTTTTGTCTTTTCTCCAGTTTTTT
TTTCTGCAGCGCATGCCTTAATTTTTTTTATCGTGAACAGGGGTTGGCCG
TGCCTTCCCTCGTCGAGGTTTGAAAAATGCATACCAGGTATATGTTTTGC
GTTCAATATATATACGGAGTAGTAAATATGCGCCAATTTCTTCGACGGTT
CATCATCTTGATTCGTGGGGGTGACGGTCCTTTTTTTTTTTTTTACAACT
TGACCCGGAGCCATGATATGATACAGTGTCTAAACAGCAGCGCGCAATGA
TAGAACGTGTATGATATGATGTGTATGATATGATATCATACCATACCGTG
GATGAAAAAAACACGTACATAAAAACACAGGTGCGCGTAACCTGGCACTT
CATCCTGGACGCGAGCCCGATGGTGGCGAGGCCGATCCACGTGGACGGCA
CGAGCGTGTACAGCCTCAGCAGCAAGGGCTTGGTGAGGCGGCATGAGGTG
GAGACGATCATCGTCAACGGCACTCCTGTCAAGCCGCCCTTCGCGCAGGC
CTGGATGCACCTCCCGCCCTGGGTAACTCAGGGGCTCAACGGAGGCGCCG
CGGGTGCTCCAGGCTTGACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCGGCACCGTGCGCGGCGGATGGAGAAACGTCGGCGGCAGAAGCGG
CGGCCGCTTCGGGAGAGAAGGTAGCGGTAAATTGCGCGACGTCAGCGAGA
GAGCGCCCGCGACGATAGTGAGCGGGCTCGGCGGCACAGCCTTGTCGTTT
CAGGGTGCAGGGGTGGCGGCGGCGGTGGCTGGCAGGAGGAGGCCTAGCGA
ACCGCTGGCAGAAGCCATTGGGAAAGACAGTGCCCGTTTCCGTGTAATCA
GCAGCAGCAGCGTTTGGAAGGCTGCATCGGAGGGCTCGGGAGGCGAGGGG
TCGTCGTTGCCCGCGGCGGGTGGGGAGGAAGAAGGGAGAAGCAGTAGCAG
CACGCACGACGAAGAGGACCGGGGCAGCGGTAAGGGCGAGACAGCAAGCG
AAGAGAGCAAGGTGACGAACACAAGGAAAAAGAAGAAGAAGAAATTCTGG
CCGATAGAATACGATGGCCCGCTAGGTTGCGAGACGAGCTTCGACTGCAC
GGGGGGCTACGTGTGCTGCGATCTGATCGTCATCAAGATCTGCTGCAGCA
ACGGCGTCATGCAGAGGAAGCCCGGGGACCTGATCCCCTCGTTGATACCG
ATCCCTGGAAGGGGGAGGACCGAATTGGACCAGTGCCAGATGGCGCGGTG
ACCATTGACAACGCGCTTTCAAATTCATTCAGGGGTTTATCCCCACACAC
GCTGCTCTGCGAGGTGTGAGGGCGACGCAGGCAACGTTTATTTTGGCGAT
AGACGCCCCATAGACGGGGGGAAAGGGGGGTCAGAGTCCAACATTCGCTT
GTGCGAGGGGACGCACACCCCGTGAGAGATCACGTCGTGCCCGGAATGAG
GTACCAGAGGAATTTCATGTCATTTGACAATCGTGACGATGACGGCACTC
TCACGCCCGGAATGAGGTACCAGAGGAATTCATGTCATTGACAACCGTGA
CGATGACGGCACTCTCACGCGCGTAATATAGTAGAGTTCGTAGTGTAGGG
CCGGCTCGTGCAGATATTTAGTGGTGAGTTCGAAGAATGTAGATCCCACG
ACTACGGCGGTGGATGTATAGTGGCTTACCGTCCACTCTAGGATGGCAGC
TGTTCTTATAAGTATATACAGCAGTAGTTGTGATGAAGGTCGAAAGGTTA
TTCCCAGATGAAATTTTTGTGTTTCGGCAATGAGTGGATATTGTTGCGCT
TTTTTCGCGAGAACAGTGAACGCCTTTGTGGCAGAGGGGCTACGATGCTC
AGCGCTAGGGTTAGGAGTATTAGAATAGACGGAGCCTGGTAGCGGAGGCG
TTTTCGTACCCAAATGGAGCGGTTTGTTGCAGTGACTTTTTCCCCTCAAC
GGTTTTGGCGGGGTTGCCCTCGATTAAACACGGGGGGATATAACACAGGA
GGTGCAAGGATCTCGACACCACCTGATGAAGGAACGATTAGCATCAGCAG
AGGAAAGGCCGCTCTTCTAGAGGCATTTTCACGAGGCCCGGGGAGGGTAT
GATAGCGGTATTTTTCTTATTCCAAGCCTTGTAAAGGTTGATTTCTGTTG
GGGCTGAAAAAATACCACAAAGAAATCTGTCCCGTTTTTTGCATATTTTG
