mRNA_P-littoralis_Contig681.6.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig681.6.2
Unique NamemRNA_P-littoralis_Contig681.6.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A6H5KM04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM04_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 4.580e-114
Identity = 214/360 (59.44%), Postives = 244/360 (67.78%), Query Frame = 2 
Query:   20 TLRRKLDVEIMKHAALLITLRLVGSAASPPAAFVNPAATAAASPAFTTNRPEL-GDVSS--------PIAPQGSLQKQRHQQQHEQHSAHGQRNIVVASLGGSATSVAGVLASSTPSVVSWLPTALATIVGVLAGASLVNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGPPVNSFSGPNDS 1066
            T + +L    MK A +L  + LV SA S  AAFV PA   A S AFT NRP L GD SS        P+ P   L +Q  Q+Q  +H        +VASLGG    VA V+ SST  VVSWL       VG L  AS+ N LQG    DLGLTP++ILGVPAEEATA+ V+RLGKAGFMQLFY+S  P  GDLDGEYRARTL+MG+LHPITAIITHRIWGPGRWLGKGIR+GS EGYNLF+                          +GLPSDT+R+R FRFS  S SVFDRG SS+L+YA+AG KNGPLFGGMRDEVRKVND+LF+GLGYIQAFGGKYN+APFVMEGPPV  FS P+ S
Sbjct:   29 TFQPRLKQGSMKRAFVLTVVPLVSSA-SLAAAFVCPAPATATSAAFTPNRPRLAGDASSSSASATIAPLRPARDLHRQ--QRQRGRH--------LVASLGGGVPEVAAVVISSTSYVVSWL-------VGTLVAASIANFLQGRPYSDLGLTPDKILGVPAEEATADHVARLGKAGFMQLFYASQCPVTGDLDGEYRARTLNMGVLHPITAIITHRIWGPGRWLGKGIRTGSREGYNLFAS---------------------ESKGIGLPSDTQRERCFRFSQSSDSVFDRGVSSELDYARAG-KNGPLFGGMRDEVRKVNDKLFIGLGYIQAFGGKYNSAPFVMEGPPVGEFSSPDKS 348
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BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: D7FZY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY5_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 4.430e-98
Identity = 193/322 (59.94%), Postives = 217/322 (67.39%), Query Frame = 2 
Query:   50 MKHAALLITLRLVGSAASPPAAFVNPAATAAASPAFTTNRPEL-GDVSSPIAPQGSLQKQRHQQQHEQHSAHGQRNIVVASLGGSATSVAGVLASSTPSVVSWLPTALATIVGVLAGASLVNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYN 1006
            MK A +L  L LV SA S  AAFV PA   A S AFT NRP L GD S+                       G+   +VASLGG    VA V+ SST SVVSWL       VG L  AS+ N LQG    DLGLTP++ILGVPAEEATA+ V+RLGKAGFMQLFY+S  PA GDLDGEYRARTL+MG+LHPITAIITHRIWGPGRWLGKGIR+GS EGYNLF+ G E +                    +GLPSDT+R+R FRFS +S SVFDRG SS L+YA+AG KNGPLFGGMRDEVRKVND+LF+GLGYIQAFG   N
Sbjct:    1 MKRAFVLTVLPLVSSA-SLAAAFVCPAPATATSAAFTPNRPRLAGDTSASSXXXXXXXXXXXXXXXXXXXQRGRH--LVASLGGGVPEVAAVVVSSTSSVVSWL-------VGALVAASIANFLQGRPYRDLGLTPDKILGVPAEEATADHVARLGKAGFMQLFYASQCPATGDLDGEYRARTLNMGVLHPITAIITHRIWGPGRWLGKGIRTGSREGYNLFT-GSEAKG-------------------IGLPSDTQRERSFRFSQFSDSVFDRGVSSGLDYARAG-KNGPLFGGMRDEVRKVNDKLFIGLGYIQAFGDTGN 291
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BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A5K7Z8H1_9DELT (Uncharacterized protein n=1 Tax=Desulfosarcina widdelii TaxID=947919 RepID=A0A5K7Z8H1_9DELT)

