mRNA_P-littoralis_Contig680.42.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: D8LFD7_ECTSI (Fructose-2,6-bisphosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFD7_ECTSI) HSP 1 Score: 268 bits (686), Expect = 2.930e-78 Identity = 138/204 (67.65%), Postives = 164/204 (80.39%), Query Frame = 3
Query: 3 TAMRVAENNDACVRRAQENGLVPSSASPSSSFSPSLAAADMASTSTTGKASSSKEKE-EKPTRADFCCGDKAQVRVRRVEGLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFDRAAKDGESLIEVEARSRAAVDAVLDQGKELNLIVSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYIVEVRRSGPEGARSYRLLPS 611
TAMR+AENN+ C++ AQEN VP ++S+KE+E EK T ADFCCGDKAQVRVRR+EGLDELSWGELEG+D K+EPF+ LAALK+AWD+G+FDRAA+ GE+L+EV+AR+RAAV+ +LD+GKELNL+VSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYI+EVRRSGP ARSYRLLP+
Sbjct: 223 TAMRIAENNEMCLKLAQENDPVPP----------------------VPPSTSTKEQEGEKTTPADFCCGDKAQVRVRRLEGLDELSWGELEGEDSKLEPFKGCLAALKEAWDEGVFDRAAEGGENLVEVQARARAAVETILDRGKELNLVVSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYILEVRRSGPAAARSYRLLPA 404
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: A0A835YVR7_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVR7_9STRA) HSP 1 Score: 104 bits (259), Expect = 3.880e-22 Identity = 52/114 (45.61%), Postives = 72/114 (63.16%), Query Frame = 3
Query: 225 VRRVEGLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFDRAAKDGESLIEVEARSRAAVDAVLDQGKELNLIVSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYIVEVR 566
V ++EGLDELSWG +EG+ +EP ++ L L AW G + AA+ GES V RS++A+ VL G NL+V+HGRT+RIL+L L GL + M G +PN G Y+ V+
Sbjct: 21 VLQLEGLDELSWGWMEGEPKDLEPVKTPLKQLLGAWASGNYTAAAEGGESAQAVFDRSQSALSQVLKHGHRHNLVVTHGRTMRILLLGLAGLPISDMDAFGSVPNTGVYVFAVK 134
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: A0A7S2UWM8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWM8_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.860e-18 Identity = 48/131 (36.64%), Postives = 78/131 (59.54%), Query Frame = 3
Query: 222 RVRRVEGLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFDRAAKDGESLIEVEARSRAAVDAVLDQGKELNLIVSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYIVEVRRSGPEGARSYRLLPSC 614
++ E +ELSWG +EG+ +K EP+++ L +K+ WD G D + GES ++V RS A+D VL +G + N+IVSHGRT+R+++ SL G ++ K+PN YI++ P+ + + P C
Sbjct: 201 QIPSYEDFEELSWGIMEGKSWKEEPYRTMLQEVKKQWDSGNLDASILGGESQLQVRKRSLQALDTVLSKGHKHNIIVSHGRTIRVMLNSLIGKTLE------KVPNTAIYIIQYN---PQEKKFCLVKPGC 322
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: A0A7S3Y0U4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0U4_HETAK) HSP 1 Score: 84.0 bits (206), Expect = 5.560e-14 Identity = 49/127 (38.58%), Postives = 70/127 (55.12%), Query Frame = 3
Query: 225 VRRVEGLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFDRAAKDGESLIEVEARSRAAVDAVLDQGKEL-------NLIVSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYIVEVRRSGPEG 584
+ + L+ELSWGELEGQ + EP++S+ Q W +G D A +GES EV AR+R A++A++ Q +L+VSHGRT+R L+ L G+ M+ +PNCG Y G G
Sbjct: 165 IAQYVDLEELSWGELEGQCAREEPWRSKFKHTVQMWREGKNDYKAVNGESPNEVAARARGALEAIVAQXXXXXXXXXXRHLVVSHGRTIRSLLDGLAGVRMES------VPNCGLYCFAWGGGGGRG 285
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: A0A5E8A8D9_9BACT (Histidine phosphatase family protein n=1 Tax=Imperialibacter sp. EC-SDR9 TaxID=2038371 RepID=A0A5E8A8D9_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 1.130e-8 Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 3
Query: 231 RVEGLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFDRAAKDGESLIEVEARSRAAVDAVLDQGKELN-LIVSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYI 554
++EGLDE+SWG EG ++ + L L +AW G D+ GES IEV R + A++ +L + E LI HGR +RIL+ + G + M + G N G Y+
Sbjct: 76 KLEGLDEISWGNKEGLAFEPDIHSHYLTTL-EAWQRGELDQRIDGGESPIEVMERQKQAMNYILSKSDEEKVLICMHGRAIRILVCWMLGYPLQLMESFGH-SNLGLYV 182
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: A0A5B8V3V2_9SPHI (Histidine phosphatase family protein n=1 Tax=Mucilaginibacter ginsenosidivorans TaxID=398053 RepID=A0A5B8V3V2_9SPHI) HSP 1 Score: 66.2 bits (160), Expect = 1.420e-8 Identity = 41/116 (35.34%), Postives = 64/116 (55.17%), Query Frame = 3