TTCAAGCAACAAATGAAGCGTTTTTCGCATATGTTGTTATGTTCAAGTAA
CAAATGAAGCGTTTTTCGCATGTTATGCGCGGCTAGCACAAAACCGGCTC
CTTGCTGTGGCAGAGGTAACCCAGCAACGCCGCGCGCGGGCGGGGGACAA
GAACAACAAACAAGGTTACGGATTGGAGGCCGCCCTGACCAGGGCAATTT
GTTCTCAACAGCGGCAGCGTTTGGTGAAGTTTGTTCCCCTACATTTTATT
TCCATGGGGGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig682:75638..83798+

>mRNA_P-littoralis_Contig682.13.3 ID=mRNA_P-littoralis_Contig682.13.3|Name=mRNA_P-littoralis_Contig682.13.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1527bp|location=Sequence derived from alignment at P-littoralis_Contig682:75638..83798+ (Pylaiella littoralis U1_48)
ATGGCTCGTTTAGGCAGGCGAAGGGCACTATTGGTGTGCTTGGTAGAACT
AGTGCGCATTCCAGCCGGCGGATGGCTTTCAGCCCATGCCTTCATCAACT
CTGCCAGCAGCAGCAGGCGGAGCAGCAGCAGCGGCGGGGGTAGCAGCGGG
AGACACGACTTTCAACAACAACAGCAGCGGCAGTTGAACCTCACGCCGAC
TGAGGAATGGCGATGGCGAGGCATGATGCGCCGACGACCACGCAGCGTTG
CGATGCAGGCATCCCAAGGTGCATTCCCCTCGTTGGCCAGGATCCCGCTG
CCCCCGGGCGGCGGCATCTATGAAGGCCAAAAGAACGAGAAGGAAAAACG
AGAGGAGGCCGACTTCAACAGGAATGTCGGCAAAGTGGTAGAGACTCTGC
GGGAGAGCTATCAGCACATCTTCGACGAGCCCTTGGACTTCGACATCTAC
ACTCCGGACTTGCAGCTTCGCGATCCGTCCGGTGTGGTGCTGACGGGGTT
GCCGGCGTACAAGAGGATGTTCGCAACGCTTCGATTCGCGCGGAAGACGC
TTGTTCACGAGCTTTCGACCGTGTTCCGCCTCTCCTACGACGGCTCTCGG
CAGCAGGTGCGCGTAACCTGGCACTTCATCCTGGACGCGAGCCCGATGGT
GGCGAGGCCGATCCACGTGGACGGCACGAGCGTGTACAGCCTCAGCAGCA
AGGGCTTGGTGAGGCGGCATGAGGTGGAGACGATCATCGTCAACGGCACT
CCTGTCAAGCCGCCCTTCGCGCAGGCCTGGATGCACCTCCCGCCCTGGGT
AACTCAGGGGCTCAACGGAGGCGCCGCGGGTGCTCCAGGCTTGACAAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCACCGTGCGCGGCGGA
TGGAGAAACGTCGGCGGCAGAAGCGGCGGCCGCTTCGGGAGAGAAGGTAG
CGGTAAATTGCGCGACGTCAGCGAGAGAGCGCCCGCGACGATAGTGAGCG
GGCTCGGCGGCACAGCCTTGTCGTTTCAGGGTGCAGGGGTGGCGGCGGCG
GTGGCTGGCAGGAGGAGGCCTAGCGAACCGCTGGCAGAAGCCATTGGGAA
AGACAGTGCCCGTTTCCGTGTAATCAGCAGCAGCAGCGTTTGGAAGGCTG
CATCGGAGGGCTCGGGAGGCGAGGGGTCGTCGTTGCCCGCGGCGGGTGGG
GAGGAAGAAGGGAGAAGCAGTAGCAGCACGCACGACGAAGAGGACCGGGG
CAGCGGTAAGGGCGAGACAGCAAGCGAAGAGAGCAAGGTGACGAACACAA
GGAAAAAGAAGAAGAAGAAATTCTGGCCGATAGAATACGATGGCCCGCTA
GGTTGCGAGACGAGCTTCGACTGCACGGGGGGCTACGTGTGCTGCGATCT
GATCGTCATCAAGATCTGCTGCAGCAACGGCGTCATGCAGAGGAAGCCCG
GGGACCTGATCCCCTCGTTGATACCGATCCCTGGAAGGGGGAGGACCGAA
TTGGACCAGTGCCAGATGGCGCGGTGA
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