HSP 1 Score: 138 bits (348), Expect = 1.470e-31
Identity = 92/224 (41.07%), Postives = 123/224 (54.91%), Query Frame = 2 
Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSE---GYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGPPVNSFSGPND 1063
            +N LQ G  G  G + EQILGVP E+AT  D+ RL K+  MQLF+S+  P   DL GEY+A+ L +GI+ P     T   +GPGRWLGKG  + +++   GYNLF    EK                      G    TRR +    +    SVFDR  S KL+Y+   +  GP+ G MRDE+RK+N  LF+G+GY+   GG  N  PFV+ G P + + GP+D
Sbjct:  306 INILQNGSSGWDGRSMEQILGVPPEQATLADIERLSKSEVMQLFHSATPPTLSDLQGEYQAKNLAVGIMAPAADFYTQHFFGPGRWLGKGFTAEAAQNGQGYNLFQ---EKEGD-------------------GTIWRTRRMK----TSVGTSVFDRKESFKLDYSVYNK--GPVHG-MRDELRKINPALFIGMGYMPIGGGSINPGPFVVYGNP-SPWVGPSD 499
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BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A7C1GQ52_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C1GQ52_9DELT)

HSP 1 Score: 123 bits (309), Expect = 1.180e-28
Identity = 79/219 (36.07%), Postives = 112/219 (51.14%), Query Frame = 2 
Query:  401 SLVNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSSPAA--GDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSE---GYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPY-SPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGPPV 1039
            +++N LQ G+ G  G + E+ILG+  E+AT +D+ RL KA  MQLF+++PA     ++GEYRA  L +GIL P  A  TH  +G G W GK       +   GYN+FS    K+ T                            R  +F+ Y  PS  DR  +  L+Y+     N  +   M DEVR++ND LF+ +G++   GG  N APFV+ GPP 
Sbjct:   22 TIINILQNGLGGYKGRSVEEILGISPEKATLKDIQRLTKAQVMQLFHAAPAPDFASMNGEYRAELLPLGILAPSAAFYTHHFFGSGHWEGKAFFPFEDQRGWGYNIFS----KKGTL--------------------------SRMRKFNSYCGPSTIDRKPAFHLDYSP---HNSGIVHSMHDEVRQINDHLFICMGHMALGGGAVNPAPFVLMGPPT 207
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BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A2N1TA87_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetae bacterium HGW-Spirochaetae-1 TaxID=2013832 RepID=A0A2N1TA87_9SPIR)

HSP 1 Score: 122 bits (307), Expect = 2.540e-28
Identity = 83/228 (36.40%), Postives = 117/228 (51.32%), Query Frame = 2 
Query:  377 IVGVLAGASL----VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSSPAA--GDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGI---RSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPY-SPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEG 1030
            ++GV+ G ++    VN LQ G+ G  G T +QILGV AE+AT  D+ +L K+  MQLFY++PA   G + GEY+A+T+ +G++       TH  +GPG W GK           GYNLF+                        SD      TR  R  + + +   S  D   S  L+Y+     NG L   M DEVRK+NDRLF+ +G++ A GG  N APF++ G