Query: 231 RVEGLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFDRAAKDGESLIEVEARSRAAVDAVLDQGKELNLIVS-HGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYIVEVRRSG 575
++EGLDEL+WG LEGQ + L ++Q W DG D + GES EV+AR A++ ++ + +E N++V HGR +R+L+ L G +T M P+ + +V G
Sbjct: 77 KLEGLDELAWGVLEGQPSTPANKAAFLKLIRQ-WLDGKLDSKFEGGESPNEVKARQLKALEIIMSRPEEKNVLVCMHGRAMRLLLCVLLG---KPLTEMESFPHQNLVLYKVTWDG 188
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: A0A2T3HLC0_9SPHI (Histidine phosphatase family protein n=1 Tax=Pedobacter yulinensis TaxID=2126353 RepID=A0A2T3HLC0_9SPHI) HSP 1 Score: 65.9 bits (159), Expect = 2.070e-8 Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 3
Query: 213 AQVRVRRVEGLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFDRAAKDGESLIEVEARSRAAVDAVLDQGKELNLIVS-HGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYIVEVRRSG 575
A + +++ GLDEL+WGE EGQ E + L + W +G +D K GES EV R + A+ + +E ++V HGR LRIL+ L+G ++QM + T + V SG
Sbjct: 71 AGIPWQQLSGLDELAWGEWEGQP-NTEEAREVFRQLVEEWLNGNYDARLKGGESPQEVAGRLQEALQTIAAAAEEKTVLVCMHGRALRILLCLLSGKPLNQMAEFA---HANTILYRVSLSG 188
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: H8KQQ2_SOLCM (Fructose-2,6-bisphosphatase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) TaxID=929556 RepID=H8KQQ2_SOLCM) HSP 1 Score: 65.9 bits (159), Expect = 2.820e-8 Identity = 40/93 (43.01%), Postives = 48/93 (51.61%), Query Frame = 3
Query: 240 GLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFDRAAKDGESLIEVEARSRAAVDAVLDQGKELN-LIVSHGRTLRILMLSLTGLGMDQM 515
G DEL WGE EG+ Y E QS A+ AW G +D GES +EV R A+D VL Q E LI HGR +RIL+ L + M
Sbjct: 101 GFDELDWGENEGKPYHSEVVQS-FTAVTDAWTSGQYDVRFTGGESPLEVSKRQLEAIDHVLSQENEKQVLICMHGRAMRILLCGLLQIEFKHM 192
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: A0A4R3KTJ8_9SPHI (Putative phosphoglycerate mutase n=1 Tax=Anseongella ginsenosidimutans TaxID=496056 RepID=A0A4R3KTJ8_9SPHI) HSP 1 Score: 64.3 bits (155), Expect = 6.840e-8 Identity = 38/120 (31.67%), Postives = 62/120 (51.67%), Query Frame = 3
Query: 219 VRVRRVEGLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFDRAAKDGESLIEVEARSRAAVDAVLDQGKELNLIVS-HGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYIVEVRRSG 575
+ ++ GLDEL WG EGQD + + +Q W G ++ A GES ++V AR A+ +L + E ++V HGR +RILM LTG +++ M + P+ + ++ G
Sbjct: 75 IAWEQLPGLDELDWGNNEGQDAGSDTMKEFYNVAEQ-WARGAYEVAIPGGESALDVAARQEEALQHMLSRENEKTVLVCMHGRAMRILMCRLTG---SELSEMDRFPHQNLSLYKLSFDG 190
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Match: UPI001E2BEDCC (histidine phosphatase family protein n=1 Tax=Pedobacter sp. MC2016-14 TaxID=2897327 RepID=UPI001E2BEDCC) HSP 1 Score: 64.3 bits (155), Expect = 6.960e-8 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 3
Query: 231 RVEGLDELSWGELEGQDYKVEPFQSRLAALKQAWDDGIFD-RAAKDGESLIEVEARSRAAVDAVLDQGKE-LNLIVSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYIVEVRRSGPE 581
++ GLDEL+WGE EGQ E + L + W G +D + A GES EV R + AV +L +E L L+ HGR +R+L+ LTG ++MG P+ T + ++ +G E
Sbjct: 77 QLSGLDELAWGEWEGQPTS-ENALAIFRGLVEQWQHGYYDAKFAGGGESPNEVAIRLKEAVAHILSHTEEKLVLVCMHGRAMRLLLCILTG---KPFSDMGFFPHQNTTLYKIALNGDE 191 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig680.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig680.42.1 >prot_P-littoralis_Contig680.42.1 ID=prot_P-littoralis_Contig680.42.1|Name=mRNA_P-littoralis_Contig680.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=204bp MRVAENNDACVRRAQENGLVPSSASPSSSFSPSLAAADMASTSTTGKASSback to top mRNA from alignment at P-littoralis_Contig680:152311..157982- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig680.42.1 ID=mRNA_P-littoralis_Contig680.42.1|Name=mRNA_P-littoralis_Contig680.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5672bp|location=Sequence derived from alignment at P-littoralis_Contig680:152311..157982- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig680:152311..157982- >mRNA_P-littoralis_Contig680.42.1 ID=mRNA_P-littoralis_Contig680.42.1|Name=mRNA_P-littoralis_Contig680.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=612bp|location=Sequence derived from alignment at P-littoralis_Contig680:152311..157982- (Pylaiella littoralis U1_48)back to top |