Sbjct:   10 VIGVIVGLNVLVTGVNILQNGIGGWDGRTVDQILGVSAEKATPADIEKLSKSEVMQLFYAAPAPAFGTMKGEYKAKTISVGVMAASADYFTHHFFGPGHWEGKAFFPFEKDKGWGYNLFT---------------------VKNSD----GTTRIARTRKMNNWVGKSTMDDRDSFHLDYSPY---NGGLVKSMHDEVRKINDRLFICMGHMAAGGGAINPAPFILYG 209
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BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A2N2F743_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-9 TaxID=2013759 RepID=A0A2N2F743_9DELT)

HSP 1 Score: 121 bits (303), Expect = 5.920e-28
Identity = 80/214 (37.38%), Postives = 106/214 (49.53%), Query Frame = 2 
Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGI---RSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGP 1033
            +N LQ G + D G + E+ILGV  E+AT  D+ +LGKA   QL+Y++  P+  D +GEY A TLD+GI+       TH  +GPGRW GK           GYN+F     K                   +++GL                 S  D   + KLNY   G  N      MRDE+RK+ND LF+GLGY+   GGK N APF++ GP
Sbjct:   13 INILQKGGKYD-GRSMEKILGVAPEKATINDIKKLGKAEVFQLYYAATAPSFQDFNGEYTAATLDVGIMATSAEYYTHHFFGPGRWEGKAFYPFEKNKGYGYNIFKDATGKT-----------YRTRKMDTEIGL-----------------SDHDGKPAFKLNY---GAYNSGTVNSMRDELRKINDNLFIGLGYMALGGGKINPAPFLVIGP 194
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BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A847ZAA1_9DELT (Uncharacterized protein n=1 Tax=Smithella sp. TaxID=2053614 RepID=A0A847ZAA1_9DELT)

HSP 1 Score: 121 bits (303), Expect = 7.920e-28
Identity = 81/214 (37.85%), Postives = 110/214 (51.40%), Query Frame = 2 
Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFY--SSPAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIR-SGSSEGY--NLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGP 1033
            +N LQ G   D G + E+ILGV  ++AT ED+ +L KA   QL+Y  S+P+  +  GE+ A T+D+GIL    A  TH  +GPGRW GK    +G + GY  NLF   G K                   +++G                 PS +D   + KL+Y   G  N      MRDE+R++NDRLF+GLGY+   GGK N APF + GP
Sbjct:   24 INILQKGGAWD-GRSMEEILGVAPQKATLEDIRKLNKAEIFQLYYAASAPSFQEFKGEFAAVTVDVGILASGAAYFTHHFFGPGRWEGKAFNPTGENRGYGYNLFQDAGGK-----------IYRTRRMDTEIG-----------------PSDYDGKPAFKLHY---GAYNSGTVHSMRDEIRRINDRLFLGLGYMALGGGKINPAPFALVGP 205
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BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A3N5IIR5_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3N5IIR5_9DELT)

HSP 1 Score: 114 bits (286), Expect = 1.680e-25
Identity = 77/214 (35.98%), Postives = 105/214 (49.07%), Query Frame = 2 
Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFY--SSPAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKG---IRSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGP 1033
            +N LQ G + D G + E+ILGV  E+AT +D+ +L KA   QLFY  S P+  +L GEY A T+D+GI+       TH  +GPGRW GK    I      GYN+F     K                   +++GL                 S  D   + K+NY+     N      MRDE+RK+N+ LF+G+GY+   GG  N APFV+ GP
Sbjct:   24 INILQKGGKYD-GRSMEKILGVLPEKATIDDIKKLSKAEVFQLFYAASEPSFQELKGEYIAATIDVGIMATSAGYYTHHFFGPGRWEGKAFNPIEKDKGYGYNIFKDAEGK-----------IYRTRKMDTEIGL-----------------STQDGKPAFKINYSAY---NSGTVHSMRDEIRKINNHLFIGIGYMGLGGGSINPAPFVLIGP 205
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BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A7S2UWI1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWI1_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.630e-25
Identity = 77/218 (35.32%), Postives = 110/218 (50.46%), Query Frame = 2 
Query:  389 LAGASLVNALQGGVRGD-LGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSSPAA---GDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPS-DTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVME 1027
            LAGA++ N  QGG  G  LG + E+ILG P ++A+  D+ +L K  FMQLFY+SP     G + G +  + L +G+LH +T  IT  ++G G+W GK +   S  G NLF+                        S + +   DT  D          S++D       +Y     KN   +  MRDEVRKVND+L +GLG +  FGG  N+A FV++
Sbjct:   67 LAGATVCNIFQGGRPGHYLGQSQEEILGCPPKQASVADLEKLSKFEFMQLFYASPMVVLDGSVQGNWEGKILPIGVLHLVTKFITDYLFGAGKWCGKAVDPSSCTGINLFAQ---------------------DKSAISMREFDTCIDC---------SLYDGRPILLFSYKS---KNLFPYNTMRDEVRKVNDKLLIGLGSMSVFGGHLNSASFVLK 251
[Close]
BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A3A4Q0Y7_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4Q0Y7_9DELT)

HSP 1 Score: 110 bits (276), Expect = 5.170e-24
Identity = 79/225 (35.11%), Postives = 112/225 (49.78%), Query Frame = 2 
Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGR------WLGKGIR---SGSSEGYNLFS---PGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASS-KLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGPP 1036
            +N LQ G +   G T  QILGV  E A  +DV +L +   MQLFY++  P    L+GEY A+ L  GIL P +A+ TH ++  GR      W+GKG +     S +GYNLF+   PGG                           ++T R RP + +     V   G  S +++Y+     N  +   MRDE+R++N+ LF+G GY+   GG  N APF + GPP
Sbjct:   24 INILQAGPKIPDGRTMAQILGVAPETAVFDDVEKLSRKDKMQLFYAANTPDIRALNGEYEAKLLSGGILGPSSALFTHHVFPTGRVTPRTRWVGKGFKPNDENSGKGYNLFTRKKPGGT--------------------------AETLRIRPMKTALAVSKVGKDGKRSFQVDYSA---DNTGMIHSMRDEIRQINENLFIGAGYMALGGGPINPAPFALIGPP 219
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KM04_9PHAE4.580e-11459.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZY5_ECTSI4.430e-9859.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5K7Z8H1_9DELT1.470e-3141.07Uncharacterized protein n=1 Tax=Desulfosarcina wid... [more]
A0A7C1GQ52_9DELT1.180e-2836.07Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A2N1TA87_9SPIR2.540e-2836.40Uncharacterized protein n=1 Tax=Spirochaetae bacte... [more]
A0A2N2F743_9DELT5.920e-2837.38Uncharacterized protein (Fragment) n=1 Tax=Deltapr... [more]
A0A847ZAA1_9DELT7.920e-2837.85Uncharacterized protein n=1 Tax=Smithella sp. TaxI... [more]
A0A3N5IIR5_9DELT1.680e-2535.98Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A7S2UWI1_9STRA6.630e-2535.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A3A4Q0Y7_9DELT5.170e-2435.11Uncharacterized protein n=1 Tax=Desulfobacteraceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig681contigP-littoralis_Contig681:30588..37006 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FZY5
Model size1754
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons4
Evalue6.21e-102
EggNOG OGs2EAKV@1|root,2SGUA@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-22_003620.1
Cds size1023
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig681.6.2prot_P-littoralis_Contig681.6.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig681 30637..36324 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791417.3014436-UTR-P-littoralis_Contig681:30587..306361680791417.3014436-UTR-P-littoralis_Contig681:30587..30636Pylaiella littoralis U1_48UTRP-littoralis_Contig681 30588..30636 +
1680791417.3603497-UTR-P-littoralis_Contig681:36324..370061680791417.3603497-UTR-P-littoralis_Contig681:36324..37006Pylaiella littoralis U1_48UTRP-littoralis_Contig681 36325..37006 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791417.314279-CDS-P-littoralis_Contig681:30636..310991680791417.314279-CDS-P-littoralis_Contig681:30636..31099Pylaiella littoralis U1_48CDSP-littoralis_Contig681 30637..31099 +
1680791417.327033-CDS-P-littoralis_Contig681:34285..344181680791417.327033-CDS-P-littoralis_Contig681:34285..34418Pylaiella littoralis U1_48CDSP-littoralis_Contig681 34286..34418 +
1680791417.3375046-CDS-P-littoralis_Contig681:35130..354221680791417.3375046-CDS-P-littoralis_Contig681:35130..35422Pylaiella littoralis U1_48CDSP-littoralis_Contig681 35131..35422 +
1680791417.3511062-CDS-P-littoralis_Contig681:36189..363241680791417.3511062-CDS-P-littoralis_Contig681:36189..36324Pylaiella littoralis U1_48CDSP-littoralis_Contig681 36190..36324 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig681.6.2

>prot_P-littoralis_Contig681.6.2 ID=prot_P-littoralis_Contig681.6.2|Name=mRNA_P-littoralis_Contig681.6.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=341bp
MKHAALLITLRLVGSAASPPAAFVNPAATAAASPAFTTNRPELGDVSSPI
APQGSLQKQRHQQQHEQHSAHGQRNIVVASLGGSATSVAGVLASSTPSVV
SWLPTALATIVGVLAGASLVNALQGGVRGDLGLTPEQILGVPAEEATAED
VSRLGKAGFMQLFYSSPAAGDLDGEYRARTLDMGILHPITAIITHRIWGP
GRWLGKGIRSGSSEGYNLFSPGGEKRNTPPSKEDGGGGGGGGGGSDVGLP
SDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKV
NDRLFVGLGYIQAFGGKYNTAPFVMEGPPVNSFSGPNDSN*
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mRNA from alignment at P-littoralis_Contig681:30588..37006+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig681.6.2 ID=mRNA_P-littoralis_Contig681.6.2|Name=mRNA_P-littoralis_Contig681.6.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6419bp|location=Sequence derived from alignment at P-littoralis_Contig681:30588..37006+ (Pylaiella littoralis U1_48)
ATCATTGCTACGGGAGTAAACTCTCCGCCGAAAACTCGACGTGGAGATCA
TGAAGCATGCTGCCCTCCTCATCACTCTTCGGCTCGTGGGTTCTGCTGCG
TCACCGCCAGCAGCGTTCGTCAATCCTGCAGCAACAGCAGCAGCATCACC
GGCCTTCACAACGAACAGACCGGAGTTGGGTGACGTGTCCTCTCCTATTG
CGCCGCAAGGATCTTTGCAGAAGCAGCGGCATCAGCAGCAGCATGAGCAA
CACAGCGCGCATGGGCAGAGAAATATTGTCGTGGCTTCCTTGGGTGGGAG
TGCTACATCCGTCGCCGGTGTCTTGGCGTCATCGACGCCGTCCGTTGTGT
CCTGGTTACCGACTGCACTCGCTACGATCGTCGGTGTTCTCGCGGGGGCA
AGCTTGGTGAACGCCCTACAGGGCGGAGTTCGAGGCGACCTTGGATTGAC
CCCAGAACAGATCCTGGGAGTGCCAGCAGAAGAGGCAACCGCGGAAGACG
TCTCTAGGCTGGGTACGTGGTGCTTGTTAGCTGGTTCGCTTGTGATGTCG
CACGAAGTTTTTCGTGTGTGTGCGTAGAAAGTGTGGGTAGGAGTCGGCAT
TGGTTCGACGAGAGGCTGATTGCTTCACTGATGTCGAAGTTCCAGCTTGT
TTCACTCGAACTTCTCCGGAGGTTCAACATGCACACAGCATTCGTCCCTC
GGTTCCACACGGAGAAGTTGTCCCTGTTCACGGCGATATCGACGTGACCT
TCCTCGCAATCATCGTTCTAACGCACAGGGTGGGGGGGGGGGGGGCTGCG
AGTGTTGCGCTGTTGTTGTGGTCGGGAGCACACGTTACAAACACAAGAGT
GGGCGTTTTCGCGAAACAACGCCCAAGATACCGTCATACTGGTATAAATT
TCCTACCACATGTTTTTCCCACAGGGAGTTGAGCAATGCATTCGTCGCTC
TCAAGACGAGGAACTGGAGTAGAGTTGCAACGATGACAAGGAGCAGTGCT
GCTTTACAACCCCGTACTCGTAGCGCACAAATAAAAAACAATGAAGCAAA
GCATTTTATCAGATGGTGAACAAAAGTGAGCTGATAAAAGTCGCAGCAAT
CGAAAATGGGAAACTGTGACAAAAAAATTGTGGCGGCCTCGTGCAGTCTT
TATGCATACAGCAGTAGGATGGTTTTAGGAGGCAGGCGGTTAACCGTTTA
CCCGATGGCTGAGTATGCTGCTCCTTCTCATTTGTCGTCGACTGGGTTGA
AAGTCGTGGGTTCGGATTCCAGAGTGCCCACTTCTTTTTCAGAAAGACCT
GTTCGTCAAAAGAAACACTCAATGAGGGCCCGGCTATGTATGTACAAAAA
AAGGGGAAACGACACAACAGGGTGCACACATGGGTGGAAAAAGCATCTGG
TTGTTCCAGGGAAGTCGGCCCTGATCACTTACCATCCAGGTGTCAGTGCC
GGAGAGTGTTGAGAGGTGTAGTCCCCACTCGGGTAACCGGCTATCCCTCT
TCCCGATGGCTGAGGAAGCTACTCCTTCACAGTGGGCTGTATCTCACACA
AAAGTCGTGTTTTCCTGTCGAAAATTTCGTAGTTCCGATCCGGCATACTG
TAGAACATGTCGTGCGTATGGAGATTTTCGATCGGCCGTTCTTGTGCCGA
TCGAGCGTTTTTTTTTTTGTTAGGTTGGTTGTGGAGCCGGTTGCAGAAAG
CTTTTCTTCTTGAAGAAGACTACGATGTAGCAGGAGCAGCAGCAACAGCA
GCAGGGTAGACTTTCGAGCGATGAGGCCAGTTTGCATTTTTGCTCATCCG
ACAACTCTCCAACGAAGGAAGCCACAGTCATGACAAAGCCATCCCCCGTG
AGCTGTGTGTTTGGTCCCTACTGTGTGGTGATCGTTTGTTTGGCACCTGA
AGGCGTCGCTAGGCCCGCGAACAAGTTGTTGATGATGTCAAACGAATCCG
AAAAAGAAAGGCGAAAAAGACCTGCCGCCGCTCCGCGCAAGTCTTTTTCA
CTCTCGAACGGATACAGCCACACCAATGACAGAGACATCTTCCACGAGCT
GGCTGAATGGCCCTCTTTTTAGTGGGGATGACTTGGGTTAGGGTTACACA
TGTACGTCGCAAAAAAAAGGCTGCTCGTGTTCACCACATGTGAAACTGGT
AAGAAAGACCTACCGTTCGGTGCTGCTGTACAGCTCTCTCTACTCTCTCT
CTCCCTCTCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCTCT
GCGTTTTTTTACACAATGCGATTGCCATGGGCATGATTTTTTTGCGAGTC
TACCGACGCTTCGCTGCCCCAAACGATCACCACACGGGAAAGACTATGTA
TGCGCTCACGGCAGACGCCTCTCCCATTTCTGTGGCTTCGTCAATTAGAG
AATCGCGAACGAAAATTCAAACCAGTGACATCGCAAAATGAGTGTACAAA
CTTAAAAAGCAATCGGCTGCTAGATGCGAAGTACCAGGCATTTAGCTACA
CGCTGTTGATGGTGCTGCTGGTGCTGAAGTTGGTTGCTGTTGCTGATAAA
CATGGAACGATGTGACGGCACACAAAGACAGACAGCCGACACATGCATGT
ACAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAACTCTCCCCATCTGCTA
CTGTTCTTCTTGCTTTTGGGTCCGTTACCTGTGGCTTGATGTGTGTGTTG
TGGTTTTGTTTGCGATACACGCACAGAGAAAAGATAGAAGCAAAGCCTTT
TCGATCGCAAGAATCAATCGGCCACCGTGTCGCGAAACCCTGAGATCTCC
GACAGGATTCTCATCGAAAACTTGCCGTCGGAAATCTCAGATCGAAAAAT
GGGTCACTTTCAATTTCGTAGGAGACCCCCGTATTACTCTGTGTCGGAAA
TGGGTAACTTTCAAGAGGAATTTTCGACCGCGTAAGAAACAAACAGGCCG
TGAGAGACGTTTTTTGCATGCAAAGCTCCTTCCTGGAGGCCACTCCACGG
GAGGTACTATACGCACACTTGAGTGTTGAAATGATTCAAGAAAAAAATGT
CATCACGGTTTTCCAGGCCAGACTGTACGGATACTCCTCCGTAAGCAATG
CAAAACATTCACCATCTCTCCATTTCCCGATTCCTGTGTACGGGAGGCGT
CCACGATCTTATTTTAGACTCTTTTCATACAAATGTTTTTCAATTGATAA
ACTCTACGGAATGTATCACCCCCCCCTGGTTGGATGTCAATGCCCGATTA
CCGATTGCAAGTCAAGAAGATCGCGCCAAAATCCAAACGATACGGTTTCA
GGAGGCCCTTAAGAGAAAGACAATCTAACGACACCGTTTTCACGCACCGG
CACTCTGTTAGCTGTAGAGATCGATCGCCCTGTCTTCGCGCCGGAAAAAA
AGGATCGTTTCGTATGATATAATATCATATGCAACCAACACACACACACA
TATGAGAGGTCACGCCGCAGCAGTGGCTTGCTCTGCAGCGTTGCATCTCA
AGTTAAGGTGCGTTTGACACGATCGCTATGATATGATAGGCCAATGCGGG
ACACTCCCAAACCAGGATCCGGCTGACGACTGGCGTCCCCACGCTGTTGA
TTGACATTTCTCCCCCCCCCCCCCCTTTCCCCATGGTTTGAATGATGTTC
CTTGTTCGGGCGCGTGTGGCTGAACTTGTGCTTCCCATGCATGACAAGGC
AAGGCGGGGTTCATGCAGCTATTTTACTCGAGCCCAGCGGCGGGAGACCT
GGACGGGGAGTACCGCGCCCGCACGCTTGACATGGGCATCTTGCACCCGA
TCACTGCCATCATCACGCACCGAATATGGGGGTGAGACTGAGATGCCGTA
TCATATTATAGCATATGTGTGTACAACTGCGTGAGTCTTGTTTTAAGAGA
GGCACGAGCAGGTTGGCGTCGCCGCTCCACAAGTTTGCTGCCAAGGAGCG
GCTTTGTGTTGTTGGGTGGGTATCATAAGAGAGGGACCAAGATTAGGCAA
GGTGTGTTTTCAGGCGGGCATTTTCCTTCCTTAAACTGTACTTCGAAGTA
CTATTTTCTCAAAACCTCCCCTGGTGTGTGTTATCGCAACGCCAACCCAT
CCTACGCAGGCCGAAGGCTATGAAAGGAGCGTGTAGGTAAAAGAGAACAC
AACCGCCTGAATGTGTGTGCCTGTAGTTTACCTGAAACATGTTGCATATC
GAAAAACGGAAATTTGAAACATTTCGTCCACTACGCCGTGCATTCGCTCG
CAACGCCAGTAAAACAGAGGCCGTATTACATGCCTCTTTTCGAAATCGGT
CTATGTTTTGGTCGTGAGTCCATTGACCAATCGACCCGCGAGCCGCCATT
TGTCCTCTTCGACGGCCACTGCTGGGTGCGTAGACGACGGTAATAACAAA
ACGTGCGGTACTTCTTCCGGAGCAAGCAAGCGAGGCCTTCTGTCTGTCTT
GTGTGGCCGGACGGCATCCACTTTCCGCTCGCTTTCGTGCCGACCTACCT
GCACCCCCGTTCCCGGCCTTGAATGTACCCACCCCATCCCCAGGCCAGGA
AGGTGGCTCGGCAAAGGCATCCGTTCGGGGAGCTCGGAGGGGTACAACCT
CTTCTCTCCCGGGGGCGAGAAGAGGAACACGCCTCCGTCGAAGGAGGACG
GTGGTGGTGGCGGCGGCGGCGGTGGTGGTAGTGACGTTGGTCTTCCGAGC
GACACTCGGAGAGATCGGCCTTTCCGGTTCTCCCCGTACTCGCCGAGCGT
GTTCGACCGAGGGGCCTCGTCGAAGCTCAACTACGCGAAGGCGGGTGAGA
AGAACGGACCGCTCTTTGGCGGCATGCGCGACGAGGTGAGAAACTTGTCG
GTGGTGGTGATGATGATGATGGTTATGATGGTTCTCGCGGGATTATATGT
ATCATATGATCACTGATCGCCAAAATCTACAACAGTCGGTCAAGCGCCGG
GCATAGAGCGTCTCTCCTTGTGCGATCCATACGATGCACGGCACAAAGGT
AGCCAACGAAGAGCTGGCTTCGACAAGCCGACACACAGGTTGGGTCGGCA
AAAAATATTTTCTTTGTGCGTCCGATGAAGTTCTTTTTGGTGAGCCGGTT
GTCGTAGTCAAAGGGCGAGGGAAAGGGTTGACTCAAGTCCTTACTCGCCG
AGCTGGCCGAAAGAGAAACGTGGCGTCCCGTCACATACAGTGCCCCCTCG
CGTAGGGTTCCCGTAGGATCAGCATCGAGTGCCGGATAACCCAGACATGT
TTGTTTTCCGTGTTCCGTACCTGCAAGCGGGGCGGGAAGGGGTGGTGGAC
ACGAATGTCTTGTCACCAAGCGCTCCTGGGCTCTCGAGGGACGCGTACGG
AACGCACCGCCACTCGAAAAACGATTCGCTTGCGTTCTAGATGCCAACAT
AAACGGTGTGGCGTGGTTCGCGGTAACCAGCAGACTTTTGCTGAACGGGT
GCCAAGTCTTGCCTTGTTCGTGCTGGTTTTTCCTCCACTTTTCCTGTGTT
TTTCCCAACACGGTTTCTAGCCTTGCCTTGTCCGTTTTGATTTTTCCTGA
ATGTTTCCTGGATTTTCCCTCTCTCTCTCTTTTTTTTTTCTCACGTTCTC
AGGTTAGGAAAGTGAACGACCGGCTTTTCGTGGGATTGGGCTACATCCAG
GCCTTTGGCGGCAAGTACAACACGGCTCCGTTCGTCATGGAAGGTCCGCC
CGTGAACAGCTTCTCCGGGCCCAACGACAGCAACTAGTGTTGCCCCCCCC
CCGCCTCGCAATGAAACAACGGGGTTTGATTCTCCATGCTGCTTGCTCGA
AGGTGTCCATATAAAAAAAAAAGTGTGGCATATAGAGAGCACGGGATGAG
TTGTTTACTATTGGTGTCCATGAAACAATAGGGTGGAATACGTATCCTCT
AAGCACATATAGGGAGGACGGACGGGATGGATAGAGGCTATTCTTTTGTT
TCGGGCTCGTTGGCATGACACACAAAAAAAGGATCAGGGAGATCAGGGTT
TCGAAACATGCGGCAAAAGTTGGTGGGAGTCATGGGCTACAGTAGATACC
TGGTATTATACAAAGGGTGCGTCATCGTCTGGTTCTGTTTCGCTGCGGTG
CCTTGGTTGTGTTGATTTGGTTTATCCTCGTGGACGACGAAAACAGGTCG
TCTTGTCTTGTGCCCTTGTCGAGTGTTGGTTTTCCACGTGACCACGGAAA
GCAAGTCGTCTCGTCCTGCACCTTACGAAGTAGTTGCGTTGGTTATAACC
CGACCATGAACGGAGTCGTCTGGTCTTATTGCCTTTGTCAGAATTGGGTC
ACCCCATGACCTTGTTTGTGCCAGTTTACCCCCCCATGACCACGGAGGGG
AGGACACTGTGCCCCCACGAAGGGGTCGAAAAGGAAAAGTAAAAAAGTGG
TTCGTTTCGTTAACAGGGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig681:30588..37006+

>mRNA_P-littoralis_Contig681.6.2 ID=mRNA_P-littoralis_Contig681.6.2|Name=mRNA_P-littoralis_Contig681.6.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1023bp|location=Sequence derived from alignment at P-littoralis_Contig681:30588..37006+ (Pylaiella littoralis U1_48)
ATGAAGCATGCTGCCCTCCTCATCACTCTTCGGCTCGTGGGTTCTGCTGC
GTCACCGCCAGCAGCGTTCGTCAATCCTGCAGCAACAGCAGCAGCATCAC
CGGCCTTCACAACGAACAGACCGGAGTTGGGTGACGTGTCCTCTCCTATT
GCGCCGCAAGGATCTTTGCAGAAGCAGCGGCATCAGCAGCAGCATGAGCA
ACACAGCGCGCATGGGCAGAGAAATATTGTCGTGGCTTCCTTGGGTGGGA
GTGCTACATCCGTCGCCGGTGTCTTGGCGTCATCGACGCCGTCCGTTGTG
TCCTGGTTACCGACTGCACTCGCTACGATCGTCGGTGTTCTCGCGGGGGC
AAGCTTGGTGAACGCCCTACAGGGCGGAGTTCGAGGCGACCTTGGATTGA
CCCCAGAACAGATCCTGGGAGTGCCAGCAGAAGAGGCAACCGCGGAAGAC
GTCTCTAGGCTGGGCAAGGCGGGGTTCATGCAGCTATTTTACTCGAGCCC
AGCGGCGGGAGACCTGGACGGGGAGTACCGCGCCCGCACGCTTGACATGG
GCATCTTGCACCCGATCACTGCCATCATCACGCACCGAATATGGGGGCCA
GGAAGGTGGCTCGGCAAAGGCATCCGTTCGGGGAGCTCGGAGGGGTACAA
CCTCTTCTCTCCCGGGGGCGAGAAGAGGAACACGCCTCCGTCGAAGGAGG
ACGGTGGTGGTGGCGGCGGCGGCGGTGGTGGTAGTGACGTTGGTCTTCCG
AGCGACACTCGGAGAGATCGGCCTTTCCGGTTCTCCCCGTACTCGCCGAG
CGTGTTCGACCGAGGGGCCTCGTCGAAGCTCAACTACGCGAAGGCGGGTG
AGAAGAACGGACCGCTCTTTGGCGGCATGCGCGACGAGGTTAGGAAAGTG
AACGACCGGCTTTTCGTGGGATTGGGCTACATCCAGGCCTTTGGCGGCAA
GTACAACACGGCTCCGTTCGTCATGGAAGGTCCGCCCGTGAACAGCTTCT
CCGGGCCCAACGACAGCAACTAG
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